BLASTX nr result
ID: Atropa21_contig00024584
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00024584 (590 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006363188.1| PREDICTED: nucleolar complex protein 2 homol... 101 2e-19 ref|XP_004232640.1| PREDICTED: nucleolar complex protein 2 homol... 96 7e-18 ref|XP_002297661.2| hypothetical protein POPTR_0001s05030g [Popu... 61 2e-07 ref|XP_006386072.1| hypothetical protein POPTR_0003s21740g [Popu... 57 4e-06 gb|ABG37664.1| unknown [Populus trichocarpa] 57 4e-06 >ref|XP_006363188.1| PREDICTED: nucleolar complex protein 2 homolog [Solanum tuberosum] Length = 747 Score = 101 bits (251), Expect = 2e-19 Identities = 62/130 (47%), Positives = 67/130 (51%) Frame = +3 Query: 3 LVGQDSSAYRSRITESDENDDGEDSKGDAVFSSSWLPAGTPKAXXXXXXXXXXXXXXXXX 182 LVGQDSSA+ S+ITESDE+DDGEDSKGDAVFSSSWLPAGTPK Sbjct: 619 LVGQDSSAFGSKITESDEDDDGEDSKGDAVFSSSWLPAGTPK-DEESTEEKQQKKKRRKD 677 Query: 183 XXXXXAFDEDIIEDFIXXXXXXXXXXXXAPSDEEVSVXXXXXXXXXXXXXXXXXXXXXXX 362 AFDEDI+EDFI APSDEE S+ Sbjct: 678 QQDETAFDEDIVEDFILSSDDEEGSLSDAPSDEEASIKQKPSKAPSKKKGKTHRRKNKKR 737 Query: 363 XXSNQVAPAV 392 SNQVA AV Sbjct: 738 KQSNQVASAV 747 >ref|XP_004232640.1| PREDICTED: nucleolar complex protein 2 homolog [Solanum lycopersicum] Length = 750 Score = 95.9 bits (237), Expect = 7e-18 Identities = 54/97 (55%), Positives = 59/97 (60%) Frame = +3 Query: 3 LVGQDSSAYRSRITESDENDDGEDSKGDAVFSSSWLPAGTPKAXXXXXXXXXXXXXXXXX 182 LVGQDSSA+ S+ITESDE+DD EDSKGDAVFSSSWLPAGTPK Sbjct: 622 LVGQDSSAFGSKITESDEDDDVEDSKGDAVFSSSWLPAGTPK-DEESTEEKQQKKKRRKD 680 Query: 183 XXXXXAFDEDIIEDFIXXXXXXXXXXXXAPSDEEVSV 293 AFDEDI+EDFI APSDEE S+ Sbjct: 681 QQDETAFDEDIVEDFILSSDDEEGSLSDAPSDEEASI 717 >ref|XP_002297661.2| hypothetical protein POPTR_0001s05030g [Populus trichocarpa] gi|550346542|gb|EEE82466.2| hypothetical protein POPTR_0001s05030g [Populus trichocarpa] Length = 780 Score = 61.2 bits (147), Expect = 2e-07 Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 3/79 (3%) Frame = +3 Query: 3 LVGQDSSAYRSRITESDENDDGEDS---KGDAVFSSSWLPAGTPKAXXXXXXXXXXXXXX 173 LVG+ SS +R++I ESDE+DD +D+ KG VFSSSWLP GTP+A Sbjct: 601 LVGEHSSVFRNKIPESDEDDDDDDAANEKGAVVFSSSWLPGGTPEA--KPSKKEKKKKKR 658 Query: 174 XXXXXXXXAFDEDIIEDFI 230 A DED++ED I Sbjct: 659 KAEHQEELASDEDVVEDLI 677 >ref|XP_006386072.1| hypothetical protein POPTR_0003s21740g [Populus trichocarpa] gi|550343725|gb|ERP63869.1| hypothetical protein POPTR_0003s21740g [Populus trichocarpa] Length = 646 Score = 57.0 bits (136), Expect = 4e-06 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +3 Query: 3 LVGQDSSAYRSRITESDENDDGE-DSKGDAVFSSSWLPAGTPKAXXXXXXXXXXXXXXXX 179 LV + SS +R++I ESDE+DD + KG +VFSSSWLP GTPKA Sbjct: 544 LVVKHSSVFRNKIPESDEDDDDAVNEKGASVFSSSWLPGGTPKA--KPSKEEEKKKKRKA 601 Query: 180 XXXXXXAFDEDIIEDFI 230 A DED++ED + Sbjct: 602 EHQEEVALDEDVVEDLV 618 >gb|ABG37664.1| unknown [Populus trichocarpa] Length = 1238 Score = 57.0 bits (136), Expect = 4e-06 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +3 Query: 3 LVGQDSSAYRSRITESDENDDGE-DSKGDAVFSSSWLPAGTPKAXXXXXXXXXXXXXXXX 179 LV + SS +R++I ESDE+DD + KG +VFSSSWLP GTPKA Sbjct: 708 LVVKHSSVFRNKIPESDEDDDDAVNEKGASVFSSSWLPGGTPKA--KPSKEEEKKKKRKA 765 Query: 180 XXXXXXAFDEDIIEDFI 230 A DED++ED + Sbjct: 766 EHQEEVALDEDVVEDLV 782