BLASTX nr result
ID: Atropa21_contig00024303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00024303
(746 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344628.1| PREDICTED: DNA polymerase zeta catalytic sub... 381 e-103
ref|XP_006344627.1| PREDICTED: DNA polymerase zeta catalytic sub... 381 e-103
ref|XP_004231275.1| PREDICTED: uncharacterized protein LOC101266... 354 2e-95
gb|EOY11311.1| Recovery protein 3 isoform 3 [Theobroma cacao] gi... 91 5e-16
gb|EOY11310.1| Recovery protein 3 isoform 2, partial [Theobroma ... 91 5e-16
gb|EOY11309.1| Recovery protein 3 isoform 1 [Theobroma cacao] 91 5e-16
gb|EXC02386.1| Retrovirus-related Pol polyprotein from transposo... 81 4e-13
gb|EXC54611.1| Retrovirus-related Pol polyprotein from transposo... 79 1e-12
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat... 75 2e-11
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263... 75 3e-11
emb|CBI36804.3| unnamed protein product [Vitis vinifera] 75 3e-11
gb|EMJ07643.1| hypothetical protein PRUPE_ppa000111mg [Prunus pe... 73 1e-10
ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, par... 66 1e-08
ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 66 1e-08
ref|XP_002319017.2| hypothetical protein POPTR_0013s02320g [Popu... 63 1e-07
ref|XP_002319016.2| hypothetical protein POPTR_0013s02320g [Popu... 63 1e-07
tpg|DAA64055.1| TPA: hypothetical protein ZEAMMB73_677675 [Zea m... 60 1e-06
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from... 57 6e-06
gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic ... 57 6e-06
ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thalia... 57 6e-06
>ref|XP_006344628.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X2
[Solanum tuberosum]
Length = 1747
Score = 381 bits (978), Expect = e-103
Identities = 186/248 (75%), Positives = 199/248 (80%)
Frame = +1
Query: 1 GTKDLFHLADVENRKSAVYMGCCGCCSRKNVDSCVKCTKTSNPDLCTPIFAPYSRSTSET 180
GTKDLF L DVEN+KSAVYMG CGCCS +NVDSCV CTK SNPDLCT I APYS+ TSET
Sbjct: 542 GTKDLFQLPDVENKKSAVYMGSCGCCSCENVDSCVICTKISNPDLCTSIVAPYSQFTSET 601
Query: 181 DDKSTGCGKLLQKNAVGLXXXXXXXXXXXXXXXXXXXDFVELIGMTFIKKPPKVEFTDEP 360
++K GCGKLLQKNAVGL D +EL GMTFIKKPPKVEFTDEP
Sbjct: 602 EEKFPGCGKLLQKNAVGLSQSPAGPSGSISTVIGVSADVLELKGMTFIKKPPKVEFTDEP 661
Query: 361 GRNAQSACGAPSYHVVNKKNRARSRAHDRGLDECPPFLEGNCLVGENIYSTNCGTSKDVH 540
RNAQSACG PSYHV NKKN+ R+ A DRGLDECPPF EGNCLVGE I S NCGTS V
Sbjct: 662 RRNAQSACGTPSYHV-NKKNKIRTCAQDRGLDECPPFFEGNCLVGEKISSANCGTSNYVP 720
Query: 541 CQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQWLSLDCIDSSKANVVSGPPVYPST 720
CQDN+LGVPVHYQNDGSYLYMLTPVYSPP+SE VR+WLSLDC DSSK +VVSGPPVYPST
Sbjct: 721 CQDNLLGVPVHYQNDGSYLYMLTPVYSPPQSESVRRWLSLDCADSSKMDVVSGPPVYPST 780
Query: 721 KVCSDDVA 744
KVCSD +A
Sbjct: 781 KVCSDHIA 788
>ref|XP_006344627.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X1
[Solanum tuberosum]
Length = 1976
Score = 381 bits (978), Expect = e-103
Identities = 186/248 (75%), Positives = 199/248 (80%)
Frame = +1
Query: 1 GTKDLFHLADVENRKSAVYMGCCGCCSRKNVDSCVKCTKTSNPDLCTPIFAPYSRSTSET 180
GTKDLF L DVEN+KSAVYMG CGCCS +NVDSCV CTK SNPDLCT I APYS+ TSET
Sbjct: 771 GTKDLFQLPDVENKKSAVYMGSCGCCSCENVDSCVICTKISNPDLCTSIVAPYSQFTSET 830
Query: 181 DDKSTGCGKLLQKNAVGLXXXXXXXXXXXXXXXXXXXDFVELIGMTFIKKPPKVEFTDEP 360
++K GCGKLLQKNAVGL D +EL GMTFIKKPPKVEFTDEP
Sbjct: 831 EEKFPGCGKLLQKNAVGLSQSPAGPSGSISTVIGVSADVLELKGMTFIKKPPKVEFTDEP 890
Query: 361 GRNAQSACGAPSYHVVNKKNRARSRAHDRGLDECPPFLEGNCLVGENIYSTNCGTSKDVH 540
RNAQSACG PSYHV NKKN+ R+ A DRGLDECPPF EGNCLVGE I S NCGTS V
Sbjct: 891 RRNAQSACGTPSYHV-NKKNKIRTCAQDRGLDECPPFFEGNCLVGEKISSANCGTSNYVP 949
Query: 541 CQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQWLSLDCIDSSKANVVSGPPVYPST 720
CQDN+LGVPVHYQNDGSYLYMLTPVYSPP+SE VR+WLSLDC DSSK +VVSGPPVYPST
Sbjct: 950 CQDNLLGVPVHYQNDGSYLYMLTPVYSPPQSESVRRWLSLDCADSSKMDVVSGPPVYPST 1009
Query: 721 KVCSDDVA 744
KVCSD +A
Sbjct: 1010 KVCSDHIA 1017
>ref|XP_004231275.1| PREDICTED: uncharacterized protein LOC101266467 [Solanum
lycopersicum]
Length = 2734
Score = 354 bits (909), Expect = 2e-95
Identities = 175/248 (70%), Positives = 191/248 (77%)
Frame = +1
Query: 1 GTKDLFHLADVENRKSAVYMGCCGCCSRKNVDSCVKCTKTSNPDLCTPIFAPYSRSTSET 180
GTKDL L DVEN++SAVYMG CGCCS +N+DSCV CTK S+PDLCT I AP SR TSET
Sbjct: 734 GTKDLSQLPDVENKRSAVYMGGCGCCSCENIDSCVICTKISDPDLCTSIVAPCSRFTSET 793
Query: 181 DDKSTGCGKLLQKNAVGLXXXXXXXXXXXXXXXXXXXDFVELIGMTFIKKPPKVEFTDEP 360
++K GCGKLLQ N +GL D +EL GMTFIKKPPKVEFTDEP
Sbjct: 794 EEKFPGCGKLLQTNVIGLSQSSASPSCSISTVVGVSADDLELKGMTFIKKPPKVEFTDEP 853
Query: 361 GRNAQSACGAPSYHVVNKKNRARSRAHDRGLDECPPFLEGNCLVGENIYSTNCGTSKDVH 540
RNAQSACG PSYHV NKKN+ R+ DRGLDECPPF EGNCLV E I S NCGTS V
Sbjct: 854 RRNAQSACGTPSYHV-NKKNKIRTCDQDRGLDECPPFFEGNCLVKEKISSANCGTSNYVP 912
Query: 541 CQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQWLSLDCIDSSKANVVSGPPVYPST 720
CQDN+LGVPVHYQNDGSYLYMLTPVYSPPRSE VR+WLSLD + SSK +VVS PPVYPST
Sbjct: 913 CQDNLLGVPVHYQNDGSYLYMLTPVYSPPRSESVRRWLSLDYVVSSKMDVVSAPPVYPST 972
Query: 721 KVCSDDVA 744
KVCSD +A
Sbjct: 973 KVCSDHIA 980
>gb|EOY11311.1| Recovery protein 3 isoform 3 [Theobroma cacao]
gi|508719415|gb|EOY11312.1| Recovery protein 3 isoform 3
[Theobroma cacao]
Length = 1590
Score = 90.5 bits (223), Expect = 5e-16
Identities = 52/125 (41%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = +1
Query: 298 VELIGMTFIKKPPKVEFTDEPGRNAQ---SACGAPSYHVVNKKNRARSRAHDRGLDECPP 468
VELIGMTF KKPP ++ D N + +PS + N++N + R LDE P
Sbjct: 480 VELIGMTFCKKPPTADWNDGATENVTHLPTTQHSPS--LFNEENCQGTSG--RALDEVLP 535
Query: 469 FLEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQ 648
F C + + + G + Q+ LGVP+HYQNDGS+LY+LTPV SPP + V +
Sbjct: 536 FFSRGCEEEKEVQNKCLGNNNSNFHQEAALGVPIHYQNDGSFLYLLTPVSSPPSPDSVYR 595
Query: 649 WLSLD 663
WLS D
Sbjct: 596 WLSCD 600
>gb|EOY11310.1| Recovery protein 3 isoform 2, partial [Theobroma cacao]
Length = 1425
Score = 90.5 bits (223), Expect = 5e-16
Identities = 52/125 (41%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = +1
Query: 298 VELIGMTFIKKPPKVEFTDEPGRNAQ---SACGAPSYHVVNKKNRARSRAHDRGLDECPP 468
VELIGMTF KKPP ++ D N + +PS + N++N + R LDE P
Sbjct: 671 VELIGMTFCKKPPTADWNDGATENVTHLPTTQHSPS--LFNEENCQGTSG--RALDEVLP 726
Query: 469 FLEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQ 648
F C + + + G + Q+ LGVP+HYQNDGS+LY+LTPV SPP + V +
Sbjct: 727 FFSRGCEEEKEVQNKCLGNNNSNFHQEAALGVPIHYQNDGSFLYLLTPVSSPPSPDSVYR 786
Query: 649 WLSLD 663
WLS D
Sbjct: 787 WLSCD 791
>gb|EOY11309.1| Recovery protein 3 isoform 1 [Theobroma cacao]
Length = 2035
Score = 90.5 bits (223), Expect = 5e-16
Identities = 52/125 (41%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = +1
Query: 298 VELIGMTFIKKPPKVEFTDEPGRNAQ---SACGAPSYHVVNKKNRARSRAHDRGLDECPP 468
VELIGMTF KKPP ++ D N + +PS + N++N + R LDE P
Sbjct: 925 VELIGMTFCKKPPTADWNDGATENVTHLPTTQHSPS--LFNEENCQGTSG--RALDEVLP 980
Query: 469 FLEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQ 648
F C + + + G + Q+ LGVP+HYQNDGS+LY+LTPV SPP + V +
Sbjct: 981 FFSRGCEEEKEVQNKCLGNNNSNFHQEAALGVPIHYQNDGSFLYLLTPVSSPPSPDSVYR 1040
Query: 649 WLSLD 663
WLS D
Sbjct: 1041 WLSCD 1045
>gb|EXC02386.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1854
Score = 80.9 bits (198), Expect = 4e-13
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = +1
Query: 298 VELIGMTFIKKPPKVEFTDEPGRNAQSACGAPSYHVVNKKNRARSRAHDRGLDECPPFLE 477
++LI +TF +K P ++ EP R A S H+ + + A R LD+ PF
Sbjct: 1343 MDLICLTFYRKSPATDWITEPSRKAFSDSFIS--HLPCQDKESHDGASGRALDDFLPFFM 1400
Query: 478 GNCLVGENIYSTNCGTSKDVHCQ-DNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQWL 654
+C GE T C T + + + +GVP HYQNDGSY Y+LTP+ SPP S+ V++WL
Sbjct: 1401 EDCQ-GEAEIQTKCITVNESTSEHEAAVGVPAHYQNDGSYSYLLTPLVSPPSSKNVKRWL 1459
Query: 655 SL 660
S+
Sbjct: 1460 SI 1461
>gb|EXC54611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1609
Score = 79.3 bits (194), Expect = 1e-12
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Frame = +1
Query: 298 VELIGMTFIKKPPKVEFTDEPGRNAQSACGAPSYHVVNKKNRARSRAHDRGLDECPPFLE 477
++LI +TF +K P ++ P R A S HV + + A R LD+ PF
Sbjct: 1086 MDLICLTFYRKSPATDWITGPSRKAFSDSFIS--HVPCQDKESHDGASGRALDDFLPFFM 1143
Query: 478 GNCLVGENIYSTNCGTSKDVHCQ-DNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQWL 654
+C GE T C T + + + +GVP HYQNDGSY Y+LTP+ SPP S+ V++WL
Sbjct: 1144 EDCQ-GEAEIQTKCITVNESTSEHEAAVGVPAHYQNDGSYSYLLTPLVSPPSSKNVKRWL 1202
Query: 655 SL 660
S+
Sbjct: 1203 SI 1204
>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
gi|223548348|gb|EEF49839.1| DNA polymerase zeta
catalytic subunit, putative [Ricinus communis]
Length = 2066
Score = 75.1 bits (183), Expect = 2e-11
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +1
Query: 442 DRGLDECPPFLEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYS 621
++ L E PF EG+C + + + + Q+ ++GVP HYQNDGS LY+LTP+YS
Sbjct: 146 EKALGELLPFFEGDCQEKKVVQNKALPNTNSNDQQEAIMGVPTHYQNDGSLLYLLTPIYS 205
Query: 622 PPRSECVRQWLSLD 663
PP ++CV +WL D
Sbjct: 206 PPSADCVYRWLRCD 219
>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
Length = 2002
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = +1
Query: 451 LDECPPFLEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPR 630
LDE PF G+C + +++ C + H Q+ +GVP HYQNDGS+LY+LTPV+SPP
Sbjct: 149 LDEFIPFFVGDCQEEKKVWN-KCYNDLNNH-QEVGMGVPTHYQNDGSFLYLLTPVFSPPS 206
Query: 631 SECVRQWLSLDCIDSS 678
++CV +WL D D+S
Sbjct: 207 ADCVHRWLLHDDTDTS 222
>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
Length = 1732
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = +1
Query: 451 LDECPPFLEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPR 630
LDE PF G+C + +++ C + H Q+ +GVP HYQNDGS+LY+LTPV+SPP
Sbjct: 735 LDEFIPFFVGDCQEEKKVWN-KCYNDLNNH-QEVGMGVPTHYQNDGSFLYLLTPVFSPPS 792
Query: 631 SECVRQWLSLDCIDSS 678
++CV +WL D D+S
Sbjct: 793 ADCVHRWLLHDDTDTS 808
>gb|EMJ07643.1| hypothetical protein PRUPE_ppa000111mg [Prunus persica]
Length = 1771
Score = 72.8 bits (177), Expect = 1e-10
Identities = 43/120 (35%), Positives = 59/120 (49%)
Frame = +1
Query: 304 LIGMTFIKKPPKVEFTDEPGRNAQSACGAPSYHVVNKKNRARSRAHDRGLDECPPFLEGN 483
LI M+F +KPP ++ +NA S R DE PF +
Sbjct: 732 LIEMSFCRKPPVADWNYGESKNASSLYDG------------------RATDEFCPFFVRD 773
Query: 484 CLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQWLSLD 663
C E C S+ Q++V+GVP+HYQ DGSYLY+LTP +PP ++ V +WLS D
Sbjct: 774 CQ-DEREIQNKCVRSESSSHQESVMGVPIHYQTDGSYLYLLTPATTPPSAKNVCRWLSSD 832
>ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
Length = 1591
Score = 65.9 bits (159), Expect = 1e-08
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Frame = +1
Query: 307 IGMTFIKKPPKVEFTD-EPGRNAQSACGAPSYHVVNKKNRARSRAHDRGLDECPPFL--- 474
IG+T +KPP + EP + S S+ K + R LD+ PF
Sbjct: 938 IGLTTCRKPPNADLMHKEPFASTSSTM---SWKRALLKQKDVEGETGRALDDLLPFFLDR 994
Query: 475 EGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQWL 654
+ N + E+ YS+ ++ +GVP+HY+NDGS++Y+LTPV SPP VRQWL
Sbjct: 995 DKNDIFEEHGYSS----------KEAAMGVPIHYRNDGSFMYILTPVNSPPSKNSVRQWL 1044
Query: 655 S 657
+
Sbjct: 1045 T 1045
>ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222413
[Cucumis sativus]
Length = 2868
Score = 65.9 bits (159), Expect = 1e-08
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Frame = +1
Query: 307 IGMTFIKKPPKVEFTD-EPGRNAQSACGAPSYHVVNKKNRARSRAHDRGLDECPPFL--- 474
IG+T +KPP + EP + S S+ K + R LD+ PF
Sbjct: 938 IGLTTCRKPPNADLMHKEPFASTSSTM---SWKRALLKQKDVEGETGRALDDLLPFFLDR 994
Query: 475 EGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQWL 654
+ N + E+ YS+ ++ +GVP+HY+NDGS++Y+LTPV SPP VRQWL
Sbjct: 995 DKNDIFEEHGYSS----------KEAAMGVPIHYRNDGSFMYILTPVNSPPSKNSVRQWL 1044
Query: 655 S 657
+
Sbjct: 1045 T 1045
>ref|XP_002319017.2| hypothetical protein POPTR_0013s02320g [Populus trichocarpa]
gi|550324755|gb|EEE94940.2| hypothetical protein
POPTR_0013s02320g [Populus trichocarpa]
Length = 1831
Score = 62.8 bits (151), Expect = 1e-07
Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +1
Query: 298 VELIGMTFIKKPPKVEFTDEPGRNAQSACGAPSY--HVVNKKNRARSRAHDRGLDECPPF 471
++L+GMTF KKPP E+ D N S APS+ N +N+ R+ A
Sbjct: 860 IDLLGMTFCKKPPTAEWKDGASENV-SFSPAPSFLPSSANVENKDRTSA----------- 907
Query: 472 LEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQW 651
++GVP HY NDGS LY+LT V+SPP + V +W
Sbjct: 908 ---------------------------IIGVPTHYLNDGSVLYLLTHVFSPPSVDSVHRW 940
Query: 652 LSLD 663
L D
Sbjct: 941 LLCD 944
>ref|XP_002319016.2| hypothetical protein POPTR_0013s02320g [Populus trichocarpa]
gi|550324754|gb|EEE94939.2| hypothetical protein
POPTR_0013s02320g [Populus trichocarpa]
Length = 1855
Score = 62.8 bits (151), Expect = 1e-07
Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +1
Query: 298 VELIGMTFIKKPPKVEFTDEPGRNAQSACGAPSY--HVVNKKNRARSRAHDRGLDECPPF 471
++L+GMTF KKPP E+ D N S APS+ N +N+ R+ A
Sbjct: 860 IDLLGMTFCKKPPTAEWKDGASENV-SFSPAPSFLPSSANVENKDRTSA----------- 907
Query: 472 LEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQW 651
++GVP HY NDGS LY+LT V+SPP + V +W
Sbjct: 908 ---------------------------IIGVPTHYLNDGSVLYLLTHVFSPPSVDSVHRW 940
Query: 652 LSLD 663
L D
Sbjct: 941 LLCD 944
>tpg|DAA64055.1| TPA: hypothetical protein ZEAMMB73_677675 [Zea mays]
Length = 1602
Score = 59.7 bits (143), Expect = 1e-06
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Frame = +1
Query: 304 LIGMTFIKKPPKVEFT----DEPGRNAQSACGAPSYHVVNKKNRARSRAHDRGLDECPPF 471
L M F++KPP + + P Q C +P R A GL + PF
Sbjct: 580 LTRMAFVQKPPLKDDACSGLESPSDCEQRGCRSP-----------RPLAEKSGLADLLPF 628
Query: 472 LEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQW 651
N + EN + + +D+ +VLGVP H+QNDGS LY+LT SPP + V W
Sbjct: 629 FNQN--MEENKQNESF---QDMESTGDVLGVPTHFQNDGSALYLLTHALSPPSAGAVGHW 683
Query: 652 LSLDCIDSSKANVVSG 699
L+ S +++ SG
Sbjct: 684 LT----QQSSSSIFSG 695
>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
[Arabidopsis thaliana]
Length = 1894
Score = 57.0 bits (136), Expect = 6e-06
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Frame = +1
Query: 304 LIGMTFIKKPPKVEFTDEPGRNAQSACGAPSYHVVNKKNRARSRAHDR--GLDECPPF-- 471
LI +T KKPP ++ Q + + H AR + HD G PF
Sbjct: 823 LICLTLSKKPPSLDCLSA---GLQDSAHSHEIH-------AREKQHDEYEGNSNDIPFFP 872
Query: 472 LEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQW 651
LE N ++ + GTS LG+P+H+ NDGS LY+LTP +SPP + V QW
Sbjct: 873 LEDNKEEKKHFFQ---GTS---------LGIPLHHLNDGSNLYLLTPAFSPPSVDSVLQW 920
Query: 652 LSLDCIDSS 678
+S D DS+
Sbjct: 921 ISNDKGDSN 929
>gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
Length = 1871
Score = 57.0 bits (136), Expect = 6e-06
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Frame = +1
Query: 304 LIGMTFIKKPPKVEFTDEPGRNAQSACGAPSYHVVNKKNRARSRAHDR--GLDECPPF-- 471
LI +T KKPP ++ Q + + H AR + HD G PF
Sbjct: 823 LICLTLSKKPPSLDCLSA---GLQDSAHSHEIH-------AREKQHDEYEGNSNDIPFFP 872
Query: 472 LEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQW 651
LE N ++ + GTS LG+P+H+ NDGS LY+LTP +SPP + V QW
Sbjct: 873 LEDNKEEKKHFFQ---GTS---------LGIPLHHLNDGSNLYLLTPAFSPPSVDSVLQW 920
Query: 652 LSLDCIDSS 678
+S D DS+
Sbjct: 921 ISNDKGDSN 929
>ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|75138548|sp|Q766Z3.1|REV3_ARATH RecName: Full=DNA
polymerase zeta catalytic subunit; AltName: Full=Protein
reversionless 3-like; Short=AtREV3
gi|34330129|dbj|BAC82450.1| catalytic subunit of
polymerase zeta [Arabidopsis thaliana]
gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit
[Arabidopsis thaliana]
Length = 1890
Score = 57.0 bits (136), Expect = 6e-06
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Frame = +1
Query: 304 LIGMTFIKKPPKVEFTDEPGRNAQSACGAPSYHVVNKKNRARSRAHDR--GLDECPPF-- 471
LI +T KKPP ++ Q + + H AR + HD G PF
Sbjct: 819 LICLTLSKKPPSLDCLSA---GLQDSAHSHEIH-------AREKQHDEYEGNSNDIPFFP 868
Query: 472 LEGNCLVGENIYSTNCGTSKDVHCQDNVLGVPVHYQNDGSYLYMLTPVYSPPRSECVRQW 651
LE N ++ + GTS LG+P+H+ NDGS LY+LTP +SPP + V QW
Sbjct: 869 LEDNKEEKKHFFQ---GTS---------LGIPLHHLNDGSNLYLLTPAFSPPSVDSVLQW 916
Query: 652 LSLDCIDSS 678
+S D DS+
Sbjct: 917 ISNDKGDSN 925