BLASTX nr result
ID: Atropa21_contig00023167
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00023167
(437 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349032.1| PREDICTED: DNA ligase 1-like [Solanum tubero... 169 4e-40
ref|XP_004250982.1| PREDICTED: DNA ligase 1-like [Solanum lycope... 168 6e-40
gb|EPS73222.1| hypothetical protein M569_01532 [Genlisea aurea] 81 1e-13
gb|EOY34499.1| DNA ligase 1 isoform 5 [Theobroma cacao] 67 2e-09
gb|EOY34498.1| DNA ligase 1 isoform 4, partial [Theobroma cacao] 67 2e-09
gb|EOY34497.1| DNA ligase 1 isoform 3 [Theobroma cacao] 67 2e-09
gb|EOY34496.1| DNA ligase 1 isoform 2 [Theobroma cacao] 67 2e-09
gb|EOY34495.1| DNA ligase 1 isoform 1 [Theobroma cacao] 67 2e-09
ref|XP_002464455.1| hypothetical protein SORBIDRAFT_01g018700 [S... 67 2e-09
gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japo... 67 3e-09
ref|NP_001064917.1| Os10g0489200 [Oryza sativa Japonica Group] g... 67 3e-09
ref|XP_006662464.1| PREDICTED: DNA ligase 1-like [Oryza brachyan... 66 4e-09
ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera] gi|... 64 2e-08
gb|ESW20865.1| hypothetical protein PHAVU_005G021200g [Phaseolus... 63 4e-08
ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium d... 63 5e-08
ref|XP_006837932.1| hypothetical protein AMTR_s00102p00018040 [A... 62 8e-08
tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays] 62 8e-08
ref|XP_006417724.1| hypothetical protein EUTSA_v10006843mg [Eutr... 61 1e-07
gb|AAF18258.1|AC011438_20 T23G18.1 [Arabidopsis thaliana] 61 1e-07
gb|AAF79833.1|AC026875_13 T6D22.23 [Arabidopsis thaliana] 61 1e-07
>ref|XP_006349032.1| PREDICTED: DNA ligase 1-like [Solanum tuberosum]
Length = 802
Score = 169 bits (428), Expect = 4e-40
Identities = 89/130 (68%), Positives = 104/130 (80%)
Frame = -3
Query: 390 SKSKTPIGNQDSILKPIEDTLLVSVSKSEDLVKKRKTPDAETSSKTHIGNQDSVLKPIED 211
+ SK+P+ NQDS+L PI+DT LV+ SKSE++V K++ NQDS+LKPIED
Sbjct: 91 TSSKSPVVNQDSVLMPIKDTHLVNESKSEEVVVKKR-------------NQDSILKPIED 137
Query: 210 THLVKGSKSEELGMVKKRKMISPDESILEIKKKAANFDPRKAAYWGDGERVPFMFVAKAL 31
THLV SKSEE +VKKRKMISPDESI+EIKKKAANFDP+KA YWGDG+RVPFMFV KA
Sbjct: 138 THLVNESKSEEC-VVKKRKMISPDESIVEIKKKAANFDPKKAVYWGDGQRVPFMFVVKAF 196
Query: 30 DAISKESGRI 1
DAISKESGRI
Sbjct: 197 DAISKESGRI 206
>ref|XP_004250982.1| PREDICTED: DNA ligase 1-like [Solanum lycopersicum]
Length = 802
Score = 168 bits (426), Expect = 6e-40
Identities = 93/131 (70%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Frame = -3
Query: 390 SKSKTPIGNQDSILKPIEDTLLVSVSKSEDL-VKKRKTPDAETSSKTHIGNQDSVLKPIE 214
+ SK+P+ NQDS+LKPI+DT LV+ SKSE+L VKKR +QDS LKPIE
Sbjct: 91 TSSKSPVVNQDSVLKPIKDTDLVNESKSEELEVKKR--------------SQDSTLKPIE 136
Query: 213 DTHLVKGSKSEELGMVKKRKMISPDESILEIKKKAANFDPRKAAYWGDGERVPFMFVAKA 34
DTHLV SKSEE +VKKRKMISPDESI+EIKKKAANFDPRKA YWGDG+RVPFMFV KA
Sbjct: 137 DTHLVNESKSEEC-VVKKRKMISPDESIVEIKKKAANFDPRKAVYWGDGQRVPFMFVVKA 195
Query: 33 LDAISKESGRI 1
DAISKESGRI
Sbjct: 196 FDAISKESGRI 206
>gb|EPS73222.1| hypothetical protein M569_01532 [Genlisea aurea]
Length = 799
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/76 (55%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -3
Query: 225 KPIEDTHLVKGSKSEELGMVKKRKM-ISPDESILEIKKKAANFDPRKAAYWGDGERVPFM 49
KP+ D ++ G VKKR++ I+PDES+ +K KAA+F+ KAAYWG GERVPF+
Sbjct: 118 KPVNDL-----DSNQHSGAVKKRRLSITPDESMEALKNKAAHFNVAKAAYWGKGERVPFL 172
Query: 48 FVAKALDAISKESGRI 1
F+ K DAISKESGRI
Sbjct: 173 FLVKMFDAISKESGRI 188
>gb|EOY34499.1| DNA ligase 1 isoform 5 [Theobroma cacao]
Length = 734
Score = 67.4 bits (163), Expect = 2e-09
Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 23/128 (17%)
Frame = -3
Query: 315 SKSEDLVKKRKTPDA---ETSSKTHIGNQDS-------------VLKPIEDTHLVKGSKS 184
S S KKRK+ D+ +T S QDS + KPIED+ ++
Sbjct: 77 SSSSSPTKKRKSLDSSPSKTQSPNSTKTQDSTEVKPDQESDINGIEKPIEDSPKPNVDET 136
Query: 183 EELGMVKKRKMISPDESILEIK-------KKAANFDPRKAAYWGDGERVPFMFVAKALDA 25
++ KK K++S E E+K KK A+FDP+ A W GERVPF+F++ A D
Sbjct: 137 QKPPDSKKMKVVSVSERNAELKGKIGSLKKKPADFDPKMVACWEKGERVPFLFLSLAFDL 196
Query: 24 ISKESGRI 1
IS E+GRI
Sbjct: 197 ISNETGRI 204
>gb|EOY34498.1| DNA ligase 1 isoform 4, partial [Theobroma cacao]
Length = 734
Score = 67.4 bits (163), Expect = 2e-09
Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 23/128 (17%)
Frame = -3
Query: 315 SKSEDLVKKRKTPDA---ETSSKTHIGNQDS-------------VLKPIEDTHLVKGSKS 184
S S KKRK+ D+ +T S QDS + KPIED+ ++
Sbjct: 77 SSSSSPTKKRKSLDSSPSKTQSPNSTKTQDSTEVKPDQESDINGIEKPIEDSPKPNVDET 136
Query: 183 EELGMVKKRKMISPDESILEIK-------KKAANFDPRKAAYWGDGERVPFMFVAKALDA 25
++ KK K++S E E+K KK A+FDP+ A W GERVPF+F++ A D
Sbjct: 137 QKPPDSKKMKVVSVSERNAELKGKIGSLKKKPADFDPKMVACWEKGERVPFLFLSLAFDL 196
Query: 24 ISKESGRI 1
IS E+GRI
Sbjct: 197 ISNETGRI 204
>gb|EOY34497.1| DNA ligase 1 isoform 3 [Theobroma cacao]
Length = 782
Score = 67.4 bits (163), Expect = 2e-09
Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 23/128 (17%)
Frame = -3
Query: 315 SKSEDLVKKRKTPDA---ETSSKTHIGNQDS-------------VLKPIEDTHLVKGSKS 184
S S KKRK+ D+ +T S QDS + KPIED+ ++
Sbjct: 77 SSSSSPTKKRKSLDSSPSKTQSPNSTKTQDSTEVKPDQESDINGIEKPIEDSPKPNVDET 136
Query: 183 EELGMVKKRKMISPDESILEIK-------KKAANFDPRKAAYWGDGERVPFMFVAKALDA 25
++ KK K++S E E+K KK A+FDP+ A W GERVPF+F++ A D
Sbjct: 137 QKPPDSKKMKVVSVSERNAELKGKIGSLKKKPADFDPKMVACWEKGERVPFLFLSLAFDL 196
Query: 24 ISKESGRI 1
IS E+GRI
Sbjct: 197 ISNETGRI 204
>gb|EOY34496.1| DNA ligase 1 isoform 2 [Theobroma cacao]
Length = 683
Score = 67.4 bits (163), Expect = 2e-09
Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 23/128 (17%)
Frame = -3
Query: 315 SKSEDLVKKRKTPDA---ETSSKTHIGNQDS-------------VLKPIEDTHLVKGSKS 184
S S KKRK+ D+ +T S QDS + KPIED+ ++
Sbjct: 77 SSSSSPTKKRKSLDSSPSKTQSPNSTKTQDSTEVKPDQESDINGIEKPIEDSPKPNVDET 136
Query: 183 EELGMVKKRKMISPDESILEIK-------KKAANFDPRKAAYWGDGERVPFMFVAKALDA 25
++ KK K++S E E+K KK A+FDP+ A W GERVPF+F++ A D
Sbjct: 137 QKPPDSKKMKVVSVSERNAELKGKIGSLKKKPADFDPKMVACWEKGERVPFLFLSLAFDL 196
Query: 24 ISKESGRI 1
IS E+GRI
Sbjct: 197 ISNETGRI 204
>gb|EOY34495.1| DNA ligase 1 isoform 1 [Theobroma cacao]
Length = 800
Score = 67.4 bits (163), Expect = 2e-09
Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 23/128 (17%)
Frame = -3
Query: 315 SKSEDLVKKRKTPDA---ETSSKTHIGNQDS-------------VLKPIEDTHLVKGSKS 184
S S KKRK+ D+ +T S QDS + KPIED+ ++
Sbjct: 77 SSSSSPTKKRKSLDSSPSKTQSPNSTKTQDSTEVKPDQESDINGIEKPIEDSPKPNVDET 136
Query: 183 EELGMVKKRKMISPDESILEIK-------KKAANFDPRKAAYWGDGERVPFMFVAKALDA 25
++ KK K++S E E+K KK A+FDP+ A W GERVPF+F++ A D
Sbjct: 137 QKPPDSKKMKVVSVSERNAELKGKIGSLKKKPADFDPKMVACWEKGERVPFLFLSLAFDL 196
Query: 24 ISKESGRI 1
IS E+GRI
Sbjct: 197 ISNETGRI 204
>ref|XP_002464455.1| hypothetical protein SORBIDRAFT_01g018700 [Sorghum bicolor]
gi|241918309|gb|EER91453.1| hypothetical protein
SORBIDRAFT_01g018700 [Sorghum bicolor]
Length = 905
Score = 67.4 bits (163), Expect = 2e-09
Identities = 42/98 (42%), Positives = 53/98 (54%)
Frame = -3
Query: 294 KKRKTPDAETSSKTHIGNQDSVLKPIEDTHLVKGSKSEELGMVKKRKMISPDESILEIKK 115
KK KT D++ S+KT N P + K+EE + LE+KK
Sbjct: 253 KKAKTTDSD-SAKTEEKNTTRATSP-KKAKTTDSRKAEE------------KNTTLELKK 298
Query: 114 KAANFDPRKAAYWGDGERVPFMFVAKALDAISKESGRI 1
K + FDP AAYW GE VPF+F+A+ALD IS ESGRI
Sbjct: 299 KGSEFDPMAAAYWKPGEPVPFLFLARALDLISNESGRI 336
>gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japonica Group]
gi|31432783|gb|AAP54376.1| DNA ligase, putative,
expressed [Oryza sativa Japonica Group]
gi|40539108|gb|AAR87364.1| putative DNA ligase [Oryza
sativa Japonica Group]
Length = 810
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Frame = -3
Query: 315 SKSEDLVKKRKTPDAETSSKTHIGNQDSVLKPI--EDTHLVKGSKSEELGMVKKRKMISP 142
S +E + K+++ + T +K + KP + T + KSEE
Sbjct: 120 SSAEGVEKEKRRSPSPTKAKALASESQDIKKPSSPKKTKALDAPKSEE------------ 167
Query: 141 DESILEIKKKAANFDPRKAAYWGDGERVPFMFVAKALDAISKESGRI 1
++ LE+KKK + F+P AAYW E VPF+F+A+ALD IS ESGRI
Sbjct: 168 KDTTLELKKKGSEFNPMAAAYWSPEEPVPFLFLARALDLISNESGRI 214
>ref|NP_001064917.1| Os10g0489200 [Oryza sativa Japonica Group]
gi|113639526|dbj|BAF26831.1| Os10g0489200 [Oryza sativa
Japonica Group]
Length = 828
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Frame = -3
Query: 315 SKSEDLVKKRKTPDAETSSKTHIGNQDSVLKPI--EDTHLVKGSKSEELGMVKKRKMISP 142
S +E + K+++ + T +K + KP + T + KSEE
Sbjct: 226 SSAEGVEKEKRRSPSPTKAKALASESQDIKKPSSPKKTKALDAPKSEE------------ 273
Query: 141 DESILEIKKKAANFDPRKAAYWGDGERVPFMFVAKALDAISKESGRI 1
++ LE+KKK + F+P AAYW E VPF+F+A+ALD IS ESGRI
Sbjct: 274 KDTTLELKKKGSEFNPMAAAYWSPEEPVPFLFLARALDLISNESGRI 320
>ref|XP_006662464.1| PREDICTED: DNA ligase 1-like [Oryza brachyantha]
Length = 783
Score = 66.2 bits (160), Expect = 4e-09
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
Frame = -3
Query: 297 VKKRKTPDAETSSKTHIGNQDSVLKPIEDTHLVKGSKSEEL---GMVKKRKMISPDES-- 133
V+ +K+P A+ S SV D + + S+S++ KK K + +S
Sbjct: 84 VEGKKSPSAKRSPSPT--RSKSVAANPSDEAVAQASESKDKRRPSSPKKTKTMDAPKSEE 141
Query: 132 ---ILEIKKKAANFDPRKAAYWGDGERVPFMFVAKALDAISKESGRI 1
LE+KKK + FDP AAYW GE VPF+F+A+ALD IS ESGRI
Sbjct: 142 RDTTLELKKKGSEFDPMAAAYWKPGEPVPFLFLARALDLISNESGRI 188
>ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera]
gi|297734904|emb|CBI17138.3| unnamed protein product
[Vitis vinifera]
Length = 723
Score = 64.3 bits (155), Expect = 2e-08
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Frame = -3
Query: 294 KKRKT----PD-AETSSKTHIGNQDSVLKPIEDTHLVKGSKSEELGMVKKRKMISPDESI 130
KKRKT PD A T+ DS ++P++ KK K + +E I
Sbjct: 37 KKRKTQTQTPDLAPPKKSTNSQTPDSKIEPLDALP------------AKKPKKVDVEECI 84
Query: 129 LEIKKKAANFDPRKAAYWGDGERVPFMFVAKALDAISKESGRI 1
+++KKAA+F+P+ AAYW D + VPF+F+ +A D ISKE+GRI
Sbjct: 85 GQLRKKAADFNPKTAAYWED-KPVPFLFLVRAFDMISKETGRI 126
>gb|ESW20865.1| hypothetical protein PHAVU_005G021200g [Phaseolus vulgaris]
Length = 446
Score = 63.2 bits (152), Expect = 4e-08
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Frame = -3
Query: 423 KPIEDTDLVTGSKSKTPIGNQDSILKPIEDTLLVSVSK-----SEDLVKKRKTPDAETSS 259
KP D + + ++S KP L S+ K S + KKRK+P + TSS
Sbjct: 3 KPPSALDFLMSVAAAAAAVKKNSQSKPQTPKLSSSLKKRKSPNSTSVAKKRKSPHS-TSS 61
Query: 258 KTHIGNQDSVLKPIEDTHLVKGSKSEELGMVKKRKMISPDESILEIKKKAANFDPRKAAY 79
+ + VLKP E + K+EE VK +++ ++ + ++++K ++FDP
Sbjct: 62 QNPTVKPEQVLKPKEVLKPEEVLKAEEA--VKAEEVVEMEKQVQQLRQKPSSFDPASVTA 119
Query: 78 WGDGERVPFMFVAKALDAISKESGR 4
W G+ VPF+F+A A D I +E+ +
Sbjct: 120 WEKGQPVPFLFLALAFDMIDEETSK 144
>ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium distachyon]
Length = 918
Score = 62.8 bits (151), Expect = 5e-08
Identities = 45/127 (35%), Positives = 66/127 (51%)
Frame = -3
Query: 381 KTPIGNQDSILKPIEDTLLVSVSKSEDLVKKRKTPDAETSSKTHIGNQDSVLKPIEDTHL 202
KT D+ L +D LL S+S++ K+++T + T +K + +P
Sbjct: 212 KTLAAKSDAKLS--DDALL---SQSDE--KQKRTSPSPTKAKGQASQSEDKTRPSSP--- 261
Query: 201 VKGSKSEELGMVKKRKMISPDESILEIKKKAANFDPRKAAYWGDGERVPFMFVAKALDAI 22
K SK+ ++R + E+KKK + FDP AAYW E VPF+F+A+ALD I
Sbjct: 262 -KKSKTSNATKSEERN------TTFELKKKGSEFDPMAAAYWKPTEPVPFLFLAQALDLI 314
Query: 21 SKESGRI 1
S ESGRI
Sbjct: 315 SNESGRI 321
>ref|XP_006837932.1| hypothetical protein AMTR_s00102p00018040 [Amborella trichopoda]
gi|548840347|gb|ERN00501.1| hypothetical protein
AMTR_s00102p00018040 [Amborella trichopoda]
Length = 696
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/116 (34%), Positives = 61/116 (52%)
Frame = -3
Query: 348 KPIEDTLLVSVSKSEDLVKKRKTPDAETSSKTHIGNQDSVLKPIEDTHLVKGSKSEELGM 169
+ I D L+ ++D KK + P T+ IE+ SK +E +
Sbjct: 4 RTINDVLMAGARAAKD--KKGRPPLKHTA--------------IENAKKEVASKEQEPSV 47
Query: 168 VKKRKMISPDESILEIKKKAANFDPRKAAYWGDGERVPFMFVAKALDAISKESGRI 1
+ + + D+ I E+ KKA +F P +AA+W GERVPF+ +A+ALD I+ ESGRI
Sbjct: 48 --ETEEFNLDDKISELLKKAIDFKPERAAFWKSGERVPFILLARALDLIANESGRI 101
>tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays]
Length = 909
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -3
Query: 129 LEIKKKAANFDPRKAAYWGDGERVPFMFVAKALDAISKESGRI 1
LE+KKK + FDP AYW GE VPF+F+A+ALD IS ESGRI
Sbjct: 272 LELKKKGSEFDPMAVAYWKPGEPVPFLFLARALDLISNESGRI 314
>ref|XP_006417724.1| hypothetical protein EUTSA_v10006843mg [Eutrema salsugineum]
gi|557095495|gb|ESQ36077.1| hypothetical protein
EUTSA_v10006843mg [Eutrema salsugineum]
Length = 790
Score = 61.2 bits (147), Expect = 1e-07
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Frame = -3
Query: 285 KTPDAETSSKTHIGNQDSVLKPIEDT-HLVKGSKSEELGMVKKRKMISPDESILEIK--- 118
KTP E ++ +G +P DT V+ SK+ KK +++S I E+K
Sbjct: 96 KTPVPECKTENPVGPISDSAEPRSDTPSTVEDSKNG----AKKSRVLSQTGKIDELKSKI 151
Query: 117 ----KKAANFDPRKAAYWGDGERVPFMFVAKALDAISKESGRI 1
KK +F+P K + W GERVPF+F+A A D IS ESGRI
Sbjct: 152 GLLKKKPGDFNPEKVSCWEKGERVPFLFIALAFDLISAESGRI 194
>gb|AAF18258.1|AC011438_20 T23G18.1 [Arabidopsis thaliana]
Length = 794
Score = 61.2 bits (147), Expect = 1e-07
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Frame = -3
Query: 321 SVSKSEDLVKKRKTPDAETS----SKTHIGNQDSVLKPIEDTHLVKGSKSE-----ELGM 169
++S+S + K +T DA S+ + + +L+P+ D+ + S + G
Sbjct: 76 NLSRSPNKRKIGETQDANLGKTIVSEGTLPKTEDLLEPVSDSANPRSDTSSIAEDSKTGA 135
Query: 168 VKKRKMISPDESILEI---KKKAANFDPRKAAYWGDGERVPFMFVAKALDAISKESGRI 1
K + + DE +I KKK +FDP K + W GERVPF+FVA A D IS ESGRI
Sbjct: 136 KKAKTLSKTDEMKSKIGLLKKKPNDFDPEKMSCWEKGERVPFLFVALAFDLISNESGRI 194
>gb|AAF79833.1|AC026875_13 T6D22.23 [Arabidopsis thaliana]
Length = 839
Score = 61.2 bits (147), Expect = 1e-07
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Frame = -3
Query: 321 SVSKSEDLVKKRKTPDAETS----SKTHIGNQDSVLKPIEDTHLVKGSKSE-----ELGM 169
++S+S + K +T DA S+ + + +L+P+ D+ + S + G
Sbjct: 76 NLSRSPNKRKIGETQDANLGKTIVSEGTLPKTEDLLEPVSDSANPRSDTSSIAEDSKTGA 135
Query: 168 VKKRKMISPDESILEI---KKKAANFDPRKAAYWGDGERVPFMFVAKALDAISKESGRI 1
K + + DE +I KKK +FDP K + W GERVPF+FVA A D IS ESGRI
Sbjct: 136 KKAKTLSKTDEMKSKIGLLKKKPNDFDPEKMSCWEKGERVPFLFVALAFDLISNESGRI 194