BLASTX nr result

ID: Atropa21_contig00024223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00024223
         (767 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004248340.1| PREDICTED: uncharacterized protein LOC101264...    77   6e-12
ref|XP_006362968.1| PREDICTED: transcription factor bHLH112-like...    74   7e-11
ref|XP_004244171.1| PREDICTED: transcription factor bHLH123-like...    56   4e-09

>ref|XP_004248340.1| PREDICTED: uncharacterized protein LOC101264865 [Solanum
           lycopersicum]
          Length = 386

 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 56/126 (44%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
 Frame = -3

Query: 531 MAEEFQLGSENWWDNNMST-SRNRFNXXXXXXXXXXXXXXXXXXXXXXSNWPTET-HVDI 358
           MAEEFQLG  NWW+NN ST SRNRF+                      SNWP +T HVDI
Sbjct: 1   MAEEFQLGGGNWWENNTSTSSRNRFD--SSGSSITPTTSTSATTTDYSSNWPIQTNHVDI 58

Query: 357 NPRTFLD-------XXXXXXXXXXXXXXXXXXXSHDPNFQIMSLGLTSQSR--NHPSLLR 205
            PRTFLD                          SHD NFQIM LGLTSQ    NH SLL 
Sbjct: 59  KPRTFLDSVSVSQSSDHDDKGEGGGGGGGGVLSSHDSNFQIMGLGLTSQPHDWNHQSLLN 118

Query: 204 GEKAES 187
            E + S
Sbjct: 119 YEDSSS 124


>ref|XP_006362968.1| PREDICTED: transcription factor bHLH112-like [Solanum tuberosum]
          Length = 283

 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 55/125 (44%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
 Frame = -3

Query: 531 MAEEFQLGSENWWDNNMST-SRNRFNXXXXXXXXXXXXXXXXXXXXXXSNWPTET-HVDI 358
           MAEEFQLG  NWW+NN ST SRNRF+                      SNWP ET HVDI
Sbjct: 1   MAEEFQLGGGNWWENNTSTSSRNRFD--SSGSSITPTTSTSATTINYSSNWPIETDHVDI 58

Query: 357 NPRTFLD------XXXXXXXXXXXXXXXXXXXSHDPNFQIMSLGLTSQSR--NHPSLLRG 202
            PR FLD                         S D NFQIM LGLTSQ    NH SLL  
Sbjct: 59  KPRAFLDSVSVSQSSAHDDRGGGGGGGGGVLSSQDSNFQIMGLGLTSQPHDWNHQSLLNY 118

Query: 201 EKAES 187
           E + S
Sbjct: 119 EDSSS 123


>ref|XP_004244171.1| PREDICTED: transcription factor bHLH123-like [Solanum lycopersicum]
          Length = 479

 Score = 55.8 bits (133), Expect(2) = 4e-09
 Identities = 47/150 (31%), Positives = 60/150 (40%), Gaps = 21/150 (14%)
 Frame = -3

Query: 531 MAEEFQLGSENWWDNNMS--------TSRNRF---NXXXXXXXXXXXXXXXXXXXXXXSN 385
           MAEEFQLG  NWW+++ S        +SRN+F                           N
Sbjct: 1   MAEEFQLGRGNWWESSTSASSTTTTSSSRNKFIDSGISSCTTPSASSTTGLSSMASNFVN 60

Query: 384 WPTETHVDINPRTFLDXXXXXXXXXXXXXXXXXXXS---------HDPNFQIMSLGLTSQ 232
           WP E H DI  R+                                 DPN QIM LGL+SQ
Sbjct: 61  WPIEIHEDIKVRSENSSMVFSGTDSHKRYASGGGGGGVGQGVLSVDDPNLQIMGLGLSSQ 120

Query: 231 SRN-HPSLLRGEKAESGFSSILQQEDISSN 145
             + +    R EK+ SGF S++ QE +SSN
Sbjct: 121 GLDWNQPFFRSEKSGSGFRSLI-QEGLSSN 149



 Score = 32.0 bits (71), Expect(2) = 4e-09
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 140 SNYQVEANSHQDQH--WSTRQKILYSGNSEDSSSQMNNISGVSLDQNN 3
           +NYQ E    +  H  WST++  LY GNS+DSS    N    S   NN
Sbjct: 150 ANYQQEGTCQEQDHNNWSTQK--LYHGNSDDSSVNDYNKQLFSGHNNN 195


Top