BLASTX nr result

ID: Atropa21_contig00023096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00023096
         (485 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354152.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   122   5e-26
ref|XP_004228610.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   121   1e-25

>ref|XP_006354152.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 11-like isoform X1
           [Solanum tuberosum] gi|565375265|ref|XP_006354153.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 11-like
           isoform X2 [Solanum tuberosum]
          Length = 604

 Score =  122 bits (306), Expect = 5e-26
 Identities = 60/77 (77%), Positives = 63/77 (81%)
 Frame = -1

Query: 299 MPMSWADSVPAAENPAGALAKSAYVPPHLRNRPSTDPPXXXXXXXXXXALGNNDHSGYGV 120
           M MSWADSV AAENPAGA +KSAYVPPHLRNRPSTDPP          +LG NDHSGYGV
Sbjct: 1   MSMSWADSVSAAENPAGAPSKSAYVPPHLRNRPSTDPPAQASYAGAAASLG-NDHSGYGV 59

Query: 119 PNVVGNRWSGQRNEYQS 69
           PNVVG+RWSGQRNEYQS
Sbjct: 60  PNVVGSRWSGQRNEYQS 76


>ref|XP_004228610.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like isoform 1
           [Solanum lycopersicum] gi|460365443|ref|XP_004228611.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like
           isoform 2 [Solanum lycopersicum]
          Length = 604

 Score =  121 bits (303), Expect = 1e-25
 Identities = 59/77 (76%), Positives = 63/77 (81%)
 Frame = -1

Query: 299 MPMSWADSVPAAENPAGALAKSAYVPPHLRNRPSTDPPXXXXXXXXXXALGNNDHSGYGV 120
           M MSWADSV AAENPAGA +KSAYVPPHLRNRPSTDPP          +LG NDHSGYGV
Sbjct: 1   MSMSWADSVSAAENPAGAPSKSAYVPPHLRNRPSTDPPAQASYAGAAASLG-NDHSGYGV 59

Query: 119 PNVVGNRWSGQRNEYQS 69
           PN+VG+RWSGQRNEYQS
Sbjct: 60  PNMVGSRWSGQRNEYQS 76


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