BLASTX nr result

ID: Atropa21_contig00022783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00022783
         (455 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349058.1| PREDICTED: uncharacterized RNA-binding prote...   127   2e-27
ref|XP_004250997.1| PREDICTED: MKI67 FHA domain-interacting nucl...   127   2e-27
ref|XP_006347215.1| PREDICTED: uncharacterized RNA-binding prote...   126   3e-27
ref|XP_006347213.1| PREDICTED: uncharacterized RNA-binding prote...   126   3e-27
ref|XP_004241297.1| PREDICTED: MKI67 FHA domain-interacting nucl...   126   3e-27
gb|ABB87134.1| RNA binding protein-like protein [Solanum tuberosum]   126   3e-27
ref|NP_001275247.1| uncharacterized LOC102594986 [Solanum tubero...   124   1e-26
ref|XP_003533917.1| PREDICTED: MKI67 FHA domain-interacting nucl...   100   2e-19
gb|ESW21665.1| hypothetical protein PHAVU_005G0893000g, partial ...   100   3e-19
ref|XP_006574462.1| PREDICTED: uncharacterized protein LOC100814...    99   5e-19
ref|XP_002530883.1| poly-A binding protein, putative [Ricinus co...    98   1e-18
gb|AFK45161.1| unknown [Medicago truncatula]                           97   2e-18
ref|XP_003592542.1| MKI67 FHA domain-interacting nucleolar phosp...    97   2e-18
gb|EOY19185.1| RNA-binding (RRM/RBD/RNP motifs) family protein i...    97   2e-18
gb|EOY19184.1| RNA-binding (RRM/RBD/RNP motifs) family protein i...    97   2e-18
ref|XP_002277092.2| PREDICTED: MKI67 FHA domain-interacting nucl...    96   4e-18
ref|XP_004159468.1| PREDICTED: LOW QUALITY PROTEIN: MKI67 FHA do...    96   7e-18
ref|XP_004140894.1| PREDICTED: MKI67 FHA domain-interacting nucl...    96   7e-18
gb|EXB32334.1| MKI67 FHA domain-interacting nucleolar phosphopro...    95   9e-18
ref|XP_004496980.1| PREDICTED: uncharacterized RNA-binding prote...    94   1e-17

>ref|XP_006349058.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
           [Solanum tuberosum]
          Length = 216

 Score =  127 bits (318), Expect = 2e-27
 Identities = 62/75 (82%), Positives = 64/75 (85%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKGVNRWYKPLDWVKIERK QDKERTLEEH+KLV  IL        RIEAAGIDY+CPEM
Sbjct: 142 WKGVNRWYKPLDWVKIERKRQDKERTLEEHNKLVGEILKRDKKRRKRIEAAGIDYKCPEM 201

Query: 274 VGAIQAAPKKIRFAD 230
           VGAIQAAPKKIRFAD
Sbjct: 202 VGAIQAAPKKIRFAD 216


>ref|XP_004250997.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Solanum lycopersicum]
          Length = 216

 Score =  127 bits (318), Expect = 2e-27
 Identities = 62/75 (82%), Positives = 63/75 (84%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKGVNRWYKPLDWVKIERK QDKERTLEEH+KLV  IL        RIEAAGIDYECPEM
Sbjct: 142 WKGVNRWYKPLDWVKIERKRQDKERTLEEHNKLVGEILKRDKKRRKRIEAAGIDYECPEM 201

Query: 274 VGAIQAAPKKIRFAD 230
           VGAIQAAPKKIRF D
Sbjct: 202 VGAIQAAPKKIRFTD 216


>ref|XP_006347215.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
           isoform X3 [Solanum tuberosum]
          Length = 185

 Score =  126 bits (317), Expect = 3e-27
 Identities = 60/73 (82%), Positives = 63/73 (86%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKGVNRWYKPLDWVKIERK QDKERTL++H KLVEGIL        RIEAAGIDYECPEM
Sbjct: 110 WKGVNRWYKPLDWVKIERKRQDKERTLDDHKKLVEGILKRDKKRRKRIEAAGIDYECPEM 169

Query: 274 VGAIQAAPKKIRF 236
           VG+IQAAPKKIRF
Sbjct: 170 VGSIQAAPKKIRF 182


>ref|XP_006347213.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
           isoform X1 [Solanum tuberosum]
           gi|565360925|ref|XP_006347214.1| PREDICTED:
           uncharacterized RNA-binding protein C1827.05c-like
           isoform X2 [Solanum tuberosum]
          Length = 217

 Score =  126 bits (317), Expect = 3e-27
 Identities = 60/73 (82%), Positives = 63/73 (86%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKGVNRWYKPLDWVKIERK QDKERTL++H KLVEGIL        RIEAAGIDYECPEM
Sbjct: 142 WKGVNRWYKPLDWVKIERKRQDKERTLDDHKKLVEGILKRDKKRRKRIEAAGIDYECPEM 201

Query: 274 VGAIQAAPKKIRF 236
           VG+IQAAPKKIRF
Sbjct: 202 VGSIQAAPKKIRF 214


>ref|XP_004241297.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Solanum lycopersicum]
          Length = 217

 Score =  126 bits (317), Expect = 3e-27
 Identities = 60/73 (82%), Positives = 63/73 (86%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKGVNRWYKPLDWVKIERK QDKERTL++H KLVEGIL        RIEAAGIDYECPEM
Sbjct: 142 WKGVNRWYKPLDWVKIERKRQDKERTLDDHKKLVEGILKRDKKRRKRIEAAGIDYECPEM 201

Query: 274 VGAIQAAPKKIRF 236
           VG+IQAAPKKIRF
Sbjct: 202 VGSIQAAPKKIRF 214


>gb|ABB87134.1| RNA binding protein-like protein [Solanum tuberosum]
          Length = 217

 Score =  126 bits (317), Expect = 3e-27
 Identities = 60/73 (82%), Positives = 63/73 (86%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKGVNRWYKPLDWVKIERK QDKERTL++H KLVEGIL        RIEAAGIDYECPEM
Sbjct: 142 WKGVNRWYKPLDWVKIERKRQDKERTLDDHKKLVEGILKRDKKRRKRIEAAGIDYECPEM 201

Query: 274 VGAIQAAPKKIRF 236
           VG+IQAAPKKIRF
Sbjct: 202 VGSIQAAPKKIRF 214


>ref|NP_001275247.1| uncharacterized LOC102594986 [Solanum tuberosum]
           gi|413968566|gb|AFW90620.1| RNA binding protein-like
           protein [Solanum tuberosum]
          Length = 217

 Score =  124 bits (312), Expect = 1e-26
 Identities = 59/73 (80%), Positives = 62/73 (84%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKGVNRWYKPLDWVKIERK QDKERTL++H KLVEGIL        RIEAAGIDYECPEM
Sbjct: 142 WKGVNRWYKPLDWVKIERKRQDKERTLDDHKKLVEGILKRDKKRRKRIEAAGIDYECPEM 201

Query: 274 VGAIQAAPKKIRF 236
           VG+I AAPKKIRF
Sbjct: 202 VGSIHAAPKKIRF 214


>ref|XP_003533917.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Glycine max]
          Length = 214

 Score =  100 bits (250), Expect = 2e-19
 Identities = 50/75 (66%), Positives = 56/75 (74%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           W+G N  YKPLD V+IERK  DK+RTLEEH KLVE +L        RIEAAGIDYECPE+
Sbjct: 140 WRGFNYHYKPLDSVQIERKRHDKDRTLEEHKKLVEKVLKHDQKRRKRIEAAGIDYECPEI 199

Query: 274 VGAIQAAPKKIRFAD 230
           VG IQ APKKI+F D
Sbjct: 200 VGNIQPAPKKIKFED 214


>gb|ESW21665.1| hypothetical protein PHAVU_005G0893000g, partial [Phaseolus
           vulgaris]
          Length = 124

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 50/75 (66%), Positives = 57/75 (76%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           W+G +  +KPLD+V+IERK  DKERTLEEH KLVE IL        RIEAAGIDYECPE+
Sbjct: 50  WRGFSYRHKPLDYVQIERKRHDKERTLEEHKKLVERILKHDQKRRKRIEAAGIDYECPEI 109

Query: 274 VGAIQAAPKKIRFAD 230
           VG IQ APKKI+F D
Sbjct: 110 VGNIQPAPKKIKFDD 124


>ref|XP_006574462.1| PREDICTED: uncharacterized protein LOC100814276 isoform X1 [Glycine
           max]
          Length = 211

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 49/75 (65%), Positives = 56/75 (74%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           W+G N  YKPLD V+IERK  DKERTL+EH KLV+ +L        RIEAAGIDYECPE+
Sbjct: 137 WRGFNYHYKPLDSVQIERKRHDKERTLKEHQKLVDKVLKHDQKRRKRIEAAGIDYECPEI 196

Query: 274 VGAIQAAPKKIRFAD 230
           VG IQ APKKI+F D
Sbjct: 197 VGNIQPAPKKIKFED 211


>ref|XP_002530883.1| poly-A binding protein, putative [Ricinus communis]
           gi|223529536|gb|EEF31489.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 216

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 48/73 (65%), Positives = 55/73 (75%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKG N  YKPLDWV+IERK Q+K+RTLEEH KLVE I+        RIEAAG+DYECP +
Sbjct: 141 WKGFNYRYKPLDWVQIERKLQNKDRTLEEHKKLVEKIMKRDKKRQKRIEAAGLDYECPAV 200

Query: 274 VGAIQAAPKKIRF 236
           VG IQ A K+IRF
Sbjct: 201 VGEIQPAAKRIRF 213


>gb|AFK45161.1| unknown [Medicago truncatula]
          Length = 213

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 46/75 (61%), Positives = 57/75 (76%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKG N  YKPLD ++IER+  DKERTLEEH KLV+ ++        +IEAAGIDYECPE+
Sbjct: 139 WKGFNYRYKPLDTLQIERELHDKERTLEEHKKLVDRVMKRDKKRRKKIEAAGIDYECPEI 198

Query: 274 VGAIQAAPKKIRFAD 230
           VG +Q+APKKI+F D
Sbjct: 199 VGNLQSAPKKIKFED 213


>ref|XP_003592542.1| MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein
           [Medicago truncatula] gi|355481590|gb|AES62793.1| MKI67
           FHA domain-interacting nucleolar phosphoprotein-like
           protein [Medicago truncatula]
           gi|388505268|gb|AFK40700.1| unknown [Medicago
           truncatula]
          Length = 213

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 46/75 (61%), Positives = 57/75 (76%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKG N  YKPLD ++IER+  DKERTLEEH KLV+ ++        +IEAAGIDYECPE+
Sbjct: 139 WKGFNYRYKPLDTLQIERELHDKERTLEEHKKLVDRVMKRDKKRRKKIEAAGIDYECPEI 198

Query: 274 VGAIQAAPKKIRFAD 230
           VG +Q+APKKI+F D
Sbjct: 199 VGNLQSAPKKIKFED 213


>gb|EOY19185.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2, partial
           [Theobroma cacao]
          Length = 212

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 47/73 (64%), Positives = 55/73 (75%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           W+G N  YKP+D+V+IERK Q+K RTLEEH KLVE IL         IEAAGIDYECPE+
Sbjct: 137 WRGFNYKYKPVDYVQIERKRQNKVRTLEEHKKLVEKILKRDQKRRKMIEAAGIDYECPEI 196

Query: 274 VGAIQAAPKKIRF 236
           VG+ Q APKKI+F
Sbjct: 197 VGSSQPAPKKIKF 209


>gb|EOY19184.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 1
           [Theobroma cacao]
          Length = 215

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 47/73 (64%), Positives = 55/73 (75%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           W+G N  YKP+D+V+IERK Q+K RTLEEH KLVE IL         IEAAGIDYECPE+
Sbjct: 140 WRGFNYKYKPVDYVQIERKRQNKVRTLEEHKKLVEKILKRDQKRRKMIEAAGIDYECPEI 199

Query: 274 VGAIQAAPKKIRF 236
           VG+ Q APKKI+F
Sbjct: 200 VGSSQPAPKKIKF 212


>ref|XP_002277092.2| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Vitis vinifera]
           gi|298204899|emb|CBI34206.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 50/73 (68%), Positives = 55/73 (75%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKGVNR YKPLD V+IERK Q+KERTLE+  KLVEGI         RIEAAGIDYECPE+
Sbjct: 140 WKGVNRLYKPLDRVQIERKRQNKERTLEKQKKLVEGIGKRDQKRRKRIEAAGIDYECPEI 199

Query: 274 VGAIQAAPKKIRF 236
           VG  + A KKIRF
Sbjct: 200 VGISRPASKKIRF 212


>ref|XP_004159468.1| PREDICTED: LOW QUALITY PROTEIN: MKI67 FHA domain-interacting
           nucleolar phosphoprotein-like [Cucumis sativus]
          Length = 212

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 44/73 (60%), Positives = 54/73 (73%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKG N  ++PL+W ++ERKH +KERTLEEH KLV+ IL        RI AAGIDYECPE+
Sbjct: 137 WKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEI 196

Query: 274 VGAIQAAPKKIRF 236
           VG +Q  PKKI+F
Sbjct: 197 VGGVQPTPKKIKF 209


>ref|XP_004140894.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Cucumis sativus]
          Length = 212

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 44/73 (60%), Positives = 54/73 (73%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKG N  ++PL+W ++ERKH +KERTLEEH KLV+ IL        RI AAGIDYECPE+
Sbjct: 137 WKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEI 196

Query: 274 VGAIQAAPKKIRF 236
           VG +Q  PKKI+F
Sbjct: 197 VGGVQPTPKKIKF 209


>gb|EXB32334.1| MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein
           [Morus notabilis]
          Length = 216

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 48/73 (65%), Positives = 55/73 (75%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           WKG N  YKPLD V+IERK  +KERTLEE  KL++ I+        RIEAAGIDYECPE+
Sbjct: 143 WKGFNFRYKPLDRVQIERKRLNKERTLEERQKLIDKIIKRDLARQKRIEAAGIDYECPEI 202

Query: 274 VGAIQAAPKKIRF 236
           VG+IQ APKKIRF
Sbjct: 203 VGSIQPAPKKIRF 215


>ref|XP_004496980.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
           isoform X1 [Cicer arietinum]
           gi|502120496|ref|XP_004496981.1| PREDICTED:
           uncharacterized RNA-binding protein C1827.05c-like
           isoform X2 [Cicer arietinum]
           gi|502120500|ref|XP_004496982.1| PREDICTED:
           uncharacterized RNA-binding protein C1827.05c-like
           isoform X3 [Cicer arietinum]
           gi|502120503|ref|XP_004496983.1| PREDICTED:
           uncharacterized RNA-binding protein C1827.05c-like
           isoform X4 [Cicer arietinum]
          Length = 209

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/75 (60%), Positives = 56/75 (74%)
 Frame = -2

Query: 454 WKGVNRWYKPLDWVKIERKHQDKERTLEEHSKLVEGILXXXXXXXXRIEAAGIDYECPEM 275
           W+G N  YKP+D ++IER+  DKERTLEEH KLV+ I+        RIEAAGIDYECP +
Sbjct: 135 WRGFNYRYKPIDSLQIERERHDKERTLEEHKKLVDRIVKRDKKRRKRIEAAGIDYECPNI 194

Query: 274 VGAIQAAPKKIRFAD 230
           VG +Q+APKKI+F D
Sbjct: 195 VGNLQSAPKKIKFED 209


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