BLASTX nr result

ID: Atropa21_contig00024445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00024445
         (696 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250050.1| PREDICTED: lysine-specific histone demethyla...   162   9e-38
ref|XP_006361683.1| PREDICTED: lysine-specific histone demethyla...   158   1e-36

>ref|XP_004250050.1| PREDICTED: lysine-specific histone demethylase 1 homolog 3-like
            [Solanum lycopersicum]
          Length = 1004

 Score =  162 bits (410), Expect = 9e-38
 Identities = 82/108 (75%), Positives = 92/108 (85%)
 Frame = +3

Query: 3    IPLTNVDLEPKPVCTIGSVASPSLNIGVNDNMGSKSVGSSSVYLLPNASIGDKFEGNIGS 182
            IPLTN+DLEPKPVC IGS ASPSLN+ VND+M SKSVGSS V+LL NASIGDKFEGN GS
Sbjct: 883  IPLTNLDLEPKPVCAIGSAASPSLNVRVNDDMESKSVGSS-VHLLHNASIGDKFEGNFGS 941

Query: 183  STTAPILNAGGQTGSNSNAPSYPRSTYDDSTNTCAPPSSGNSAN*HTS 326
            ST AP+LN GG TGSNS+ P YPR+TYDDST+TC PP +GN A+ HTS
Sbjct: 942  ST-APLLNVGGNTGSNSDGPMYPRNTYDDSTDTCVPPITGNLASQHTS 988


>ref|XP_006361683.1| PREDICTED: lysine-specific histone demethylase 1 homolog 3-like
            [Solanum tuberosum]
          Length = 996

 Score =  158 bits (400), Expect = 1e-36
 Identities = 84/108 (77%), Positives = 92/108 (85%)
 Frame = +3

Query: 3    IPLTNVDLEPKPVCTIGSVASPSLNIGVNDNMGSKSVGSSSVYLLPNASIGDKFEGNIGS 182
            I LTNVDLEPKPVC IGSVASPSLNI VND+MGSKSVG SSV+LL NASIGDKFEGN GS
Sbjct: 875  IHLTNVDLEPKPVCAIGSVASPSLNIRVNDDMGSKSVG-SSVHLLHNASIGDKFEGNFGS 933

Query: 183  STTAPILNAGGQTGSNSNAPSYPRSTYDDSTNTCAPPSSGNSAN*HTS 326
            S  AP+LN GG TGSNS+ P Y RSTYDDST+T APP++GN A+ HTS
Sbjct: 934  S-AAPLLNVGGNTGSNSDGPIYLRSTYDDSTDTFAPPTTGNLASQHTS 980


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