BLASTX nr result

ID: Atropa21_contig00022952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00022952
         (613 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249342.1| PREDICTED: uncharacterized protein LOC101254...    77   5e-12
ref|XP_006339233.1| PREDICTED: glycine-rich RNA-binding protein ...    75   1e-11

>ref|XP_004249342.1| PREDICTED: uncharacterized protein LOC101254436 [Solanum
           lycopersicum]
          Length = 257

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 40/68 (58%), Positives = 51/68 (75%)
 Frame = +2

Query: 95  SGENSFGFGTGGNTDAASNSFTSSFGNSDQLGTDSTSNQAESGDVNSPVGAGEDYRDDNG 274
           SGE++FGFGT G+ + AS S  ++  NS   G D+TSNQAE+ DVNSPV AGE+YRDDN 
Sbjct: 190 SGESNFGFGTSGD-NYASGSTDAAASNSFSFGNDTTSNQAEASDVNSPVDAGENYRDDN- 247

Query: 275 EPGDYANR 298
           +  DYA+R
Sbjct: 248 DSNDYADR 255


>ref|XP_006339233.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
           [Solanum tuberosum]
          Length = 263

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 46/74 (62%), Positives = 53/74 (71%), Gaps = 6/74 (8%)
 Frame = +2

Query: 95  SGENSFGFGTGGN------TDAASNSFTSSFGNSDQLGTDSTSNQAESGDVNSPVGAGED 256
           SGENS GFGT G+      TDAASNSF  SFGN      D+TSNQAE+ DVNSPV AGE+
Sbjct: 197 SGENSSGFGTSGDNYASGSTDAASNSF--SFGN------DATSNQAEACDVNSPVDAGEN 248

Query: 257 YRDDNGEPGDYANR 298
           YRD+N +  DYA+R
Sbjct: 249 YRDNN-DSSDYADR 261


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