BLASTX nr result
ID: Atropa21_contig00023008
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00023008
(528 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group] 93 1e-31
emb|CAE05417.1| OSJNBa0035I04.5 [Oryza sativa Japonica Group] gi... 93 1e-31
ref|XP_002457888.1| hypothetical protein SORBIDRAFT_03g018841 [S... 83 3e-30
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 87 2e-27
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 85 1e-26
emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera] 87 3e-25
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera] 85 1e-24
ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [S... 74 1e-24
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 86 1e-24
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 76 1e-23
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 86 2e-23
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 80 4e-23
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 80 7e-23
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] 80 7e-23
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 84 9e-23
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 74 9e-23
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 77 1e-22
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 77 1e-22
emb|CAN69753.1| hypothetical protein VITISV_024937 [Vitis vinifera] 82 1e-22
emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera] 80 2e-22
>emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]
Length = 1455
Score = 92.8 bits (229), Expect(2) = 1e-31
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +2
Query: 47 SAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQS 226
S P+TS QN K+E IRT+NN I LL A +PP +W L+T TYLLN + S+
Sbjct: 678 SCPYTSPQNGKAERMIRTLNNSIRTLLLQASMPPSYWAEGLATATYLLNRRPSSSVNNSI 737
Query: 227 PTQILYRRDPSYSHLRTFGCLCYPPL 304
P Q+L+R+ P+YS LR FGCLCYP L
Sbjct: 738 PFQLLHRKIPNYSMLRVFGCLCYPNL 763
Score = 69.3 bits (168), Expect(2) = 1e-31
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = +1
Query: 295 PPTPSTKIHKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFA 462
P +T HKL P S CVFL YPS H+GY C N+S+R+II+ H+IFDE+QF F+
Sbjct: 761 PNLSATAAHKLAPYSAACVFLGYPSSHKGYCCLNISTRRIIISCHVIFDETQFPFS 816
>emb|CAE05417.1| OSJNBa0035I04.5 [Oryza sativa Japonica Group]
gi|38605921|emb|CAE05956.3| OSJNBb0088C09.15 [Oryza
sativa Japonica Group]
Length = 1246
Score = 92.8 bits (229), Expect(2) = 1e-31
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +2
Query: 47 SAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQS 226
S P+TS QN K+E IRT+NN I LL A +PP +W L+T TYLLN + S+
Sbjct: 469 SCPYTSPQNGKAERMIRTLNNSIRTLLLQASMPPSYWAEGLATATYLLNRRPSSSVNNSI 528
Query: 227 PTQILYRRDPSYSHLRTFGCLCYPPL 304
P Q+L+R+ P+YS LR FGCLCYP L
Sbjct: 529 PFQLLHRKIPNYSMLRVFGCLCYPNL 554
Score = 69.3 bits (168), Expect(2) = 1e-31
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = +1
Query: 295 PPTPSTKIHKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFA 462
P +T HKL P S CVFL YPS H+GY C N+S+R+II+ H+IFDE+QF F+
Sbjct: 552 PNLSATAAHKLAPYSAACVFLGYPSSHKGYCCLNISTRRIIISCHVIFDETQFPFS 607
>ref|XP_002457888.1| hypothetical protein SORBIDRAFT_03g018841 [Sorghum bicolor]
gi|241929863|gb|EES03008.1| hypothetical protein
SORBIDRAFT_03g018841 [Sorghum bicolor]
Length = 787
Score = 82.8 bits (203), Expect(2) = 3e-30
Identities = 42/86 (48%), Positives = 53/86 (61%)
Frame = +2
Query: 47 SAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQS 226
S P+TS QN K+E +RT N I +L HA +PP +W LST T+LLN + S++ Q
Sbjct: 127 SCPYTSPQNSKAERMLRTTNTTIRTMLLHASMPPPYWAKGLSTATFLLNRRPSSSIRNQI 186
Query: 227 PTQILYRRDPSYSHLRTFGCLCYPPL 304
QIL+ P YS LR FGCL YP L
Sbjct: 187 HHQILHGTLPDYSSLRVFGCLYYPNL 212
Score = 74.7 bits (182), Expect(2) = 3e-30
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +1
Query: 295 PPTPSTKIHKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHS 474
P +T HKL PRS PCVFL YPS H+GY C ++++ +II+ RH+IF+ES F F+ S
Sbjct: 210 PNLTATTPHKLAPRSAPCVFLGYPSSHKGYRCVDMATHRIIISRHVIFNESVFPFSATPS 269
Query: 475 PSPVS 489
P+ +S
Sbjct: 270 PASMS 274
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 87.4 bits (215), Expect(2) = 2e-27
Identities = 43/95 (45%), Positives = 58/95 (61%)
Frame = +2
Query: 14 FVPEMLLFFIFSAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLN 193
F+ E + FS P+ S QN + E K R + ALL HA +P +FW+YA T T+L+N
Sbjct: 571 FLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLIN 630
Query: 194 ILSNKSLQYQSPTQILYRRDPSYSHLRTFGCLCYP 298
+ +K LQ SP L++R+P Y LR FGCLCYP
Sbjct: 631 RMPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYP 665
Score = 60.5 bits (145), Expect(2) = 2e-27
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHSPSP 483
HKLQ RS+ CVFL Y HH+GY C + + ++ + H++FDE+QF FA+ S SP
Sbjct: 673 HKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISSSP 727
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 85.1 bits (209), Expect(2) = 1e-26
Identities = 42/95 (44%), Positives = 57/95 (60%)
Frame = +2
Query: 14 FVPEMLLFFIFSAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLN 193
F+ E + FS P+ S QN + E K R + ALL HA +P +FW+YA T T+L+N
Sbjct: 621 FLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLIN 680
Query: 194 ILSNKSLQYQSPTQILYRRDPSYSHLRTFGCLCYP 298
+ +K L SP L++R+P Y LR FGCLCYP
Sbjct: 681 RMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYP 715
Score = 60.5 bits (145), Expect(2) = 1e-26
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHSPSP 483
HKLQ RS+ CVFL Y HH+GY C + + ++ + H++FDE+QF FA+ S SP
Sbjct: 723 HKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISSSP 777
>emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]
Length = 1319
Score = 86.7 bits (213), Expect(2) = 3e-25
Identities = 42/95 (44%), Positives = 58/95 (61%)
Frame = +2
Query: 14 FVPEMLLFFIFSAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLN 193
F+ + +F FS P+ S QN + E K R + ALL HA +P +FW YA T T+L+N
Sbjct: 564 FLQQTGIFHRFSCPYNSAQNGRVERKHRHVVETGLALLAHASLPMEFWQYAFQTATFLIN 623
Query: 194 ILSNKSLQYQSPTQILYRRDPSYSHLRTFGCLCYP 298
+ +K LQ SP L+++ P+Y LR FGCLCYP
Sbjct: 624 RMPSKVLQNNSPYFTLFQKVPNYKSLRVFGCLCYP 658
Score = 53.9 bits (128), Expect(2) = 3e-25
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHSPSP 483
HKLQ RS+ +FL Y H++G+ C + + ++ + H++FDE QF AK H SP
Sbjct: 666 HKLQYRSVQSLFLGYSLHNKGFLCLDFLTGRVYITPHVVFDEGQFPLAKTHPLSP 720
>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
Length = 1198
Score = 85.1 bits (209), Expect(2) = 1e-24
Identities = 41/95 (43%), Positives = 57/95 (60%)
Frame = +2
Query: 14 FVPEMLLFFIFSAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLN 193
F+ + +F FS P+ S QN++ E K R + ALL HA +P +FW YA T T+L+N
Sbjct: 530 FLQQTGIFHRFSCPYNSAQNERVERKHRHVVETGLALLAHASLPMEFWQYAFQTATFLIN 589
Query: 194 ILSNKSLQYQSPTQILYRRDPSYSHLRTFGCLCYP 298
+ +K LQ SP L+++ P Y LR F CLCYP
Sbjct: 590 RMPSKVLQNNSPYFTLFQKVPDYESLRVFSCLCYP 624
Score = 53.9 bits (128), Expect(2) = 1e-24
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHSPSP 483
HKLQ RS+ +FL Y H++G+ C + + ++ + H++FDE QF AK H SP
Sbjct: 632 HKLQYRSVQSLFLGYSLHNKGFLCLDFLTGRVYITPHVVFDEGQFPLAKTHPLSP 686
>ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [Sorghum bicolor]
gi|241937618|gb|EES10763.1| hypothetical protein
SORBIDRAFT_06g016046 [Sorghum bicolor]
Length = 856
Score = 74.3 bits (181), Expect(2) = 1e-24
Identities = 37/79 (46%), Positives = 47/79 (59%)
Frame = +2
Query: 68 QNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQSPTQILYR 247
QN K+E +RT+NN+ LL A +PP +W AL+T T L+N L K+L +P LY
Sbjct: 1 QNGKAERMLRTVNNVTRTLLFQASMPPTYWADALATATLLINRLPTKTLNMSTPFFALYG 60
Query: 248 RDPSYSHLRTFGCLCYPPL 304
PSY LR FG CYP L
Sbjct: 61 TLPSYHDLRVFGSTCYPNL 79
Score = 64.7 bits (156), Expect(2) = 1e-24
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +1
Query: 295 PPTPSTKIHKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHS 474
P +T HKL PRS CVF+ Y H+GY C +L++ ++I+ RH++FDE+ F F+ L
Sbjct: 77 PNLTATTPHKLAPRSSLCVFIGYSPDHKGYRCLDLTTNRVIISRHVVFDETTFPFS-LRR 135
Query: 475 PSP 483
PSP
Sbjct: 136 PSP 138
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 86.3 bits (212), Expect(2) = 1e-24
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +2
Query: 44 FSAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQ 223
FS P+ S QN + E K R + ALL+HA +P ++W YA T T+L+N + +K L+Y
Sbjct: 636 FSCPYNSXQNGRVERKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYD 695
Query: 224 SPTQILYRRDPSYSHLRTFGCLCYP 298
SP L+RR P Y R FGCLCYP
Sbjct: 696 SPYFTLFRRHPDYKSFRVFGCLCYP 720
Score = 52.4 bits (124), Expect(2) = 1e-24
Identities = 22/54 (40%), Positives = 36/54 (66%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHSPS 480
HKLQ RS+ C+FL Y +H+G+ C + ++ ++ + H++FDES F A+ S S
Sbjct: 728 HKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFPLAQSKSSS 781
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 75.9 bits (185), Expect(2) = 1e-23
Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Frame = +2
Query: 47 SAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQS 226
S PHT QN +E K R I + +LL++A +P +FW A TYL+N + +K++Q +
Sbjct: 605 SCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRVPSKTIQNST 664
Query: 227 PTQILYRRDPSYSHLRTFGCLCYPPL-----HQLKF 319
P + L+ + P Y LR FGC C+P L H+L+F
Sbjct: 665 PLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQF 700
Score = 59.3 bits (142), Expect(2) = 1e-23
Identities = 25/52 (48%), Positives = 38/52 (73%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHS 474
HKLQ RS CVFL + +HH+G+ C ++SS ++ + R ++FDE+ F F+ LHS
Sbjct: 696 HKLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENIFPFSTLHS 747
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 86.3 bits (212), Expect(2) = 2e-23
Identities = 42/85 (49%), Positives = 54/85 (63%)
Frame = +2
Query: 44 FSAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQ 223
FS P+T QN ++E K+R I ALL A +P +FW YA TT +L+N L K L YQ
Sbjct: 476 FSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTTIFLINRLPTKVLNYQ 535
Query: 224 SPTQILYRRDPSYSHLRTFGCLCYP 298
SP QIL+ + P+Y + FGCLCYP
Sbjct: 536 SPFQILFGKSPNYHIFKIFGCLCYP 560
Score = 48.1 bits (113), Expect(2) = 2e-23
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFF 459
+KL RS CVFL Y S+H+GY C N + ++ + RH++F E+ F F
Sbjct: 568 NKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPF 614
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 79.7 bits (195), Expect(2) = 4e-23
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +2
Query: 47 SAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQS 226
S P+ QN +E K R I + ALL HA VP +FW A TYL+N L +K +QY +
Sbjct: 216 SCPYAHQQNGSAERKHRHIVEVGLALLAHASVPLKFWDEAFLAATYLINRLPSKVIQYSA 275
Query: 227 PTQILYRRDPSYSHLRTFGCLCYPPL 304
P + L + P+YS LRTFGC C+P L
Sbjct: 276 PLERLLDQKPNYSALRTFGCACWPNL 301
Score = 53.9 bits (128), Expect(2) = 4e-23
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = +1
Query: 322 KLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHS 474
KL+ RS CVFL Y + H+G+ C ++S+ ++ + R ++FDE+ F F+KLHS
Sbjct: 308 KLEFRSKQCVFLGYSNIHKGFKCLDVSTGRVYISRDVVFDENVFPFSKLHS 358
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 80.5 bits (197), Expect(2) = 7e-23
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Frame = +2
Query: 5 LPIFVPEMLLFFIFSAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTY 184
L F E+ + S PHT QN E K R I + +LL HA +P +FW A TY
Sbjct: 578 LHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAHASMPLKFWDEAFLAATY 637
Query: 185 LLNILSNKSLQYQSPTQILYRRDPSYSHLRTFGCLCYPPL-----HQLKF 319
L+N L +K +++ +P + L+++ P Y LRTFGC C+P L H+L+F
Sbjct: 638 LINRLPSKVIKFDTPLERLFKQTPDYKSLRTFGCACWPNLRPYNTHKLQF 687
Score = 52.4 bits (124), Expect(2) = 7e-23
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLH 471
HKLQ RS CVFL + + H+G+ C ++S+ ++ + R + FDE F FA LH
Sbjct: 683 HKLQFRSKQCVFLGFSNIHKGFKCLDVSTGRVYVSRDVTFDEQVFPFANLH 733
>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
Length = 920
Score = 80.1 bits (196), Expect(2) = 7e-23
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +2
Query: 68 QNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQSPTQILYR 247
QN + E K + ALL+HA +P ++W YA TTT+L+N + +K L+Y SP L+R
Sbjct: 447 QNGRVERKHXHVVEXGLALLSHAXLPXKYWHYAFQTTTFLINRMXSKVLEYDSPYFTLFR 506
Query: 248 RDPSYSHLRTFGCLCYP 298
R P Y LR FGCLCYP
Sbjct: 507 RHPDYKSLRVFGCLCYP 523
Score = 52.8 bits (125), Expect(2) = 7e-23
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHS 474
HKLQ RS+ C FL Y +H+G+ C + ++ ++ + H++FDES F A+L S
Sbjct: 531 HKLQYRSVQCFFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFPLAQLKS 582
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 84.3 bits (207), Expect(2) = 9e-23
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = +2
Query: 44 FSAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQ 223
FS P+T QN ++E K+R I ALL A +P +FW YA T +L+N L K L YQ
Sbjct: 667 FSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTAIFLINRLPTKVLNYQ 726
Query: 224 SPTQILYRRDPSYSHLRTFGCLCYP 298
SP QIL+ + P+Y + FGCLCYP
Sbjct: 727 SPFQILFGKSPNYHIFKIFGCLCYP 751
Score = 48.1 bits (113), Expect(2) = 9e-23
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFF 459
+KL RS CVFL Y S+H+GY C N + ++ + RH++F E+ F F
Sbjct: 759 NKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPF 805
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 74.3 bits (181), Expect(2) = 9e-23
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Frame = +2
Query: 47 SAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQS 226
S P+ QN +E K R I + ALL HA +P + W T YL+N NK +++++
Sbjct: 568 SCPYAHQQNSSAERKHRHIVEVGLALLAHASMPLKLWDEVFYTAAYLINRTPNKVIKFET 627
Query: 227 PTQILYRRDPSYSHLRTFGCLCYPPL-----HQLKF 319
P + L+++ P+YS LR FGC C+P L H+L+F
Sbjct: 628 PLERLFKQLPNYSLLRVFGCACWPNLRPYNNHKLQF 663
Score = 58.2 bits (139), Expect(2) = 9e-23
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHSPS 480
HKLQ RS CVFLDY H+G+ C ++S+ ++ + R +IFDE+ F F+ LH S
Sbjct: 659 HKLQFRSKQCVFLDYSHLHKGFKCLDVSTGRVYISRDVIFDENVFSFSTLHENS 712
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 76.6 bits (187), Expect(2) = 1e-22
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +2
Query: 47 SAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQS 226
S PHT QN +E K + I + +LL++A +P +FW A TYL+N + +K++Q +
Sbjct: 608 SCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNST 667
Query: 227 PTQILYRRDPSYSHLRTFGCLCYPPLH 307
P + L+ + P YS LR F C C+P LH
Sbjct: 668 PLEKLFNQKPDYSSLRVFSCTCWPHLH 694
Score = 55.5 bits (132), Expect(2) = 1e-22
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHS 474
HKLQ RS CVFL + +HH+G+ ++SS ++ + R ++FDE+ F F+ LHS
Sbjct: 699 HKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRDVVFDENVFPFSTLHS 750
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 76.6 bits (187), Expect(2) = 1e-22
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +2
Query: 47 SAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQS 226
S PHT QN +E K + I + +LL++A +P +FW A TYL+N + +K++Q +
Sbjct: 608 SCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNST 667
Query: 227 PTQILYRRDPSYSHLRTFGCLCYPPLH 307
P + L+ + P YS LR F C C+P LH
Sbjct: 668 PLEKLFNQKPDYSSLRVFSCTCWPHLH 694
Score = 55.5 bits (132), Expect(2) = 1e-22
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHS 474
HKLQ RS CVFL + +HH+G+ ++SS ++ + R ++FDE+ F F+ LHS
Sbjct: 699 HKLQFRSKQCVFLGFSTHHKGFKFLDVSSGRVYISRDVVFDENVFPFSTLHS 750
>emb|CAN69753.1| hypothetical protein VITISV_024937 [Vitis vinifera]
Length = 793
Score = 82.0 bits (201), Expect(2) = 1e-22
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +2
Query: 44 FSAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQ 223
FS P+ S QN + E+K R + LL+HA +P ++W YA TTT+L+N + +K L+Y
Sbjct: 230 FSYPYNSAQNGRVEWKHRHVVETGLTLLSHASLPMKYWHYAFQTTTFLINRMPSKVLEYD 289
Query: 224 SPTQILYRRDPSYSHLRTFGCLCYP 298
SP L+RR P Y LR F LCYP
Sbjct: 290 SPYFTLFRRHPDYKSLRVFDYLCYP 314
Score = 50.1 bits (118), Expect(2) = 1e-22
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHS 474
H+LQ RS+ C FL Y +H+G+ C + ++ ++ + H +FDES F FA+ S
Sbjct: 322 HRLQYRSVQCFFLGYSLNHKGFLCLDYATGRVYITPHAVFDESTFPFAQSKS 373
>emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera]
Length = 1380
Score = 80.1 bits (196), Expect(2) = 2e-22
Identities = 38/85 (44%), Positives = 53/85 (62%)
Frame = +2
Query: 44 FSAPHTSYQNKKSEYKIRTINNIICALLTHAFVPPQFWTYALSTTTYLLNILSNKSLQYQ 223
FS P+ QN + E K R + ALL+HA +P ++W YA T+T+L+N + +K L+Y
Sbjct: 426 FSCPYNLAQNGRVERKHRHVVETGLALLSHASLPMKYWHYAFQTSTFLINGMPSKVLKYD 485
Query: 224 SPTQILYRRDPSYSHLRTFGCLCYP 298
SP L+R+ Y LR FGCLCYP
Sbjct: 486 SPYFTLFRKHLDYKSLRVFGCLCYP 510
Score = 51.2 bits (121), Expect(2) = 2e-22
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = +1
Query: 319 HKLQPRSIPCVFLDYPSHHRGYHCYNLSSRKIIMYRHIIFDESQFFFAKLHS 474
HKLQ RS+ C+FL Y +H+G+ C + ++ ++ + H++FDES F A+ S
Sbjct: 518 HKLQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTFPLAQSKS 569