BLASTX nr result

ID: Atropa21_contig00023420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00023420
         (753 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343731.1| PREDICTED: reticulon-like protein B21-like [...   145   1e-32
ref|XP_004242584.1| PREDICTED: uncharacterized protein LOC101265...   116   9e-24
ref|XP_004251753.1| PREDICTED: reticulon-like protein B21-like [...    63   1e-07
ref|XP_006350096.1| PREDICTED: reticulon-like protein B21-like [...    58   4e-06

>ref|XP_006343731.1| PREDICTED: reticulon-like protein B21-like [Solanum tuberosum]
          Length = 746

 Score =  145 bits (367), Expect = 1e-32
 Identities = 107/250 (42%), Positives = 128/250 (51%), Gaps = 2/250 (0%)
 Frame = +2

Query: 8   ENEDGNERNIGLREVKYVNLNGDLRDSLQMVKTKSEKCKTFEENKVVVAAAVLDDESKKK 187
           +N DG  +N  LR+VK + LNG+L++SLQMVKTK+EKC     NK               
Sbjct: 333 QNVDG--KNCDLRKVKSMCLNGNLKNSLQMVKTKTEKC-----NK--------------- 370

Query: 188 NLEGSFEENKVVADDVLDDESKRDLEGSXXXXXXXXXXXXXKVITRSNVECQVKSPLTXX 367
               SFE+NKV+ ++  +                       KVI RSNVE Q K  L   
Sbjct: 371 ----SFEKNKVLEENCEE-----------------------KVI-RSNVEPQEKLNLENE 402

Query: 368 XXXXXXXXXXXXXXXXXXXXXXXXXXXINVAKQIIKPKKTLIEENNKVHIGNNEKKTVXX 547
                                       N   ++IK KK +I E  KVHI NNEKK V  
Sbjct: 403 DFKILEEEIEKE----------------NSLAKVIKTKKIVIVEEKKVHISNNEKKQVSI 446

Query: 548 XXXXXXXXXXXX-GQSRI-HHHPSPTRTKPVPSSNEFQTNIPRQHSNLQSLVDLVMWREA 721
                        GQSRI HHHPSPTRTKPVP+S+EFQ NIPRQHSNL+SLVDLVMW +A
Sbjct: 447 SPIIKKQSNLSFSGQSRILHHHPSPTRTKPVPASDEFQRNIPRQHSNLESLVDLVMWTDA 506

Query: 722 SKSTLVFGIG 751
           SKS L+FGIG
Sbjct: 507 SKSALIFGIG 516



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 50/93 (53%), Positives = 64/93 (68%), Gaps = 7/93 (7%)
 Frame = +2

Query: 8   ENEDGNERNIGLREVKYVNLNGDLRDSLQMVKTKSEKCK---TFEENKVVVAAAVLDDES 178
           +  +GNE+   L++VK V+ NG+LR+SLQ++K KSEKCK     EENKVV    VLD+  
Sbjct: 123 KKREGNEKMCELKKVKNVSPNGNLRNSLQLMKAKSEKCKEIDVIEENKVV---GVLDE-- 177

Query: 179 KKKNLEGSF----EENKVVADDVLDDESKRDLE 265
            KKNLE  F    +ENKVV  DVL DESK++LE
Sbjct: 178 SKKNLERVFSESSDENKVV--DVL-DESKKNLE 207


>ref|XP_004242584.1| PREDICTED: uncharacterized protein LOC101265346 [Solanum
           lycopersicum]
          Length = 738

 Score =  116 bits (290), Expect = 9e-24
 Identities = 91/250 (36%), Positives = 116/250 (46%), Gaps = 2/250 (0%)
 Frame = +2

Query: 8   ENEDGNERNIGLREVKYVNLNGDLRDSLQMVKTKSEKCKTFEENKVVVAAAVLDDESKKK 187
           +N DG  +N  LR+VK + LNG+L++SLQ+VKTK+EKC     NK               
Sbjct: 343 QNMDG--KNCDLRKVKSMCLNGNLKNSLQIVKTKTEKC-----NK--------------- 380

Query: 188 NLEGSFEENKVVADDVLDDESKRDLEGSXXXXXXXXXXXXXKVITRSNVECQVKSPLTXX 367
               SFE+NKV+ ++    E K +LE                 I    VE +        
Sbjct: 381 ----SFEKNKVLEENC---EEKLNLENEDFK------------ILEEEVEKE-------- 413

Query: 368 XXXXXXXXXXXXXXXXXXXXXXXXXXXINVAKQIIKPKKTLIEENNKVHIGNNEKKTVXX 547
                                       N   + IK KK +I E  KVH  NNEKK +  
Sbjct: 414 ----------------------------NSLAKEIKTKKIVIVEEKKVHTSNNEKKQMSI 445

Query: 548 XXXXXXXXXXXX-GQSR-IHHHPSPTRTKPVPSSNEFQTNIPRQHSNLQSLVDLVMWREA 721
                        GQSR +HHH + +RTKPVP S+E+Q NIPRQHS L SL DLVMW + 
Sbjct: 446 SPIIKKQSIPSFSGQSRTLHHHSNQSRTKPVPVSDEYQRNIPRQHSKLASLADLVMWTDT 505

Query: 722 SKSTLVFGIG 751
           SKS L+FGIG
Sbjct: 506 SKSALIFGIG 515


>ref|XP_004251753.1| PREDICTED: reticulon-like protein B21-like [Solanum lycopersicum]
          Length = 653

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 75/226 (33%), Positives = 96/226 (42%)
 Frame = +2

Query: 74  DLRDSLQMVKTKSEKCKTFEENKVVVAAAVLDDESKKKNLEGSFEENKVVADDVLDDESK 253
           +L DS+++ KTKSE+    EE K + +  V + ES KK LE + E      DD  DDE  
Sbjct: 262 NLEDSIEIKKTKSEEFGMCEE-KFITSNVVSEAESVKK-LEKNLENED---DDDDDDEWD 316

Query: 254 RDLEGSXXXXXXXXXXXXXKVITRSNVECQVKSPLTXXXXXXXXXXXXXXXXXXXXXXXX 433
             LE               + I   N +  V+                            
Sbjct: 317 DVLE---------------EEIDEGNDKRSVE---------------------------- 333

Query: 434 XXXXXINVAKQIIKPKKTLIEENNKVHIGNNEKKTVXXXXXXXXXXXXXXGQSRIHHHPS 613
                I V +Q  K KK +IEE    +   N K+ +              G + IH   S
Sbjct: 334 --VKEIRVQEQN-KLKKIVIEEKRFQY---NNKRQMPITSINMKQSPPTLGNANIHQ--S 385

Query: 614 PTRTKPVPSSNEFQTNIPRQHSNLQSLVDLVMWREASKSTLVFGIG 751
            TRTK    S+EFQ+   +QHS LQSLVDLVMWR  SKS LVFGIG
Sbjct: 386 ATRTK----SDEFQS---KQHSKLQSLVDLVMWRNVSKSALVFGIG 424


>ref|XP_006350096.1| PREDICTED: reticulon-like protein B21-like [Solanum tuberosum]
          Length = 644

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 33/49 (67%), Positives = 36/49 (73%)
 Frame = +2

Query: 605 HPSPTRTKPVPSSNEFQTNIPRQHSNLQSLVDLVMWREASKSTLVFGIG 751
           H S TRTK    S+EFQ+   RQ+S LQSLVDLVMWR  SKS LVFGIG
Sbjct: 371 HQSATRTK----SDEFQS---RQYSKLQSLVDLVMWRNVSKSALVFGIG 412


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