BLASTX nr result
ID: Atropa21_contig00021355
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00021355
(1013 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349930.1| PREDICTED: translation initiation factor IF-... 270 9e-70
ref|NP_001234573.1| translation initiation factor IF-1, chloropl... 266 7e-69
ref|XP_002324240.2| hypothetical protein POPTR_0018s00640g [Popu... 135 3e-29
ref|XP_002308613.2| hypothetical protein POPTR_0006s25780g [Popu... 132 2e-28
ref|XP_004517199.1| PREDICTED: translation initiation factor IF-... 128 4e-27
ref|YP_007507146.1| translation initiation factor 1 (chloroplast... 127 5e-27
ref|YP_817517.1| translational initiation factor 1 [Coffea arabi... 127 5e-27
gb|ESW27209.1| hypothetical protein PHAVU_003G183400g [Phaseolus... 127 7e-27
ref|NP_001237201.1| translation initiation factor IF-1, chloropl... 127 7e-27
ref|XP_003628540.1| Translation initiation factor [Medicago trun... 127 9e-27
gb|AGW04550.1| translation initiation factor 1 [Eustegia minuta] 126 1e-26
gb|AEX65197.1| translation initiation factor 1 [Portulaca oleracea] 126 1e-26
gb|AER53178.1| translation initiation factor 1 [Asclepias subaph... 126 1e-26
ref|YP_008578574.1| translation initiation factor 1 (chloroplast... 126 1e-26
gb|AER52693.1| translation initiation factor 1 [Asclepias cutler... 126 1e-26
gb|AER52611.1| translation initiation factor 1 [Asclepias coulteri] 126 1e-26
ref|YP_004465222.1| translational initiation factor 1 [Jacobaea ... 126 1e-26
ref|YP_008578657.1| translation initiation factor 1 (chloroplast... 126 1e-26
ref|YP_001294219.1| translational initiation factor 1 [Buxus mic... 126 1e-26
gb|AGW05008.1| translation initiation factor 1 [Vincetoxicum ros... 126 2e-26
>ref|XP_006349930.1| PREDICTED: translation initiation factor IF-1, chloroplastic-like
[Solanum tuberosum]
Length = 155
Score = 270 bits (689), Expect = 9e-70
Identities = 134/143 (93%), Positives = 140/143 (97%)
Frame = +1
Query: 376 TTAMSACSPTPTSCRASNSLALPRSVFVSKQEKLMKQAKGLLVKTQQQSKKKNNFTNSRR 555
T AM+ACSP+PTSC+ SNSLALPRSVFVSKQE+LMKQAKGLLVKT+QQSKKKNN TNSRR
Sbjct: 13 TAAMAACSPSPTSCKTSNSLALPRSVFVSKQEELMKQAKGLLVKTEQQSKKKNNSTNSRR 72
Query: 556 TTSIQCLSQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVK 735
TT+IQCLSQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVK
Sbjct: 73 TTNIQCLSQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVK 132
Query: 736 IEVSRYDSSKGRIIYRLRGGREG 804
IEVSRYDSSKGRIIYRLRGGREG
Sbjct: 133 IEVSRYDSSKGRIIYRLRGGREG 155
>ref|NP_001234573.1| translation initiation factor IF-1, chloroplastic [Solanum
lycopersicum] gi|75332321|sp|Q94KR9.1|IF1C_SOLLC
RecName: Full=Translation initiation factor IF-1,
chloroplastic; Flags: Precursor
gi|13774423|gb|AAK38868.1|AF347664_1 translation
initiation factor IF1 [Solanum lycopersicum]
Length = 156
Score = 266 bits (681), Expect = 7e-69
Identities = 136/144 (94%), Positives = 139/144 (96%), Gaps = 1/144 (0%)
Frame = +1
Query: 376 TTAMSACSPTPTSCRASNSLALPRSVFVSKQEKLMKQAKGLLVKTQQQSKKK-NNFTNSR 552
T AM+ACSPTPTSC+ SNSLALPRSVFVSKQE+LMKQAK LLVKTQQQSKKK NN TNSR
Sbjct: 13 TAAMAACSPTPTSCKTSNSLALPRSVFVSKQEELMKQAKSLLVKTQQQSKKKKNNSTNSR 72
Query: 553 RTTSIQCLSQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRV 732
RTTSIQCLSQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRV
Sbjct: 73 RTTSIQCLSQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRV 132
Query: 733 KIEVSRYDSSKGRIIYRLRGGREG 804
KIEVSRYDSSKGRIIYRLRGGREG
Sbjct: 133 KIEVSRYDSSKGRIIYRLRGGREG 156
>ref|XP_002324240.2| hypothetical protein POPTR_0018s00640g [Populus trichocarpa]
gi|550317729|gb|EEF02805.2| hypothetical protein
POPTR_0018s00640g [Populus trichocarpa]
Length = 143
Score = 135 bits (339), Expect = 3e-29
Identities = 73/137 (53%), Positives = 96/137 (70%)
Frame = +1
Query: 379 TAMSACSPTPTSCRASNSLALPRSVFVSKQEKLMKQAKGLLVKTQQQSKKKNNFTNSRRT 558
T + A + T S + +N P +VF S+ + GL+ T S+ + TN++
Sbjct: 8 TQIHALTATGFSTKPTN--LSPSTVFFSQSLTKTTHSFGLIATTPTISRFPVS-TNAKAN 64
Query: 559 TSIQCLSQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKI 738
+ EQKWTHEGS+TESLPNGMFRV+LDN D+++GYISGKIRKNF+R+LPGDRVK+
Sbjct: 65 PT-----GEQKWTHEGSVTESLPNGMFRVRLDNKDLIIGYISGKIRKNFVRILPGDRVKV 119
Query: 739 EVSRYDSSKGRIIYRLR 789
EVSRYDSS+GRI+YRLR
Sbjct: 120 EVSRYDSSRGRIVYRLR 136
>ref|XP_002308613.2| hypothetical protein POPTR_0006s25780g [Populus trichocarpa]
gi|550337090|gb|EEE92136.2| hypothetical protein
POPTR_0006s25780g [Populus trichocarpa]
Length = 147
Score = 132 bits (333), Expect = 2e-28
Identities = 65/116 (56%), Positives = 83/116 (71%)
Frame = +1
Query: 442 PRSVFVSKQEKLMKQAKGLLVKTQQQSKKKNNFTNSRRTTSIQCLSQEQKWTHEGSITES 621
P +VF + + GL+ T + + + S + + EQKWTHEGS+TES
Sbjct: 29 PTTVFFGQSLTRTTHSFGLVATTTSTTSSRFPVSTSAKANP----TGEQKWTHEGSVTES 84
Query: 622 LPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDSSKGRIIYRLR 789
LPNGMFRV LDN D+++GYISGKIRKNF+R+LPGDRVK+EVSRYDSS+GRI+YRLR
Sbjct: 85 LPNGMFRVLLDNKDLIIGYISGKIRKNFVRILPGDRVKVEVSRYDSSRGRIVYRLR 140
>ref|XP_004517199.1| PREDICTED: translation initiation factor IF-1, chloroplastic-like
[Cicer arietinum]
Length = 149
Score = 128 bits (321), Expect = 4e-27
Identities = 57/71 (80%), Positives = 67/71 (94%)
Frame = +1
Query: 577 SQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYD 756
S EQKW HEG ITESLPNGMFRV+LDN D++LGYISG+IRKN++R+LPGDRV++EVSRYD
Sbjct: 71 SSEQKWVHEGLITESLPNGMFRVRLDNEDLILGYISGRIRKNYVRILPGDRVRVEVSRYD 130
Query: 757 SSKGRIIYRLR 789
SSKGRI+YRLR
Sbjct: 131 SSKGRIVYRLR 141
>ref|YP_007507146.1| translation initiation factor 1 (chloroplast) [Salvia miltiorrhiza]
gi|401879776|gb|AFQ30963.1| translation initiation
factor 1 (chloroplast) [Salvia miltiorrhiza]
gi|573461986|emb|CCQ71655.1| translation initiation
factor 1 (chloroplast) [Salvia miltiorrhiza]
Length = 77
Score = 127 bits (320), Expect = 5e-27
Identities = 58/70 (82%), Positives = 68/70 (97%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKWTHEG ITESLPNGMFRV+LDN D++LGY+SGKIR++FIR+LPGD+VKIEVSRYDS
Sbjct: 2 KEQKWTHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDKVKIEVSRYDS 61
Query: 760 SKGRIIYRLR 789
S+GRIIYRLR
Sbjct: 62 SRGRIIYRLR 71
>ref|YP_817517.1| translational initiation factor 1 [Coffea arabica]
gi|122153654|sp|A0A370.1|IF1C_COFAR RecName:
Full=Translation initiation factor IF-1, chloroplastic
gi|116242198|gb|ABJ89713.1| translational initiation
factor 1 [Coffea arabica]
Length = 77
Score = 127 bits (320), Expect = 5e-27
Identities = 58/70 (82%), Positives = 68/70 (97%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKWTHEG ITESLPNGMFRV+LDN D++LGY+SGKIR++FIR+LPGDRVKIEVSRYDS
Sbjct: 2 KEQKWTHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDS 61
Query: 760 SKGRIIYRLR 789
++GRIIYRLR
Sbjct: 62 TRGRIIYRLR 71
>gb|ESW27209.1| hypothetical protein PHAVU_003G183400g [Phaseolus vulgaris]
Length = 139
Score = 127 bits (319), Expect = 7e-27
Identities = 58/71 (81%), Positives = 66/71 (92%)
Frame = +1
Query: 577 SQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYD 756
S EQKW HEG I ESLPNGMFRV+LDN D++LGYISGKIRKN++R+LPGDRVK+EVSRYD
Sbjct: 64 SGEQKWVHEGLIMESLPNGMFRVRLDNEDLILGYISGKIRKNYVRILPGDRVKVEVSRYD 123
Query: 757 SSKGRIIYRLR 789
SSKGRI+YRLR
Sbjct: 124 SSKGRIVYRLR 134
>ref|NP_001237201.1| translation initiation factor IF-1, chloroplastic [Glycine max]
gi|75166516|sp|Q94KR7.1|IF1C_SOYBN RecName:
Full=Translation initiation factor IF-1, chloroplastic;
Flags: Precursor gi|13774427|gb|AAK38870.1|AF347666_1
translation initiation factor IF1 [Glycine max]
Length = 138
Score = 127 bits (319), Expect = 7e-27
Identities = 71/133 (53%), Positives = 86/133 (64%), Gaps = 3/133 (2%)
Frame = +1
Query: 400 PTPTSCRASNSLALP---RSVFVSKQEKLMKQAKGLLVKTQQQSKKKNNFTNSRRTTSIQ 570
PTP SC + LALP R++ L+ A L + + K
Sbjct: 18 PTP-SCTQFSPLALPPFHRTLSFLAPPPLLPAAPALSAASAAKPDK-------------- 62
Query: 571 CLSQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSR 750
S EQKW HEG I ESLPNGMFRV+LDN D++LGYISGKIRKN++R+LPGDRVK+EV+R
Sbjct: 63 --SGEQKWVHEGLIMESLPNGMFRVRLDNEDLILGYISGKIRKNYVRILPGDRVKVEVTR 120
Query: 751 YDSSKGRIIYRLR 789
YDSSKGRI+YRLR
Sbjct: 121 YDSSKGRIVYRLR 133
>ref|XP_003628540.1| Translation initiation factor [Medicago truncatula]
gi|355522562|gb|AET03016.1| Translation initiation
factor [Medicago truncatula]
Length = 147
Score = 127 bits (318), Expect = 9e-27
Identities = 56/71 (78%), Positives = 67/71 (94%)
Frame = +1
Query: 577 SQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYD 756
+ EQKW HEG ITESLPNGMFRV+LDN D++LGYISG+IRKN++R+LPGDRV++EVSRYD
Sbjct: 69 ASEQKWVHEGLITESLPNGMFRVRLDNEDLILGYISGRIRKNYVRILPGDRVRVEVSRYD 128
Query: 757 SSKGRIIYRLR 789
SSKGRI+YRLR
Sbjct: 129 SSKGRIVYRLR 139
>gb|AGW04550.1| translation initiation factor 1 [Eustegia minuta]
Length = 91
Score = 126 bits (317), Expect = 1e-26
Identities = 58/70 (82%), Positives = 67/70 (95%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKW HEG ITESLPNGMFRV+LDN D++LGYISGKIR++FIR+LPGDRVK+EVSRYDS
Sbjct: 2 KEQKWIHEGLITESLPNGMFRVRLDNEDLILGYISGKIRRSFIRILPGDRVKVEVSRYDS 61
Query: 760 SKGRIIYRLR 789
+KGRIIYRLR
Sbjct: 62 TKGRIIYRLR 71
>gb|AEX65197.1| translation initiation factor 1 [Portulaca oleracea]
Length = 77
Score = 126 bits (317), Expect = 1e-26
Identities = 58/70 (82%), Positives = 67/70 (95%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKW HEG ITESLPNGMFRV+LDN D++LGY+SGKIR++FIR+LPGDRVKIEVSRYDS
Sbjct: 2 KEQKWIHEGLITESLPNGMFRVRLDNEDMILGYVSGKIRRSFIRILPGDRVKIEVSRYDS 61
Query: 760 SKGRIIYRLR 789
+KGRIIYRLR
Sbjct: 62 TKGRIIYRLR 71
>gb|AER53178.1| translation initiation factor 1 [Asclepias subaphylla]
Length = 91
Score = 126 bits (317), Expect = 1e-26
Identities = 58/70 (82%), Positives = 67/70 (95%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKW HEG ITESLPNGMFRV+LDN D++LGYISGKIR++FIR+LPGDRVK+EVSRYDS
Sbjct: 4 KEQKWIHEGLITESLPNGMFRVRLDNEDLILGYISGKIRRSFIRILPGDRVKVEVSRYDS 63
Query: 760 SKGRIIYRLR 789
+KGRIIYRLR
Sbjct: 64 TKGRIIYRLR 73
>ref|YP_008578574.1| translation initiation factor 1 (chloroplast) [Asclepias nivea]
gi|355332172|gb|AER52856.1| translation initiation
factor 1 [Asclepias leptopus]
gi|544187156|gb|AGW05094.1| translation initiation
factor 1 (chloroplast) [Asclepias nivea]
Length = 91
Score = 126 bits (317), Expect = 1e-26
Identities = 58/70 (82%), Positives = 67/70 (95%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKW HEG ITESLPNGMFRV+LDN D++LGYISGKIR++FIR+LPGDRVK+EVSRYDS
Sbjct: 4 KEQKWIHEGLITESLPNGMFRVRLDNEDLILGYISGKIRRSFIRILPGDRVKVEVSRYDS 63
Query: 760 SKGRIIYRLR 789
+KGRIIYRLR
Sbjct: 64 TKGRIIYRLR 73
>gb|AER52693.1| translation initiation factor 1 [Asclepias cutleri]
gi|355332090|gb|AER52775.1| translation initiation
factor 1 [Asclepias cutleri] gi|355332255|gb|AER52938.1|
translation initiation factor 1 [Asclepias macrotis]
gi|355332336|gb|AER53018.1| translation initiation
factor 1 [Asclepias macrotis]
gi|355332743|gb|AER53420.1| translation initiation
factor 1 [Asclepias subulata]
Length = 91
Score = 126 bits (317), Expect = 1e-26
Identities = 58/70 (82%), Positives = 67/70 (95%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKW HEG ITESLPNGMFRV+LDN D++LGYISGKIR++FIR+LPGDRVK+EVSRYDS
Sbjct: 4 KEQKWIHEGLITESLPNGMFRVRLDNEDLILGYISGKIRRSFIRILPGDRVKVEVSRYDS 63
Query: 760 SKGRIIYRLR 789
+KGRIIYRLR
Sbjct: 64 TKGRIIYRLR 73
>gb|AER52611.1| translation initiation factor 1 [Asclepias coulteri]
Length = 91
Score = 126 bits (317), Expect = 1e-26
Identities = 58/70 (82%), Positives = 67/70 (95%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKW HEG ITESLPNGMFRV+LDN D++LGYISGKIR++FIR+LPGDRVK+EVSRYDS
Sbjct: 4 KEQKWIHEGLITESLPNGMFRVRLDNEDLILGYISGKIRRSFIRILPGDRVKVEVSRYDS 63
Query: 760 SKGRIIYRLR 789
+KGRIIYRLR
Sbjct: 64 TKGRIIYRLR 73
>ref|YP_004465222.1| translational initiation factor 1 [Jacobaea vulgaris]
gi|308156116|gb|ADO15444.1| translational initiation
factor 1 [Jacobaea vulgaris]
Length = 77
Score = 126 bits (317), Expect = 1e-26
Identities = 58/70 (82%), Positives = 67/70 (95%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKW HEG ITESLPNGMFRV+LDN D++LGY+SGKIR++FIR+LPGDRVKIEVSRYDS
Sbjct: 2 KEQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDS 61
Query: 760 SKGRIIYRLR 789
S+GRIIYRLR
Sbjct: 62 SRGRIIYRLR 71
>ref|YP_008578657.1| translation initiation factor 1 (chloroplast) [Asclepias syriaca]
gi|326200314|gb|ADZ52353.1| translation initiation
factor 1 [Asclepias syriaca] gi|355331758|gb|AER52447.1|
translation initiation factor 1 [Asclepias albicans]
gi|355331841|gb|AER52529.1| translation initiation
factor 1 [Asclepias albicans]
gi|355332415|gb|AER53096.1| translation initiation
factor 1 [Asclepias masonii] gi|355332579|gb|AER53258.1|
translation initiation factor 1 [Asclepias subaphylla]
gi|355332660|gb|AER53338.1| translation initiation
factor 1 [Asclepias subulata]
gi|355332826|gb|AER53502.1| translation initiation
factor 1 [Asclepias albicans x Asclepias subulata]
gi|544187243|gb|AGW05171.1| translation initiation
factor 1 (chloroplast) [Asclepias syriaca]
Length = 85
Score = 126 bits (317), Expect = 1e-26
Identities = 58/70 (82%), Positives = 67/70 (95%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKW HEG ITESLPNGMFRV+LDN D++LGYISGKIR++FIR+LPGDRVK+EVSRYDS
Sbjct: 4 KEQKWIHEGLITESLPNGMFRVRLDNEDLILGYISGKIRRSFIRILPGDRVKVEVSRYDS 63
Query: 760 SKGRIIYRLR 789
+KGRIIYRLR
Sbjct: 64 TKGRIIYRLR 73
>ref|YP_001294219.1| translational initiation factor 1 [Buxus microphylla]
gi|482651234|ref|YP_007890408.1| translational
initiation factor 1 (chloroplast) [Ardisia polysticta]
gi|190359547|sp|A6MM71.1|IF1C_BUXMI RecName:
Full=Translation initiation factor IF-1, chloroplastic
gi|146762319|gb|ABQ45283.1| translational initiation
factor 1 [Buxus microphylla] gi|456368005|gb|AGG36919.1|
translational initiation factor 1 (chloroplast) [Ardisia
polysticta]
Length = 77
Score = 126 bits (317), Expect = 1e-26
Identities = 58/70 (82%), Positives = 67/70 (95%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKW HEG ITESLPNGMFRV+LDN D++LGY+SGKIR++FIR+LPGDRVKIEVSRYDS
Sbjct: 2 KEQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDS 61
Query: 760 SKGRIIYRLR 789
S+GRIIYRLR
Sbjct: 62 SRGRIIYRLR 71
>gb|AGW05008.1| translation initiation factor 1 [Vincetoxicum rossicum]
Length = 89
Score = 126 bits (316), Expect = 2e-26
Identities = 57/70 (81%), Positives = 67/70 (95%)
Frame = +1
Query: 580 QEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYDS 759
+EQKW HEG ITESLPNGMFRV+LDN D++LGY+SGKIR++FIR+LPGDRVK+EVSRYDS
Sbjct: 2 KEQKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKVEVSRYDS 61
Query: 760 SKGRIIYRLR 789
+KGRIIYRLR
Sbjct: 62 TKGRIIYRLR 71