BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00024162
         (640 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345588.1| PREDICTED: small nuclear ribonucleoprotein-a...   104   2e-20
ref|XP_004240099.1| PREDICTED: small nuclear ribonucleoprotein-a...   104   2e-20
ref|XP_004229936.1| PREDICTED: small nuclear ribonucleoprotein-a...   100   4e-19
ref|XP_006339560.1| PREDICTED: small nuclear ribonucleoprotein-a...    97   3e-18
ref|XP_004955557.1| PREDICTED: small nuclear ribonucleoprotein-a...    92   2e-16
tpg|DAA59680.1| TPA: small nuclear ribonucleoprotein-associated ...    92   2e-16
dbj|BAJ96909.1| predicted protein [Hordeum vulgare subsp. vulgare]     92   2e-16
ref|XP_002459385.1| hypothetical protein SORBIDRAFT_02g003850 [S...    92   2e-16
ref|NP_001140478.1| small nuclear ribonucleoprotein-associated p...    92   2e-16
ref|XP_006413865.1| hypothetical protein EUTSA_v10026002mg [Eutr...    90   5e-16
gb|EOY25600.1| Small nuclear ribonucleoprotein associated protei...    90   5e-16
ref|XP_006284390.1| hypothetical protein CARUB_v10005560mg [Caps...    90   5e-16
ref|NP_193777.1| small nuclear ribonucleoprotein associated prot...    90   5e-16
ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arab...    90   5e-16
ref|NP_001148524.1| small nuclear ribonucleoprotein-associated p...    90   5e-16
ref|XP_006468385.1| PREDICTED: small nuclear ribonucleoprotein-a...    90   6e-16
ref|XP_006448808.1| hypothetical protein CICLE_v10018122mg [Citr...    90   6e-16
ref|NP_199263.1| small nuclear ribonucleoprotein family protein ...    88   2e-15
ref|XP_006377906.1| hypothetical protein POPTR_0011s15920g [Popu...    88   2e-15
ref|XP_006377905.1| small nuclear ribonucleoprotein associated p...    88   2e-15

>ref|XP_006345588.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B'-like [Solanum tuberosum]
          Length = 273

 Score =  104 bits (259), Expect = 2e-20
 Identities = 53/75 (70%), Positives = 57/75 (76%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPPDDSRVKAT AGGV+                 GP+VHAQPGLAGP+R
Sbjct: 75  EEVISMTVEGPPPPDDSRVKAT-AGGVSAVPGPGLGRAAGRGVPTGPMVHAQPGLAGPVR 133

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 134 GVGGPAPGMMQPQIS 148


>ref|XP_004240099.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B'-like isoform 1 [Solanum lycopersicum]
           gi|460388897|ref|XP_004240100.1| PREDICTED: small
           nuclear ribonucleoprotein-associated protein B'-like
           isoform 2 [Solanum lycopersicum]
           gi|460388899|ref|XP_004240101.1| PREDICTED: small
           nuclear ribonucleoprotein-associated protein B'-like
           isoform 3 [Solanum lycopersicum]
           gi|460388901|ref|XP_004240102.1| PREDICTED: small
           nuclear ribonucleoprotein-associated protein B'-like
           isoform 4 [Solanum lycopersicum]
          Length = 274

 Score =  104 bits (259), Expect = 2e-20
 Identities = 53/75 (70%), Positives = 57/75 (76%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPPDDSRVKAT AGGV+                 GP+VHAQPGLAGP+R
Sbjct: 75  EEVISMTVEGPPPPDDSRVKAT-AGGVSAVPGPGLGRAAGRGVPTGPMVHAQPGLAGPVR 133

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 134 GVGGPAPGMMQPQIS 148


>ref|XP_004229936.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B'-like [Solanum lycopersicum]
          Length = 275

 Score =  100 bits (249), Expect = 4e-19
 Identities = 51/75 (68%), Positives = 55/75 (73%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPPDDSRVKAT+AG                    GPLVHAQPGLAGP+R
Sbjct: 75  EEVISMTVEGPPPPDDSRVKATTAGSA--VSGPGIGRAAGRGVPTGPLVHAQPGLAGPVR 132

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQ+S
Sbjct: 133 GVGGPAPGMMQPQLS 147


>ref|XP_006339560.1| PREDICTED: small nuclear ribonucleoprotein-associated proteins B
           and B'-like [Solanum tuberosum]
          Length = 271

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 49/75 (65%), Positives = 54/75 (72%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPPD+SRVK T+AG                    GPLVHAQPGLAGP+R
Sbjct: 75  EEVISMTVEGPPPPDESRVKGTTAGSA--VSGPGIGRPAGRGIPTGPLVHAQPGLAGPVR 132

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQ+S
Sbjct: 133 GVGGPAPGMMQPQLS 147


>ref|XP_004955557.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B'-like [Setaria italica]
          Length = 264

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 46/75 (61%), Positives = 52/75 (69%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEV+SMTVEGPPPPD+SR KA +AGG                   GPL+ A PGLAGP+R
Sbjct: 77  EEVVSMTVEGPPPPDESRAKAAAAGGA--LAGPGVGRAAGRGVPTGPLLQAAPGLAGPVR 134

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 135 GVGGPAPGMMQPQIS 149


>tpg|DAA59680.1| TPA: small nuclear ribonucleoprotein-associated protein B [Zea
           mays]
          Length = 263

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 46/75 (61%), Positives = 52/75 (69%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEV+SMTVEGPPPPD+SR KA +AGG                   GPL+ A PGLAGP+R
Sbjct: 77  EEVVSMTVEGPPPPDESRAKAAAAGGA--LAGPGIGRAAGRGVPTGPLLQAAPGLAGPVR 134

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 135 GVGGPAPGMMQPQIS 149


>dbj|BAJ96909.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 264

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 45/75 (60%), Positives = 53/75 (70%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEV+SMTVEGPPPPD+SR KA++ GG                   GPL+ AQPGL+GP+R
Sbjct: 77  EEVVSMTVEGPPPPDESRAKASAGGGA--LSGTGVGRAAGRGVATGPLLQAQPGLSGPVR 134

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 135 GVGGPAPGMMQPQIS 149


>ref|XP_002459385.1| hypothetical protein SORBIDRAFT_02g003850 [Sorghum bicolor]
           gi|241922762|gb|EER95906.1| hypothetical protein
           SORBIDRAFT_02g003850 [Sorghum bicolor]
          Length = 262

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 46/75 (61%), Positives = 52/75 (69%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEV+SMTVEGPPPPD+SR KA +AGG                   GPL+ A PGLAGP+R
Sbjct: 77  EEVVSMTVEGPPPPDESRAKAAAAGGA--LAGPGVGRAAGRGVPTGPLLQAAPGLAGPVR 134

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 135 GVGGPAPGMMQPQIS 149


>ref|NP_001140478.1| small nuclear ribonucleoprotein-associated protein B [Zea mays]
           gi|194699658|gb|ACF83913.1| unknown [Zea mays]
           gi|195606200|gb|ACG24930.1| small nuclear
           ribonucleoprotein-associated protein B [Zea mays]
           gi|414592013|tpg|DAA42584.1| TPA: Small nuclear
           ribonucleoprotein-associated protein B [Zea mays]
          Length = 263

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 46/75 (61%), Positives = 52/75 (69%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEV+SMTVEGPPPPD+SR KA +AGG                   GPL+ A PGLAGP+R
Sbjct: 77  EEVVSMTVEGPPPPDESRAKAAAAGGA--LAGPGVGRAAGRGVPTGPLLQAAPGLAGPVR 134

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 135 GVGGPAPGMMQPQIS 149


>ref|XP_006413865.1| hypothetical protein EUTSA_v10026002mg [Eutrema salsugineum]
           gi|557115035|gb|ESQ55318.1| hypothetical protein
           EUTSA_v10026002mg [Eutrema salsugineum]
          Length = 263

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 47/75 (62%), Positives = 52/75 (69%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPP++SR KA SA  V                  GPLV AQPGL+GP+R
Sbjct: 77  EEVISMTVEGPPPPEESRAKAGSAAAV---AGPGIGRAAGRGVPTGPLVQAQPGLSGPVR 133

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 134 GVGGPAPGMMQPQIS 148


>gb|EOY25600.1| Small nuclear ribonucleoprotein associated protein B [Theobroma
           cacao]
          Length = 291

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 47/75 (62%), Positives = 52/75 (69%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPP++SR KA SA  V                  GPLV AQPGLAGP+R
Sbjct: 80  EEVISMTVEGPPPPEESRSKAASANAV---PGPGVGRAAGRGIPTGPLVQAQPGLAGPVR 136

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQ+S
Sbjct: 137 GVGGPAPGMMQPQMS 151


>ref|XP_006284390.1| hypothetical protein CARUB_v10005560mg [Capsella rubella]
           gi|565445302|ref|XP_006284391.1| hypothetical protein
           CARUB_v10005560mg [Capsella rubella]
           gi|482553095|gb|EOA17288.1| hypothetical protein
           CARUB_v10005560mg [Capsella rubella]
           gi|482553096|gb|EOA17289.1| hypothetical protein
           CARUB_v10005560mg [Capsella rubella]
          Length = 254

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 47/75 (62%), Positives = 52/75 (69%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPP++SR KA SA  V                  GPLV AQPGL+GP+R
Sbjct: 77  EEVISMTVEGPPPPEESRAKAGSAAAV---AGPGIGRAAGRGVPTGPLVQAQPGLSGPVR 133

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 134 GVGGPAPGMMQPQIS 148


>ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|30685110|ref|NP_849414.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|79325195|ref|NP_001031682.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|238480869|ref|NP_001154258.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|5262167|emb|CAB45810.1| putative snRNP
           protein [Arabidopsis thaliana]
           gi|7268840|emb|CAB79044.1| putative snRNP protein
           [Arabidopsis thaliana] gi|28393634|gb|AAO42236.1|
           putative snRNP protein [Arabidopsis thaliana]
           gi|28827492|gb|AAO50590.1| putative snRNP protein
           [Arabidopsis thaliana] gi|222423490|dbj|BAH19715.1|
           AT4G20440 [Arabidopsis thaliana]
           gi|332658930|gb|AEE84330.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658931|gb|AEE84331.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658932|gb|AEE84332.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658933|gb|AEE84333.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana]
          Length = 257

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 47/75 (62%), Positives = 52/75 (69%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPP++SR KA SA  V                  GPLV AQPGL+GP+R
Sbjct: 77  EEVISMTVEGPPPPEESRAKAGSAAAV---AGPGIGRAAGRGVPTGPLVQAQPGLSGPVR 133

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 134 GVGGPAPGMMQPQIS 148


>ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
           lyrata] gi|297313716|gb|EFH44139.1| hypothetical protein
           ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 47/75 (62%), Positives = 52/75 (69%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPP++SR KA SA  V                  GPLV AQPGL+GP+R
Sbjct: 77  EEVISMTVEGPPPPEESRAKAGSAAAV---AGPGIGRAAGRGVPTGPLVQAQPGLSGPVR 133

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 134 GVGGPAPGMMQPQIS 148


>ref|NP_001148524.1| small nuclear ribonucleoprotein-associated protein B [Zea mays]
           gi|195620004|gb|ACG31832.1| small nuclear
           ribonucleoprotein-associated protein B [Zea mays]
          Length = 263

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 45/74 (60%), Positives = 51/74 (68%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEV+SMTVEGPPPPD+SR KA +AGG                   GPL+ A PGLAGP+R
Sbjct: 77  EEVVSMTVEGPPPPDESRAKAAAAGGAXAGPGIGRAAGRGVPT--GPLLQAAPGLAGPVR 134

Query: 222 GVGGPAPGIMQPQI 263
           GVGGPAPG+MQPQI
Sbjct: 135 GVGGPAPGMMQPQI 148


>ref|XP_006468385.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B'-like isoform X1 [Citrus sinensis]
          Length = 286

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 47/75 (62%), Positives = 51/75 (68%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPP++SR KA SA  V                   PLV AQPGLAGP+R
Sbjct: 79  EEVISMTVEGPPPPEESRAKAVSASAV---AGPGIGRAAGRGVPAAPLVQAQPGLAGPVR 135

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 136 GVGGPAPGMMQPQIS 150


>ref|XP_006448808.1| hypothetical protein CICLE_v10018122mg [Citrus clementina]
           gi|557551419|gb|ESR62048.1| hypothetical protein
           CICLE_v10018122mg [Citrus clementina]
          Length = 286

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 47/75 (62%), Positives = 51/75 (68%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPP++SR KA SA  V                   PLV AQPGLAGP+R
Sbjct: 79  EEVISMTVEGPPPPEESRAKAVSASAV---VGPGIGRAAGRGVPAAPLVQAQPGLAGPVR 135

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGPAPG+MQPQIS
Sbjct: 136 GVGGPAPGMMQPQIS 150


>ref|NP_199263.1| small nuclear ribonucleoprotein family protein [Arabidopsis
           thaliana] gi|79329893|ref|NP_001032011.1| small nuclear
           ribonucleoprotein family protein [Arabidopsis thaliana]
           gi|9758703|dbj|BAB09157.1| unnamed protein product
           [Arabidopsis thaliana] gi|14596137|gb|AAK68796.1|
           Unknown protein [Arabidopsis thaliana]
           gi|18377438|gb|AAL66885.1| unknown protein [Arabidopsis
           thaliana] gi|51971895|dbj|BAD44612.1| unknown protein
           [Arabidopsis thaliana] gi|62320496|dbj|BAD95039.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332007733|gb|AED95116.1| small nuclear
           ribonucleoprotein family protein [Arabidopsis thaliana]
           gi|332007734|gb|AED95117.1| small nuclear
           ribonucleoprotein family protein [Arabidopsis thaliana]
          Length = 254

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 44/75 (58%), Positives = 51/75 (68%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPP++SR K+   G V                  GPLV AQPGL+GP+R
Sbjct: 78  EEVISMTVEGPPPPEESRAKS---GSVTAVAGPGIGRAAGRGVPTGPLVQAQPGLSGPVR 134

Query: 222 GVGGPAPGIMQPQIS 266
           G+GGPAPG+MQPQIS
Sbjct: 135 GIGGPAPGMMQPQIS 149


>ref|XP_006377906.1| hypothetical protein POPTR_0011s15920g [Populus trichocarpa]
           gi|566195739|ref|XP_006377907.1| hypothetical protein
           POPTR_0011s15920g [Populus trichocarpa]
           gi|550328500|gb|ERP55703.1| hypothetical protein
           POPTR_0011s15920g [Populus trichocarpa]
           gi|550328501|gb|ERP55704.1| hypothetical protein
           POPTR_0011s15920g [Populus trichocarpa]
          Length = 286

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 45/75 (60%), Positives = 51/75 (68%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPP++SR KA SA  V                   PLV AQPGLAGP+R
Sbjct: 77  EEVISMTVEGPPPPEESRAKAVSAAAV---AGPGLGRAAGRGIPTAPLVQAQPGLAGPVR 133

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGP+PG+MQPQ+S
Sbjct: 134 GVGGPSPGMMQPQLS 148


>ref|XP_006377905.1| small nuclear ribonucleoprotein associated protein B [Populus
           trichocarpa] gi|550328499|gb|ERP55702.1| small nuclear
           ribonucleoprotein associated protein B [Populus
           trichocarpa]
          Length = 250

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 45/75 (60%), Positives = 51/75 (68%)
 Frame = +3

Query: 42  EEVISMTVEGPPPPDDSRVKATSAGGVNXXXXXXXXXXXXXXXXIGPLVHAQPGLAGPLR 221
           EEVISMTVEGPPPP++SR KA SA  V                   PLV AQPGLAGP+R
Sbjct: 77  EEVISMTVEGPPPPEESRAKAVSAAAV---AGPGLGRAAGRGIPTAPLVQAQPGLAGPVR 133

Query: 222 GVGGPAPGIMQPQIS 266
           GVGGP+PG+MQPQ+S
Sbjct: 134 GVGGPSPGMMQPQLS 148