BLASTX nr result

ID: Atropa21_contig00024070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00024070
         (530 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352273.1| PREDICTED: rRNA-processing protein UTP23 hom...   140   2e-31
ref|XP_004244615.1| PREDICTED: rRNA-processing protein UTP23 hom...   120   2e-25
ref|XP_006339285.1| PREDICTED: rRNA-processing protein UTP23 hom...   110   2e-22
ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 hom...    66   4e-09
ref|XP_004249533.1| PREDICTED: uncharacterized protein LOC101261...    62   8e-08
ref|XP_006384756.1| hypothetical protein POPTR_0004s20810g [Popu...    59   9e-07
gb|EPS72859.1| hypothetical protein M569_01899, partial [Genlise...    59   9e-07

>ref|XP_006352273.1| PREDICTED: rRNA-processing protein UTP23 homolog [Solanum
           tuberosum]
          Length = 284

 Score =  140 bits (353), Expect = 2e-31
 Identities = 85/128 (66%), Positives = 92/128 (71%), Gaps = 5/128 (3%)
 Frame = -1

Query: 530 FAQSAEEERLHMTDLEYNMLSLTKKRKLSDDKEGDSSDAQEE-VDDVSHV--INTNVKRN 360
           FA+S+EEERLHMTDLEYNML   KKR+LSDDK+GDSSDA EE +DDVS V  INTNVKRN
Sbjct: 157 FAKSSEEERLHMTDLEYNMLRQNKKRRLSDDKQGDSSDASEEKIDDVSQVQIINTNVKRN 216

Query: 359 GSXXXXXXXXXXXXXKGPNPLSV-KKKKKSADTNGTTSGKESKHAEGTV-XXXXXXXXXR 186
           GS             KGPNPLSV KKKKKS DTN TTSGKE+K+ EGTV          R
Sbjct: 217 GSDVKDKVRFKRKKAKGPNPLSVKKKKKKSGDTNFTTSGKENKNGEGTVRSRKRSRKRSR 276

Query: 185 TNVVEGNA 162
            NVVEGNA
Sbjct: 277 KNVVEGNA 284


>ref|XP_004244615.1| PREDICTED: rRNA-processing protein UTP23 homolog [Solanum
           lycopersicum]
          Length = 283

 Score =  120 bits (300), Expect = 2e-25
 Identities = 75/127 (59%), Positives = 84/127 (66%), Gaps = 4/127 (3%)
 Frame = -1

Query: 530 FAQSAEEERLHMTDLEYNMLSLTKKRKLSDDKEGDSSDAQE-EVDDVS--HVINTNVKRN 360
           FA+SAEE+RLHMTDLEYNML   KKRKLSD K+GDSS+A E E DDVS   +INTN++RN
Sbjct: 157 FAKSAEEKRLHMTDLEYNMLRQGKKRKLSDVKQGDSSNASEGETDDVSQAQIINTNLQRN 216

Query: 359 GSXXXXXXXXXXXXXKGPNPLSVKKKKKSADTNGTTSGKESKHAEGTV-XXXXXXXXXRT 183
           GS             KGPNPLSVKKKKK      TT GKE+K+ EGTV          R 
Sbjct: 217 GSDVKDKVRFKRKKAKGPNPLSVKKKKKKPVDTITTLGKENKNGEGTVRSRKRSRKRSRK 276

Query: 182 NVVEGNA 162
           NVV GNA
Sbjct: 277 NVVVGNA 283


>ref|XP_006339285.1| PREDICTED: rRNA-processing protein UTP23 homolog [Solanum
           tuberosum]
          Length = 280

 Score =  110 bits (275), Expect = 2e-22
 Identities = 74/128 (57%), Positives = 83/128 (64%), Gaps = 7/128 (5%)
 Frame = -1

Query: 530 FAQSAEEERLHMTDLEYNMLSLTKKRKLSDDKEGDSSDAQEE-VDDVS--HVINTNVKRN 360
           FA+S+EEERLHMTDLEYNML   KKR+LSDDK+GDSS A EE + DVS   +INTNVKRN
Sbjct: 154 FAKSSEEERLHMTDLEYNMLRQMKKRRLSDDKQGDSSVASEEKIIDVSQAQIINTNVKRN 213

Query: 359 GSXXXXXXXXXXXXXKGPNPLSV-KKKKKSADTNGTTSGKESKHAEGTVXXXXXXXXXRT 183
           GS             KGPNPLSV KKKKKSADTN     K+    EGTV         +T
Sbjct: 214 GSDVKDKVRFKRKKAKGPNPLSVLKKKKKSADTN----EKKVNTDEGTVKRKRKRKRRKT 269

Query: 182 ---NVVEG 168
              +VVEG
Sbjct: 270 SHKDVVEG 277


>ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 homolog [Vitis vinifera]
           gi|296082256|emb|CBI21261.3| unnamed protein product
           [Vitis vinifera]
          Length = 284

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
 Frame = -1

Query: 530 FAQSAEEERLHMTDLEYNMLSLTKKRKLSDDKEGDSSDAQEEVDD----VSHVINTNVKR 363
           F +S+EEERLHMT+LE+ +LS  +K +L+  +  DSSD  E ++D    +    N N  +
Sbjct: 157 FVKSSEEERLHMTELEHKLLSKRQKNRLTSKETKDSSDENEALEDQNLGLQAATNENNAK 216

Query: 362 NGSXXXXXXXXXXXXXKGPNPLSVKKKKKSADTNGTTSGKESKHAEGTV 216
                           KGPNPLS KKKK     N   S KE K A  TV
Sbjct: 217 RRMVVKDRVQFKRNKAKGPNPLSCKKKKSQRQPN-PASEKEDKDAGKTV 264


>ref|XP_004249533.1| PREDICTED: uncharacterized protein LOC101261561 [Solanum
           lycopersicum]
          Length = 228

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = -1

Query: 467 LTKKRKLSDDKEGDSSDAQEE-VDDVSH--VINTNVKRNGSXXXXXXXXXXXXXKGPNPL 297
           + K R+LSDDK+G+SS A EE + DVS   +I  NVKRNGS             KGPNPL
Sbjct: 7   IMKNRRLSDDKQGNSSVASEEKIHDVSQAQIIKKNVKRNGSDVKDKVCFKRKKAKGPNPL 66

Query: 296 SVKKKKKSADTNGTTSGKESKHAEGTV 216
           SV KKKK       T+ K+  + EG+V
Sbjct: 67  SVLKKKKKP---VVTNDKKLNNGEGSV 90


>ref|XP_006384756.1| hypothetical protein POPTR_0004s20810g [Populus trichocarpa]
           gi|550341524|gb|ERP62553.1| hypothetical protein
           POPTR_0004s20810g [Populus trichocarpa]
          Length = 283

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
 Frame = -1

Query: 530 FAQSAEEERLHMTDLEYNMLSLTKKRKLSDDKEGDSSDAQEEVDDVSHVINTN--VKRNG 357
           FA+++EEER HMT+ E  +L    K  + + + GDSSD     +D +  +       R G
Sbjct: 157 FAKNSEEERSHMTEKEVALLKKRTKDLVENWEIGDSSDENGGPEDENLEMQPQKYSSRKG 216

Query: 356 SXXXXXXXXXXXXXKGPNPLSVKKKKKSADTNGTTSGKESKHAEGTV 216
                         KGPNPLSV+KKK   +TN + SGKESK  + TV
Sbjct: 217 MKVKDRPQFKRNKAKGPNPLSVQKKKSRQNTN-SMSGKESKGGDETV 262


>gb|EPS72859.1| hypothetical protein M569_01899, partial [Genlisea aurea]
          Length = 231

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/83 (48%), Positives = 47/83 (56%)
 Frame = -1

Query: 527 AQSAEEERLHMTDLEYNMLSLTKKRKLSDDKEGDSSDAQEEVDDVSHVINTNVKRNGSXX 348
           A+ AEE R HMTDLEY ML L+KKR +S D + DSS A E+ + VS        R+G   
Sbjct: 158 AKKAEEGRSHMTDLEYKMLKLSKKRVVSPDAK-DSSLAVEDDETVS--------RSGIDT 208

Query: 347 XXXXXXXXXXXKGPNPLSVKKKK 279
                      KGPNPLS KKKK
Sbjct: 209 KDKVKFKRKRAKGPNPLSCKKKK 231


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