BLASTX nr result
ID: Atropa21_contig00023286
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00023286
(491 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61823.1| hypothetical protein VITISV_008493 [Vitis vinifera] 81 4e-28
emb|CAN71676.1| hypothetical protein VITISV_015838 [Vitis vinifera] 80 5e-28
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera] 80 2e-27
emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera] 82 5e-27
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 80 2e-26
gb|AAT38705.2| hypothetical protein SDM1_34t00015 [Solanum demis... 81 2e-26
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera] 74 7e-26
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera] 82 9e-26
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] 74 9e-26
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 73 1e-25
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 73 1e-25
gb|AAB82754.1| retrofit [Oryza longistaminata] 72 1e-25
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha... 82 2e-25
gb|AAT38708.1| Putative polyprotein, identical [Solanum demissum] 77 2e-25
gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsi... 80 3e-25
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 70 4e-25
emb|CAN69370.1| hypothetical protein VITISV_010057 [Vitis vinifera] 72 4e-25
ref|WP_003830793.1| reverse transcriptase family protein, partia... 72 5e-25
emb|CAN71273.1| hypothetical protein VITISV_019661 [Vitis vinifera] 70 6e-25
emb|CAN63730.1| hypothetical protein VITISV_030286 [Vitis vinifera] 73 8e-25
>emb|CAN61823.1| hypothetical protein VITISV_008493 [Vitis vinifera]
Length = 414
Score = 80.9 bits (198), Expect(2) = 4e-28
Identities = 37/68 (54%), Positives = 47/68 (69%)
Frame = +1
Query: 229 NDHLIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTA 408
N +D + YR+IIG L YL TRPDIAF V+RLS+ M +P +HW A KRLLRYL+ T
Sbjct: 165 NSECVDSTEYRKIIGALQYLGLTRPDIAFVVNRLSQFMQKPTTNHWAAAKRLLRYLKQTM 224
Query: 409 SFGVLIAK 432
G+L+ K
Sbjct: 225 FHGILLQK 232
Score = 69.7 bits (169), Expect(2) = 4e-28
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V+ II L FS+KD+G LHYFLG+EVI + GL LSQ +Y DLL +M+N K T
Sbjct: 93 VNNIINKLGSTFSVKDMGSLHYFLGIEVIPTPQGLFLSQHQYIRDLLSRTSMENAKETLT 152
Query: 194 PMTSTVILT 220
PM++T LT
Sbjct: 153 PMSTTAKLT 161
>emb|CAN71676.1| hypothetical protein VITISV_015838 [Vitis vinifera]
Length = 1352
Score = 80.5 bits (197), Expect(2) = 5e-28
Identities = 37/68 (54%), Positives = 48/68 (70%)
Frame = +1
Query: 229 NDHLIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTA 408
N +D + YR+IIG L YL TRP+IAFAV+RLS+ M +P +HW A KRLLRYL+ T
Sbjct: 181 NSECVDSTEYRKIIGALQYLGLTRPNIAFAVNRLSQFMQKPTTNHWAAAKRLLRYLKQTM 240
Query: 409 SFGVLIAK 432
G+L+ K
Sbjct: 241 FHGILLQK 248
Score = 69.7 bits (169), Expect(2) = 5e-28
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V+ II L FS+KD+G LHYFLG+EVI + GL LSQ +Y DLL +M+N K T
Sbjct: 109 VNNIINKLGSTFSVKDMGSLHYFLGIEVIPTPQGLFLSQHQYIRDLLSRTSMENAKETLT 168
Query: 194 PMTSTVILT 220
PM++T LT
Sbjct: 169 PMSTTAKLT 177
>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
Length = 1144
Score = 79.7 bits (195), Expect(2) = 2e-27
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 6/68 (8%)
Frame = +1
Query: 235 HLIDGSL------YRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYL 396
HL+DG+ YRR+IG L YLS TRPDI FAV++LS+ MH+P ++HW A KRLLRYL
Sbjct: 956 HLVDGTNAVNSTEYRRVIGSLQYLSLTRPDIXFAVNKLSQFMHKPTVTHWTATKRLLRYL 1015
Query: 397 RSTASFGV 420
+ T G+
Sbjct: 1016 KKTIFHGL 1023
Score = 68.6 bits (166), Expect(2) = 2e-27
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V +++ L +FSLKD+G LHYFLGVEVI ++ G+ LSQ KY D+L M K VST
Sbjct: 888 VAHVVTKLGDQFSLKDMGSLHYFLGVEVIPTTAGVFLSQHKYVRDILENTHMAGAKDVST 947
Query: 194 PMTST 208
P+++T
Sbjct: 948 PLSTT 952
>emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]
Length = 1044
Score = 81.6 bits (200), Expect(2) = 5e-27
Identities = 38/68 (55%), Positives = 51/68 (75%), Gaps = 6/68 (8%)
Frame = +1
Query: 235 HLIDG------SLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYL 396
HL+DG + YRR+IG L YLS TRPDI+FAV++LS+ MH+P+++HW A KRLLRYL
Sbjct: 797 HLVDGMNAINNTEYRRVIGNLQYLSLTRPDISFAVNKLSQFMHKPIVTHWTATKRLLRYL 856
Query: 397 RSTASFGV 420
+ T G+
Sbjct: 857 KKTIFHGL 864
Score = 65.1 bits (157), Expect(2) = 5e-27
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V +++ L +FSLKD+G LHYFLGVEVI ++ + LSQ KY D+L M K VST
Sbjct: 729 VAHVVTKLGDQFSLKDMGSLHYFLGVEVIPTTAVVFLSQHKYARDILENTHMAGAKDVST 788
Query: 194 PMTST 208
P+++T
Sbjct: 789 PLSTT 793
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 80.1 bits (196), Expect(2) = 2e-26
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +1
Query: 238 LIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFG 417
L D + YR ++G L YL+FTRPDIAFAV+RLS+ MH+P HW A KR+LRYL T S G
Sbjct: 1202 LDDATEYRTVLGSLQYLAFTRPDIAFAVNRLSQFMHRPTNEHWQAAKRILRYLAGTKSHG 1261
Query: 418 VLIAKES 438
+ + ++
Sbjct: 1262 IFLRSDT 1268
Score = 64.7 bits (156), Expect(2) = 2e-26
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2
Query: 32 ALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVSTPMTST 208
+L+ RFSLKDLGPL YFLG+E R+S GL L Q KY DLL + M + K VSTPM+ T
Sbjct: 1133 SLASRFSLKDLGPLSYFLGIEATRTSRGLHLMQRKYITDLLKKHNMLDTKPVSTPMSPT 1191
>gb|AAT38705.2| hypothetical protein SDM1_34t00015 [Solanum demissum]
Length = 963
Score = 80.1 bits (196), Expect(2) = 2e-26
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = +1
Query: 217 DPSPNDHLIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYL 396
D SP+ D LYRR IGKL YLSFTRPDIAFAV++LS+ M P + HW A+KR+LRYL
Sbjct: 91 DGSPS---ADAILYRRTIGKLQYLSFTRPDIAFAVNKLSRFMQSPSLEHWKAVKRVLRYL 147
Query: 397 RSTASFGVLIAKESTNYRLFAY 462
++ ++ + I+ S ++ L+ Y
Sbjct: 148 KALSTPCLQISSHS-DFNLYMY 168
Score = 64.3 bits (155), Expect(2) = 2e-26
Identities = 31/66 (46%), Positives = 48/66 (72%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V Y+I +L+ +FSLK+LG L+Y LG+EV G++LSQ +Y +++L V M + KGV+T
Sbjct: 20 VTYVINSLAYKFSLKNLGELNYLLGIEVKHVPNGIVLSQSRYILEILSYVDMTDCKGVTT 79
Query: 194 PMTSTV 211
PM S++
Sbjct: 80 PMCSSL 85
Score = 81.3 bits (199), Expect(2) = 5e-26
Identities = 41/74 (55%), Positives = 55/74 (74%)
Frame = +1
Query: 217 DPSPNDHLIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYL 396
D SP+ ID +LYRR IGKL YLSFTRPDIAFAV++LS+ M P + HW A+KR+LRYL
Sbjct: 439 DGSPS---IDATLYRRTIGKLQYLSFTRPDIAFAVNKLSRFMQSPSLEHWKAVKRVLRYL 495
Query: 397 RSTASFGVLIAKES 438
++ ++ + I+ S
Sbjct: 496 KALSTPCLQISSHS 509
Score = 62.0 bits (149), Expect(2) = 5e-26
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V Y+I +L+ +FSLK+L L+Y LG+EV G++LSQ +Y +++L V M + KGV+T
Sbjct: 368 VTYVINSLAYKFSLKNLSELNYLLGIEVKHVPNGIVLSQSRYILEILSYVDMTDCKGVTT 427
Query: 194 PMTSTV 211
PM S++
Sbjct: 428 PMCSSL 433
Score = 77.4 bits (189), Expect(2) = 2e-25
Identities = 39/74 (52%), Positives = 54/74 (72%)
Frame = +1
Query: 217 DPSPNDHLIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYL 396
D SP+ + +LYRR IGKL YLSFTRPDIAFAV++LS+ M P + HW A+KR+LRYL
Sbjct: 786 DGSPSAY---ATLYRRTIGKLQYLSFTRPDIAFAVNKLSRFMQSPSLEHWKAVKRVLRYL 842
Query: 397 RSTASFGVLIAKES 438
++ ++ + I+ S
Sbjct: 843 KALSTPCLQISSHS 856
Score = 64.3 bits (155), Expect(2) = 2e-25
Identities = 31/66 (46%), Positives = 48/66 (72%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V Y+I +L+ +FSLK+LG L+Y LG+EV G++LSQ +Y +++L V M + KGV+T
Sbjct: 715 VTYVINSLAYKFSLKNLGELNYLLGIEVKHVPNGIVLSQSRYILEILSYVDMTDCKGVTT 774
Query: 194 PMTSTV 211
PM S++
Sbjct: 775 PMCSSL 780
Score = 77.8 bits (190), Expect(2) = 2e-25
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +1
Query: 217 DPSPNDHLIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYL 396
D SP+ D +LYRR IGKL YLSFTRPDIAFAV++LS+ M P + HW A+KR+ RYL
Sbjct: 609 DGSPS---ADATLYRRTIGKLQYLSFTRPDIAFAVNKLSRFMQSPSLEHWKAVKRVFRYL 665
Query: 397 RSTASFGVLIAKES 438
++ ++ + I+ S
Sbjct: 666 KALSTPYLQISSHS 679
Score = 63.5 bits (153), Expect(2) = 2e-25
Identities = 30/66 (45%), Positives = 48/66 (72%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V Y+I +L+ +FSLK+LG ++Y LG+EV G++LSQ +Y +++L V M + KGV+T
Sbjct: 538 VTYVINSLAYKFSLKNLGEINYLLGIEVKHVPNGIVLSQSRYILEILSYVDMTDCKGVTT 597
Query: 194 PMTSTV 211
PM S++
Sbjct: 598 PMCSSL 603
Score = 75.5 bits (184), Expect(2) = 8e-25
Identities = 34/56 (60%), Positives = 45/56 (80%)
Frame = +1
Query: 244 DGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTAS 411
D +LYR IGKL YLSFTRPDIAFAV++LS+ M P + HW A+KR+LRYL++ ++
Sbjct: 268 DATLYRCTIGKLQYLSFTRPDIAFAVNKLSRFMQSPSLEHWKAVKRVLRYLKALST 323
Score = 63.9 bits (154), Expect(2) = 8e-25
Identities = 32/68 (47%), Positives = 48/68 (70%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V Y+I +L+ +FSLK+LG L+Y LG+EV G++LSQ +Y +D+L V M + KGV+T
Sbjct: 197 VTYVINSLAYKFSLKNLGELNYLLGIEVKHVPNGIVLSQSRYILDILSYVHMTDCKGVTT 256
Query: 194 PMTSTVIL 217
P S++ L
Sbjct: 257 PTCSSLPL 264
>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
Length = 1112
Score = 73.9 bits (180), Expect(2) = 7e-26
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = +1
Query: 256 YRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFGVLIAKE 435
YR ++G L YLS TRPDIA+ V++LS+ MHQP HW A+KRLLRYL T G+ + +
Sbjct: 906 YRTMVGSLQYLSLTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHGITLRRT 965
Query: 436 S 438
S
Sbjct: 966 S 966
Score = 68.9 bits (167), Expect(2) = 7e-26
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +2
Query: 26 IEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVSTPMTS 205
I+ LS RFSLKDLGPL YFLGVEV + GL LSQ KY DLL+ M K TP+ +
Sbjct: 829 IQQLSQRFSLKDLGPLTYFLGVEVTSHTNGLFLSQHKYIADLLNRTHMTEAKPAPTPLAT 888
Query: 206 TVILT 220
+ ILT
Sbjct: 889 SPILT 893
>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
Length = 1442
Score = 81.6 bits (200), Expect(2) = 9e-26
Identities = 35/68 (51%), Positives = 51/68 (75%)
Frame = +1
Query: 241 IDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFGV 420
+D + +RR+IG L YLS TRPDI+FAV++LS+ MH+P +HW A KRLLRYL+ T G+
Sbjct: 1149 VDSTDFRRVIGSLQYLSLTRPDISFAVNKLSQFMHKPTTAHWTATKRLLRYLKQTIFHGI 1208
Query: 421 LIAKESTN 444
+ + +T+
Sbjct: 1209 QLTRNTTS 1216
Score = 60.8 bits (146), Expect(2) = 9e-26
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V +II+ L FSLKD+G +FLGVEVI + GL LSQ +Y DLL M K VST
Sbjct: 1073 VDHIIQKLGENFSLKDMGNHSFFLGVEVIPTRAGLFLSQHQYIRDLLSTTNMLGAKDVST 1132
Query: 194 PMTSTVIL 217
P+++T L
Sbjct: 1133 PLSTTASL 1140
>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
Length = 478
Score = 73.6 bits (179), Expect(2) = 9e-26
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +1
Query: 238 LIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFG 417
L D + YR ++G L YLS TRPDIA+ V++LS+ MHQP HW A+KRLLRYL T
Sbjct: 240 LSDPTEYRTVVGSLQYLSLTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHD 299
Query: 418 VLIAKES 438
+ + + S
Sbjct: 300 ITLRRTS 306
Score = 68.9 bits (167), Expect(2) = 9e-26
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +2
Query: 26 IEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVSTPMTS 205
I+ LS RFSLKDLGPL YFLGVEV + GL LSQ KY DLL+ M K TP+ +
Sbjct: 169 IQQLSQRFSLKDLGPLTYFLGVEVTSHTNGLFLSQRKYIADLLNRTHMTEAKPAPTPLAT 228
Query: 206 TVILT 220
+ ILT
Sbjct: 229 SPILT 233
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 73.2 bits (178), Expect(2) = 1e-25
Identities = 31/66 (46%), Positives = 47/66 (71%)
Frame = +1
Query: 244 DGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFGVL 423
D + YR I+G L YL+ TRPDI+F+V+++ + +H P HW A+KR+LRYL+ T+ G+
Sbjct: 1110 DATNYRSIVGALQYLTLTRPDISFSVNKVCQYLHSPTTVHWAAVKRILRYLQQTSGLGLK 1169
Query: 424 IAKEST 441
I K S+
Sbjct: 1170 IRKSSS 1175
Score = 68.9 bits (167), Expect(2) = 1e-25
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 23 IIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVSTPMT 202
+++ L+ F+LKDLG LHYFLG+E + G+LLSQEKY DLL + MD K VSTP++
Sbjct: 1034 LLQDLNKSFALKDLGELHYFLGIEATKVCDGILLSQEKYVKDLLKRINMDKCKPVSTPLS 1093
Query: 203 ST 208
T
Sbjct: 1094 PT 1095
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 72.8 bits (177), Expect(2) = 1e-25
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +1
Query: 244 DGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFGVL 423
D + YR I+G L YL+ TRPDIA++V+++ + +H P SHW+A+KR+LRYL S G+
Sbjct: 1226 DATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLH 1285
Query: 424 IAKEST 441
+ K ++
Sbjct: 1286 VHKSAS 1291
Score = 69.3 bits (168), Expect(2) = 1e-25
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +2
Query: 23 IIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVSTPMT 202
+++ L+ F+LKDLG LHYFLG+EV + S G++L+QEKY D+L V M N K VSTP++
Sbjct: 1150 LLKDLNKEFTLKDLGDLHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCKPVSTPLS 1209
Query: 203 STVILT 220
+ LT
Sbjct: 1210 VSEKLT 1215
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 72.0 bits (175), Expect(2) = 1e-25
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +1
Query: 244 DGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFGVL 423
D YR I+G L YL+ TRPDIA++V+++ + +H P SHW+A+KR+LRYL S G+
Sbjct: 1223 DAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLH 1282
Query: 424 IAKEST 441
I K ++
Sbjct: 1283 IHKSAS 1288
Score = 70.1 bits (170), Expect(2) = 1e-25
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +2
Query: 23 IIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVSTPMT 202
+++ L+ F+LKDLG LHYFLG+EV + S G++L+QEKY DLL V M N K VSTP++
Sbjct: 1147 LLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLS 1206
Query: 203 STVILT 220
+ LT
Sbjct: 1207 VSEKLT 1212
>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
gi|225898008|dbj|BAH30336.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1459
Score = 82.4 bits (202), Expect(2) = 2e-25
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = +1
Query: 238 LIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFG 417
L D S YR ++G L YL+FTRPDIAFAV+RLS+ MHQP HW A KR+LRYL T + G
Sbjct: 1232 LNDASEYRSVVGSLQYLAFTRPDIAFAVNRLSQFMHQPTSDHWQAAKRVLRYLAGTTTHG 1291
Query: 418 VLIAKES 438
+ + S
Sbjct: 1292 IFLNSSS 1298
Score = 59.3 bits (142), Expect(2) = 2e-25
Identities = 32/69 (46%), Positives = 46/69 (66%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V ++ +L+ RFS+KD LHYFLG+E R++TGL L Q KY DLL + M + K V+T
Sbjct: 1157 VSAVLSSLAERFSIKDPTDLHYFLGIEATRTNTGLHLMQRKYMTDLLAKHNMLDAKPVAT 1216
Query: 194 PMTSTVILT 220
P+ ++ LT
Sbjct: 1217 PLPTSPKLT 1225
>gb|AAT38708.1| Putative polyprotein, identical [Solanum demissum]
Length = 878
Score = 77.0 bits (188), Expect(2) = 2e-25
Identities = 39/74 (52%), Positives = 54/74 (72%)
Frame = +1
Query: 217 DPSPNDHLIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYL 396
D SP+ D +LYRR IGKL YLSFTRPDIAFAV++LS+ M P + HW A+K++LRYL
Sbjct: 701 DGSPS---ADVTLYRRTIGKLQYLSFTRPDIAFAVNKLSRFMQSPSLEHWKAVKKVLRYL 757
Query: 397 RSTASFGVLIAKES 438
++ ++ + I+ S
Sbjct: 758 KALSTPCLQISSHS 771
Score = 64.3 bits (155), Expect(2) = 2e-25
Identities = 31/66 (46%), Positives = 48/66 (72%)
Frame = +2
Query: 14 VHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVST 193
V Y+I +L+ +FSLK+LG L+Y LG+EV G++LSQ +Y +++L V M + KGV+T
Sbjct: 630 VTYVINSLAYKFSLKNLGELNYLLGIEVKHVPNGIVLSQSRYILEILSYVDMTDCKGVTT 689
Query: 194 PMTSTV 211
PM S++
Sbjct: 690 PMCSSL 695
>gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 387
Score = 79.7 bits (195), Expect(2) = 3e-25
Identities = 38/67 (56%), Positives = 46/67 (68%)
Frame = +1
Query: 238 LIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFG 417
L D YR IIG L YLSFTRPDIAF V+RLS+ MH+P HW A KR+LRYL T S G
Sbjct: 160 LDDAKEYRMIIGSLQYLSFTRPDIAFVVNRLSQFMHKPTDEHWQAAKRVLRYLAGTKSHG 219
Query: 418 VLIAKES 438
+ + ++
Sbjct: 220 IFLRSDA 226
Score = 60.8 bits (146), Expect(2) = 3e-25
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = +2
Query: 32 ALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVSTPMTST 208
+L+ RFSLKDLG L YFLG+E R+ GL L Q KY DLL + M + K +STPM +T
Sbjct: 91 SLADRFSLKDLGALSYFLGIEATRTKKGLHLMQRKYITDLLAKTHMLDAKPISTPMATT 149
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 70.5 bits (171), Expect(2) = 4e-25
Identities = 36/72 (50%), Positives = 52/72 (72%)
Frame = +2
Query: 5 Q*GVHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KG 184
Q V +++ L F+LKDLG LHYFLG+EV ++S+G++L+QEKY DLL V M + K
Sbjct: 952 QDAVPALLKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKP 1011
Query: 185 VSTPMTSTVILT 220
VSTP++++ LT
Sbjct: 1012 VSTPLSTSEKLT 1023
Score = 69.7 bits (169), Expect(2) = 4e-25
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +1
Query: 244 DGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFGVL 423
D S YR ++G L YL+ TRPDI F V+++ + +H P + HW A+KR+LRYL+ G+
Sbjct: 1034 DASNYRSVVGALQYLTLTRPDIYFPVNKVCQFLHAPTIVHWAAMKRILRYLKQCTKLGLK 1093
Query: 424 IAKEST 441
I+K +
Sbjct: 1094 ISKSKS 1099
>emb|CAN69370.1| hypothetical protein VITISV_010057 [Vitis vinifera]
Length = 591
Score = 72.0 bits (175), Expect(2) = 4e-25
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +1
Query: 256 YRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFGVLIAKE 435
YR ++G L YLS TRPDIA+ V++LS+ MHQP HW A+KRLLRYL T + + +
Sbjct: 359 YRTVVGSLQYLSLTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHDITLRRT 418
Query: 436 S 438
S
Sbjct: 419 S 419
Score = 68.2 bits (165), Expect(2) = 4e-25
Identities = 36/65 (55%), Positives = 43/65 (66%)
Frame = +2
Query: 26 IEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVSTPMTS 205
I+ LS RFSLKDLGPL YFLGVEV + GL L+Q KY DLL+ M K TP+ +
Sbjct: 282 IQQLSQRFSLKDLGPLIYFLGVEVTSHTNGLFLNQRKYIADLLNRTHMTEAKSAPTPLAT 341
Query: 206 TVILT 220
+ ILT
Sbjct: 342 SPILT 346
>ref|WP_003830793.1| reverse transcriptase family protein, partial [Bifidobacterium
breve] gi|291380553|gb|EFE88071.1| reverse transcriptase
(RNA-dependent DNA polymerase), partial [Bifidobacterium
breve DSM 20213 = JCM 1192]
Length = 153
Score = 71.6 bits (174), Expect(2) = 5e-25
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = +2
Query: 23 IIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*KGVSTPMT 202
+++ L F LKDLG LHYFLG+EV +S GL+LSQEKY D++ M N K VSTP++
Sbjct: 18 LLKDLEREFELKDLGDLHYFLGIEVKKSGDGLILSQEKYARDIIKRTNMSNSKSVSTPLS 77
Query: 203 ST 208
ST
Sbjct: 78 ST 79
Score = 68.6 bits (166), Expect(2) = 5e-25
Identities = 28/54 (51%), Positives = 41/54 (75%)
Frame = +1
Query: 244 DGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRST 405
D + YR ++G L YL+ TRPDI+FAV+++ + +H P SHW ALKR+LRY++ T
Sbjct: 94 DSTNYRSVVGALQYLTLTRPDISFAVNKMCQFLHSPTTSHWSALKRILRYVQGT 147
>emb|CAN71273.1| hypothetical protein VITISV_019661 [Vitis vinifera]
Length = 1276
Score = 70.5 bits (171), Expect(2) = 6e-25
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = +1
Query: 220 PSPNDHLIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLR 399
P + L D YRR++GKL+YL+ TRPDI F VS +S+ + P SHW A+ R+LRY++
Sbjct: 606 PGQGEPLGDPGKYRRLVGKLNYLTITRPDIYFPVSVVSQFLQSPCDSHWDAIIRILRYIK 665
Query: 400 STASFGVL 423
ST GVL
Sbjct: 666 STPGQGVL 673
Score = 69.3 bits (168), Expect(2) = 6e-25
Identities = 35/74 (47%), Positives = 48/74 (64%)
Frame = +2
Query: 2 NQ*GVHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*K 181
+Q G+H + + L F KDLG L YFLG+E+ +SS+G++LSQ KY +D+L E M + K
Sbjct: 533 DQNGIHKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCK 592
Query: 182 GVSTPMTSTVILTP 223
V TPM V L P
Sbjct: 593 PVDTPMDPNVKLIP 606
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +1
Query: 256 YRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLRSTASFGVLIAK 432
Y+ ++GKL YLS TR +I FA+ R+S+ +H P H + R+LRYL++T S G+ K
Sbjct: 861 YKHLVGKLIYLSHTRSNITFAIGRVSQHVHWPAKDHMDEVYRILRYLKTTPSKGLFSRK 919
>emb|CAN63730.1| hypothetical protein VITISV_030286 [Vitis vinifera]
Length = 1205
Score = 72.8 bits (177), Expect(2) = 8e-25
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +1
Query: 220 PSPNDHLIDGSLYRRIIGKLHYLSFTRPDIAFAVSRLSKAMHQPLMSHWVALKRLLRYLR 399
P + L D YRR++GKL+YL+ TRPDI+F VS +S+ + P SHW A+ R+LRY++
Sbjct: 971 PGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIK 1030
Query: 400 STASFGVL 423
ST S GVL
Sbjct: 1031 STPSQGVL 1038
Score = 66.6 bits (161), Expect(2) = 8e-25
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = +2
Query: 2 NQ*GVHYIIEALS*RFSLKDLGPLHYFLGVEVIRSSTGLLLSQEKYTMDLLHEVAMDN*K 181
+Q G+ + + L F KDLG L YFLG+E+ +SS+G++LSQ KY +D+L E M + K
Sbjct: 898 DQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCK 957
Query: 182 GVSTPMTSTVILTP 223
V TPM V L P
Sbjct: 958 PVDTPMDPNVKLVP 971