BLASTX nr result
ID: Atropa21_contig00024164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00024164
(836 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containi... 368 1e-99
ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containi... 362 1e-97
ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi... 160 4e-37
gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Came... 146 8e-33
ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containi... 145 2e-32
ref|XP_006444948.1| hypothetical protein CICLE_v100190672mg, par... 145 2e-32
gb|EOX95861.1| Pentatricopeptide repeat superfamily protein, put... 138 2e-30
ref|NP_198189.1| pentatricopeptide repeat-containing protein [Ar... 137 6e-30
ref|NP_680234.1| pentatricopeptide repeat-containing protein [Ar... 137 6e-30
ref|NP_191711.1| pentatricopeptide repeat-containing protein [Ar... 136 8e-30
gb|AAM61467.1| unknown [Arabidopsis thaliana] 136 8e-30
ref|XP_006409459.1| hypothetical protein EUTSA_v10022571mg [Eutr... 134 4e-29
ref|XP_006292416.1| hypothetical protein CARUB_v10018630mg [Caps... 133 7e-29
ref|XP_002878387.1| pentatricopeptide repeat-containing protein ... 132 1e-28
ref|XP_006397795.1| hypothetical protein EUTSA_v10001319mg [Eutr... 131 3e-28
ref|XP_002511922.1| pentatricopeptide repeat-containing protein,... 124 4e-26
gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis] 123 7e-26
ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containi... 119 2e-24
ref|XP_002320827.2| pentatricopeptide repeat-containing family p... 113 1e-22
ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containi... 107 4e-21
>ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Solanum tuberosum]
Length = 761
Score = 368 bits (945), Expect = 1e-99
Identities = 190/244 (77%), Positives = 203/244 (83%)
Frame = -1
Query: 737 MKLAATTKSLLHLPTRPKSGIIAGVRHFSGEXXXXXXXXXXXXXXTSSAVPEIVSLLKTT 558
MKLAA KSLLHLP PK+G I+G+RHFSGE S AVPEIVSLLKT
Sbjct: 1 MKLAAARKSLLHLPALPKTGSISGLRHFSGEIDDTQKPLPPPPT--SFAVPEIVSLLKTN 58
Query: 557 DHNDWISNSQLLEFLNTPPSPTSLLKLTRQLGSTEKALQFFEFFKTHXXXXXXXXXXXSF 378
DHNDWISNSQL+EFL+TPPSPTSLLK+TRQLGSTEKAL FFEFFKTH SF
Sbjct: 59 DHNDWISNSQLVEFLHTPPSPTSLLKITRQLGSTEKALHFFEFFKTHSSSSSSNPSSLSF 118
Query: 377 TFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIRCFGRAKMLEESISVY 198
TFQAILEQA E+KSDVP KLFQLFSFAKDR+IPLSINAATLL+RCFGRAKMLEESISVY
Sbjct: 119 TFQAILEQAMHEEKSDVPGKLFQLFSFAKDRKIPLSINAATLLMRCFGRAKMLEESISVY 178
Query: 197 NELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPPNDSTIDIVLSAMWKR 18
NELDS+SRNTNVVNLLLDCLFRG N DDGFKVLDEMLKR+S FPPN+ST+DIVL AMWKR
Sbjct: 179 NELDSDSRNTNVVNLLLDCLFRGVNIDDGFKVLDEMLKRESDFPPNNSTVDIVLDAMWKR 238
Query: 17 NWVG 6
NWVG
Sbjct: 239 NWVG 242
>ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Solanum lycopersicum]
Length = 761
Score = 362 bits (928), Expect = 1e-97
Identities = 188/244 (77%), Positives = 203/244 (83%)
Frame = -1
Query: 737 MKLAATTKSLLHLPTRPKSGIIAGVRHFSGEXXXXXXXXXXXXXXTSSAVPEIVSLLKTT 558
MKLAA K LLHLP PK+G I+G+R FSGE S AVPEIVSLLKTT
Sbjct: 1 MKLAAARKFLLHLPALPKTGSISGLRCFSGEIDDTQKPLPQPPI--SFAVPEIVSLLKTT 58
Query: 557 DHNDWISNSQLLEFLNTPPSPTSLLKLTRQLGSTEKALQFFEFFKTHXXXXXXXXXXXSF 378
DHNDWISNS+L+E+L+TPPSPTSLLK+TRQLGSTEKALQFFEFFKTH SF
Sbjct: 59 DHNDWISNSELVEYLHTPPSPTSLLKITRQLGSTEKALQFFEFFKTHSSSSSSNPSSLSF 118
Query: 377 TFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIRCFGRAKMLEESISVY 198
TFQAILEQA RE+KSDVP KLFQLFSFAKDR+IPLSINA TLL+RCFGRAKMLEESISVY
Sbjct: 119 TFQAILEQAMREEKSDVPRKLFQLFSFAKDRKIPLSINAGTLLMRCFGRAKMLEESISVY 178
Query: 197 NELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPPNDSTIDIVLSAMWKR 18
+ELDS+SRNTNVVNLLLDCLFRG N DDGFKVLDEMLKRDS FPPN+ST+DIVLSAMWK
Sbjct: 179 HELDSDSRNTNVVNLLLDCLFRGRNIDDGFKVLDEMLKRDSDFPPNNSTVDIVLSAMWKS 238
Query: 17 NWVG 6
NWVG
Sbjct: 239 NWVG 242
>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product
[Vitis vinifera]
Length = 765
Score = 160 bits (406), Expect = 4e-37
Identities = 95/201 (47%), Positives = 127/201 (63%), Gaps = 3/201 (1%)
Frame = -1
Query: 599 SSAVPEIVSLLKTTDHNDWISNSQ---LLEFLNTPPSPTSLLKLTRQLGSTEKALQFFEF 429
SS V +V LL+TTD NDW + L + PP P +LL++TR LGST KAL+FF +
Sbjct: 51 SSVVNLVVELLQTTD-NDWNEDKLHQLLFPTTSPPPPPHNLLQITRLLGSTAKALKFFNW 109
Query: 428 FKTHXXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLL 249
+ + FT +A+ E A+RE S +KL LF +K +IPLS+NAATLL
Sbjct: 110 VQANSPCQDSPLLS--FTLEAVFEHASREPNSH--NKLLDLFKTSKSHKIPLSVNAATLL 165
Query: 248 IRCFGRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGF 69
IRCFGRA+M++ES VYNEL + R T++ N+L+D LFR DD +LDEML+ + F
Sbjct: 166 IRCFGRAQMVDESFLVYNELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEF 225
Query: 68 PPNDSTIDIVLSAMWKRNWVG 6
PPN +T IV SA+ KR+ VG
Sbjct: 226 PPNSNTGHIVFSALSKRDKVG 246
>gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Camellia sinensis]
Length = 771
Score = 146 bits (369), Expect = 8e-33
Identities = 93/249 (37%), Positives = 139/249 (55%), Gaps = 7/249 (2%)
Frame = -1
Query: 731 LAATTKSLLHLPTRPKSGIIAG---VRHFSGEXXXXXXXXXXXXXXTSSAVPEIVSLLKT 561
L+A+ +S L +P S +RH S S +I++LL+T
Sbjct: 6 LSASKQSNLLRLVKPNSSTTLPSLLLRHLSSSATDPPPPEPPPPLPNSILTTQILNLLQT 65
Query: 560 TDHNDWISNS----QLLEFLNTPPSPTSLLKLTRQLGSTEKALQFFEFFKTHXXXXXXXX 393
+ DW +N+ QLL P SL K+TR LG+ KAL FFEFF+T
Sbjct: 66 HEI-DWNNNNDELRQLLFSSTDSPHSFSLYKITRSLGTATKALNFFEFFRTQSPSPPDPS 124
Query: 392 XXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIRCFGRAKMLEE 213
S +FQAI E A+++ P+KL +L + +KD IPL+ ++ATLLIRCF RA ++E+
Sbjct: 125 SLSS-SFQAIFELASQQPNP--PTKLSELLTISKDHNIPLNFSSATLLIRCFARAGLVEK 181
Query: 212 SISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPPNDSTIDIVLS 33
S+ ++ ELD + +NT++ NL++D L R DD F+V DEMLK DS PPN+ T++I ++
Sbjct: 182 SVLIFKELDPDLKNTHISNLIVDILLRAGRVDDAFQVFDEMLKPDSESPPNEITVNIAMA 241
Query: 32 AMWKRNWVG 6
+ R+ G
Sbjct: 242 GLLWRDRTG 250
>ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g28460-like [Citrus sinensis]
Length = 757
Score = 145 bits (365), Expect = 2e-32
Identities = 85/199 (42%), Positives = 119/199 (59%), Gaps = 2/199 (1%)
Frame = -1
Query: 599 SSAVPEIVSLLKTTDHNDWISNSQL--LEFLNTPPSPTSLLKLTRQLGSTEKALQFFEFF 426
S + + + +L T N+W S+ Q+ L F +T SP ++TR+ S+ +AL FF F
Sbjct: 39 SIIITQALDVLLQTPDNEWTSSPQIKNLLFSSTSLSPQLFFQITRRFPSSSRALSFFNFL 98
Query: 425 KTHXXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLI 246
+++ + +QA+ E A RE S P LF L+ KD+ IPLSIN+ATLLI
Sbjct: 99 QSNLPTEANTSSLS-YAYQAVFELAIRERMS--PESLFDLYKACKDQNIPLSINSATLLI 155
Query: 245 RCFGRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFP 66
R FG+ M + S+ VYNELD+N RNT+V N+L+D L R + D F VLDEML R+S FP
Sbjct: 156 RFFGKVSMYDYSLLVYNELDNNLRNTHVRNVLIDVLLRCDHDRDAFNVLDEMLDRESQFP 215
Query: 65 PNDSTIDIVLSAMWKRNWV 9
N+ T DIV A+ +R V
Sbjct: 216 VNELTGDIVFYALMRREHV 234
>ref|XP_006444948.1| hypothetical protein CICLE_v100190672mg, partial [Citrus
clementina] gi|557547210|gb|ESR58188.1| hypothetical
protein CICLE_v100190672mg, partial [Citrus clementina]
Length = 260
Score = 145 bits (365), Expect = 2e-32
Identities = 85/199 (42%), Positives = 119/199 (59%), Gaps = 2/199 (1%)
Frame = -1
Query: 599 SSAVPEIVSLLKTTDHNDWISNSQL--LEFLNTPPSPTSLLKLTRQLGSTEKALQFFEFF 426
S + + + +L T N+W S+ Q+ L F +T SP ++TR+ S+ +AL FF F
Sbjct: 39 SIIITQALDVLLQTPDNEWTSSPQIKNLLFSSTSLSPQLFFQITRRFPSSSRALSFFNFL 98
Query: 425 KTHXXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLI 246
+++ + +QA+ E A RE S P LF L+ KD+ IPLSIN+ATLLI
Sbjct: 99 QSNLPTEANTSSLS-YAYQAVFELAIRERMS--PESLFDLYKACKDQNIPLSINSATLLI 155
Query: 245 RCFGRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFP 66
R FG+ M + S+ VYNELD+N RNT+V N+L+D L R + D F VLDEML R+S FP
Sbjct: 156 RFFGKVSMYDYSLLVYNELDNNLRNTHVRNVLIDVLLRCDHDRDAFNVLDEMLDRESQFP 215
Query: 65 PNDSTIDIVLSAMWKRNWV 9
N+ T DIV A+ +R V
Sbjct: 216 VNELTGDIVFYALMRREHV 234
>gb|EOX95861.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 764
Score = 138 bits (348), Expect = 2e-30
Identities = 85/199 (42%), Positives = 118/199 (59%), Gaps = 2/199 (1%)
Frame = -1
Query: 596 SAVPEIVSLLKTTDHNDWISNSQL--LEFLNTPPSPTSLLKLTRQLGSTEKALQFFEFFK 423
S + + V LL T H +W S+ L L F + P SP LL++TR+L S+ +AL FF+ +
Sbjct: 50 SKIIQAVQLLLETPHEEWSSSQPLQSLLFSSPPLSPRFLLQITRRLPSSSEALNFFKHLQ 109
Query: 422 THXXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIR 243
+ + FQA+LEQA RE D ++L QL+ +K EIPL++NAA LLIR
Sbjct: 110 QNSPSQDAQFLS--YPFQAVLEQAGREP--DSATRLSQLYQDSKQWEIPLTVNAAVLLIR 165
Query: 242 CFGRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPP 63
FGR +M++ES+ ++NELD +NT+V N+L+D R D VLDEML+ S PP
Sbjct: 166 YFGRLEMVDESLLIFNELDPTLKNTHVRNVLIDVSLRDGRVDYALNVLDEMLQPLSEVPP 225
Query: 62 NDSTIDIVLSAMWKRNWVG 6
ND T DIV + KR G
Sbjct: 226 NDVTGDIVFYGLVKRERKG 244
>ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9502152|gb|AAF88005.1| similar to a large family of
Arabidopsis thaliana salt inducible protein-like
proteins; contains similarity to Pfam family PF01535
(Domain of unknown function), score=340.5, E=1.9e-98,
N=2 [Arabidopsis thaliana] gi|332006410|gb|AED93793.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 727
Score = 137 bits (344), Expect = 6e-30
Identities = 79/192 (41%), Positives = 110/192 (57%), Gaps = 2/192 (1%)
Frame = -1
Query: 590 VPEIVSLLKTTDHNDWISNSQL--LEFLNTPPSPTSLLKLTRQLGSTEKALQFFEFFKTH 417
V + V L+ T +DW S+ L L ++ SP ++TR+LGS A+ FFE+
Sbjct: 45 VVKFVKTLQNTPQHDWASSESLSALVVSSSSASPLVFSQITRRLGSYSLAISFFEYLDAK 104
Query: 416 XXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIRCF 237
S Q+++E A E D KL +L+ AK++ IPL+I A LLIR F
Sbjct: 105 SQSLKRREESLSLALQSVIEFAGSEP--DPRDKLLRLYEIAKEKNIPLTIVATKLLIRWF 162
Query: 236 GRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPPND 57
GR M+ +S+ VY LDSN +N+ V N+++D L R DD FKVLDEML+++S FPPN
Sbjct: 163 GRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNR 222
Query: 56 STIDIVLSAMWK 21
T DIVL +WK
Sbjct: 223 ITADIVLHEVWK 234
>ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g28460 gi|9502149|gb|AAF88002.1| contains similarity
to Pfam family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120
[Arabidopsis thaliana] gi|27363272|gb|AAO11555.1|
At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 137 bits (344), Expect = 6e-30
Identities = 79/192 (41%), Positives = 110/192 (57%), Gaps = 2/192 (1%)
Frame = -1
Query: 590 VPEIVSLLKTTDHNDWISNSQL--LEFLNTPPSPTSLLKLTRQLGSTEKALQFFEFFKTH 417
V + V L+ T +DW S+ L L ++ SP ++TR+LGS A+ FFE+
Sbjct: 45 VVKFVKTLQNTPQHDWASSESLSALVVSSSSASPLVFSQITRRLGSYSLAISFFEYLDAK 104
Query: 416 XXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIRCF 237
S Q+++E A E D KL +L+ AK++ IPL+I A LLIR F
Sbjct: 105 SQSLKRREESLSLALQSVIEFAGSEP--DPRDKLLRLYEIAKEKNIPLTIVATKLLIRWF 162
Query: 236 GRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPPND 57
GR M+ +S+ VY LDSN +N+ V N+++D L R DD FKVLDEML+++S FPPN
Sbjct: 163 GRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNR 222
Query: 56 STIDIVLSAMWK 21
T DIVL +WK
Sbjct: 223 ITADIVLHEVWK 234
>ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183498|sp|Q9M316.1|PP292_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g61520, mitochondrial; Flags: Precursor
gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis
thaliana] gi|332646696|gb|AEE80217.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 136 bits (343), Expect = 8e-30
Identities = 78/192 (40%), Positives = 110/192 (57%), Gaps = 2/192 (1%)
Frame = -1
Query: 590 VPEIVSLLKTTDHNDWISNSQL--LEFLNTPPSPTSLLKLTRQLGSTEKALQFFEFFKTH 417
V + V L+ T +DW S+ L L ++ SP ++TR+LGS A+ FFE+
Sbjct: 45 VVKFVKTLQKTPQHDWASSESLSALVVSSSSASPLVFSQITRRLGSYSLAISFFEYLDAK 104
Query: 416 XXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIRCF 237
S Q+++E A E D KL +L+ AK++ IPL++ A LLIR F
Sbjct: 105 SQSLKRREESLSLALQSVIEFAGSEP--DPRDKLLRLYEIAKEKNIPLTVVATNLLIRWF 162
Query: 236 GRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPPND 57
GR M+ +S+ VY LDSN +N+ V N+++D L R DD FKVLDEML+++S FPPN
Sbjct: 163 GRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNR 222
Query: 56 STIDIVLSAMWK 21
T DIVL +WK
Sbjct: 223 ITADIVLHEVWK 234
>gb|AAM61467.1| unknown [Arabidopsis thaliana]
Length = 766
Score = 136 bits (343), Expect = 8e-30
Identities = 78/192 (40%), Positives = 110/192 (57%), Gaps = 2/192 (1%)
Frame = -1
Query: 590 VPEIVSLLKTTDHNDWISNSQL--LEFLNTPPSPTSLLKLTRQLGSTEKALQFFEFFKTH 417
V + V L+ T +DW S+ L L ++ SP ++TR+LGS A+ FFE+
Sbjct: 45 VVKFVKTLQNTPQHDWASSESLSALVVSSSSASPLVFSQITRRLGSYSLAISFFEYLDAK 104
Query: 416 XXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIRCF 237
S Q+++E A E D KL +L+ AK++ IPL++ A LLIR F
Sbjct: 105 SQSLKRREESLSLALQSVIEFAGSEP--DPRDKLLRLYEIAKEKNIPLTVVATKLLIRWF 162
Query: 236 GRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPPND 57
GR M+ +S+ VY LDSN +N+ V N+++D L R DD FKVLDEML+++S FPPN
Sbjct: 163 GRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNR 222
Query: 56 STIDIVLSAMWK 21
T DIVL +WK
Sbjct: 223 ITADIVLHEVWK 234
>ref|XP_006409459.1| hypothetical protein EUTSA_v10022571mg [Eutrema salsugineum]
gi|557110621|gb|ESQ50912.1| hypothetical protein
EUTSA_v10022571mg [Eutrema salsugineum]
Length = 766
Score = 134 bits (337), Expect = 4e-29
Identities = 75/185 (40%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Frame = -1
Query: 569 LKTTDHNDWISNSQLLEFL--NTPPSPTSLLKLTRQLGSTEKALQFFEFFKTHXXXXXXX 396
L+ +DW+S+ L L ++ SP ++TR+LGS A+ FFE+
Sbjct: 52 LQKIPQHDWVSSESLSSLLASSSSVSPLVFSQITRRLGSYSLAVSFFEYLDAKSQSLERR 111
Query: 395 XXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIRCFGRAKMLE 216
S FQ+++E A E D KL +L+ AK++ IPL++ A LLIR FGR M
Sbjct: 112 EDALSLVFQSVIEFAGSEP--DSRDKLLRLYEIAKEKNIPLTVVATKLLIRWFGRMGMAN 169
Query: 215 ESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPPNDSTIDIVL 36
+SI VY +LDSN +NT V N+++D L + DD FKVLDEML+++S FPPN T DIV
Sbjct: 170 QSILVYEQLDSNMQNTQVRNVVIDVLLKNGLADDAFKVLDEMLRKESVFPPNRITADIVF 229
Query: 35 SAMWK 21
+W+
Sbjct: 230 HEVWR 234
>ref|XP_006292416.1| hypothetical protein CARUB_v10018630mg [Capsella rubella]
gi|482561123|gb|EOA25314.1| hypothetical protein
CARUB_v10018630mg [Capsella rubella]
Length = 767
Score = 133 bits (335), Expect = 7e-29
Identities = 77/194 (39%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Frame = -1
Query: 596 SAVPEIVSLLKTTDHNDWISNSQLLEFL--NTPPSPTSLLKLTRQLGSTEKALQFFEFFK 423
S V + + L+ +DW S+ L L ++ SP ++TR+LGS A+ FFE+
Sbjct: 43 SVVAKFLENLQRLPQHDWASSESLSSLLVSSSSVSPLVFPQITRRLGSYSLAISFFEYLD 102
Query: 422 THXXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIR 243
S T Q+++E A E S KL QL+ A ++ IP ++ A LLIR
Sbjct: 103 ATSQSLKRREESLSLTLQSVIEFAGSEPDSQ--DKLLQLYEIAIEKNIPFTVVATKLLIR 160
Query: 242 CFGRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPP 63
FGR M+ +S+ VY LDSN +NT V N++++ L R DD FKVLDEM ++DS FPP
Sbjct: 161 WFGRMGMVNQSVLVYERLDSNMKNTQVRNVVIEVLLRNGLVDDAFKVLDEMFQKDSVFPP 220
Query: 62 NDSTIDIVLSAMWK 21
N T DIVL +WK
Sbjct: 221 NRITADIVLHEVWK 234
>ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324225|gb|EFH54646.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 766
Score = 132 bits (333), Expect = 1e-28
Identities = 76/192 (39%), Positives = 109/192 (56%), Gaps = 2/192 (1%)
Frame = -1
Query: 590 VPEIVSLLKTTDHNDWISNSQLLEFL--NTPPSPTSLLKLTRQLGSTEKALQFFEFFKTH 417
V + + L+ +DW S+ L L ++ SP ++TR+LGS A+ FFE+ +
Sbjct: 45 VVKFLKNLQKIPQHDWASSESLSSLLVSSSSHSPLVFSQITRRLGSYSLAISFFEYLDSK 104
Query: 416 XXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIRCF 237
S Q+++E A E D KL +L+ AK++ IPL++ A LLIR F
Sbjct: 105 SQSLKRREESLSLALQSVIEFAGSEP--DSRDKLLRLYEIAKEKNIPLTVVATKLLIRWF 162
Query: 236 GRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPPND 57
GR M +S+ VY LDSN +N+ V N+++D L R DD FKVLDEML+++S FPPN
Sbjct: 163 GRMGMANQSVLVYERLDSNMKNSQVRNVVIDVLLRNGLVDDAFKVLDEMLQKESVFPPNR 222
Query: 56 STIDIVLSAMWK 21
T DIVL +WK
Sbjct: 223 ITADIVLHEVWK 234
>ref|XP_006397795.1| hypothetical protein EUTSA_v10001319mg [Eutrema salsugineum]
gi|557098868|gb|ESQ39248.1| hypothetical protein
EUTSA_v10001319mg [Eutrema salsugineum]
Length = 776
Score = 131 bits (330), Expect = 3e-28
Identities = 73/188 (38%), Positives = 113/188 (60%), Gaps = 2/188 (1%)
Frame = -1
Query: 596 SAVPEIVSLLKTTDHNDWISNSQLLE--FLNTPPSPTSLLKLTRQLGSTEKALQFFEFFK 423
S E + L+ +DW+S +LL+ L++ SP ++TR+L S A+ F ++
Sbjct: 44 SVAREFLEHLRDIPQHDWVS-CELLDSLLLSSSSSPRVFSQITRRLDSYSLAVSFLDYLN 102
Query: 422 THXXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIR 243
+ FQ+++E A +E D KL +L+ +K++++PL+ NAA LLIR
Sbjct: 103 EKSESLKHRDESLAVAFQSVIEYACKEP--DSRDKLLKLYETSKEKKVPLTFNAAKLLIR 160
Query: 242 CFGRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPP 63
FGR ML +S+ VY ELD + +NT+V N+ +D L +G DD KVLDEML+++S FPP
Sbjct: 161 WFGRLGMLNQSVLVYEELDPDVKNTHVRNVFIDLLLQGGLVDDALKVLDEMLEKESIFPP 220
Query: 62 NDSTIDIV 39
N+ST+DIV
Sbjct: 221 NESTVDIV 228
>ref|XP_002511922.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549102|gb|EEF50591.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 346
Score = 124 bits (311), Expect = 4e-26
Identities = 76/195 (38%), Positives = 115/195 (58%), Gaps = 2/195 (1%)
Frame = -1
Query: 596 SAVPEIVSLLKTTDHNDWISNSQLLEFLNTPPSPTSLLKLTRQLGSTEKALQFFEFFKTH 417
S + V LL+ DH + L F PSP L ++ R+L S+ +AL+F ++ + +
Sbjct: 59 SIIKRAVQLLQIPDHEWNTTQLNNLIFSALSPSPRLLFQIARRLPSSSQALKFLKYLQNN 118
Query: 416 XXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIRCF 237
TFQAI E A+RE+ D + L++L+ +K+ IPL+IN+ATLL+R F
Sbjct: 119 FPTSNTQHLSS--TFQAIFELASREN--DSRTNLYELYKVSKEWNIPLTINSATLLLRFF 174
Query: 236 GRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFP--P 63
GR ++E+S ++NEL+ +NT+V NL++D L R DD FKVLDEML+ S F P
Sbjct: 175 GRIGLVEKSFILFNELEHCIKNTHVRNLMVDLLLRDGRVDDAFKVLDEMLQPGSEFDLRP 234
Query: 62 NDSTIDIVLSAMWKR 18
+D T DI+ + + KR
Sbjct: 235 DDVTGDIIFTWLMKR 249
>gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis]
Length = 769
Score = 123 bits (309), Expect = 7e-26
Identities = 70/163 (42%), Positives = 101/163 (61%)
Frame = -1
Query: 503 PSPTSLLKLTRQLGSTEKALQFFEFFKTHXXXXXXXXXXXSFTFQAILEQATREDKSDVP 324
PSPT LL + R+L S+ KAL FF+ + + S TFQA+LE A+RE +
Sbjct: 78 PSPTRLLHIARRLDSSSKALNFFDHVRENSHLPKDSSLLAS-TFQAVLELASREPSWE-- 134
Query: 323 SKLFQLFSFAKDREIPLSINAATLLIRCFGRAKMLEESISVYNELDSNSRNTNVVNLLLD 144
+LF+L++ +++R +PL+INAATLL CFGRA M EE ++V LD + +NT+ +N ++D
Sbjct: 135 KRLFELYTTSRERNVPLTINAATLLFVCFGRAGMREELMTVLKGLDDDCKNTHALNRVID 194
Query: 143 CLFRGANTDDGFKVLDEMLKRDSGFPPNDSTIDIVLSAMWKRN 15
L R DD VLDEML+ D FPPN+ T + V + R+
Sbjct: 195 VLLRLGCVDDALHVLDEMLEPDGKFPPNEVTGNAVFPLLLNRD 237
>ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 771
Score = 119 bits (297), Expect = 2e-24
Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 5/234 (2%)
Frame = -1
Query: 722 TTKSLLHL--PTRPKSGI-IAGVRHFSGEXXXXXXXXXXXXXXTSSAVPEIVSLLKTTDH 552
++K LLHL P PKS + + H S V +++ LL+ +
Sbjct: 3 SSKPLLHLLKPQTPKSNSPLFLLTHHLCTNPISNPHHDDDDDYDDSLVTQVLQLLQPNEQ 62
Query: 551 NDWISNSQLLEFLNTP--PSPTSLLKLTRQLGSTEKALQFFEFFKTHXXXXXXXXXXXSF 378
+ Q L F N+ PSP SLL +TR+L S KAL+FF+F + S
Sbjct: 63 HWNFPQLQTLLFPNSTSSPSPRSLLHITRRLASPNKALKFFDFVSQNLTPQDPPKALLSS 122
Query: 377 TFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATLLIRCFGRAKMLEESISVY 198
+FQA++E R+ S+ + L++L+ AKDR +P+S AA LL++ GRA M EE++ V+
Sbjct: 123 SFQALVELTLRQPPSE--TNLYELYKMAKDRNVPISPKAAGLLVQSMGRAGMEEEALIVF 180
Query: 197 NELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSGFPPNDSTIDIVL 36
NEL+S + T++ N+++ + D KVLDEML ++ F ++ T+D+V+
Sbjct: 181 NELESGLKTTHIRNVVIGMSLKMGRVDGALKVLDEMLDPEANFQVDEYTVDVVV 234
>ref|XP_002320827.2| pentatricopeptide repeat-containing family protein, partial
[Populus trichocarpa] gi|550323783|gb|EEE99142.2|
pentatricopeptide repeat-containing family protein,
partial [Populus trichocarpa]
Length = 720
Score = 113 bits (282), Expect = 1e-22
Identities = 73/201 (36%), Positives = 120/201 (59%), Gaps = 7/201 (3%)
Frame = -1
Query: 599 SSAVPEIVSLLKTTDHNDWISN--SQLLEFLNTPPSPTS---LLKLTRQLGSTEKALQFF 435
+S + E + LL+ N+W + +QLL F ++PPS +S ++TR+L S+ +AL+F
Sbjct: 3 NSIITEALQLLQIPG-NEWNTTQLNQLL-FTDSPPSSSSPRLFYQITRRLPSSSQALKFL 60
Query: 434 EFFKTHXXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAAT 255
+ + + S+TFQAI E A E S+ + L +L+ +K+ IPL++NAA+
Sbjct: 61 NYLQNNSPSSPDTQSLLSYTFQAIFELAFCEPDSN--ANLSRLYKTSKELNIPLTVNAAS 118
Query: 254 LLIRCFGRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKR-- 81
L+R GR++++EES+ ++N+LD + +NT + N+ L L R D KV+DEM +
Sbjct: 119 FLLRASGRSELVEESLILFNDLDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESND 178
Query: 80 DSGFPPNDSTIDIVLSAMWKR 18
DS PND+T DI+ S + KR
Sbjct: 179 DSNCRPNDATGDILFSFLLKR 199
>ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 763
Score = 107 bits (268), Expect = 4e-21
Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 5/193 (2%)
Frame = -1
Query: 596 SAVPEIVSLLKTTDHNDWISNSQLLEFLNTP-----PSPTSLLKLTRQLGSTEKALQFFE 432
S + +++ +L+ N+ N L L P PSP +LL +TR L S KAL+FF+
Sbjct: 42 SIITQVLQVLQVLQPNEQHWNFPQLHTLLFPSSTSSPSPRTLLHITRCLASPTKALKFFD 101
Query: 431 FFKTHXXXXXXXXXXXSFTFQAILEQATREDKSDVPSKLFQLFSFAKDREIPLSINAATL 252
F + S +F+A++E R+ S+ + L++L+ AKDR +P+S A L
Sbjct: 102 FVSQNLTPQDPPKAVLSSSFEALVELTLRQPPSE--TNLYELYKMAKDRNVPISPKAVRL 159
Query: 251 LIRCFGRAKMLEESISVYNELDSNSRNTNVVNLLLDCLFRGANTDDGFKVLDEMLKRDSG 72
L++ RA M EE++ V+NELDS + T + N + L + DD KVLDEML ++
Sbjct: 160 LVQSMRRAGMEEEALLVFNELDSALKTTFIRNEAIGLLLKMGRVDDALKVLDEMLDPEAK 219
Query: 71 FPPNDSTIDIVLS 33
F +D T+ + LS
Sbjct: 220 FQVDDFTVGLFLS 232