BLASTX nr result
ID: Atropa21_contig00024135
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00024135 (472 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g... 270 1e-70 ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g... 269 2e-70 ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g... 206 3e-51 emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera] 204 1e-50 ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g... 199 2e-49 ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citr... 194 8e-48 ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citr... 194 8e-48 ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g... 194 1e-47 gb|AEV43362.1| poly C-binding protein [Citrus sinensis] 194 1e-47 gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [... 188 6e-46 gb|EOY04206.1| RNA-binding KH domain-containing protein isoform ... 187 9e-46 gb|EOY04205.1| RNA-binding KH domain-containing protein isoform ... 187 9e-46 gb|EOY04203.1| RNA-binding KH domain-containing protein isoform ... 187 9e-46 gb|EOY04202.1| RNA-binding KH domain-containing protein isoform ... 187 9e-46 ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ... 187 1e-45 ref|XP_004306018.1| PREDICTED: KH domain-containing protein At4g... 185 6e-45 ref|XP_002329331.1| predicted protein [Populus trichocarpa] gi|5... 184 8e-45 ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g... 150 2e-34 gb|AAP54423.2| KH domain containing protein, expressed [Oryza sa... 148 6e-34 ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] g... 148 6e-34 >ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1 [Solanum tuberosum] gi|565383832|ref|XP_006358054.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X2 [Solanum tuberosum] Length = 705 Score = 270 bits (690), Expect = 1e-70 Identities = 134/156 (85%), Positives = 146/156 (93%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRGVQDEN 182 ++SSPSTKLAR+Q+ DKNN+NPET+EEN MEPHCAAQDALLKVHNRIVEEDL+GVQ+E+ Sbjct: 93 IVSSPSTKLARRQNNDKNNDNPETKEENCSMEPHCAAQDALLKVHNRIVEEDLQGVQNED 152 Query: 183 NNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELVQI 362 +E IITRLLVPN LVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAM+TDELVQI Sbjct: 153 KSETVIITRLLVPNNLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMTTDELVQI 212 Query: 363 SGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVHG 470 SGKPALV+KALYEVSTLLHQNPRKDKP SF MVHG Sbjct: 213 SGKPALVKKALYEVSTLLHQNPRKDKPISSFPMVHG 248 Score = 77.4 bits (189), Expect = 2e-12 Identities = 42/114 (36%), Positives = 66/114 (57%) Frame = +3 Query: 96 EPHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKL 275 +P DA+L++ ++ E +G+ + TRLL P+ VGC++G+ G VI ++ Sbjct: 373 DPRSRTIDAILQLQSKTSEFSDKGI---------VTTRLLFPSNKVGCIIGQGGQVINEM 423 Query: 276 RSETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 R T A IRVLS + P CA + +ELVQISG + + AL E+S+ L + +D Sbjct: 424 RRRTQADIRVLSKDDKPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRD 477 >ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum lycopersicum] Length = 707 Score = 269 bits (688), Expect = 2e-70 Identities = 135/156 (86%), Positives = 145/156 (92%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRGVQDEN 182 +ISSPSTKLAR+Q+ DKNN+NPET+EEN MEPHCAAQDALLKVHNRIVEEDL GVQ+E+ Sbjct: 93 IISSPSTKLARRQNNDKNNDNPETKEENYSMEPHCAAQDALLKVHNRIVEEDLLGVQNED 152 Query: 183 NNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELVQI 362 +E IITRLLVPN LVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAM+TDELVQI Sbjct: 153 KSEAVIITRLLVPNNLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMTTDELVQI 212 Query: 363 SGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVHG 470 SGKPALV+KALYEVSTLLHQNPRKDKP SF MVHG Sbjct: 213 SGKPALVKKALYEVSTLLHQNPRKDKPISSFPMVHG 248 Score = 77.8 bits (190), Expect = 1e-12 Identities = 42/114 (36%), Positives = 66/114 (57%) Frame = +3 Query: 96 EPHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKL 275 +P DA+L++ ++ E +G+ + TRLL P+ VGC++G+ G VI ++ Sbjct: 373 DPRSRTIDAILQLQSKTSEFSDKGI---------VTTRLLFPSNKVGCIIGQGGQVINEM 423 Query: 276 RSETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 R T A IRVLS + P CA + +ELVQISG + + AL E+S+ L + +D Sbjct: 424 RRRTQADIRVLSKDEKPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRD 477 >ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis vinifera] gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera] Length = 676 Score = 206 bits (523), Expect = 3e-51 Identities = 107/158 (67%), Positives = 127/158 (80%), Gaps = 2/158 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDL-RGVQDE 179 +I S TK ++ D+ NE+PE EE D MEPHC AQDAL+KVH RI+EEDL G + E Sbjct: 93 IIYSAPTKNPKEHDS---NEDPEMEEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFE 149 Query: 180 NNNEIEIIT-RLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELV 356 ++NE ++T RLLVPN +VGCLLG++GDVIQ+LRSETGA+IRVL AEHLP CAMS+DELV Sbjct: 150 DDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELV 209 Query: 357 QISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVHG 470 QISGKPA+ +KALYEVSTLLHQNPRKDKP SF M G Sbjct: 210 QISGKPAVAKKALYEVSTLLHQNPRKDKPPSSFPMSFG 247 Score = 72.8 bits (177), Expect = 4e-11 Identities = 43/113 (38%), Positives = 63/113 (55%) Frame = +3 Query: 99 PHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLR 278 P +A+L++ N+ E +G + TRLLVP++ VGC+LG+ G VI ++R Sbjct: 372 PRSQTIEAILQLQNKTSEYSDKG---------GMTTRLLVPSSKVGCILGQGGHVINEMR 422 Query: 279 SETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 T A IRV S E P CA +ELVQISG + + AL E+++ L +D Sbjct: 423 RRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRD 475 >emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera] Length = 668 Score = 204 bits (518), Expect = 1e-50 Identities = 106/158 (67%), Positives = 127/158 (80%), Gaps = 2/158 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDL-RGVQDE 179 +I S TK ++ ++ NE+PE EE D MEPHC AQDAL+KVH RI+EEDL G + E Sbjct: 121 IIYSAPTKNPKEHNS---NEDPEREEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFE 177 Query: 180 NNNEIEIIT-RLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELV 356 ++NE ++T RLLVPN +VGCLLG++GDVIQ+LRSETGA+IRVL AEHLP CAMS+DELV Sbjct: 178 DDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELV 237 Query: 357 QISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVHG 470 QISGKPA+ +KALYEVSTLLHQNPRKDKP SF M G Sbjct: 238 QISGKPAVAKKALYEVSTLLHQNPRKDKPPSSFPMSFG 275 Score = 72.8 bits (177), Expect = 4e-11 Identities = 43/113 (38%), Positives = 63/113 (55%) Frame = +3 Query: 99 PHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLR 278 P +A+L++ N+ E +G + TRLLVP++ VGC+LG+ G VI ++R Sbjct: 400 PRSQTIEAILQLQNKTSEYSDKG---------GMTTRLLVPSSKVGCILGQGGHVINEMR 450 Query: 279 SETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 T A IRV S E P CA +ELVQISG + + AL E+++ L +D Sbjct: 451 RRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRD 503 >ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria vesca subsp. vesca] Length = 760 Score = 199 bits (507), Expect = 2e-49 Identities = 103/157 (65%), Positives = 126/157 (80%), Gaps = 1/157 (0%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLR-GVQDE 179 +I SP TK++RKQ++D E+ +E +EPHCAAQDALLKVH+RIVEEDL GV + Sbjct: 94 IIFSPPTKISRKQNSD---EDSHKADEQKPLEPHCAAQDALLKVHDRIVEEDLYDGVTFD 150 Query: 180 NNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELVQ 359 ++NE ++TRLLVPN LVGCLLG++GDVIQ+LRSET A+IRVL A+ LP CAM TDELVQ Sbjct: 151 DDNENIVVTRLLVPNNLVGCLLGKRGDVIQRLRSETRANIRVLPADQLPTCAMDTDELVQ 210 Query: 360 ISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVHG 470 ISGKP + +KALYEVSTLLHQNPRKDKP L ++ G Sbjct: 211 ISGKPDVAKKALYEVSTLLHQNPRKDKPPLGLAIPFG 247 Score = 74.7 bits (182), Expect = 1e-11 Identities = 44/113 (38%), Positives = 64/113 (56%) Frame = +3 Query: 99 PHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLR 278 P +A+L++ N+ E +G I TRLLVP++ VGC+LG+ G VI ++R Sbjct: 370 PRSQTIEAILQLQNKASELSDKGT---------ITTRLLVPSSKVGCILGQGGQVINEMR 420 Query: 279 SETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 T A IRV S + P CA +ELVQISG A+ + AL E+++ L +D Sbjct: 421 RRTQADIRVYSKDDRPKCADEDEELVQISGNFAVAKDALAEITSRLRIRTLRD 473 >ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citrus clementina] gi|557532839|gb|ESR44022.1| hypothetical protein CICLE_v10011187mg [Citrus clementina] Length = 528 Score = 194 bits (494), Expect = 8e-48 Identities = 100/158 (63%), Positives = 125/158 (79%), Gaps = 2/158 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRG--VQD 176 +I S TK+A+ Q+ D ++ ET++E+ MEPHCAAQDALLKVH+RI+EEDL G D Sbjct: 95 IIYSSPTKIAKTQNKDDDSA-AETKKES--MEPHCAAQDALLKVHDRIIEEDLFGGMASD 151 Query: 177 ENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELV 356 ++N + RLLVPN +VGCLLG++GDVIQ+LRSETGA+IRVL A+ LP CAM+TDELV Sbjct: 152 DDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDELV 211 Query: 357 QISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVHG 470 QISGKP + ++ALYEVSTLLHQNPRKDKP SF +G Sbjct: 212 QISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYG 249 Score = 76.3 bits (186), Expect = 4e-12 Identities = 44/113 (38%), Positives = 63/113 (55%) Frame = +3 Query: 99 PHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLR 278 P DA+L++ N+ E +G I TRLLVP++ VGC+LG+ G VI ++R Sbjct: 375 PRSQTIDAILQLQNKTSEFSEKGT---------ITTRLLVPSSKVGCILGQGGHVINEMR 425 Query: 279 SETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 T A IRV S + P CA +ELVQISG + + AL E+++ L +D Sbjct: 426 RRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRD 478 >ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citrus clementina] gi|557532838|gb|ESR44021.1| hypothetical protein CICLE_v10011187mg [Citrus clementina] Length = 710 Score = 194 bits (494), Expect = 8e-48 Identities = 100/158 (63%), Positives = 125/158 (79%), Gaps = 2/158 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRG--VQD 176 +I S TK+A+ Q+ D ++ ET++E+ MEPHCAAQDALLKVH+RI+EEDL G D Sbjct: 95 IIYSSPTKIAKTQNKDDDSA-AETKKES--MEPHCAAQDALLKVHDRIIEEDLFGGMASD 151 Query: 177 ENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELV 356 ++N + RLLVPN +VGCLLG++GDVIQ+LRSETGA+IRVL A+ LP CAM+TDELV Sbjct: 152 DDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDELV 211 Query: 357 QISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVHG 470 QISGKP + ++ALYEVSTLLHQNPRKDKP SF +G Sbjct: 212 QISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYG 249 Score = 76.3 bits (186), Expect = 4e-12 Identities = 44/113 (38%), Positives = 63/113 (55%) Frame = +3 Query: 99 PHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLR 278 P DA+L++ N+ E +G I TRLLVP++ VGC+LG+ G VI ++R Sbjct: 375 PRSQTIDAILQLQNKTSEFSEKGT---------ITTRLLVPSSKVGCILGQGGHVINEMR 425 Query: 279 SETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 T A IRV S + P CA +ELVQISG + + AL E+++ L +D Sbjct: 426 RRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRD 478 >ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g18375 [Citrus sinensis] Length = 715 Score = 194 bits (493), Expect = 1e-47 Identities = 100/158 (63%), Positives = 125/158 (79%), Gaps = 2/158 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRG--VQD 176 +I S TK+A+K + D ++ ET++E+ MEPHCAAQDALLKVH+RI+EEDL G D Sbjct: 95 IIYSSPTKIAKKVNKDDDSA-AETKKES--MEPHCAAQDALLKVHDRIIEEDLFGGMASD 151 Query: 177 ENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELV 356 ++N + RLLVPN +VGCLLG++GDVIQ+LRSETGA+IRVL A+ LP CAM+TDELV Sbjct: 152 DDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDELV 211 Query: 357 QISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVHG 470 QISGKP + ++ALYEVSTLLHQNPRKDKP SF +G Sbjct: 212 QISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYG 249 Score = 76.3 bits (186), Expect = 4e-12 Identities = 44/113 (38%), Positives = 63/113 (55%) Frame = +3 Query: 99 PHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLR 278 P DA+L++ N+ E +G I TRLLVP++ VGC+LG+ G VI ++R Sbjct: 375 PRSQTIDAILQLQNKTSEFSEKGT---------ITTRLLVPSSKVGCILGQGGHVINEMR 425 Query: 279 SETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 T A IRV S + P CA +ELVQISG + + AL E+++ L +D Sbjct: 426 RRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRD 478 >gb|AEV43362.1| poly C-binding protein [Citrus sinensis] Length = 569 Score = 194 bits (493), Expect = 1e-47 Identities = 100/158 (63%), Positives = 125/158 (79%), Gaps = 2/158 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRG--VQD 176 +I S TK+A+ Q+ D ++ ET++E+ MEPHCAAQDALLKVH+RI+EEDL G D Sbjct: 95 IIYSSPTKIAKTQNKDDDSA-AETKKES--MEPHCAAQDALLKVHDRIIEEDLFGGMASD 151 Query: 177 ENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELV 356 ++N I RLLVPN +VGCLLG++GDVIQ+LRSETGA+IRVL A+ LP CAM+TDE+V Sbjct: 152 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 211 Query: 357 QISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVHG 470 QISGKP + ++ALYEVSTLLHQNPRKDKP SF +G Sbjct: 212 QISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYG 249 >gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [Prunus persica] Length = 576 Score = 188 bits (478), Expect = 6e-46 Identities = 102/157 (64%), Positives = 122/157 (77%), Gaps = 4/157 (2%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDV--MEPHCAAQDALLKVHNRIVEEDL-RGVQ 173 +I S TK++ KQ D ++ EEN++ M+PHCAAQDALLKVHNRIVEEDL GV Sbjct: 96 IIFSSPTKISSKQTNDGDSS-----EENELEPMDPHCAAQDALLKVHNRIVEEDLFGGVT 150 Query: 174 DENNNEIEIIT-RLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDE 350 +++NE ++T RLLVPN +VGCLLG+ GDVIQ+LRSET ASIRVL A+ LP CAM TDE Sbjct: 151 FDDDNENSVVTARLLVPNNMVGCLLGKGGDVIQRLRSETSASIRVLPADQLPTCAMETDE 210 Query: 351 LVQISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSM 461 LVQISGKP + ++ALYEVSTLLHQNPRKDKP F M Sbjct: 211 LVQISGKPDVTKRALYEVSTLLHQNPRKDKPPSGFPM 247 Score = 74.7 bits (182), Expect = 1e-11 Identities = 42/107 (39%), Positives = 63/107 (58%) Frame = +3 Query: 117 DALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGAS 296 +A+L++ N+ E +G+ I TRLLVP++ VGC+LG+ G VI ++R T A Sbjct: 381 EAILELQNKTSELSDKGI---------ITTRLLVPSSKVGCILGQGGQVINEMRRRTQAD 431 Query: 297 IRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 IRV S + P CA +ELVQISG + + AL E+++ L +D Sbjct: 432 IRVYSKDDRPRCAAEDEELVQISGNFGVAKDALAEITSRLRVRTLRD 478 >gb|EOY04206.1| RNA-binding KH domain-containing protein isoform 5 [Theobroma cacao] Length = 591 Score = 187 bits (476), Expect = 9e-46 Identities = 98/158 (62%), Positives = 120/158 (75%), Gaps = 3/158 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRG---VQ 173 + SSP + D D EN ++E VMEP CAAQDALLKVH++I E+DL G + Sbjct: 97 IYSSPMKVKTQNSDEDSRGENK--KDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALD 154 Query: 174 DENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDEL 353 D+N N + + RLLVPN +VGCLLG++GDVIQ+LRSETGASIR+L A+HLPACAM+TDEL Sbjct: 155 DDNGNTV-VTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATDEL 213 Query: 354 VQISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVH 467 VQISGK + ++ALYEVSTLLHQNPRKD P LSF + H Sbjct: 214 VQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPH 251 Score = 75.5 bits (184), Expect = 7e-12 Identities = 43/113 (38%), Positives = 63/113 (55%) Frame = +3 Query: 99 PHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLR 278 P DA+L++ N+ E +G + TRLLVP++ VGC+LG+ G VI ++R Sbjct: 373 PRSQTIDAILQLQNKTSEFSEKGT---------VTTRLLVPSSKVGCILGQGGHVINEMR 423 Query: 279 SETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 T A IRV S + P CA +ELVQISG + + AL E+++ L +D Sbjct: 424 RRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRD 476 >gb|EOY04205.1| RNA-binding KH domain-containing protein isoform 4 [Theobroma cacao] Length = 706 Score = 187 bits (476), Expect = 9e-46 Identities = 98/158 (62%), Positives = 120/158 (75%), Gaps = 3/158 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRG---VQ 173 + SSP + D D EN ++E VMEP CAAQDALLKVH++I E+DL G + Sbjct: 97 IYSSPMKVKTQNSDEDSRGENK--KDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALD 154 Query: 174 DENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDEL 353 D+N N + + RLLVPN +VGCLLG++GDVIQ+LRSETGASIR+L A+HLPACAM+TDEL Sbjct: 155 DDNGNTV-VTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATDEL 213 Query: 354 VQISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVH 467 VQISGK + ++ALYEVSTLLHQNPRKD P LSF + H Sbjct: 214 VQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPH 251 Score = 75.5 bits (184), Expect = 7e-12 Identities = 43/113 (38%), Positives = 63/113 (55%) Frame = +3 Query: 99 PHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLR 278 P DA+L++ N+ E +G + TRLLVP++ VGC+LG+ G VI ++R Sbjct: 373 PRSQTIDAILQLQNKTSEFSEKGT---------VTTRLLVPSSKVGCILGQGGHVINEMR 423 Query: 279 SETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 T A IRV S + P CA +ELVQISG + + AL E+++ L +D Sbjct: 424 RRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRD 476 >gb|EOY04203.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma cacao] Length = 580 Score = 187 bits (476), Expect = 9e-46 Identities = 98/158 (62%), Positives = 120/158 (75%), Gaps = 3/158 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRG---VQ 173 + SSP + D D EN ++E VMEP CAAQDALLKVH++I E+DL G + Sbjct: 97 IYSSPMKVKTQNSDEDSRGENK--KDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALD 154 Query: 174 DENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDEL 353 D+N N + + RLLVPN +VGCLLG++GDVIQ+LRSETGASIR+L A+HLPACAM+TDEL Sbjct: 155 DDNGNTV-VTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATDEL 213 Query: 354 VQISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVH 467 VQISGK + ++ALYEVSTLLHQNPRKD P LSF + H Sbjct: 214 VQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPH 251 Score = 75.5 bits (184), Expect = 7e-12 Identities = 43/113 (38%), Positives = 63/113 (55%) Frame = +3 Query: 99 PHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLR 278 P DA+L++ N+ E +G + TRLLVP++ VGC+LG+ G VI ++R Sbjct: 373 PRSQTIDAILQLQNKTSEFSEKGT---------VTTRLLVPSSKVGCILGQGGHVINEMR 423 Query: 279 SETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 T A IRV S + P CA +ELVQISG + + AL E+++ L +D Sbjct: 424 RRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRD 476 >gb|EOY04202.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma cacao] gi|508712307|gb|EOY04204.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma cacao] Length = 706 Score = 187 bits (476), Expect = 9e-46 Identities = 98/158 (62%), Positives = 120/158 (75%), Gaps = 3/158 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRG---VQ 173 + SSP + D D EN ++E VMEP CAAQDALLKVH++I E+DL G + Sbjct: 97 IYSSPMKVKTQNSDEDSRGENK--KDEVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALD 154 Query: 174 DENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDEL 353 D+N N + + RLLVPN +VGCLLG++GDVIQ+LRSETGASIR+L A+HLPACAM+TDEL Sbjct: 155 DDNGNTV-VTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATDEL 213 Query: 354 VQISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVH 467 VQISGK + ++ALYEVSTLLHQNPRKD P LSF + H Sbjct: 214 VQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPH 251 Score = 75.5 bits (184), Expect = 7e-12 Identities = 43/113 (38%), Positives = 63/113 (55%) Frame = +3 Query: 99 PHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLR 278 P DA+L++ N+ E +G + TRLLVP++ VGC+LG+ G VI ++R Sbjct: 373 PRSQTIDAILQLQNKTSEFSEKGT---------VTTRLLVPSSKVGCILGQGGHVINEMR 423 Query: 279 SETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 T A IRV S + P CA +ELVQISG + + AL E+++ L +D Sbjct: 424 RRTQADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRD 476 >ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis] gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis] Length = 537 Score = 187 bits (475), Expect = 1e-45 Identities = 96/149 (64%), Positives = 117/149 (78%), Gaps = 2/149 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRG--VQD 176 +I S K++R + ++E+ E D+MEP+CAAQDALLKVH+RIVEEDL G D Sbjct: 93 IIYSSPEKISRNHN---DHEDLTMENEQDIMEPYCAAQDALLKVHDRIVEEDLFGGMTSD 149 Query: 177 ENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELV 356 ++N + RLLVPN +VGCLLG++GDVIQ+LRSETGA+IRVL A+HLP CAMSTDELV Sbjct: 150 DDNENGFVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELV 209 Query: 357 QISGKPALVRKALYEVSTLLHQNPRKDKP 443 QIS KP + +KALYEVSTLLHQNPRKDKP Sbjct: 210 QISAKPDVAKKALYEVSTLLHQNPRKDKP 238 Score = 79.3 bits (194), Expect = 5e-13 Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 3/137 (2%) Frame = +3 Query: 36 KQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRGVQDENNNEIE---IIT 206 +QDT + + E+D +A +AL ++ ++ L+ +Q++ ++ E I T Sbjct: 339 QQDTGASIHVEDASAESDERVIRVSASEALWNPRSQTIDAILQ-LQNKTSDFSEKGTITT 397 Query: 207 RLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELVQISGKPALVR 386 RLLVP++ VGC+LG+ G VI ++R T A IRV S + P CA +ELVQISGK + + Sbjct: 398 RLLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDEELVQISGKFGVAK 457 Query: 387 KALYEVSTLLHQNPRKD 437 AL E+++ L +D Sbjct: 458 DALAEIASRLRVRTLRD 474 >ref|XP_004306018.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria vesca subsp. vesca] Length = 344 Score = 185 bits (469), Expect = 6e-45 Identities = 96/157 (61%), Positives = 124/157 (78%), Gaps = 1/157 (0%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDL-RGVQDE 179 +I SP TK++RKQ++D E+ +E +EPHCAAQDALLKVH+RIVEEDL GV + Sbjct: 64 IIFSPPTKISRKQNSD---EDSHKADEQKPLEPHCAAQDALLKVHDRIVEEDLYNGVTFD 120 Query: 180 NNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELVQ 359 ++NE ++TRLLVPN LVGCLLG++G+VI++LRSET A+IRVL A+ LP CA+ TDEL Sbjct: 121 DDNENIVVTRLLVPNNLVGCLLGKRGEVIKRLRSETRANIRVLHADQLPTCALDTDEL-- 178 Query: 360 ISGKPALVRKALYEVSTLLHQNPRKDKPTLSFSMVHG 470 ISGKP + ++ALYEVSTLLH+NPRKDKP L ++ G Sbjct: 179 ISGKPDVAKRALYEVSTLLHKNPRKDKPPLGLAIPFG 215 >ref|XP_002329331.1| predicted protein [Populus trichocarpa] gi|566171617|ref|XP_006383459.1| hypothetical protein POPTR_0005s15690g [Populus trichocarpa] gi|550339070|gb|ERP61256.1| hypothetical protein POPTR_0005s15690g [Populus trichocarpa] Length = 563 Score = 184 bits (468), Expect = 8e-45 Identities = 94/148 (63%), Positives = 115/148 (77%), Gaps = 2/148 (1%) Frame = +3 Query: 3 LISSPSTKLARKQDTDKNNENPETREENDVMEPHCAAQDALLKVHNRIVEEDLRG--VQD 176 +I S S K RK D D+ P + + EPHCAAQDALLKVH+RIVEEDL G D Sbjct: 92 IIYSSSDKPPRKMDGDEGL--PAGNGQQEAFEPHCAAQDALLKVHDRIVEEDLFGGMASD 149 Query: 177 ENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELV 356 ++N+ + RLLVPN +VGC+LG++GDVIQ+LRSETGA+IRVL A+HLP+CAM TDELV Sbjct: 150 DDNDNNVVTARLLVPNNMVGCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELV 209 Query: 357 QISGKPALVRKALYEVSTLLHQNPRKDK 440 QISGKPA+ ++ALYE+S LLHQNPRKDK Sbjct: 210 QISGKPAVAKRALYEISILLHQNPRKDK 237 Score = 71.2 bits (173), Expect = 1e-10 Identities = 41/113 (36%), Positives = 62/113 (54%) Frame = +3 Query: 99 PHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKLR 278 P DA+L++ ++ + +G+ IITRLLVP++ VGC+LG+ G VI ++R Sbjct: 369 PRSQTIDAILQLQDKTSDFSEKGM---------IITRLLVPSSKVGCILGQGGQVINEMR 419 Query: 279 SETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 A IRV P CA +ELVQISG + + AL E+++ L +D Sbjct: 420 RRLQADIRVYPKNDKPKCASDDEELVQISGNYGVAKDALAEIASRLRARTLRD 472 >ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g18375-like [Oryza brachyantha] Length = 773 Score = 150 bits (379), Expect = 2e-34 Identities = 76/122 (62%), Positives = 94/122 (77%), Gaps = 3/122 (2%) Frame = +3 Query: 93 MEPHCAAQDALLKVHNRIVE-EDLRGVQDENNNEIE--IITRLLVPNTLVGCLLGRKGDV 263 M+PHC AQDALLK+H++I E EDL G D +E + R+LVP VGCLLG+ G + Sbjct: 119 MKPHCFAQDALLKIHDKIAEDEDLHGGIDHEKSETVDGVTARILVPGNQVGCLLGKGGSI 178 Query: 264 IQKLRSETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKDKP 443 IQ+LR+ETGA IRVL +E+LP CA+ +DELVQISG P+LVRKALYE+ST LHQ+PRKD P Sbjct: 179 IQQLRNETGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKDNP 238 Query: 444 TL 449 L Sbjct: 239 PL 240 Score = 69.7 bits (169), Expect = 4e-10 Identities = 41/114 (35%), Positives = 63/114 (55%) Frame = +3 Query: 96 EPHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKL 275 +P +AL+ +H+++ EN + + TRL+VP+ VGC+LG G VI ++ Sbjct: 355 DPVSPTIEALILLHSKV------SAPAENRH---LTTRLVVPSNKVGCILGEGGKVITEM 405 Query: 276 RSETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 R TGA IRV S P +ELVQ++G PA+ R AL E+++ L +D Sbjct: 406 RRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRD 459 >gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica Group] Length = 677 Score = 148 bits (374), Expect = 6e-34 Identities = 77/138 (55%), Positives = 103/138 (74%), Gaps = 3/138 (2%) Frame = +3 Query: 45 TDKNNENPETREENDVMEPHCAAQDALLKVHNRIV-EEDLRG--VQDENNNEIEIITRLL 215 T++ +N T D M+PHC AQDALLK+H++I +EDL V +++ N ++I R+L Sbjct: 102 TEEAAQNISTDGFED-MKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARIL 160 Query: 216 VPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKAL 395 VP VGCLLG+ G +IQ+LR++TGA IRVL +E+LP CA+ +DELVQISG +LVRKAL Sbjct: 161 VPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKAL 220 Query: 396 YEVSTLLHQNPRKDKPTL 449 YE+ST LHQ+PRKD P L Sbjct: 221 YEISTRLHQHPRKDNPPL 238 Score = 68.9 bits (167), Expect = 6e-10 Identities = 40/114 (35%), Positives = 64/114 (56%) Frame = +3 Query: 96 EPHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKL 275 +P +AL+ +H+++ EN++ + TRL+VP+ VGC++G G VI ++ Sbjct: 353 DPVSPTIEALILLHSKV------STLAENHH---LTTRLVVPSNKVGCIIGEGGKVITEM 403 Query: 276 RSETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 R TGA IRV S P +ELVQ++G PA+ R AL E+++ L +D Sbjct: 404 RRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRD 457 >ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group] gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica Group] gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group] gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group] Length = 762 Score = 148 bits (374), Expect = 6e-34 Identities = 77/138 (55%), Positives = 103/138 (74%), Gaps = 3/138 (2%) Frame = +3 Query: 45 TDKNNENPETREENDVMEPHCAAQDALLKVHNRIV-EEDLRG--VQDENNNEIEIITRLL 215 T++ +N T D M+PHC AQDALLK+H++I +EDL V +++ N ++I R+L Sbjct: 102 TEEAAQNISTDGFED-MKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARIL 160 Query: 216 VPNTLVGCLLGRKGDVIQKLRSETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKAL 395 VP VGCLLG+ G +IQ+LR++TGA IRVL +E+LP CA+ +DELVQISG +LVRKAL Sbjct: 161 VPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKAL 220 Query: 396 YEVSTLLHQNPRKDKPTL 449 YE+ST LHQ+PRKD P L Sbjct: 221 YEISTRLHQHPRKDNPPL 238 Score = 68.9 bits (167), Expect = 6e-10 Identities = 40/114 (35%), Positives = 64/114 (56%) Frame = +3 Query: 96 EPHCAAQDALLKVHNRIVEEDLRGVQDENNNEIEIITRLLVPNTLVGCLLGRKGDVIQKL 275 +P +AL+ +H+++ EN++ + TRL+VP+ VGC++G G VI ++ Sbjct: 353 DPVSPTIEALILLHSKV------STLAENHH---LTTRLVVPSNKVGCIIGEGGKVITEM 403 Query: 276 RSETGASIRVLSAEHLPACAMSTDELVQISGKPALVRKALYEVSTLLHQNPRKD 437 R TGA IRV S P +ELVQ++G PA+ R AL E+++ L +D Sbjct: 404 RRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRD 457