BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00023290
         (678 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   233   e-104
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   222   e-101
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    220   e-101
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     220   e-101
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    222   e-101
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     221   e-101
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   217   8e-99
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   220   2e-98
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   164   6e-78
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   155   2e-73
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   154   4e-73
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]       162   4e-73
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   151   2e-72
gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe...   147   1e-68
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   143   2e-67
gb|EPS62146.1| hypothetical protein M569_12646, partial [Genlise...   158   2e-66
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   144   6e-66
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   139   3e-64
gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus...   138   6e-64
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   136   3e-63

>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
           tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
           tuberosum]
          Length = 1198

 Score =  233 bits (595), Expect(2) = e-104
 Identities = 111/129 (86%), Positives = 118/129 (91%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           I ECKDFASLV+LLQL SSP VFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR
Sbjct: 206 INECKDFASLVLLLQLTSSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 265

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
           FNTYR+SIRPRNGPS ++ M YF ESRVP+ EQ NRQ LRV DEPDFGVS+SEPFFCFQN
Sbjct: 266 FNTYRISIRPRNGPSLKKAMNYFRESRVPVVEQGNRQMLRVRDEPDFGVSLSEPFFCFQN 325

Query: 27  HEGVSFKVL 1
           HEG+SFKVL
Sbjct: 326 HEGISFKVL 334



 Score =  171 bits (434), Expect(2) = e-104
 Identities = 78/97 (80%), Positives = 89/97 (91%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NPF +N+RRRT MPFKFSDVGVEIGVLVS DDF+VGW+GP +GVNFLVDPFNGT
Sbjct: 109 VSLGPENPFNMNKRRRTIMPFKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGT 168

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CKILFT++T F F+GE +HAVI CNFKIEFLLREIN+
Sbjct: 169 CKILFTRDTAFCFKGEGKHAVIKCNFKIEFLLREINE 205


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  222 bits (565), Expect(2) = e-101
 Identities = 110/129 (85%), Positives = 116/129 (89%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK+CKDF SLVILLQLASSP VFYRTADDDIEESVAFDLLDDDDQWIRTTDIT SGAIGR
Sbjct: 206 IKKCKDFMSLVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGR 265

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            NTYR+SIRPRNGPSFE+ M YFS  RVPM E CNR+ LRV DEPDFGVSMS+PFFCFQN
Sbjct: 266 CNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPDFGVSMSDPFFCFQN 325

Query: 27  HEGVSFKVL 1
            EG+SFKVL
Sbjct: 326 -EGISFKVL 333



 Score =  174 bits (441), Expect(2) = e-101
 Identities = 80/97 (82%), Positives = 92/97 (94%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NP+ LN+RRRTTMPFKFSDV VE+GVLVS+ DF+VGW+GP TGV+FLVDPFNGT
Sbjct: 109 VSLGPENPYRLNQRRRTTMPFKFSDVSVEMGVLVSKHDFVVGWRGPRTGVDFLVDPFNGT 168

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CKILFTK+TVFSFRGEARHA+I CNFKIEFL+REIN+
Sbjct: 169 CKILFTKDTVFSFRGEARHAIIKCNFKIEFLVREINE 205


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  220 bits (561), Expect(2) = e-101
 Identities = 108/129 (83%), Positives = 115/129 (89%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK+CKDF SLVIL QLASSP VFYRTADDDIEESVAFDLLDDDDQWIRTTDIT SGAIGR
Sbjct: 206 IKKCKDFTSLVILFQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGR 265

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            NTYR+SIRPRNGPSFE+ M YFS  RVPM E CNR+ LRV DEPDFGVSMS+PFFCFQN
Sbjct: 266 CNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCNRKMLRVKDEPDFGVSMSDPFFCFQN 325

Query: 27  HEGVSFKVL 1
            EG+SFKV+
Sbjct: 326 -EGISFKVM 333



 Score =  175 bits (444), Expect(2) = e-101
 Identities = 80/97 (82%), Positives = 92/97 (94%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NP+ LN+RRRTTMPFKFSDV VE+GVLVS+DDF+VGW+GP TGV+FLVDPFNGT
Sbjct: 109 VSLGPENPYRLNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGT 168

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CKILFTK+T FSFRGEARHA+I CNFKIEFL+REIN+
Sbjct: 169 CKILFTKDTAFSFRGEARHAIIKCNFKIEFLVREINE 205


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  220 bits (560), Expect(2) = e-101
 Identities = 108/129 (83%), Positives = 115/129 (89%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK+CKDF SLVIL QLASSP VFYRTADDDIEESVAFDLLDDDDQWIRTTDIT SGAIGR
Sbjct: 206 IKKCKDFTSLVILFQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGR 265

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            NTYR+SIRPRNGPSFE+ M YFS  RVPM E CNR+ LRV DEPDFGVSMS+PFFCFQN
Sbjct: 266 CNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCNRKMLRVKDEPDFGVSMSDPFFCFQN 325

Query: 27  HEGVSFKVL 1
            EG+SF+VL
Sbjct: 326 -EGISFRVL 333



 Score =  175 bits (444), Expect(2) = e-101
 Identities = 80/97 (82%), Positives = 92/97 (94%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NP+ LN+RRRTTMPFKFSDV VE+GVLVS+DDF+VGW+GP TGV+FLVDPFNGT
Sbjct: 109 VSLGPENPYRLNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGT 168

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CKILFTK+T FSFRGEARHA+I CNFKIEFL+REIN+
Sbjct: 169 CKILFTKDTAFSFRGEARHAIIKCNFKIEFLVREINE 205


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  222 bits (565), Expect(2) = e-101
 Identities = 109/129 (84%), Positives = 116/129 (89%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK+CKDF SLVILLQLASSP VFYRTADDDIEESVAFDLLDDDDQWIRTTDIT SGAIGR
Sbjct: 206 IKKCKDFTSLVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGR 265

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            NTYR+SIRPRNGPSFE+ M YFS  RVPM E CNR+ LRV DEPDFGVSMS+PFFCFQN
Sbjct: 266 CNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVKDEPDFGVSMSDPFFCFQN 325

Query: 27  HEGVSFKVL 1
            EG+SFKV+
Sbjct: 326 -EGISFKVM 333



 Score =  173 bits (438), Expect(2) = e-101
 Identities = 78/97 (80%), Positives = 91/97 (93%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NP+ LN+RRRTTMPFKFSDV VE+GVLVS+DDF+VGW+GP TGV+F VDPFNGT
Sbjct: 109 VSLGPENPYRLNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGT 168

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CKILFTK+T FSFRGEARHA+I CNFKIEF++REIN+
Sbjct: 169 CKILFTKDTAFSFRGEARHAIIKCNFKIEFMVREINE 205


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  221 bits (564), Expect(2) = e-101
 Identities = 109/129 (84%), Positives = 116/129 (89%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK+CKDF SLVILLQLASSP VFYRTADDDIEESVAFDLLDDDDQWIRTTDIT SGAIGR
Sbjct: 206 IKKCKDFTSLVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGR 265

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            NTYR+SIRPRNGPSFE+ M YFS  RVPM E CNR+ LRV DEPDFGVSMS+PFFCFQN
Sbjct: 266 CNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPDFGVSMSDPFFCFQN 325

Query: 27  HEGVSFKVL 1
            EG+SFKV+
Sbjct: 326 -EGISFKVM 333



 Score =  173 bits (438), Expect(2) = e-101
 Identities = 78/97 (80%), Positives = 91/97 (93%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NP+ LN+RRRTTMPFKFSDV +E+GVLVS+DDF+VGW+GP TGV+FLVDPFNG 
Sbjct: 109 VSLGPENPYRLNQRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGA 168

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CKILFTK+T FSFRGEARHA+I CNFKIEFL+REIN+
Sbjct: 169 CKILFTKDTAFSFRGEARHAIIKCNFKIEFLVREINE 205


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  217 bits (553), Expect(2) = 8e-99
 Identities = 108/129 (83%), Positives = 115/129 (89%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK+ KDF SLVILLQLASSP VFYRTADDDIEESVAFDLLDDDDQWIRTTDIT SGAIGR
Sbjct: 206 IKKFKDFTSLVILLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGR 265

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            NTYR+SIRPRNGPSFE+ M YFS  RVPM E CNR+ LRV DEPDFGVSMS+PFFCFQN
Sbjct: 266 CNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPDFGVSMSDPFFCFQN 325

Query: 27  HEGVSFKVL 1
            EG+SFKV+
Sbjct: 326 -EGISFKVM 333



 Score =  170 bits (430), Expect(2) = 8e-99
 Identities = 76/97 (78%), Positives = 90/97 (92%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NP+ LN+RRRTTMPFKFSDV VE+GVLVS+DDF+VGW+GP TGV+F VDPFNG 
Sbjct: 109 VSLGPENPYRLNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGA 168

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CKILFTK+T FSFRGEA+HA+I CNFKIEF++REIN+
Sbjct: 169 CKILFTKDTAFSFRGEAKHAIIKCNFKIEFMVREINE 205


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
           gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
           6 [Solanum lycopersicum]
          Length = 1197

 Score =  220 bits (560), Expect(2) = 2e-98
 Identities = 108/129 (83%), Positives = 116/129 (89%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           I ECKDF+SLV+LLQLASSP VFYRTADDDIEESVAFDLLDDDDQWIRTTDIT SGAIGR
Sbjct: 206 INECKDFSSLVLLLQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITFSGAIGR 265

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
           FNTYRVSIRPRNGPSF++ M YF ESRVP+ EQ   Q LRV +EPDFG S+SEPFFCFQN
Sbjct: 266 FNTYRVSIRPRNGPSFKKAMNYFRESRVPVVEQ-GEQMLRVRNEPDFGESVSEPFFCFQN 324

Query: 27  HEGVSFKVL 1
           HEG+SFKVL
Sbjct: 325 HEGISFKVL 333



 Score =  166 bits (420), Expect(2) = 2e-98
 Identities = 76/97 (78%), Positives = 87/97 (89%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+N F +NERRRT MP+KFSDVGVEIGVLVS DDF+VGW+GP +GVNFLVDPFNG 
Sbjct: 109 VSLGPENTFNMNERRRTFMPYKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGK 168

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CKILFT++T F F+GE +HAVI CNFKIEFLLREIN+
Sbjct: 169 CKILFTRDTAFCFKGEGKHAVIKCNFKIEFLLREINE 205


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  164 bits (414), Expect(2) = 6e-78
 Identities = 76/129 (58%), Positives = 99/129 (76%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           +++ +D +SL++LLQL+SSP V+YRTADDDIEE+V FDLLDDDD WIRTTD T SGAIGR
Sbjct: 207 VRQRRDMSSLILLLQLSSSPFVYYRTADDDIEETVPFDLLDDDDPWIRTTDFTVSGAIGR 266

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            N+YR+SI PR G   ++ M Y    RV + E   + +LRV DEPDFG+ MS+PFFC Q+
Sbjct: 267 CNSYRISIPPRYGAKLKKAMDYLRARRVNVLEDSPKWQLRVRDEPDFGLPMSDPFFCIQH 326

Query: 27  HEGVSFKVL 1
            EG+ F+V+
Sbjct: 327 KEGIDFRVM 335



 Score =  154 bits (388), Expect(2) = 6e-78
 Identities = 67/97 (69%), Positives = 83/97 (85%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+ PF LN+RRRTT PFKF DV +EIG+LVS D++  GW+GP +GV+FLVDPF+GT
Sbjct: 110 VSLGPETPFHLNQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGT 169

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CK LFTK+T FSF+G  +HAVI CNFK+EFL+REIN+
Sbjct: 170 CKFLFTKDTAFSFKGMPKHAVIKCNFKVEFLVREINE 206


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score =  155 bits (391), Expect(2) = 2e-73
 Identities = 75/129 (58%), Positives = 98/129 (75%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK+  + + LV+LLQLAS+P+V+YRTADDDIE SV FDLLDDDD WIRTTD T SGAIGR
Sbjct: 207 IKQYTETSCLVLLLQLASAPRVWYRTADDDIEVSVPFDLLDDDDPWIRTTDFTASGAIGR 266

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            ++YRVSI PR+GP   + + +  E RV   E+  R+ +R+ DEPDFG+ M++PFFC  +
Sbjct: 267 CHSYRVSIPPRHGPKLRKAVDFLKERRV--QEEYLRRPIRIRDEPDFGMPMTDPFFCIHH 324

Query: 27  HEGVSFKVL 1
            EG++F VL
Sbjct: 325 KEGIAFDVL 333



 Score =  147 bits (372), Expect(2) = 2e-73
 Identities = 65/96 (67%), Positives = 80/96 (83%)
 Frame = -3

Query: 673 SLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGTC 494
           SLGP+NPF LN+RRR T PFK S VGVEIG LVS D+F VGW+GP TGV+FLVDPF+GTC
Sbjct: 111 SLGPENPFTLNQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTC 170

Query: 493 KILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           +  F++NT FSF+  A HAVI C+FK+EFL+R+IN+
Sbjct: 171 RFCFSRNTAFSFKSTAEHAVIKCDFKVEFLVRDINE 206


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score =  154 bits (390), Expect(2) = 4e-73
 Identities = 75/121 (61%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
 Frame = -1

Query: 360 LVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGRFNTYRVSIR 181
           LV+LLQLAS+P V+YRTADDDIE  V FDLLDDDD WIRTTD T SGAIGR ++YRVSI 
Sbjct: 216 LVLLLQLASAPWVWYRTADDDIEAWVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIP 275

Query: 180 PRNGPSFERTMKYFSESRVP-MAEQCNRQRLRVSDEPDFGVSMSEPFFCFQNHEGVSFKV 4
           PR+G    + +KY  E RV  + E+ +R+R+R+ DEPDFG+ MS+PFFC  + EG++F+V
Sbjct: 276 PRHGSKLRKAVKYLKERRVQVLQEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEV 335

Query: 3   L 1
           L
Sbjct: 336 L 336



 Score =  147 bits (370), Expect(2) = 4e-73
 Identities = 65/97 (67%), Positives = 81/97 (83%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NPF LN+RRRTT PFK SDVG EIG LVS D+F VGW+GP +GV+FLVDPF+GT
Sbjct: 110 VSLGPKNPFTLNQRRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGT 169

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CK  F++NT FS +  + HAVI C+FK+EFL+R+IN+
Sbjct: 170 CKFCFSRNTAFSLKSTSEHAVIKCDFKVEFLVRDINE 206


>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score =  162 bits (409), Expect(2) = 4e-73
 Identities = 80/129 (62%), Positives = 98/129 (75%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK+  + + LV+ LQLASSP+V+YRTADD+IEESV FDLLDDDDQWIRTTD T SGAIGR
Sbjct: 207 IKQYTEPSGLVVFLQLASSPRVWYRTADDEIEESVPFDLLDDDDQWIRTTDFTPSGAIGR 266

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            NTYRV IRPR+G   ++ + Y  E RVPM     R  LR+SDEPDFG SMS+PF+C   
Sbjct: 267 CNTYRVVIRPRHGAKLKKALDYLREQRVPM--DYVRWPLRISDEPDFGRSMSDPFYCIDY 324

Query: 27  HEGVSFKVL 1
            EG+ F+++
Sbjct: 325 KEGIPFEIM 333



 Score =  139 bits (351), Expect(2) = 4e-73
 Identities = 60/97 (61%), Positives = 80/97 (82%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NP++LN RRR T PFK SDV ++IG +VS D+F VGW+GP  GV+FLVDPF+GT
Sbjct: 110 VSLGPENPYYLNRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGT 169

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CK  F+++T FSF+G   +AVI C+FK+EFL+R+IN+
Sbjct: 170 CKFCFSRDTAFSFKGTTEYAVIKCDFKVEFLVRDINE 206


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  151 bits (381), Expect(2) = 2e-72
 Identities = 67/97 (69%), Positives = 83/97 (85%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NPF LN+RRRTT+PFK SDV VEIG LVS D+FLVGW+GP +GV+FLVDPF+G 
Sbjct: 110 VSLGPENPFHLNQRRRTTIPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGK 169

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CK  FT++T FSF+G   HAVI C+FK+EFL+R+IN+
Sbjct: 170 CKFCFTRDTAFSFKGTTEHAVIRCDFKLEFLVRDINE 206



 Score =  148 bits (374), Expect(2) = 2e-72
 Identities = 75/129 (58%), Positives = 93/129 (72%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK+  D + LVILLQLAS+P V+YRTADDDIE  V FDLLDDDD WIRTTD T SGAIGR
Sbjct: 207 IKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVPFDLLDDDDPWIRTTDFTPSGAIGR 266

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            N+YRVSI PR+G   +R + +  E RV   E C R+ L V+ EP++ + MS+PFFC  +
Sbjct: 267 CNSYRVSIPPRHGAKLKRALNFLRERRV--QEDCLRRPLHVTAEPEYEMPMSDPFFCIHH 324

Query: 27  HEGVSFKVL 1
            EGV F ++
Sbjct: 325 EEGVDFNLM 333


>gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  147 bits (371), Expect(2) = 1e-68
 Identities = 75/129 (58%), Positives = 93/129 (72%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK+  D + LVILL+L SSP V YRTADDDI++SV FDLLDDDD WIRTTD T SGAIGR
Sbjct: 206 IKQYTDTSYLVILLRLTSSPWVSYRTADDDIDQSVPFDLLDDDDPWIRTTDFTPSGAIGR 265

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            N+YRV I PR+G   ++ M Y  E RV   E C +   ++ DEPDFG+S +EPFF  Q 
Sbjct: 266 CNSYRVLIPPRHGAKLKKAMNYLRERRV--KEVCIKWPPKIQDEPDFGMSNTEPFFSIQY 323

Query: 27  HEGVSFKVL 1
            EG+SF+++
Sbjct: 324 EEGISFEIM 332



 Score =  139 bits (351), Expect(2) = 1e-68
 Identities = 62/95 (65%), Positives = 76/95 (80%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NP+FLN RRRT  PFK SDV VEIG LV +D+F   W+GP  GV+F+VDPF+GT
Sbjct: 109 VSLGPENPYFLNRRRRTKTPFKLSDVHVEIGSLVRQDEFFASWRGPPYGVDFIVDPFDGT 168

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREI 392
           CK  FT +T FSF+G  +HAVI C+FK+EFL+REI
Sbjct: 169 CKFCFTMDTAFSFKGTKKHAVIKCDFKVEFLVREI 203


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score =  143 bits (361), Expect(2) = 2e-67
 Identities = 72/129 (55%), Positives = 94/129 (72%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           +K+  +    V+LLQLASSP V+YRTADDD E++V F LLDDDDQWIRTTD T SGAIGR
Sbjct: 207 VKQYSEPTGFVVLLQLASSPWVWYRTADDDFEKTVPFGLLDDDDQWIRTTDFTASGAIGR 266

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            NTYRV +RPR+G   ++ M Y  E RVP+ +   R +LR+ DEPDFG SMS+ F+ +  
Sbjct: 267 CNTYRVLVRPRHGLKLKKAMDYLRERRVPVEDL--RSQLRIRDEPDFGRSMSDHFY-YIY 323

Query: 27  HEGVSFKVL 1
            EG+ F+++
Sbjct: 324 KEGIPFEIM 332



 Score =  139 bits (350), Expect(2) = 2e-67
 Identities = 61/97 (62%), Positives = 78/97 (80%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NP++LN RRR T PFK  DV +EIG L S D+F+VGW+GP +GV FLVDPF+ T
Sbjct: 110 VSLGPENPYYLNRRRRDTTPFKLPDVSLEIGTLASCDEFIVGWRGPPSGVEFLVDPFDCT 169

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           CK  F+++T FSF+G   HAVI C+FK+EFL+REIN+
Sbjct: 170 CKFCFSRDTAFSFKGTNEHAVIKCDFKVEFLVREINE 206


>gb|EPS62146.1| hypothetical protein M569_12646, partial [Genlisea aurea]
          Length = 1195

 Score =  158 bits (400), Expect(2) = 2e-66
 Identities = 73/128 (57%), Positives = 96/128 (75%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK  +DF SL+I+LQL SSP ++YRTADDDIE++V FDLL+DDD WIRTTD T +GAIGR
Sbjct: 200 IKRYRDFYSLIIMLQLFSSPLIYYRTADDDIEDAVPFDLLEDDDPWIRTTDFTSTGAIGR 259

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            NTYR+S+RP +GP   + + Y    RV + ++   + +RV DEP FG  MS+PFFC QN
Sbjct: 260 CNTYRISVRPLSGPQLLKALDYLRLRRVKVFDEFKGKHIRVMDEPGFGTLMSDPFFCIQN 319

Query: 27  HEGVSFKV 4
            +G+SFK+
Sbjct: 320 VKGLSFKI 327



 Score =  120 bits (302), Expect(2) = 2e-66
 Identities = 55/95 (57%), Positives = 70/95 (73%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           V LGPQNP  +NERRRT   +K  DV VE+G + S+++F VGW+GP +GV+F+VDP+NGT
Sbjct: 103 VGLGPQNPHRMNERRRTISSYKLFDVSVEVGSMKSQNEFYVGWRGPSSGVDFIVDPYNGT 162

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREI 392
           CKI F ++T FS   E R  V+ CNFKIEF  REI
Sbjct: 163 CKIQFERDTAFSITDEDRLVVMKCNFKIEFTPREI 197


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571459266|ref|XP_006581359.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  144 bits (363), Expect(2) = 6e-66
 Identities = 74/129 (57%), Positives = 88/129 (68%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           IK   D + LV+LL LASSP V+YRTADDDIEESV FDLLDDDD WIRTTD T SGAIGR
Sbjct: 207 IKRYNDTSYLVVLLHLASSPWVWYRTADDDIEESVPFDLLDDDDPWIRTTDFTPSGAIGR 266

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            N YR+SI PR+G    + M Y    RV M E   +Q LR  +EPDFGV MS+ FF    
Sbjct: 267 CNFYRISIPPRHGAKLMKAMLYLKGQRVQMQELALKQTLRTLNEPDFGVPMSDAFFYIHF 326

Query: 27  HEGVSFKVL 1
            + ++F ++
Sbjct: 327 QKDIAFDIM 335



 Score =  133 bits (335), Expect(2) = 6e-66
 Identities = 59/97 (60%), Positives = 77/97 (79%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VS GP+NP+FLN+RRRTT PFK SDV VEIG LVS  +F V W+GPD GV FLVDPF+G 
Sbjct: 110 VSCGPENPYFLNQRRRTTTPFKMSDVLVEIGTLVSPGEFFVSWRGPDKGVKFLVDPFDGM 169

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           C+  F+++T FSF+G  + AVI C+F++ FL+R+IN+
Sbjct: 170 CRFCFSRDTAFSFKGIEKKAVIKCDFQVGFLVRDINE 206


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571449461|ref|XP_006578148.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  139 bits (351), Expect(2) = 3e-64
 Identities = 71/129 (55%), Positives = 88/129 (68%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           I+   D + LV+LL LASSP V+YRTADDDIEESV FDLLDDDD WIRTTD T SGAIGR
Sbjct: 207 IRRYNDTSYLVVLLHLASSPWVWYRTADDDIEESVPFDLLDDDDPWIRTTDFTPSGAIGR 266

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            N YR+SI PR+G    + M Y    RV + E   +Q LR  +EPDFG+ MS+ FF    
Sbjct: 267 CNFYRISIPPRHGAKLMKAMLYLKGQRVQIQELPLKQTLRTQNEPDFGMPMSDAFFYVHF 326

Query: 27  HEGVSFKVL 1
            + ++F ++
Sbjct: 327 QKDIAFDIM 335



 Score =  132 bits (333), Expect(2) = 3e-64
 Identities = 59/97 (60%), Positives = 77/97 (79%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VS GP+NP+FLN+RRRTT PFK SDV VEIG LVS  +F V W+GPD GV FLVDPF+G 
Sbjct: 110 VSCGPKNPYFLNQRRRTTTPFKMSDVLVEIGTLVSPGEFFVSWRGPDKGVKFLVDPFDGM 169

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           C+  F+++T FSF+G  + AVI C+F++ FL+R+IN+
Sbjct: 170 CRFCFSRDTAFSFKGIDKKAVIKCDFQVGFLVRDINE 206


>gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score =  138 bits (348), Expect(2) = 6e-64
 Identities = 70/129 (54%), Positives = 86/129 (66%)
 Frame = -1

Query: 387 IKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGR 208
           I+   D + LV+LL LASSP V+YRTA+DDIE+ V FDLLDDDD WIRTTD T SGAIGR
Sbjct: 207 IRRYNDSSYLVVLLHLASSPWVWYRTAEDDIEDLVPFDLLDDDDPWIRTTDFTPSGAIGR 266

Query: 207 FNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCFQN 28
            N Y++SI PR+G    + M Y    RV M E   +Q LR  +EPDFG  MS PFF    
Sbjct: 267 CNFYKISIPPRHGAKLMKAMLYLKGQRVQMQELPLKQTLRALNEPDFGTPMSNPFFYIDY 326

Query: 27  HEGVSFKVL 1
             G++F ++
Sbjct: 327 QVGITFDIM 335



 Score =  132 bits (333), Expect(2) = 6e-64
 Identities = 59/97 (60%), Positives = 76/97 (78%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VS GP+NP+FLN+RRRTT+PFK SDV VEIG LVS  +F V WKGPD GV FLVDPF+G 
Sbjct: 110 VSCGPENPYFLNKRRRTTIPFKMSDVIVEIGTLVSPGEFFVAWKGPDKGVKFLVDPFDGM 169

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIND 386
           C+  FT++  F F+G  + AVI C+F++ FL+R+IN+
Sbjct: 170 CRFCFTRDIAFPFKGIEKEAVIKCDFQVGFLVRDINE 206


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
           sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
           sinensis]
          Length = 1197

 Score =  136 bits (343), Expect(2) = 3e-63
 Identities = 67/131 (51%), Positives = 92/131 (70%)
 Frame = -1

Query: 393 SMIKECKDFASLVILLQLASSPKVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAI 214
           +++K+  +F+ + ILLQLASSP+V+YRTADDDI   V FD+LDDDD WIRTTD T SGAI
Sbjct: 205 NLVKQYSEFSCVAILLQLASSPRVWYRTADDDILVLVPFDMLDDDDPWIRTTDFTPSGAI 264

Query: 213 GRFNTYRVSIRPRNGPSFERTMKYFSESRVPMAEQCNRQRLRVSDEPDFGVSMSEPFFCF 34
           GR N+YR+SI  R+     + + Y  E RV   +  +R  + + +EPDF V MS+PFFC 
Sbjct: 265 GRCNSYRISISSRHRGKLSKVITYLGERRV-QVDSLSRP-ITIREEPDFEVPMSDPFFCI 322

Query: 33  QNHEGVSFKVL 1
              EG+SF+++
Sbjct: 323 HYEEGISFEIM 333



 Score =  132 bits (332), Expect(2) = 3e-63
 Identities = 59/96 (61%), Positives = 73/96 (76%)
 Frame = -3

Query: 676 VSLGPQNPFFLNERRRTTMPFKFSDVGVEIGVLVSEDDFLVGWKGPDTGVNFLVDPFNGT 497
           VSLGP+NPF LN+R RT+ PFK  DV VEIG LVS D+F V W+GP +G +FLVDPF+GT
Sbjct: 110 VSLGPENPFRLNQRGRTSTPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGT 169

Query: 496 CKILFTKNTVFSFRGEARHAVINCNFKIEFLLREIN 389
           CK  FT++  F+ +    HAVI C FK+EFL+REIN
Sbjct: 170 CKFCFTRDIAFALKSSTEHAVIKCEFKVEFLVREIN 205