BLASTX nr result

ID: Atropa21_contig00023284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00023284
         (703 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250489.1| PREDICTED: F-box protein At3g07870-like [Sol...    68   5e-12

>ref|XP_004250489.1| PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
          Length = 421

 Score = 68.2 bits (165), Expect(2) = 5e-12
 Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
 Frame = -2

Query: 621 KIHSPTS-NSLPY-VSPAIVNGAVHLLVGKDLEKPDTPPCAKGILVFKMDKEVISTMPYP 448
           KIHS  S N LP   +P +VNGA+H +   DL++    PC  GI+VF+MDKE + TMP+P
Sbjct: 221 KIHSSISFNFLPNSFNPVVVNGALHWITLHDLKRKGVAPCENGIMVFRMDKEELFTMPHP 280

Query: 447 --GSVCNSWKTHHTISLLLKEESL 382
               VC S + H  + L++K++ L
Sbjct: 281 PVSKVCKSNQDHLAMKLMVKDDHL 304



 Score = 29.3 bits (64), Expect(2) = 5e-12
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -1

Query: 346 DIWILEDYETCV*TKRCKVNLV 281
           D+W LEDYET    KR K+NL+
Sbjct: 317 DMWWLEDYETRSWIKRYKINLL 338


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