BLASTX nr result
ID: Atropa21_contig00021428
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00021428
(863 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein A... 52 3e-16
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A... 51 6e-11
ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein A... 47 1e-10
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A... 55 2e-10
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A... 55 2e-10
ref|XP_003629928.1| Cytochrome P450 [Medicago truncatula] gi|355... 35 1e-06
ref|XP_006341249.1| PREDICTED: uncharacterized protein LOC102594... 44 2e-06
>ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 330
Score = 51.6 bits (122), Expect(4) = 3e-16
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = -1
Query: 635 PDIYYVLFPMPIKIEKRNDKLRKGFLWQGKRDCKTFDFVKCNFVTT--KRGRLGIKNL 468
P LFP+P + K+ D++R+ FLWQG + K F VK V T K G LGIKNL
Sbjct: 16 PTYMMSLFPIPAGVIKKLDRIRRNFLWQGNSEKKRFHLVKWESVVTGKKNGGLGIKNL 73
Score = 37.4 bits (85), Expect(4) = 3e-16
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -2
Query: 679 LGGRLILINSALDAIPTYIMSCF 611
+GGRL LINS L+A+PTY+MS F
Sbjct: 1 MGGRLTLINSVLNALPTYMMSLF 23
Score = 35.8 bits (81), Expect(4) = 3e-16
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 9/109 (8%)
Frame = -3
Query: 459 NRSLLIKWWWRFSVEDDAFM*TPMLHGLSKNTDGRLSYFSK*CI------FRETL*ALWP 298
+ +L +KW WR+S ED + + S+ +K ++ LW
Sbjct: 77 SEALRMKWLWRYSFEDQLMW----KRVVGAKYEAEDSWMTKDVTSPYGVSLWRSIRELWE 132
Query: 297 SRVLQSELAIGR--KVYFWHGNWLGHSPLRYLFP-LYNLAQDTKLTLAQ 160
L S++ +G K FW W L LFP +YNL + T+A+
Sbjct: 133 EVKLNSKVKVGNGNKTKFWKDEWHESGNLELLFPDIYNLVLSQQRTIAE 181
Score = 26.6 bits (57), Expect(4) = 3e-16
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 145 GWNILFRRNPNDREVRR 95
GWN FRR+ ND EV R
Sbjct: 187 GWNFQFRRHLNDWEVMR 203
>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 399
Score = 51.2 bits (121), Expect(3) = 6e-11
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = -1
Query: 617 LFPMPIKIEKRNDKLRKGFLWQGKRDCKTFDFVKCNFVTT--KRGRLGIKNL 468
LFP+P + K+ D++R+ FLWQG + K F VK V T K G LGIKNL
Sbjct: 4 LFPIPAGVIKKLDRIRRNFLWQGNSEKKRFHLVKWESVVTGKKNGGLGIKNL 55
Score = 35.8 bits (81), Expect(3) = 6e-11
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 9/109 (8%)
Frame = -3
Query: 459 NRSLLIKWWWRFSVEDDAFM*TPMLHGLSKNTDGRLSYFSK*CI------FRETL*ALWP 298
+ +L +KW WR+S ED + + S+ +K ++ LW
Sbjct: 59 SEALRMKWLWRYSFEDQLMW----KRVVGAKYEAEDSWMTKDVTSPYGVSLWRSIRELWE 114
Query: 297 SRVLQSELAIGR--KVYFWHGNWLGHSPLRYLFP-LYNLAQDTKLTLAQ 160
L S++ +G K FW W L LFP +YNL + T+A+
Sbjct: 115 EVKLNSKVKVGNGNKTKFWKDEWHESGNLELLFPDIYNLVLSQQRTIAE 163
Score = 26.6 bits (57), Expect(3) = 6e-11
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 145 GWNILFRRNPNDREVRR 95
GWN FRR+ ND EV R
Sbjct: 169 GWNFQFRRHLNDWEVMR 185
>ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 514
Score = 47.4 bits (111), Expect(3) = 1e-10
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = -1
Query: 611 PMPIKIEKRNDKLRKGFLWQGKRDCKTFDFVKCNFV--TTKRGRLGIKNLKV 462
P+P K+ K DKLR+ F+W+G D K VK + + K G LGIKNL++
Sbjct: 154 PIPDKVRKSIDKLRRNFIWEGNGDSKRLHLVKWKTLISSKKAGGLGIKNLRI 205
Score = 38.1 bits (87), Expect(3) = 1e-10
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Frame = -3
Query: 459 NRSLLIKWWWRFSVEDDAF-------M*TPMLHGLSKNTDGRLSYFSK*CIFRETL*ALW 301
N SLL KW WR++ E+ A M H +K + +++ LW
Sbjct: 207 NMSLLFKWLWRYNTEEQALWRQVIQCRHEQMGHWTTKPVTSTYGVG-----YWKSIRNLW 261
Query: 300 PSRVLQSELAI--GRKVYFWHGNWLGHSPL 217
+ + + + G+K+ FW +WLG+ PL
Sbjct: 262 EVFIANTRVRLGNGKKISFWRDDWLGNGPL 291
Score = 26.9 bits (58), Expect(3) = 1e-10
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = -2
Query: 676 GGRLILINSALDAIP 632
GGR++L+NS LD++P
Sbjct: 140 GGRVVLVNSVLDSLP 154
>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 556
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = -1
Query: 635 PDIYYVLFPMPIKIEKRNDKLRKGFLWQGKRDCKTFDFVKCNFVTT--KRGRLGIKNLKV 462
P LFP+P I KR D +R+ FLWQG ++ + F VK N VTT K G LGIKN+++
Sbjct: 155 PTYMLSLFPIPPGITKRLDSIRRKFLWQGNKENRGFHLVKWNAVTTGKKNGGLGIKNMEL 214
Score = 37.4 bits (85), Expect(2) = 2e-10
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2
Query: 676 GGRLILINSALDAIPTYIMSCF 611
GGRL LINS LDA+PTY++S F
Sbjct: 141 GGRLTLINSVLDALPTYMLSLF 162
>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 450
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = -1
Query: 635 PDIYYVLFPMPIKIEKRNDKLRKGFLWQGKRDCKTFDFVKCNFVTT--KRGRLGIKNLKV 462
P LFP+P I KR D +R+ FLWQG ++ + F VK N VTT K G LGIKN+++
Sbjct: 49 PTYMLSLFPIPPGITKRLDSIRRKFLWQGNKENRGFHLVKWNAVTTGKKNGGLGIKNMEL 108
Score = 37.4 bits (85), Expect(2) = 2e-10
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2
Query: 676 GGRLILINSALDAIPTYIMSCF 611
GGRL LINS LDA+PTY++S F
Sbjct: 35 GGRLTLINSVLDALPTYMLSLF 56
>ref|XP_003629928.1| Cytochrome P450 [Medicago truncatula] gi|355523950|gb|AET04404.1|
Cytochrome P450 [Medicago truncatula]
Length = 948
Score = 35.4 bits (80), Expect(3) = 1e-06
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = -3
Query: 483 GYQESESVNRSLLIKWWWRFSVEDDAFM*TPML--HGLSKNT--DGRLSYFSK*CIFRET 316
G ++ VN +LL KW WR+ V D + +G+ T GRL+ F +
Sbjct: 747 GVRDLRQVNLALLAKWRWRYLVRDGGLWRDTLAARYGVCYPTLVAGRLA-------FVKE 799
Query: 315 L*ALWPSRVLQSELAIGRKVYFWHGNWLGHSPLRYLF 205
W S + + G +FWH W G + LR F
Sbjct: 800 ATGDWFSDGVVRVIEDGLSTHFWHDPWCGPTILRVRF 836
Score = 33.1 bits (74), Expect(3) = 1e-06
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -1
Query: 635 PDIYYVLFPMPIKIEKRNDKLRKGFLWQGKRDCKTFDFVKCNFV--TTKRGRLGIKNLK 465
P Y + MP+K+ K+ +L++ FLW G + ++ + V + G LG+++L+
Sbjct: 694 PIFYMSVMKMPVKVWKKIVRLQREFLWGGVKRSRSIPWASWAIVCKPKREGGLGVRDLR 752
Score = 30.4 bits (67), Expect(3) = 1e-06
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -2
Query: 679 LGGRLILINSALDAIPTYIMS 617
LGGR++L+NS L+ IP + MS
Sbjct: 679 LGGRVVLLNSVLNVIPIFYMS 699
>ref|XP_006341249.1| PREDICTED: uncharacterized protein LOC102594392 [Solanum tuberosum]
Length = 479
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = -1
Query: 599 KIEKRNDKLRKGFLWQGKRDCKTFDFVKCNFV--TTKRGRLGIKNLKV 462
K EKR D LRK FLW+G + K F VK + + + + G +GI+NLK+
Sbjct: 337 KCEKRLDALRKNFLWEGNSETKKFHLVKWDTLIESKQAGGMGIRNLKI 384
Score = 34.3 bits (77), Expect(2) = 2e-06
Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 12/102 (11%)
Frame = -3
Query: 483 GYQESESVNRSLLIKWWWRFSVEDDAF----------M*TPMLHGLSKNTDGRLSYFSK* 334
G + + N+ L++KW WRF+ + A M P + + +T G +
Sbjct: 378 GIRNLKIQNQCLMMKWLWRFAFSEQALWKDVIQANYEMEGPRITKMVTSTYGSSHW---- 433
Query: 333 CIFRETL*ALWPS--RVLQSELAIGRKVYFWHGNWLGHSPLR 214
T+ WP +L GRK FW WL LR
Sbjct: 434 ----RTIRNYWPKLRENCSIKLGNGRKTSFWEDRWLEQGSLR 471