BLASTX nr result
ID: Atropa21_contig00024119
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00024119
(452 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264... 159 5e-37
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts... 156 2e-36
gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, pa... 143 3e-32
gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th... 143 3e-32
ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts... 134 9e-30
ref|XP_002264276.2| PREDICTED: regulator of nonsense transcripts... 134 2e-29
emb|CBI29694.3| unnamed protein product [Vitis vinifera] 134 2e-29
gb|EPS57826.1| hypothetical protein M569_16991, partial [Genlise... 133 2e-29
gb|ESW20566.1| hypothetical protein PHAVU_006G219800g [Phaseolus... 132 4e-29
ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts... 132 6e-29
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm... 132 6e-29
gb|EOY26875.1| Smg-4/UPF3 family protein, putative isoform 6 [Th... 131 8e-29
gb|EOY26874.1| Smg-4/UPF3 family protein, putative isoform 5 [Th... 131 8e-29
gb|EOY26871.1| Smg-4/UPF3 family protein, putative isoform 2 [Th... 131 8e-29
gb|EOY26870.1| Smg-4/UPF3 family protein, putative isoform 1 [Th... 131 8e-29
ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts... 131 1e-28
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts... 131 1e-28
ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263... 131 1e-28
gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 130 2e-28
gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 130 2e-28
>ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum
lycopersicum]
Length = 485
Score = 159 bits (401), Expect = 5e-37
Identities = 73/82 (89%), Positives = 78/82 (95%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MKGPLDRSKVVLRHLPPTIS+SML++QVDSRF GRYNWF FLP KSSQKHQ YSRAYI+F
Sbjct: 1 MKGPLDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRPEDVIEFAEFFDGH+FVNEK
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEK 82
>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
tuberosum]
Length = 483
Score = 156 bits (395), Expect = 2e-36
Identities = 72/82 (87%), Positives = 77/82 (93%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MKGPLDRSKVVLRHLPPTIS+SML++QVDSRF GRYNWF FLP KSSQKHQ YSRAYI+F
Sbjct: 1 MKGPLDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
K PEDVIEFAEFFDGH+FVNEK
Sbjct: 61 KMPEDVIEFAEFFDGHVFVNEK 82
>gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma
cacao]
Length = 440
Score = 143 bits (360), Expect = 3e-32
Identities = 64/82 (78%), Positives = 75/82 (91%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MKG LDR+KV+LRHLPP I+E+ML+EQVD+ F+GRYNW SF P KSSQKHQ+YSRAYIDF
Sbjct: 1 MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KR EDV+EFAEFF+GH+FVNEK
Sbjct: 61 KRSEDVLEFAEFFNGHVFVNEK 82
>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
Length = 514
Score = 143 bits (360), Expect = 3e-32
Identities = 64/82 (78%), Positives = 75/82 (91%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MKG LDR+KV+LRHLPP I+E+ML+EQVD+ F+GRYNW SF P KSSQKHQ+YSRAYIDF
Sbjct: 1 MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KR EDV+EFAEFF+GH+FVNEK
Sbjct: 61 KRSEDVLEFAEFFNGHVFVNEK 82
>ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Glycine max] gi|571524272|ref|XP_006598795.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X2 [Glycine max]
Length = 512
Score = 134 bits (338), Expect = 9e-30
Identities = 62/82 (75%), Positives = 71/82 (86%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MKG LDR+KVVLRHLPP+ISE+ L+ Q+D+ F GRYNW SF P K SQKH +YSRAYIDF
Sbjct: 1 MKGALDRTKVVLRHLPPSISEAALLAQIDAAFAGRYNWLSFRPGKISQKHISYSRAYIDF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRPEDVI FAEFF+GH+FVNEK
Sbjct: 61 KRPEDVILFAEFFNGHVFVNEK 82
>ref|XP_002264276.2| PREDICTED: regulator of nonsense transcripts 3B-like [Vitis
vinifera]
Length = 256
Score = 134 bits (336), Expect = 2e-29
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MKGPLDR+KVV+RHLPPTISE+ +EQ+D+ F GRY F P K+SQK Q+YSRAY+DF
Sbjct: 1 MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRPEDVIEFAEFFDGH+FVNEK
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEK 82
>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 134 bits (336), Expect = 2e-29
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MKGPLDR+KVV+RHLPPTISE+ +EQ+D+ F GRY F P K+SQK Q+YSRAY+DF
Sbjct: 1 MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRPEDVIEFAEFFDGH+FVNEK
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEK 82
>gb|EPS57826.1| hypothetical protein M569_16991, partial [Genlisea aurea]
Length = 484
Score = 133 bits (335), Expect = 2e-29
Identities = 62/82 (75%), Positives = 71/82 (86%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MKGPLDR+KVVLRHLPP+ISES L+E +DSRF+GRY+WF+F P KSSQK YSRAYI F
Sbjct: 1 MKGPLDRTKVVLRHLPPSISESNLVELIDSRFSGRYHWFAFCPGKSSQKRLKYSRAYIGF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
+PEDVIEFA FF+GH FVNEK
Sbjct: 61 YKPEDVIEFAAFFNGHAFVNEK 82
>gb|ESW20566.1| hypothetical protein PHAVU_006G219800g [Phaseolus vulgaris]
gi|561021796|gb|ESW20567.1| hypothetical protein
PHAVU_006G219800g [Phaseolus vulgaris]
Length = 513
Score = 132 bits (333), Expect = 4e-29
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MKG LDR+KVVLRHLPP++SE+ L+ Q+DS F RYNW SF PAK SQKH +YSRAYIDF
Sbjct: 1 MKGSLDRTKVVLRHLPPSLSEAALLAQIDSAFADRYNWLSFRPAKVSQKHISYSRAYIDF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRP+DVI FAEFF+GH+FVNEK
Sbjct: 61 KRPDDVILFAEFFNGHVFVNEK 82
>ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Glycine max] gi|571493781|ref|XP_006592655.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X2 [Glycine max]
Length = 514
Score = 132 bits (331), Expect = 6e-29
Identities = 60/82 (73%), Positives = 70/82 (85%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MKG LDR+KVVLRHLPP+ISE+ L+ Q+D+ F GRYNW SF P K SQKH ++SRAYIDF
Sbjct: 1 MKGALDRTKVVLRHLPPSISEAALLSQIDAAFAGRYNWLSFRPGKISQKHMSFSRAYIDF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRPEDVI FAEFF+GH+FVN K
Sbjct: 61 KRPEDVILFAEFFNGHVFVNVK 82
>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
gi|223534215|gb|EEF35930.1| conserved hypothetical
protein [Ricinus communis]
Length = 472
Score = 132 bits (331), Expect = 6e-29
Identities = 59/80 (73%), Positives = 70/80 (87%)
Frame = +2
Query: 212 GPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDFKR 391
G +++KVV+RHLPPTIS+ +EQ+D F+GRYNW SF P KSSQKHQ+YSRAYIDFKR
Sbjct: 4 GQAEKTKVVVRHLPPTISQGSFLEQIDVVFSGRYNWVSFRPGKSSQKHQSYSRAYIDFKR 63
Query: 392 PEDVIEFAEFFDGHIFVNEK 451
PEDVIEFAEFF+GH+FVNEK
Sbjct: 64 PEDVIEFAEFFNGHLFVNEK 83
>gb|EOY26875.1| Smg-4/UPF3 family protein, putative isoform 6 [Theobroma cacao]
Length = 450
Score = 131 bits (330), Expect = 8e-29
Identities = 59/82 (71%), Positives = 69/82 (84%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MK PL R+KVV+RHLPP++++S L Q+D RF+ RYNWFSF KSS KHQ YSRAYI+F
Sbjct: 1 MKEPLRRTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYINF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRPEDV EFAEFFDGH+FVNEK
Sbjct: 61 KRPEDVFEFAEFFDGHVFVNEK 82
>gb|EOY26874.1| Smg-4/UPF3 family protein, putative isoform 5 [Theobroma cacao]
Length = 492
Score = 131 bits (330), Expect = 8e-29
Identities = 59/82 (71%), Positives = 69/82 (84%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MK PL R+KVV+RHLPP++++S L Q+D RF+ RYNWFSF KSS KHQ YSRAYI+F
Sbjct: 1 MKEPLRRTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYINF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRPEDV EFAEFFDGH+FVNEK
Sbjct: 61 KRPEDVFEFAEFFDGHVFVNEK 82
>gb|EOY26871.1| Smg-4/UPF3 family protein, putative isoform 2 [Theobroma cacao]
Length = 487
Score = 131 bits (330), Expect = 8e-29
Identities = 59/82 (71%), Positives = 69/82 (84%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MK PL R+KVV+RHLPP++++S L Q+D RF+ RYNWFSF KSS KHQ YSRAYI+F
Sbjct: 1 MKEPLRRTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYINF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRPEDV EFAEFFDGH+FVNEK
Sbjct: 61 KRPEDVFEFAEFFDGHVFVNEK 82
>gb|EOY26870.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
gi|508779616|gb|EOY26872.1| Smg-4/UPF3 family protein,
putative isoform 1 [Theobroma cacao]
gi|508779617|gb|EOY26873.1| Smg-4/UPF3 family protein,
putative isoform 1 [Theobroma cacao]
Length = 523
Score = 131 bits (330), Expect = 8e-29
Identities = 59/82 (71%), Positives = 69/82 (84%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
MK PL R+KVV+RHLPP++++S L Q+D RF+ RYNWFSF KSS KHQ YSRAYI+F
Sbjct: 1 MKEPLRRTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYINF 60
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRPEDV EFAEFFDGH+FVNEK
Sbjct: 61 KRPEDVFEFAEFFDGHVFVNEK 82
>ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
[Solanum tuberosum]
Length = 482
Score = 131 bits (329), Expect = 1e-28
Identities = 59/76 (77%), Positives = 69/76 (90%)
Frame = +2
Query: 224 RSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDFKRPEDV 403
R+KVVLRHLPPT+S+SML+E VDSRF GRYNWF+F PAK+S KHQ+YS+AYIDF+ EDV
Sbjct: 5 RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDV 64
Query: 404 IEFAEFFDGHIFVNEK 451
EFAEFFDGH+FVNEK
Sbjct: 65 TEFAEFFDGHMFVNEK 80
>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X2 [Solanum tuberosum]
gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X3 [Solanum
tuberosum]
Length = 508
Score = 131 bits (329), Expect = 1e-28
Identities = 59/76 (77%), Positives = 69/76 (90%)
Frame = +2
Query: 224 RSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDFKRPEDV 403
R+KVVLRHLPPT+S+SML+E VDSRF GRYNWF+F PAK+S KHQ+YS+AYIDF+ EDV
Sbjct: 5 RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDV 64
Query: 404 IEFAEFFDGHIFVNEK 451
EFAEFFDGH+FVNEK
Sbjct: 65 TEFAEFFDGHMFVNEK 80
>ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263168 [Solanum
lycopersicum]
Length = 438
Score = 131 bits (329), Expect = 1e-28
Identities = 59/76 (77%), Positives = 69/76 (90%)
Frame = +2
Query: 224 RSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDFKRPEDV 403
R+KVVLRHLPPT+S+SML+E VDSRF GRYNWF+F PAK+S KHQ+YS+AYIDF+ EDV
Sbjct: 5 RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFNFRPAKTSLKHQSYSKAYIDFRNMEDV 64
Query: 404 IEFAEFFDGHIFVNEK 451
EFAEFFDGH+FVNEK
Sbjct: 65 TEFAEFFDGHMFVNEK 80
>gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
Length = 485
Score = 130 bits (326), Expect = 2e-28
Identities = 59/82 (71%), Positives = 71/82 (86%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
+K LDR+KVVLRHLPP+IS++ L+EQ+D F+GRYNW +F P K SQK+ +YSRAYID
Sbjct: 2 LKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDL 61
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRPEDVIEFAEFFDGH+FVNEK
Sbjct: 62 KRPEDVIEFAEFFDGHLFVNEK 83
>gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
Length = 482
Score = 130 bits (326), Expect = 2e-28
Identities = 59/82 (71%), Positives = 71/82 (86%)
Frame = +2
Query: 206 MKGPLDRSKVVLRHLPPTISESMLIEQVDSRFTGRYNWFSFLPAKSSQKHQAYSRAYIDF 385
+K LDR+KVVLRHLPP+IS++ L+EQ+D F+GRYNW +F P K SQK+ +YSRAYID
Sbjct: 2 LKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDL 61
Query: 386 KRPEDVIEFAEFFDGHIFVNEK 451
KRPEDVIEFAEFFDGH+FVNEK
Sbjct: 62 KRPEDVIEFAEFFDGHLFVNEK 83