BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00023384
         (1310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366356.1| PREDICTED: RNA polymerase II C-terminal doma...   149   2e-33
ref|XP_004246330.1| PREDICTED: RNA polymerase II C-terminal doma...   145   4e-32
ref|XP_006429344.1| hypothetical protein CICLE_v10011105mg [Citr...    91   1e-15
ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    90   2e-15
emb|CBI30403.3| unnamed protein product [Vitis vinifera]               90   2e-15
ref|XP_002528114.1| double-stranded RNA binding protein, putativ...    83   3e-13
gb|EOY07247.1| RNA polymerase II C-terminal domain phosphatase-l...    82   5e-13
gb|ESW12354.1| hypothetical protein PHAVU_008G105400g [Phaseolus...    81   8e-13
emb|CAN60109.1| hypothetical protein VITISV_044329 [Vitis vinifera]    81   1e-12
ref|XP_006481011.1| PREDICTED: RNA polymerase II C-terminal doma...    80   2e-12
ref|XP_006481010.1| PREDICTED: RNA polymerase II C-terminal doma...    80   2e-12
ref|XP_006481007.1| PREDICTED: RNA polymerase II C-terminal doma...    80   2e-12
ref|XP_006481006.1| PREDICTED: RNA polymerase II C-terminal doma...    80   2e-12
ref|XP_006429349.1| hypothetical protein CICLE_v10011105mg [Citr...    80   2e-12
ref|XP_006429346.1| hypothetical protein CICLE_v10011105mg [Citr...    80   2e-12
ref|XP_004492424.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    79   4e-12
gb|ESW12356.1| hypothetical protein PHAVU_008G105400g [Phaseolus...    77   1e-11
gb|ESW12355.1| hypothetical protein PHAVU_008G105400g [Phaseolus...    77   1e-11
ref|XP_003623236.1| RNA polymerase II C-terminal domain phosphat...    77   2e-11
gb|EOY07244.1| RNA polymerase II C-terminal domain phosphatase-l...    76   4e-11

>ref|XP_006366356.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like [Solanum tuberosum]
          Length = 811

 Score =  149 bits (377), Expect = 2e-33
 Identities = 72/88 (81%), Positives = 80/88 (90%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVNHVDARSVE 1129
            RKDAQQ AAENALRN+A +Y+SYITSHPR ADKDFDK+SVENENGFLW+TVNHVD  SVE
Sbjct: 724  RKDAQQQAAENALRNMAGEYVSYITSHPRAADKDFDKISVENENGFLWETVNHVDEPSVE 783

Query: 1128 DRLPQVSVSEVGVNGDAAHN*LLRSLKT 1045
            DRLPQV+VSEVGVNGDA+H+  L SLKT
Sbjct: 784  DRLPQVNVSEVGVNGDASHDRSLNSLKT 811


>ref|XP_004246330.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like [Solanum lycopersicum]
          Length = 808

 Score =  145 bits (366), Expect = 4e-32
 Identities = 70/88 (79%), Positives = 77/88 (87%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVNHVDARSVE 1129
            RKDAQQ AAENALRN+A  Y+SYITSHP   DKDFDK+SVENENGFLWDTVNHVD  SV+
Sbjct: 721  RKDAQQQAAENALRNMAGNYVSYITSHPLAVDKDFDKISVENENGFLWDTVNHVDEPSVD 780

Query: 1128 DRLPQVSVSEVGVNGDAAHN*LLRSLKT 1045
            DRLPQV+VSEVGVNGDA+H+  L SLKT
Sbjct: 781  DRLPQVNVSEVGVNGDASHDRSLNSLKT 808


>ref|XP_006429344.1| hypothetical protein CICLE_v10011105mg [Citrus clementina]
            gi|567873511|ref|XP_006429345.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|557531401|gb|ESR42584.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|557531402|gb|ESR42585.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
          Length = 755

 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 46/78 (58%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVNHVDARSV- 1132
            RKDAQQ AAENAL  LA+KY++YIT      D+DFDKLS+ENENGFLWDT+       + 
Sbjct: 675  RKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTIISESNEGLG 734

Query: 1131 EDRLPQVSVSEVGVNGDA 1078
            ED L + S  EVG++GDA
Sbjct: 735  EDGLRKESTPEVGISGDA 752


>ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
            phosphatase-like 2-like [Vitis vinifera]
          Length = 789

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVNHVDAR-SV 1132
            RKDAQQ AAENAL +LADKY++Y T H    DKDFDKLS+ NENGFLWDT +   +   +
Sbjct: 659  RKDAQQQAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNENGFLWDTTSAGSSELLM 718

Query: 1131 EDRLPQVSVSEVG 1093
            ED  P+ S+SE G
Sbjct: 719  EDGFPKESISEAG 731


>emb|CBI30403.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVNHVDAR-SV 1132
            RKDAQQ AAENAL +LADKY++Y T H    DKDFDKLS+ NENGFLWDT +   +   +
Sbjct: 723  RKDAQQQAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNENGFLWDTTSAGSSELLM 782

Query: 1131 EDRLPQVSVSEVG 1093
            ED  P+ S+SE G
Sbjct: 783  EDGFPKESISEAG 795


>ref|XP_002528114.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223532503|gb|EEF34293.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 786

 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVNHVDARSV- 1132
            RKDA Q AAENALR LA+KY++YIT H    D DFDKLS+ NENGFLWD VN   + +V 
Sbjct: 655  RKDAHQQAAENALRCLAEKYVAYITPHSGAVDHDFDKLSIGNENGFLWDIVNSGSSETVP 714

Query: 1131 -----EDRLPQVSVSEVGV 1090
                 ++R P+ +  E G+
Sbjct: 715  EDGVTKERTPEDNEVEPGI 733


>gb|EOY07247.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 4
            [Theobroma cacao]
          Length = 812

 Score = 82.0 bits (201), Expect = 5e-13
 Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVNHVDARSV- 1132
            RKDAQQ AAE AL NLA+KY++YI       D+DF+KLS+  ENGFLWD VN   + ++ 
Sbjct: 733  RKDAQQQAAELALHNLAEKYLAYIAPRSGAVDRDFNKLSLGTENGFLWD-VNPASSEALR 791

Query: 1131 EDRLPQVSVSEVGVNGDA 1078
            ED LP+ S SEVG+  DA
Sbjct: 792  EDGLPKDSTSEVGIPDDA 809


>gb|ESW12354.1| hypothetical protein PHAVU_008G105400g [Phaseolus vulgaris]
          Length = 806

 Score = 81.3 bits (199), Expect = 8e-13
 Identities = 40/73 (54%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVN-HVDARSV 1132
            RKDAQQ AAENALR+LA+KY++++    RV D++FDKLS+  +NGFLWD VN   +    
Sbjct: 727  RKDAQQQAAENALRSLAEKYVAHVEPQCRVVDREFDKLSLGRDNGFLWDVVNPESNELRR 786

Query: 1131 EDRLPQVSVSEVG 1093
            ED +P+ + SEVG
Sbjct: 787  EDGVPRENASEVG 799


>emb|CAN60109.1| hypothetical protein VITISV_044329 [Vitis vinifera]
          Length = 858

 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 44/86 (51%), Positives = 53/86 (61%), Gaps = 14/86 (16%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLA-------------DKYISYITSHPRVADKDFDKLSVENENGFL 1168
            RKDAQQ AAENAL +LA             DKY++Y T H    DKDFDKLS+ NENGFL
Sbjct: 689  RKDAQQQAAENALHSLAEHDNKVLMYFLWPDKYVAYTTPHSGAVDKDFDKLSLSNENGFL 748

Query: 1167 WDTVNHVDAR-SVEDRLPQVSVSEVG 1093
            WDT +   +   +ED  P+ S+SE G
Sbjct: 749  WDTTSAGSSELLMEDGFPKESISEAG 774


>ref|XP_006481011.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like isoform X6 [Citrus sinensis]
          Length = 506

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTV 1156
            RKDAQQ AAENAL  LA+KY++YIT      D+DFDKLS+ENENGFLWDT+
Sbjct: 393  RKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTI 443


>ref|XP_006481010.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like isoform X5 [Citrus sinensis]
          Length = 770

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTV 1156
            RKDAQQ AAENAL  LA+KY++YIT      D+DFDKLS+ENENGFLWDT+
Sbjct: 657  RKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTI 707


>ref|XP_006481007.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like isoform X2 [Citrus sinensis]
            gi|568854805|ref|XP_006481008.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 2-like
            isoform X3 [Citrus sinensis]
            gi|568854807|ref|XP_006481009.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 2-like
            isoform X4 [Citrus sinensis]
          Length = 771

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTV 1156
            RKDAQQ AAENAL  LA+KY++YIT      D+DFDKLS+ENENGFLWDT+
Sbjct: 675  RKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTI 725


>ref|XP_006481006.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like isoform X1 [Citrus sinensis]
          Length = 788

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTV 1156
            RKDAQQ AAENAL  LA+KY++YIT      D+DFDKLS+ENENGFLWDT+
Sbjct: 675  RKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTI 725


>ref|XP_006429349.1| hypothetical protein CICLE_v10011105mg [Citrus clementina]
            gi|557531406|gb|ESR42589.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
          Length = 788

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTV 1156
            RKDAQQ AAENAL  LA+KY++YIT      D+DFDKLS+ENENGFLWDT+
Sbjct: 675  RKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTI 725


>ref|XP_006429346.1| hypothetical protein CICLE_v10011105mg [Citrus clementina]
            gi|567873515|ref|XP_006429347.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|567873517|ref|XP_006429348.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|557531403|gb|ESR42586.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|557531404|gb|ESR42587.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
            gi|557531405|gb|ESR42588.1| hypothetical protein
            CICLE_v10011105mg [Citrus clementina]
          Length = 771

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTV 1156
            RKDAQQ AAENAL  LA+KY++YIT      D+DFDKLS+ENENGFLWDT+
Sbjct: 675  RKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGFLWDTI 725


>ref|XP_004492424.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
            phosphatase-like 2-like [Cicer arietinum]
          Length = 795

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVN-HVDARSV 1132
            RKDAQQ AAENALR+LA+KY++++    R  +++FDKLS+ +ENGFLWD VN        
Sbjct: 700  RKDAQQQAAENALRSLAEKYVAHMEPQCRAVNREFDKLSLGHENGFLWDVVNPETSELQT 759

Query: 1131 EDRLPQVSVSE 1099
            ED LP+ S SE
Sbjct: 760  EDGLPRESASE 770


>gb|ESW12356.1| hypothetical protein PHAVU_008G105400g [Phaseolus vulgaris]
          Length = 834

 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVN-HVDARSV 1132
            RKDAQQ AAENALR+LA+KY++++    RV D++FDKLS+  +NGFLWD VN   +    
Sbjct: 727  RKDAQQQAAENALRSLAEKYVAHVEPQCRVVDREFDKLSLGRDNGFLWDVVNPESNELRR 786

Query: 1131 EDRLPQVSVSE 1099
            ED +P+ + SE
Sbjct: 787  EDGVPRENASE 797


>gb|ESW12355.1| hypothetical protein PHAVU_008G105400g [Phaseolus vulgaris]
          Length = 802

 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVN-HVDARSV 1132
            RKDAQQ AAENALR+LA+KY++++    RV D++FDKLS+  +NGFLWD VN   +    
Sbjct: 727  RKDAQQQAAENALRSLAEKYVAHVEPQCRVVDREFDKLSLGRDNGFLWDVVNPESNELRR 786

Query: 1131 EDRLPQVSVSE 1099
            ED +P+ + SE
Sbjct: 787  EDGVPRENASE 797


>ref|XP_003623236.1| RNA polymerase II C-terminal domain phosphatase-like protein
            [Medicago truncatula] gi|355498251|gb|AES79454.1| RNA
            polymerase II C-terminal domain phosphatase-like protein
            [Medicago truncatula]
          Length = 796

 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVNHVDAR-SV 1132
            RKDAQQ AAENALR+LA+KY+ ++    +  + +FDKLS+E+ENGFLWD VN        
Sbjct: 695  RKDAQQQAAENALRSLAEKYLGHMEPQSKAVNTEFDKLSIEHENGFLWDVVNPESVELQT 754

Query: 1131 EDRLPQVSVSE 1099
            ED L + S SE
Sbjct: 755  EDGLQRESASE 765


>gb|EOY07244.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 1
            [Theobroma cacao]
          Length = 862

 Score = 75.9 bits (185), Expect = 4e-11
 Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
 Frame = -3

Query: 1308 RKDAQQHAAENALRNLADKYISYITSHPRVADKDFDKLSVENENGFLWDTVNHVDARSV- 1132
            RKDAQQ AAE AL NLA+KY++YI       D+DF+KLS+  ENGFLWD VN   + ++ 
Sbjct: 733  RKDAQQQAAELALHNLAEKYLAYIAPRSGAVDRDFNKLSLGTENGFLWD-VNPASSEALR 791

Query: 1131 EDRLPQVSVSEV 1096
            ED LP+ S SEV
Sbjct: 792  EDGLPKDSTSEV 803