BLASTX nr result

ID: Atropa21_contig00024584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00024584
         (590 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363188.1| PREDICTED: nucleolar complex protein 2 homol...   101   2e-19
ref|XP_004232640.1| PREDICTED: nucleolar complex protein 2 homol...    96   7e-18
ref|XP_002297661.2| hypothetical protein POPTR_0001s05030g [Popu...    61   2e-07
ref|XP_006386072.1| hypothetical protein POPTR_0003s21740g [Popu...    57   4e-06
gb|ABG37664.1| unknown [Populus trichocarpa]                           57   4e-06

>ref|XP_006363188.1| PREDICTED: nucleolar complex protein 2 homolog [Solanum tuberosum]
          Length = 747

 Score =  101 bits (251), Expect = 2e-19
 Identities = 62/130 (47%), Positives = 67/130 (51%)
 Frame = +3

Query: 3    LVGQDSSAYRSRITESDENDDGEDSKGDAVFSSSWLPAGTPKAXXXXXXXXXXXXXXXXX 182
            LVGQDSSA+ S+ITESDE+DDGEDSKGDAVFSSSWLPAGTPK                  
Sbjct: 619  LVGQDSSAFGSKITESDEDDDGEDSKGDAVFSSSWLPAGTPK-DEESTEEKQQKKKRRKD 677

Query: 183  XXXXXAFDEDIIEDFIXXXXXXXXXXXXAPSDEEVSVXXXXXXXXXXXXXXXXXXXXXXX 362
                 AFDEDI+EDFI            APSDEE S+                       
Sbjct: 678  QQDETAFDEDIVEDFILSSDDEEGSLSDAPSDEEASIKQKPSKAPSKKKGKTHRRKNKKR 737

Query: 363  XXSNQVAPAV 392
              SNQVA AV
Sbjct: 738  KQSNQVASAV 747


>ref|XP_004232640.1| PREDICTED: nucleolar complex protein 2 homolog [Solanum
           lycopersicum]
          Length = 750

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 54/97 (55%), Positives = 59/97 (60%)
 Frame = +3

Query: 3   LVGQDSSAYRSRITESDENDDGEDSKGDAVFSSSWLPAGTPKAXXXXXXXXXXXXXXXXX 182
           LVGQDSSA+ S+ITESDE+DD EDSKGDAVFSSSWLPAGTPK                  
Sbjct: 622 LVGQDSSAFGSKITESDEDDDVEDSKGDAVFSSSWLPAGTPK-DEESTEEKQQKKKRRKD 680

Query: 183 XXXXXAFDEDIIEDFIXXXXXXXXXXXXAPSDEEVSV 293
                AFDEDI+EDFI            APSDEE S+
Sbjct: 681 QQDETAFDEDIVEDFILSSDDEEGSLSDAPSDEEASI 717


>ref|XP_002297661.2| hypothetical protein POPTR_0001s05030g [Populus trichocarpa]
           gi|550346542|gb|EEE82466.2| hypothetical protein
           POPTR_0001s05030g [Populus trichocarpa]
          Length = 780

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
 Frame = +3

Query: 3   LVGQDSSAYRSRITESDENDDGEDS---KGDAVFSSSWLPAGTPKAXXXXXXXXXXXXXX 173
           LVG+ SS +R++I ESDE+DD +D+   KG  VFSSSWLP GTP+A              
Sbjct: 601 LVGEHSSVFRNKIPESDEDDDDDDAANEKGAVVFSSSWLPGGTPEA--KPSKKEKKKKKR 658

Query: 174 XXXXXXXXAFDEDIIEDFI 230
                   A DED++ED I
Sbjct: 659 KAEHQEELASDEDVVEDLI 677


>ref|XP_006386072.1| hypothetical protein POPTR_0003s21740g [Populus trichocarpa]
           gi|550343725|gb|ERP63869.1| hypothetical protein
           POPTR_0003s21740g [Populus trichocarpa]
          Length = 646

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   LVGQDSSAYRSRITESDENDDGE-DSKGDAVFSSSWLPAGTPKAXXXXXXXXXXXXXXXX 179
           LV + SS +R++I ESDE+DD   + KG +VFSSSWLP GTPKA                
Sbjct: 544 LVVKHSSVFRNKIPESDEDDDDAVNEKGASVFSSSWLPGGTPKA--KPSKEEEKKKKRKA 601

Query: 180 XXXXXXAFDEDIIEDFI 230
                 A DED++ED +
Sbjct: 602 EHQEEVALDEDVVEDLV 618


>gb|ABG37664.1| unknown [Populus trichocarpa]
          Length = 1238

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   LVGQDSSAYRSRITESDENDDGE-DSKGDAVFSSSWLPAGTPKAXXXXXXXXXXXXXXXX 179
           LV + SS +R++I ESDE+DD   + KG +VFSSSWLP GTPKA                
Sbjct: 708 LVVKHSSVFRNKIPESDEDDDDAVNEKGASVFSSSWLPGGTPKA--KPSKEEEKKKKRKA 765

Query: 180 XXXXXXAFDEDIIEDFI 230
                 A DED++ED +
Sbjct: 766 EHQEEVALDEDVVEDLV 782


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