BLASTX nr result
ID: Atropa21_contig00024389
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00024389
(1052 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 206 1e-70
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 200 1e-68
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 200 2e-68
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 202 4e-68
gb|ADB85304.1| putative retrotransposon protein [Phyllostachys e... 204 1e-64
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 179 6e-61
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 182 2e-59
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 182 2e-59
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group] 184 2e-57
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 197 3e-57
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [... 189 9e-57
ref|XP_004296329.1| PREDICTED: uncharacterized protein LOC101295... 186 2e-56
ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] g... 188 5e-56
gb|ABD78322.1| polyprotein [Primula vulgaris] 191 6e-56
gb|ABD78329.1| polyprotein [Primula vulgaris] 191 6e-56
gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japo... 193 7e-56
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 202 7e-56
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 183 8e-56
dbj|BAG72154.1| hypothetical protein [Lotus japonicus] 187 5e-55
dbj|BAG72151.1| hypothetical protein [Lotus japonicus] 187 5e-55
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 206 bits (525), Expect(4) = 1e-70
Identities = 102/217 (47%), Positives = 144/217 (66%), Gaps = 4/217 (1%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY--- 759
KLHG+P IVTDRD +F S F+Q++FKS +L S+AYHP +DGQTE++N+CLESY
Sbjct: 662 KLHGMPIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESYLRC 721
Query: 758 -GVF*SKALLKWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
+ W+ LAEWW N+ +HT ++ TPF+ALYG++PPQIS S+P A V
Sbjct: 722 MTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQEARVT 781
Query: 581 LTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNLK 402
L ++ +L+ +++ AQ M +AD NR++ L+VGD+VY+KLQPYRQ +LK
Sbjct: 782 LEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGIRGSLK 841
Query: 401 MSAKYYGPYKILEKIGMVAYRLDFPATS*STLSSMFH 291
+ KYYGP+K+LEK+G VAYRL P + + +FH
Sbjct: 842 LRGKYYGPFKVLEKVGAVAYRLQLPEE--AAIHPVFH 876
Score = 50.1 bits (118), Expect(4) = 1e-70
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSA-EVTDLFLQEI 925
LP S K+ IL+V+DRLTKY HF++L HPY+ EV +F+ I
Sbjct: 618 LPKSKGKDVILVVVDRLTKYAHFIALSHPYTVEEVVQVFMDNI 660
Score = 41.6 bits (96), Expect(4) = 1e-70
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLPTCGDDG 223
IH VFHVSQLKK +G +P+ LP G DG
Sbjct: 871 IHPVFHVSQLKKHLGTHAVPMPNLPAVGPDG 901
Score = 38.5 bits (88), Expect(4) = 1e-70
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = -2
Query: 220 RILMQPLAILHQRLVNVNNAVTVKVLMHWSNLSAKEATLED 98
+I +P+A+L +R++ NN + L+ WSNL+ EAT ED
Sbjct: 902 QIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWED 942
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 200 bits (509), Expect(4) = 1e-68
Identities = 98/221 (44%), Positives = 148/221 (66%), Gaps = 8/221 (3%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESYGVF 750
+LHG+P I+TDRD IF S+ +Q++FKS+ +L S++YHP +DGQTE++N+CLESY
Sbjct: 1293 RLHGMPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESY--- 1349
Query: 749 *SKALL--------KWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSP 594
+++ WL LAEWW N+ +HT+++ TPF+ALYG+ PPQI+ S+P +
Sbjct: 1350 -LRSMTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEE 1408
Query: 593 AGVCLTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANC 414
A V + ++ +L+ +L +AQ + +AD NRS+ L VGD+VY+KLQPYRQ
Sbjct: 1409 ARVTIEQKDAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIR 1468
Query: 413 KNLKMSAKYYGPYKILEKIGMVAYRLDFPATS*STLSSMFH 291
+LK+ +K+YGP+KI+EK+G VAY+L P S + +FH
Sbjct: 1469 GSLKLRSKFYGPFKIMEKVGRVAYKLQLPEG--SNIHPVFH 1507
Score = 51.6 bits (122), Expect(4) = 1e-68
Identities = 23/43 (53%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSAE-VTDLFLQEI 925
LP S K+ IL+V+DRLTKY HF+++ HPY+ E V +LF+ I
Sbjct: 1249 LPKSNGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNI 1291
Score = 44.7 bits (104), Expect(4) = 1e-68
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLPTCGDDG 223
IH VFHVSQLKK IG +P+A LP+ G DG
Sbjct: 1502 IHPVFHVSQLKKHIGSRAVPMANLPSVGPDG 1532
Score = 33.1 bits (74), Expect(4) = 1e-68
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 220 RILMQPLAILHQRLVNVNNAVTVKVLMHWSNLSAKEATLED 98
+I +P+A+L +R++ + L+ W NLS EAT ED
Sbjct: 1533 QIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWED 1573
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 200 bits (509), Expect(4) = 2e-68
Identities = 96/205 (46%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY--- 759
KLHG+P I+TDRD IF S +Q++FK++ KL S+AYHP DGQTE++N+CLESY
Sbjct: 1182 KLHGMPMVIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRN 1241
Query: 758 -GVF*SKALLKWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
WL LAEWW N+ HT ++ TPF+A+YG++PPQI+ S+P + A V
Sbjct: 1242 MTFQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPPQINEFSVPCNISEEARVT 1301
Query: 581 LTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNLK 402
+ +L++L+ +L AQ M FAD NR++ L+VGD+VY+KL+PYRQ+ +LK
Sbjct: 1302 IEEKEAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLK 1361
Query: 401 MSAKYYGPYKILEKIGMVAYRLDFP 327
+ +K+YGP+K+L+KIG +AY+L P
Sbjct: 1362 LRSKFYGPFKVLQKIGQLAYKLQLP 1386
Score = 49.3 bits (116), Expect(4) = 2e-68
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSAE-VTDLFLQEI 925
LP S K+ IL+V+DRLTKY HF++L HPY E V + F+ I
Sbjct: 1138 LPKSQGKDVILVVVDRLTKYAHFIALAHPYDVEQVVEAFMNNI 1180
Score = 43.1 bits (100), Expect(4) = 2e-68
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLPTCGDDG 223
IH VFHVSQLKK +G IP++ LP+ G DG
Sbjct: 1391 IHPVFHVSQLKKHLGKHAIPMSNLPSVGPDG 1421
Score = 36.6 bits (83), Expect(4) = 2e-68
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -2
Query: 220 RILMQPLAILHQRLVNVNNAVTVKVLMHWSNLSAKEATLEDWVISRVSFLSLS 62
+I +PLA+L +R+V + L+ W NLS EAT ED + + F S +
Sbjct: 1422 QIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQAMFPSFN 1474
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 202 bits (513), Expect(4) = 4e-68
Identities = 96/205 (46%), Positives = 141/205 (68%), Gaps = 4/205 (1%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY--- 759
KLHG+P IVTDRD +F S F+Q++FK+ KL S+A+HP +DGQTE++N+CLESY
Sbjct: 1318 KLHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRS 1377
Query: 758 -GVF*SKALLKWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
+ WL LAEWW N+ +HT+++ TPF+ALYG+ PPQI+ ++P + A V
Sbjct: 1378 MTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQITEFAIPCNMSEEARVT 1437
Query: 581 LTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNLK 402
L +L +L+ ++ +AQ + +AD RS+ L++GD+VY+KLQPYRQ M +LK
Sbjct: 1438 LEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLK 1497
Query: 401 MSAKYYGPYKILEKIGMVAYRLDFP 327
+ +KYYGP+K++EK+G VAY+L P
Sbjct: 1498 LRSKYYGPFKVIEKMGAVAYKLQLP 1522
Score = 51.2 bits (121), Expect(4) = 4e-68
Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSAE-VTDLFLQEI 925
LP S K+ IL+V+DRLTKY HFL+L HPY+ E V +F+ I
Sbjct: 1274 LPKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNI 1316
Score = 42.0 bits (97), Expect(4) = 4e-68
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLPTCGDDG 223
IH VFHVSQLKK +G IP+ LP G DG
Sbjct: 1527 IHPVFHVSQLKKHLGARAIPMPNLPAIGPDG 1557
Score = 33.1 bits (74), Expect(4) = 4e-68
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 220 RILMQPLAILHQRLVNVNNAVTVKVLMHWSNLSAKEATLED 98
+I +P A+L +R++ +N + L+ W NL+ EAT ED
Sbjct: 1558 QIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWED 1598
>gb|ADB85304.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 335
Score = 204 bits (519), Expect(3) = 1e-64
Identities = 98/205 (47%), Positives = 138/205 (67%), Gaps = 4/205 (1%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY--- 759
KLHG+P TIVTDRD IF S +Q++FK L L +S+AYHP +D QTE++N+CLE+Y
Sbjct: 58 KLHGMPITIVTDRDRIFTSHLFQEIFKMLKVTLRLSTAYHPQTDRQTERVNQCLEAYLRS 117
Query: 758 -GVF*SKALLKWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
+ + WL LAEWW N+ +HT+LK TPF+ALYG+ PPQ+ S+P + A +
Sbjct: 118 MTFQEPREWMNWLTLAEWWYNTTYHTSLKVTPFQALYGYPPPQVGELSIPCNVSEEARIT 177
Query: 581 LTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNLK 402
+ +L QL+ NL AQD M +AD +R++ QVGD+VY+K+QPYR +LK
Sbjct: 178 VEQKEQMLEQLKSNLHNAQDRMKHYADKSRTERQFQVGDMVYLKMQPYRLTAFGLRGSLK 237
Query: 401 MSAKYYGPYKILEKIGMVAYRLDFP 327
+ +K+YGP+++LEK+G VAYRL P
Sbjct: 238 LRSKFYGPFRVLEKLGTVAYRLQLP 262
Score = 51.2 bits (121), Expect(3) = 1e-64
Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSAE-VTDLFLQEI 925
LP S K IL+V+DRLTKY HFLSL HPYS + V +F+ I
Sbjct: 14 LPKSRGKEVILVVVDRLTKYAHFLSLAHPYSVQHVVQVFMDNI 56
Score = 40.4 bits (93), Expect(3) = 1e-64
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -3
Query: 324 YIVIHLVFHVSQLKKRIGPGIIPLAQLPTCGDDG 223
+ +IH VFHV+QLKK +G +PL LP G++G
Sbjct: 264 HTLIHPVFHVNQLKKHLGSHAVPLTGLPLVGENG 297
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 179 bits (453), Expect(4) = 6e-61
Identities = 97/220 (44%), Positives = 139/220 (63%), Gaps = 4/220 (1%)
Frame = -1
Query: 938 SYKKLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY 759
+Y K HGLP IV+DRD IF S+ W+ +F+ G KL SSAYHP +DGQTE++N+CLE+Y
Sbjct: 1015 NYYKHHGLPAVIVSDRDRIFTSQTWKDVFEKAGVKLHFSSAYHPQTDGQTERVNQCLENY 1074
Query: 758 -GVF*SKALLKW---LPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPA 591
KW L A+WW N++ HTTL TP++AL+G PP ++ L S + A
Sbjct: 1075 LRCMTFTKPKKWKSLLAYAKWWYNTSFHTTLGMTPYQALHGVPPPLLAESFLSPSLFTDA 1134
Query: 590 GVCLTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCK 411
+ ++ +L +AQ M FAD NR++ VL VGD+VY+K+QPYR +
Sbjct: 1135 RNKAEAKSVITAAIKSSLLKAQARMKHFADMNRTERVLTVGDMVYLKMQPYRHNSLGLHS 1194
Query: 410 NLKMSAKYYGPYKILEKIGMVAYRLDFPATS*STLSSMFH 291
+LK+ +KYYGP+++LE+IG VAY+L PA+ S + +FH
Sbjct: 1195 SLKLHSKYYGPFRVLERIGSVAYKLLLPAS--SQIHPVFH 1232
Score = 43.9 bits (102), Expect(4) = 6e-61
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSAE 952
LP S +K+ I +++DR TKY HF++L HP++A+
Sbjct: 974 LPKSDNKDVIWVIVDRFTKYAHFVALSHPFTAD 1006
Score = 42.0 bits (97), Expect(4) = 6e-61
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLPTCGDDG 223
IH VFHVSQLKK IGP ++P LP D+G
Sbjct: 1227 IHPVFHVSQLKKHIGPKVVPEPGLPLTDDNG 1257
Score = 39.3 bits (90), Expect(4) = 6e-61
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -2
Query: 217 ILMQPLAILHQRLVNVNNAVTVKVLMHWSNLSAKEATLED 98
IL QP A+L +RL+ NNA V+ + W+NL AT ED
Sbjct: 1259 ILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAATWED 1298
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 182 bits (461), Expect(4) = 2e-59
Identities = 96/219 (43%), Positives = 138/219 (63%), Gaps = 4/219 (1%)
Frame = -1
Query: 935 YKKLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY- 759
+ KLHGLP IV+DRD IF S W+++F+ G KL SSAYHP +DGQ+E++N+CLE+Y
Sbjct: 571 FYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYL 630
Query: 758 GVF*SKALLKW---LPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAG 588
S KW LP AEWW N+ HT+L +P++AL+G PP ++ LP S
Sbjct: 631 RCMTSSKPRKWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGER 690
Query: 587 VCLTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKN 408
LL ++ +L +AQ M FAD +R + L+VGD+VY+K+QPYR + +
Sbjct: 691 NKQEAKAALLETIKSHLVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYRHNSLGLHSS 750
Query: 407 LKMSAKYYGPYKILEKIGMVAYRLDFPATS*STLSSMFH 291
LK+ ++YYGP+++LE+IG VAY+L P T S + +FH
Sbjct: 751 LKLHSRYYGPFRVLERIGSVAYKLLLPVT--SQIHHVFH 787
Score = 42.0 bits (97), Expect(4) = 2e-59
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSAE 952
LP S K+ I +++DR TKY HF+ L HP++A+
Sbjct: 529 LPKSEGKDVIWVIVDRFTKYAHFIPLSHPFTAD 561
Score = 41.2 bits (95), Expect(4) = 2e-59
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = -2
Query: 220 RILMQPLAILHQRLVNVNNAVTVKVLMHWSNLSAKEATLED 98
RIL PLA+L +RL+ NN V+ +HW+NL AT ED
Sbjct: 813 RILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWED 853
Score = 33.9 bits (76), Expect(4) = 2e-59
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLPTCGDDG 223
IH VFHVSQLKK +G +P LP +G
Sbjct: 782 IHHVFHVSQLKKHLGSRAVPEQGLPLIDAEG 812
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 182 bits (461), Expect(4) = 2e-59
Identities = 96/219 (43%), Positives = 138/219 (63%), Gaps = 4/219 (1%)
Frame = -1
Query: 935 YKKLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY- 759
+ KLHGLP IV+DRD IF S W+++F+ G KL SSAYHP +DGQ+E++N+CLE+Y
Sbjct: 350 FYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYL 409
Query: 758 GVF*SKALLKW---LPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAG 588
S KW LP AEWW N+ HT+L +P++AL+G PP ++ LP S
Sbjct: 410 RCMTSSKPRKWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGER 469
Query: 587 VCLTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKN 408
LL ++ +L +AQ M FAD +R + L+VGD+VY+K+QPYR + +
Sbjct: 470 NKQEAKAALLETIKSHLVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYRHNSLGLHSS 529
Query: 407 LKMSAKYYGPYKILEKIGMVAYRLDFPATS*STLSSMFH 291
LK+ ++YYGP+++LE+IG VAY+L P T S + +FH
Sbjct: 530 LKLHSRYYGPFRVLERIGSVAYKLLLPVT--SQIHHVFH 566
Score = 42.0 bits (97), Expect(4) = 2e-59
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSAE 952
LP S K+ I +++DR TKY HF+ L HP++A+
Sbjct: 308 LPKSEGKDVIWVIVDRFTKYAHFIPLSHPFTAD 340
Score = 41.2 bits (95), Expect(4) = 2e-59
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = -2
Query: 220 RILMQPLAILHQRLVNVNNAVTVKVLMHWSNLSAKEATLED 98
RIL PLA+L +RL+ NN V+ +HW+NL AT ED
Sbjct: 592 RILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWED 632
Score = 33.9 bits (76), Expect(4) = 2e-59
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLPTCGDDG 223
IH VFHVSQLKK +G +P LP +G
Sbjct: 561 IHHVFHVSQLKKHLGSRAVPEQGLPLIDAEG 591
>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 184 bits (468), Expect(4) = 2e-57
Identities = 103/218 (47%), Positives = 138/218 (63%), Gaps = 5/218 (2%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY-GV 753
KLHGLP+TIV+DRD IF S+ W+QLF GTKL SSAYHP SDGQTE++N+CLE Y
Sbjct: 1231 KLHGLPQTIVSDRDKIFTSQLWEQLFLRAGTKLHYSSAYHPQSDGQTERVNQCLEIYLRC 1290
Query: 752 F*SKALLK---WLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
F K WL LAE+W NS +H++L +TPFE LYG+ P + S P
Sbjct: 1291 FVHSTPSKWYSWLHLAEYWYNSTYHSSLGTTPFEVLYGYPPNHFGISS--RDCAIPELSV 1348
Query: 581 LTH*RNLLHQL-RKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNL 405
R + QL +++L +AQ M FAD RS +GD VY+KLQPY Q+ +A N
Sbjct: 1349 WLRDRKFMQQLVQQHLHRAQQQMKHFADKKRSFRQFTIGDWVYLKLQPYVQSSVAPRANH 1408
Query: 404 KMSAKYYGPYKILEKIGMVAYRLDFPATS*STLSSMFH 291
K++ KYYGP+++++K+G VAY+L P T S++ +FH
Sbjct: 1409 KLAFKYYGPFQVIDKLGTVAYKLQLPET--SSVHPVFH 1444
Score = 44.3 bits (103), Expect(4) = 2e-57
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSA 955
LP S N IL+V+DR +KY HF++LKHP++A
Sbjct: 1187 LPKSAGYNCILVVVDRFSKYAHFVALKHPFTA 1218
Score = 41.2 bits (95), Expect(4) = 2e-57
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = -2
Query: 205 PLAILHQRLVNVNNAVTVKVLMHWSNLSAKEATLED 98
PLAIL QRL N+V +VL+HWS+ ++AT ED
Sbjct: 1472 PLAILDQRLAKKGNSVITQVLIHWSHTVPEQATWED 1507
Score = 21.9 bits (45), Expect(4) = 2e-57
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLPT 238
+H VFHVS LK G QLP+
Sbjct: 1439 VHPVFHVSLLKPAKGFTQPAFLQLPS 1464
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 197 bits (500), Expect(3) = 3e-57
Identities = 103/206 (50%), Positives = 136/206 (66%), Gaps = 5/206 (2%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESYGVF 750
KLHGLP +IVTDRD F S FW++LFK GT L SSAYHP +DGQTE +N+ +E Y
Sbjct: 1173 KLHGLPNSIVTDRDPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRC 1232
Query: 749 *S----KALLKWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQ-SPAGV 585
S K +KWLPLAEWW N+N H + K +PFE++YG+ PP++ + P +TQ
Sbjct: 1233 FSGDKPKGWVKWLPLAEWWYNTNIHASTKLSPFESVYGYPPPKL-IPYTPGTTQLQEVEN 1291
Query: 584 CLTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNL 405
L ++ LR NLQ AQD M FAD + +GDLVY++LQPY+Q + +NL
Sbjct: 1292 TLKTRDEIIRILRTNLQLAQDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNL 1351
Query: 404 KMSAKYYGPYKILEKIGMVAYRLDFP 327
K+S ++YGPY++LEKIG VAYRL+ P
Sbjct: 1352 KLSPRFYGPYRVLEKIGTVAYRLELP 1377
Score = 44.3 bits (103), Expect(3) = 3e-57
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSA-EVTDLFLQEI 925
LP+S + I++V+DRL+KY HF+ + HPY+A ++ +FL I
Sbjct: 1129 LPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANI 1171
Score = 29.6 bits (65), Expect(3) = 3e-57
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLPTCGDDGIV 217
IH VFHVS LK+++G + LP DG++
Sbjct: 1382 IHPVFHVSCLKEKLGERHQLVVTLPPXDKDGVI 1414
>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 189 bits (481), Expect(3) = 9e-57
Identities = 100/218 (45%), Positives = 144/218 (66%), Gaps = 5/218 (2%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY-GV 753
KLHG P T+V+DRD IF+S FW +LFK GT L S+AYHP +DGQTE +NRCLESY
Sbjct: 1323 KLHGFPNTLVSDRDRIFLSGFWSELFKLQGTGLQKSTAYHPQTDGQTEVVNRCLESYLRC 1382
Query: 752 F*SK---ALLKWLPLAEWWCNSNHHTTLKSTPFEALYGFTPP-QISMGSLPHSTQSPAGV 585
F + + +WLP AE+W N+++H+ K+TPF+A+YG PP + G +P + +
Sbjct: 1383 FAGRRPTSWFQWLPWAEYWYNTSYHSATKTTPFQAVYGREPPVLLRYGDIP-TNNANVEE 1441
Query: 584 CLTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNL 405
L +L +LR+NL+ AQ M AD +R D ++ + VY+KL+PYRQ+ +A+ KN
Sbjct: 1442 LLKDRDGMLVELRENLEIAQAQMKKAADKSRRDVAFEIDEWVYLKLRPYRQSSVAHRKNE 1501
Query: 404 KMSAKYYGPYKILEKIGMVAYRLDFPATS*STLSSMFH 291
K+S +Y+GP+K+L +IG VAY+L P ST+ +FH
Sbjct: 1502 KLSQRYFGPFKVLHRIGQVAYKLQLPEH--STIHPVFH 1537
Score = 50.4 bits (119), Expect(3) = 9e-57
Identities = 22/43 (51%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSAE-VTDLFLQEI 925
LPSS N IL+V+DRL+KY HF+ LKHP++A+ V + F++++
Sbjct: 1279 LPSSNRFNCILVVVDRLSKYSHFIPLKHPFTAKTVVEAFIRDV 1321
Score = 29.3 bits (64), Expect(3) = 9e-57
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIP 256
IH VFHVSQLK+ + P P
Sbjct: 1532 IHPVFHVSQLKRAVPPSFTP 1551
>ref|XP_004296329.1| PREDICTED: uncharacterized protein LOC101295505 [Fragaria vesca
subsp. vesca]
Length = 2814
Score = 186 bits (472), Expect(4) = 2e-56
Identities = 105/218 (48%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY--G 756
KLHG+P I++DRD IF+S FW+ F GTKL+ SSAYHP SDGQTE LNR LE Y
Sbjct: 1839 KLHGMPDNIISDRDPIFMSLFWEAFFALQGTKLSKSSAYHPQSDGQTENLNRTLEQYLRC 1898
Query: 755 VF*SKAL--LKWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQ-SPAGV 585
V K +K L AEWW NS +HT + +PFEA YG+ PP + + +P ST + A
Sbjct: 1899 VVGEKPQDWVKCLAWAEWWYNSAYHTAIAMSPFEARYGYPPPPV-IPYIPGSTVIAQADE 1957
Query: 584 CLTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNL 405
L LL L++NLQ+AQ M F D ++ +VGD+VY+KLQPY+Q M
Sbjct: 1958 QLRKREELLALLKRNLQRAQARMKHFHDKRHTERSFEVGDMVYLKLQPYKQHSMQRGVFN 2017
Query: 404 KMSAKYYGPYKILEKIGMVAYRLDFPATS*STLSSMFH 291
K+SA+YYGP+++LEKIG VAY+L P T + + ++FH
Sbjct: 2018 KLSARYYGPFEVLEKIGSVAYKLKLPPT--ARIHNVFH 2053
Score = 44.3 bits (103), Expect(4) = 2e-56
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPY-SAEVTDLFLQEI 925
LP S K + +++D+LTKY HF+ L HPY +A + +F++EI
Sbjct: 1795 LPKSEGKTTVWVIVDKLTKYAHFIPLAHPYTAATLAQIFVKEI 1837
Score = 30.4 bits (67), Expect(4) = 2e-56
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLP 241
IH VFHVS LKK++G LA LP
Sbjct: 2048 IHNVFHVSLLKKKLGDQTPVLADLP 2072
Score = 27.7 bits (60), Expect(4) = 2e-56
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 205 PLAILHQRLVNVNNAVTVKVLMHWSNLSAKEATLE 101
P A+ +R+V A + L+HW + +EAT E
Sbjct: 2084 PAAVFGRRMVKKAGAAATQWLVHWIGTTPEEATWE 2118
>ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group]
gi|255678117|dbj|BAH94093.1| Os08g0123950, partial [Oryza
sativa Japonica Group]
Length = 783
Score = 188 bits (477), Expect(3) = 5e-56
Identities = 106/218 (48%), Positives = 142/218 (65%), Gaps = 5/218 (2%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY-GV 753
KLHGLP+ I++DRD IF S+ W+QLF GTKL SSAYHP SDGQTE+ N+CLE Y
Sbjct: 416 KLHGLPQIIISDRDKIFTSQLWEQLFLRSGTKLHYSSAYHPQSDGQTERGNQCLEIYLKC 475
Query: 752 F*SKALLK---WLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
F A K WL LAE+W N+++H+T+ TPFEALYG+ P G + +
Sbjct: 476 FVQSAPSKWPSWLHLAEYWYNNSYHSTIDRTPFEALYGYPPRH--FGISIRDCDNSELIT 533
Query: 581 LTH*RNLLHQL-RKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNL 405
R L+ QL +++L +AQ M +FAD RS QVG+ VY+KLQPY Q+ +A N
Sbjct: 534 WMQDRKLMQQLVQQHLHRAQQQMKLFADKKRSFRQFQVGEWVYLKLQPYVQSSVAPRANH 593
Query: 404 KMSAKYYGPYKILEKIGMVAYRLDFPATS*STLSSMFH 291
K++ KY+GP++ILEK+G VAY+L PAT S++ +FH
Sbjct: 594 KLAFKYFGPFQILEKLGTVAYKLQLPAT--SSIHPVFH 629
Score = 46.2 bits (108), Expect(3) = 5e-56
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSA-EVTDLFLQEI 925
LP S H N IL+V+D+ +KY HF+ L+HP++A +V F+ +
Sbjct: 372 LPRSSHYNCILVVVDKFSKYSHFIPLRHPFTAIDVAKAFMSNV 414
Score = 32.7 bits (73), Expect(3) = 5e-56
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 205 PLAILHQRLVNVNNAVTVKVLMHWSNLSAKEATLED 98
P+A+L RL N +VL HWS+ +AT ED
Sbjct: 657 PIALLDHRLTKKGNHTVHQVLTHWSDTIPAQATWED 692
>gb|ABD78322.1| polyprotein [Primula vulgaris]
Length = 1359
Score = 191 bits (485), Expect(3) = 6e-56
Identities = 99/208 (47%), Positives = 138/208 (66%), Gaps = 4/208 (1%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY-GV 753
KLHGLPK I++DRD IF S FW++LF LGTKL +S+A+HP +DGQTE +N+ LE+Y
Sbjct: 1095 KLHGLPKKIISDRDTIFTSDFWKELFHLLGTKLLLSTAFHPQTDGQTEIVNKSLETYLRC 1154
Query: 752 F*S---KALLKWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
+ S K KW+ LAE+W NS HT++K PF+ALYG+ PP++S L ++
Sbjct: 1155 YTSQYPKNWAKWIYLAEFWYNSTTHTSIKMPPFKALYGYEPPKLSHYLLSKEHKADIQEL 1214
Query: 581 LTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNLK 402
L ++ L+ N +AQ+ M AD NR D +VGD VY+KLQPYRQ + +N K
Sbjct: 1215 LQTKEEIMQALKTNYLEAQNRMKQNADLNRVDKCYKVGDYVYLKLQPYRQQSVIRRRNQK 1274
Query: 401 MSAKYYGPYKILEKIGMVAYRLDFPATS 318
++ +++GPYKI EK+G VAY+L+ P TS
Sbjct: 1275 LAPRFFGPYKITEKVGAVAYKLELPPTS 1302
Score = 49.3 bits (116), Expect(3) = 6e-56
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSA-EVTDLFLQEI 925
LP+S + N I +V+DRLTKY HF+ LKHP+ A E+ + FLQ I
Sbjct: 1051 LPTSKNYNCIWVVVDRLTKYAHFIPLKHPFGAKELANEFLQNI 1093
Score = 26.2 bits (56), Expect(3) = 6e-56
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLP 241
IH VFH+SQLK I L QLP
Sbjct: 1304 IHPVFHISQLKLSIKDESRVLPQLP 1328
>gb|ABD78329.1| polyprotein [Primula vulgaris]
Length = 383
Score = 191 bits (485), Expect(3) = 6e-56
Identities = 99/208 (47%), Positives = 138/208 (66%), Gaps = 4/208 (1%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY-GV 753
KLHGLPK I++DRD IF S FW++LF LGTKL +S+A+HP +DGQTE +N+ LE+Y
Sbjct: 119 KLHGLPKKIISDRDTIFTSDFWKELFHLLGTKLLLSTAFHPQTDGQTEIVNKSLETYLRC 178
Query: 752 F*S---KALLKWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
+ S K KW+ LAE+W NS HT++K PF+ALYG+ PP++S L ++
Sbjct: 179 YTSQYPKNWAKWIYLAEFWYNSTTHTSIKMPPFKALYGYEPPKLSHYLLSKEHKADIQEL 238
Query: 581 LTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNLK 402
L ++ L+ N +AQ+ M AD NR D +VGD VY+KLQPYRQ + +N K
Sbjct: 239 LQTKEEIMQALKTNYLEAQNRMKQNADLNRVDKCYKVGDYVYLKLQPYRQQSVIRRRNQK 298
Query: 401 MSAKYYGPYKILEKIGMVAYRLDFPATS 318
++ +++GPYKI EK+G VAY+L+ P TS
Sbjct: 299 LAPRFFGPYKITEKVGAVAYKLELPPTS 326
Score = 49.3 bits (116), Expect(3) = 6e-56
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSA-EVTDLFLQEI 925
LP+S + N I +V+DRLTKY HF+ LKHP+ A E+ + FLQ I
Sbjct: 75 LPTSKNYNCIWVVVDRLTKYAHFIPLKHPFGAKELANEFLQNI 117
Score = 26.2 bits (56), Expect(3) = 6e-56
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLP 241
IH VFH+SQLK I L QLP
Sbjct: 328 IHPVFHISQLKLSIKDESRVLPQLP 352
>gb|AAK55448.1|AC069300_3 putative polyprotein [Oryza sativa Japonica Group]
gi|31433481|gb|AAP54986.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1409
Score = 193 bits (490), Expect(2) = 7e-56
Identities = 94/198 (47%), Positives = 137/198 (69%), Gaps = 6/198 (3%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESYGVF 750
KLHG+P I+TDRD IF S+ +Q++FK++ +L S+AYHP +DGQTE++N+CLESY
Sbjct: 1214 KLHGMPMAIITDRDRIFTSQLFQEVFKAMKVQLRFSTAYHPQTDGQTERVNQCLESY--L 1271
Query: 749 *SKALLK------WLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAG 588
S A + WL LAEWW N+ +HT+L+ TPF+A+YG+ PPQI+ S+P + + A
Sbjct: 1272 RSMAFQEPHQWYSWLALAEWWYNTTYHTSLQMTPFQAMYGYPPPQINEFSVPCNVSAEAR 1331
Query: 587 VCLTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKN 408
V +L +L+ +L +AQ M +AD NRS+ L VGD+VY+KLQPYRQ +
Sbjct: 1332 VTTEQKEAILRKLKSSLTEAQRRMKHYADRNRSERSLAVGDMVYIKLQPYRQTAFGIRGS 1391
Query: 407 LKMSAKYYGPYKILEKIG 354
LK+ +K+YGP+K+LE++G
Sbjct: 1392 LKLRSKFYGPFKVLERVG 1409
Score = 52.4 bits (124), Expect(2) = 7e-56
Identities = 25/43 (58%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSAE-VTDLFLQEI 925
LP S K+ IL+V+DRLTKY HFL+L HPYS E V ++F+ I
Sbjct: 1170 LPKSKGKDVILVVVDRLTKYAHFLALTHPYSVEQVVEVFMDNI 1212
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 202 bits (514), Expect(2) = 7e-56
Identities = 98/205 (47%), Positives = 140/205 (68%), Gaps = 4/205 (1%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY--- 759
KLHG P IV+DRD IF S+ WQ+LFKS+ +L S+AYHP +DGQTE++N+C+ESY
Sbjct: 1043 KLHGFPIAIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVNQCVESYLRC 1102
Query: 758 -GVF*SKALLKWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
+ K + WLPLAEWW N+ HT LK +PF+ALYGF PP I+ ++P + A
Sbjct: 1103 MAMQEPKKWVSWLPLAEWWYNTTFHTALKLSPFQALYGFPPPLINEVAIPGPEDNEARDF 1162
Query: 581 LTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNLK 402
L + +L +L++NL QAQ M +AD NRS+ L VGD+VY+K+QPYR + LK
Sbjct: 1163 LEEKQVMLRRLKENLAQAQTRMKKYADLNRSERQLTVGDMVYLKMQPYRTTAFGLKQALK 1222
Query: 401 MSAKYYGPYKILEKIGMVAYRLDFP 327
+++ +YGP+++++++G VAYRL P
Sbjct: 1223 LTSIFYGPFRVMQRVGKVAYRLQLP 1247
Score = 43.1 bits (100), Expect(2) = 7e-56
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSAE-VTDLFLQEI 925
LPSS K I +V+DR TKY H + L HPYS + V F+ I
Sbjct: 999 LPSSKGKEVIFVVVDRFTKYAHSVPLSHPYSVQLVAQAFIDNI 1041
>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 183 bits (465), Expect(4) = 8e-56
Identities = 101/217 (46%), Positives = 136/217 (62%), Gaps = 4/217 (1%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY-GV 753
KLHGLP+ I++DRD IF S+FW QLF GT L MSSAYHP SDGQTE++N+CLE Y
Sbjct: 1247 KLHGLPRAIISDRDKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRC 1306
Query: 752 F*SKALLK---WLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
F A K WL LAE+W N++ H+TL TPFE LYG+TP +G L +
Sbjct: 1307 FVHAAPHKWSSWLYLAEFWYNTSFHSTLNKTPFEVLYGYTPSHFGIG-LDDCQIADLHEW 1365
Query: 581 LTH*RNLLHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNLK 402
T + + L+++L +AQ M AD RS VGD VY+KLQPY Q F+A K
Sbjct: 1366 HTERKFMQQLLQQHLNRAQQQMKHQADKKRSFRQFAVGDWVYLKLQPYVQTFVAQRACHK 1425
Query: 401 MSAKYYGPYKILEKIGMVAYRLDFPATS*STLSSMFH 291
++ +YYGP++++ ++G VAY + PAT S++ +FH
Sbjct: 1426 LAFRYYGPFQVMSRVGTVAYHIQLPAT--SSIHPVFH 1460
Score = 44.3 bits (103), Expect(4) = 8e-56
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSA 955
LP S H N IL+V+D+ +KY HF+ L HP++A
Sbjct: 1203 LPRSSHYNCILVVVDKFSKYSHFIPLSHPFNA 1234
Score = 32.0 bits (71), Expect(4) = 8e-56
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 214 LMQPLAILHQRLVNVNNAVTVKVLMHWSNLSAKEATLED 98
L P L +RLV N +++L HW + S E+T ED
Sbjct: 1485 LQVPFQFLDKRLVKKGNRSVLQLLTHWYHSSPSESTWED 1523
Score = 26.9 bits (58), Expect(4) = 8e-56
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGIIPLAQLPT 238
IH VFHVSQLK +G +LPT
Sbjct: 1455 IHPVFHVSQLKAAVGFSKKVQDELPT 1480
>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 187 bits (475), Expect(3) = 5e-55
Identities = 102/209 (48%), Positives = 137/209 (65%), Gaps = 5/209 (2%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY--G 756
+LHG P +IV+DRD +F+S FW ++FK GTKL SSAYHP +DGQTE +NRC+E+Y
Sbjct: 1228 RLHGFPTSIVSDRDRVFLSTFWSEMFKLAGTKLKFSSAYHPQTDGQTEVVNRCVETYLRC 1287
Query: 755 VF*SKALL--KWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
V SK KWL AE+W N+N+H+ +K+TPF+ALYG PP I G+ T
Sbjct: 1288 VTGSKPKQWPKWLSWAEFWYNTNYHSAIKTTPFKALYGREPPVIFKGN-DSLTSVDEVEK 1346
Query: 581 LTH*RNL-LHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNL 405
LT RNL L +L+ NL++AQ+ M A+ +R D +VGDLVY+K+QPY+ +A N
Sbjct: 1347 LTAERNLILEELKSNLEKAQNRMRQQANKHRRDVQYEVGDLVYLKIQPYKLKSLAKRSNQ 1406
Query: 404 KMSAKYYGPYKILEKIGMVAYRLDFPATS 318
K+S +YYGPY I+ KI AY+L P S
Sbjct: 1407 KLSPRYYGPYPIIAKINPAAYKLQLPEGS 1435
Score = 50.4 bits (119), Expect(3) = 5e-55
Identities = 21/43 (48%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSA-EVTDLFLQEI 925
LP + K+ IL+V+DR TKY HF++L HPY+A E+ ++F++E+
Sbjct: 1184 LPKAMGKDTILVVVDRFTKYAHFIALSHPYNAKEIAEVFIKEV 1226
Score = 25.8 bits (55), Expect(3) = 5e-55
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGI 262
+H VFH+S LKK + G+
Sbjct: 1437 VHPVFHISLLKKAVNAGV 1454
>dbj|BAG72151.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 187 bits (475), Expect(3) = 5e-55
Identities = 102/209 (48%), Positives = 137/209 (65%), Gaps = 5/209 (2%)
Frame = -1
Query: 929 KLHGLPKTIVTDRDDIFISRFWQQLFKSLGTKLTMSSAYHPHSDGQTEQLNRCLESY--G 756
+LHG P +IV+DRD +F+S FW ++FK GTKL SSAYHP +DGQTE +NRC+E+Y
Sbjct: 1228 RLHGFPTSIVSDRDRVFLSTFWSEMFKLAGTKLKFSSAYHPQTDGQTEVVNRCVETYLRC 1287
Query: 755 VF*SKALL--KWLPLAEWWCNSNHHTTLKSTPFEALYGFTPPQISMGSLPHSTQSPAGVC 582
V SK KWL AE+W N+N+H+ +K+TPF+ALYG PP I G+ T
Sbjct: 1288 VTGSKPKQWPKWLSWAEFWYNTNYHSAIKTTPFKALYGREPPVIFKGN-DSLTSVDEVEK 1346
Query: 581 LTH*RNL-LHQLRKNLQQAQDCMNVFADNNRSD*VLQVGDLVYVKLQPYRQAFMANCKNL 405
LT RNL L +L+ NL++AQ+ M A+ +R D +VGDLVY+K+QPY+ +A N
Sbjct: 1347 LTAERNLILEELKSNLEKAQNRMRQQANKHRRDVQYEVGDLVYLKIQPYKLKSLAKRSNQ 1406
Query: 404 KMSAKYYGPYKILEKIGMVAYRLDFPATS 318
K+S +YYGPY I+ KI AY+L P S
Sbjct: 1407 KLSPRYYGPYPIIAKINPAAYKLQLPEGS 1435
Score = 50.4 bits (119), Expect(3) = 5e-55
Identities = 21/43 (48%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Frame = -3
Query: 1050 LPSSGHKNYILLVIDRLTKYGHFLSLKHPYSA-EVTDLFLQEI 925
LP + K+ IL+V+DR TKY HF++L HPY+A E+ ++F++E+
Sbjct: 1184 LPKTMGKDTILVVVDRFTKYAHFIALSHPYNAKEIAEVFIKEV 1226
Score = 25.8 bits (55), Expect(3) = 5e-55
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 315 IHLVFHVSQLKKRIGPGI 262
+H VFH+S LKK + G+
Sbjct: 1437 VHPVFHISLLKKAVNAGV 1454