BLASTX nr result
ID: Atropa21_contig00024347
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00024347
(636 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004252671.1| PREDICTED: uncharacterized protein LOC101246... 50 2e-09
ref|XP_002333406.1| predicted protein [Populus trichocarpa] 38 2e-07
ref|XP_002332211.1| predicted protein [Populus trichocarpa] 38 7e-07
ref|XP_004228829.1| PREDICTED: uncharacterized protein LOC101254... 53 2e-06
ref|XP_002331746.1| predicted protein [Populus trichocarpa] 39 4e-06
>ref|XP_004252671.1| PREDICTED: uncharacterized protein LOC101246698 [Solanum
lycopersicum]
Length = 330
Score = 50.4 bits (119), Expect(3) = 2e-09
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Frame = +2
Query: 182 VKVVT--TQPIHSEVQHKGT*DKMGITIVYGYNYQGFRRGLSKDIITIHSK*SGPQAIAR 355
VK++T TQ IH +Q + + +T+VYG+N R+ L D+I I + P I
Sbjct: 70 VKLITSATQMIHCYIQERSKGFQFHLTVVYGFNTIEQRKSLWSDMIQIGQNVNHPWIIVG 129
Query: 356 DFNCVINMEVRV-GSQVTTAEIRDMRQCMGSY*VQDLKSLISYYT 487
DFN +++ + R+ G V EI+D C+ + +++ +YYT
Sbjct: 130 DFNAMLSPKDRLAGVPVNENEIKDFSNCVKVMGLNEVQWKGNYYT 174
Score = 29.3 bits (64), Expect(3) = 2e-09
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 10 MHNANVSLFALLETKVKITK*QISTLNLCCGLSFTTKMNARLGGRMWLL 156
+ N V+L L+ET+VK + + N+ G + + GR+W++
Sbjct: 14 LQNNKVTLAGLIETRVKENNTRTTINNIAAGWNCLNNYKDAVNGRIWII 62
Score = 28.1 bits (61), Expect(3) = 2e-09
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 483 THSFKQKGTNKVMRNIDRVLVNCEWQADLPTFEVHYLNEGLFDN 614
T + KQ G ++ R IDR N +W + Y N G+ D+
Sbjct: 174 TWNNKQSGNKRISRRIDRAFGNEDWMDKWGHVILEYGNPGVSDH 217
>ref|XP_002333406.1| predicted protein [Populus trichocarpa]
Length = 1166
Score = 37.7 bits (86), Expect(3) = 2e-07
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +2
Query: 191 VTTQPIHSEVQHKGT*DKMGITIVYGYNYQGFRRGLSKDIIT-IHSK*SGPQAIARDFNC 367
++ Q IH V T +I+YG N R L DI++ S P + DFN
Sbjct: 609 MSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTPWILMGDFNA 668
Query: 368 VINMEVRVGSQVTTAEIRD-MRQCMGSY*VQDLKSLISYYT 487
+ N R+G T A D + C+ V DL+ +YT
Sbjct: 669 IRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYT 709
Score = 35.4 bits (80), Expect(3) = 2e-07
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 510 NKVMRNIDRVLVNCEWQADLPTFEVHYLNEGLFDNYHAIIQL 635
N +M+ +DRVLVN +W P E +L G+ D+ ++++
Sbjct: 717 NLIMQKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKV 758
Score = 26.9 bits (58), Expect(3) = 2e-07
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 10 MHNANVSLFALLETKVKITK*QISTLNLCCGLSFTTKMNARLGGRMWL 153
+H ++LF L+ET+VK T L SF + GR+W+
Sbjct: 548 IHQKRIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGRIWV 595
>ref|XP_002332211.1| predicted protein [Populus trichocarpa]
Length = 1386
Score = 37.7 bits (86), Expect(3) = 7e-07
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 510 NKVMRNIDRVLVNCEWQADLPTFEVHYLNEGLFDNYHAIIQL 635
N +MR +DRVLVN +W + P E +L G+ D+ ++++
Sbjct: 717 NLIMRKLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKV 758
Score = 33.9 bits (76), Expect(3) = 7e-07
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 191 VTTQPIHSEVQHKGT*DKMGITIVYGYNYQGFRRGLSKDIIT-IHSK*SGPQAIARDFNC 367
++ Q IH V T +I+YG N R L DI++ S P + DFN
Sbjct: 609 MSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTPWILMGDFNA 668
Query: 368 VINMEVRVGSQVTTAEIRD 424
+ N R+G T A D
Sbjct: 669 IRNQSDRLGGSTTWAGTMD 687
Score = 26.9 bits (58), Expect(3) = 7e-07
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 10 MHNANVSLFALLETKVKITK*QISTLNLCCGLSFTTKMNARLGGRMWL 153
+H ++LF L+ET+VK T L SF + GR+W+
Sbjct: 548 IHQERIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGRIWV 595
>ref|XP_004228829.1| PREDICTED: uncharacterized protein LOC101254124 [Solanum
lycopersicum]
Length = 620
Score = 52.8 bits (125), Expect(2) = 2e-06
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +2
Query: 194 TTQPIHSEVQHKGT*DKMGITIVYGYNYQGFRRGLSKDIITIHSK*SGPQAIARDFNCVI 373
+ Q IHS + + + +T+VYG+N R+ L D+ + P I DFN ++
Sbjct: 370 SAQMIHSHINERSKGYQFNLTVVYGFNTLEQRKSLWNDLKMLVQNVLDPWLIVEDFNAIL 429
Query: 374 NMEVRV-GSQVTTAEIRDMRQCMGSY*VQDLKSLISYYT 487
+ + R+ G+ VT EIRD +C+ + +++ +YYT
Sbjct: 430 SPKNRLAGAPVTLNEIRDFEECVKDMGITEVQWKGNYYT 468
Score = 25.4 bits (54), Expect(2) = 2e-06
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = +3
Query: 507 TNKVMRN------IDRVLVNCEWQADLPTFEVHYLNEGLFDN 614
TNK +RN IDR N W + Y N G+FD+
Sbjct: 470 TNKQIRNVRIASRIDRAFGNDTWMYKWGHAAIEYGNSGVFDH 511
>ref|XP_002331746.1| predicted protein [Populus trichocarpa]
Length = 503
Score = 39.3 bits (90), Expect(2) = 4e-06
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +3
Query: 510 NKVMRNIDRVLVNCEWQADLPTFEVHYLNEGLFDNYHAIIQL 635
N +MR +DRVLVN +W + P EV +L G+ D+ ++++
Sbjct: 177 NLIMRKLDRVLVNEKWNLNFPLSEVRFLPSGISDHSPMVVKV 218
Score = 37.7 bits (86), Expect(2) = 4e-06
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +2
Query: 191 VTTQPIHSEVQHKGT*DKMGITIVYGYNYQGFRRGLSKDIIT-IHSK*SGPQAIARDFNC 367
++ Q IH V T +I+YG N R L DI++ S P + DFN
Sbjct: 69 MSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTPWILMGDFNA 128
Query: 368 VINMEVRVGSQVTTAEIRD-MRQCMGSY*VQDLKSLISYYT 487
+ N R+G T A D + C+ V DL+ +YT
Sbjct: 129 IRNQSHRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYT 169