BLASTX nr result

ID: Atropa21_contig00021211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00021211
         (535 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349313.1| PREDICTED: KH domain-containing protein At1g...   122   4e-26
ref|XP_004230441.1| PREDICTED: KH domain-containing protein At1g...   122   4e-26
ref|XP_006431583.1| hypothetical protein CICLE_v10002036mg [Citr...   113   2e-23
ref|XP_006431582.1| hypothetical protein CICLE_v10002036mg [Citr...   113   2e-23
gb|ESW20568.1| hypothetical protein PHAVU_006G219900g [Phaseolus...   112   5e-23
ref|NP_001239952.1| uncharacterized protein LOC100796731 [Glycin...   112   5e-23
ref|XP_006591877.1| PREDICTED: uncharacterized protein LOC100796...   112   5e-23
gb|EMJ26951.1| hypothetical protein PRUPE_ppa009432mg [Prunus pe...   111   9e-23
ref|XP_003592904.1| KH domain-containing protein [Medicago trunc...   111   9e-23
gb|EXB64108.1| KH domain-containing protein [Morus notabilis]         109   3e-22
ref|XP_002263798.1| PREDICTED: KH domain-containing protein At1g...   108   7e-22
gb|EOX97029.1| RNA-binding KH domain-containing protein isoform ...   107   2e-21
ref|XP_004300000.1| PREDICTED: KH domain-containing protein At1g...   107   2e-21
ref|XP_002328717.1| predicted protein [Populus trichocarpa] gi|5...   105   8e-21
ref|XP_002331132.1| predicted protein [Populus trichocarpa] gi|5...   104   1e-20
ref|XP_002526434.1| nucleic acid binding protein, putative [Rici...   103   2e-20
ref|NP_001055572.1| Os05g0419500 [Oryza sativa Japonica Group] g...   103   3e-20
ref|XP_006492549.1| PREDICTED: KH domain-containing protein At1g...   102   7e-20
gb|EMT15768.1| KH domain-containing protein [Aegilops tauschii]       100   2e-19
ref|XP_004133720.1| PREDICTED: KH domain-containing protein At1g...   100   2e-19

>ref|XP_006349313.1| PREDICTED: KH domain-containing protein At1g09660-like [Solanum
           tuberosum]
          Length = 295

 Score =  122 bits (307), Expect = 4e-26
 Identities = 65/84 (77%), Positives = 68/84 (80%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LHLLVEAEF EDIID+RIDHAVSILENLLKPVDESVD+YKKQQLREL+MLNGTLREE   
Sbjct: 212 LHLLVEAEFPEDIIDARIDHAVSILENLLKPVDESVDVYKKQQLRELAMLNGTLREESPS 271

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       SNTGMKRAKTGR
Sbjct: 272 MSPRMSPSMSPFSNTGMKRAKTGR 295


>ref|XP_004230441.1| PREDICTED: KH domain-containing protein At1g09660-like [Solanum
           lycopersicum]
          Length = 295

 Score =  122 bits (307), Expect = 4e-26
 Identities = 65/84 (77%), Positives = 68/84 (80%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LHLLVEAEF EDIID+RIDHAVSILENLLKPVDESVD+YKKQQLREL+MLNGTLREE   
Sbjct: 212 LHLLVEAEFPEDIIDARIDHAVSILENLLKPVDESVDVYKKQQLRELAMLNGTLREESPS 271

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       SNTGMKRAKTGR
Sbjct: 272 MSPRMSPSMSPFSNTGMKRAKTGR 295


>ref|XP_006431583.1| hypothetical protein CICLE_v10002036mg [Citrus clementina]
           gi|567878051|ref|XP_006431584.1| hypothetical protein
           CICLE_v10002036mg [Citrus clementina]
           gi|568879193|ref|XP_006492553.1| PREDICTED: KH
           domain-containing protein At1g09660/At1g09670-like
           [Citrus sinensis] gi|557533705|gb|ESR44823.1|
           hypothetical protein CICLE_v10002036mg [Citrus
           clementina] gi|557533706|gb|ESR44824.1| hypothetical
           protein CICLE_v10002036mg [Citrus clementina]
          Length = 293

 Score =  113 bits (283), Expect = 2e-23
 Identities = 59/84 (70%), Positives = 66/84 (78%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF EDII+SR+DHAV+ILENLLKPVDES+D YKKQQLREL+MLNGTLREE   
Sbjct: 210 LHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREESPS 269

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       +N GMKRAKTGR
Sbjct: 270 MSPSMSPSMSPFNNAGMKRAKTGR 293


>ref|XP_006431582.1| hypothetical protein CICLE_v10002036mg [Citrus clementina]
           gi|557533704|gb|ESR44822.1| hypothetical protein
           CICLE_v10002036mg [Citrus clementina]
          Length = 294

 Score =  113 bits (283), Expect = 2e-23
 Identities = 59/84 (70%), Positives = 66/84 (78%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF EDII+SR+DHAV+ILENLLKPVDES+D YKKQQLREL+MLNGTLREE   
Sbjct: 211 LHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREESPS 270

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       +N GMKRAKTGR
Sbjct: 271 MSPSMSPSMSPFNNAGMKRAKTGR 294


>gb|ESW20568.1| hypothetical protein PHAVU_006G219900g [Phaseolus vulgaris]
          Length = 295

 Score =  112 bits (280), Expect = 5e-23
 Identities = 58/84 (69%), Positives = 67/84 (79%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF EDII++R+DHAV+ILENLLKPVDES+D YKKQQLREL+MLNGTLREE   
Sbjct: 212 LHVLVEAEFPEDIINARLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREESPS 271

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       ++TGMKRAKTGR
Sbjct: 272 MSPSMSPSMSPFNSTGMKRAKTGR 295


>ref|NP_001239952.1| uncharacterized protein LOC100796731 [Glycine max]
           gi|255641182|gb|ACU20868.1| unknown [Glycine max]
          Length = 275

 Score =  112 bits (280), Expect = 5e-23
 Identities = 58/84 (69%), Positives = 67/84 (79%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF EDII++R+DHAV+ILENLLKPVDES+D YKKQQLREL+MLNGTLREE   
Sbjct: 192 LHVLVEAEFPEDIINARLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREESPS 251

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       ++TGMKRAKTGR
Sbjct: 252 MSPSMSPSMSPFNSTGMKRAKTGR 275


>ref|XP_006591877.1| PREDICTED: uncharacterized protein LOC100796731 isoform X1 [Glycine
           max] gi|255635453|gb|ACU18079.1| unknown [Glycine max]
          Length = 274

 Score =  112 bits (280), Expect = 5e-23
 Identities = 58/84 (69%), Positives = 67/84 (79%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF EDII++R+DHAV+ILENLLKPVDES+D YKKQQLREL+MLNGTLREE   
Sbjct: 191 LHVLVEAEFPEDIINARLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREESPS 250

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       ++TGMKRAKTGR
Sbjct: 251 MSPSMSPSMSPFNSTGMKRAKTGR 274


>gb|EMJ26951.1| hypothetical protein PRUPE_ppa009432mg [Prunus persica]
          Length = 292

 Score =  111 bits (278), Expect = 9e-23
 Identities = 58/84 (69%), Positives = 66/84 (78%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF EDII++R+DHAV+ILENLLKPVDES D YKKQQLREL+MLNGTLREE   
Sbjct: 209 LHVLVEAEFPEDIINARLDHAVAILENLLKPVDESFDHYKKQQLRELAMLNGTLREESPS 268

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       ++TGMKRAKTGR
Sbjct: 269 MSPSISPSMSPFNSTGMKRAKTGR 292


>ref|XP_003592904.1| KH domain-containing protein [Medicago truncatula]
           gi|92893883|gb|ABE91933.1| KH [Medicago truncatula]
           gi|355481952|gb|AES63155.1| KH domain-containing protein
           [Medicago truncatula]
          Length = 312

 Score =  111 bits (278), Expect = 9e-23
 Identities = 57/84 (67%), Positives = 66/84 (78%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LHLLVEAEF EDII+SR+DHAV++LENLLKPVDES+D YKKQQLREL+M+NGTLREE   
Sbjct: 229 LHLLVEAEFPEDIINSRLDHAVAVLENLLKPVDESLDHYKKQQLRELAMINGTLREESPS 288

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       ++ GMKRAKTGR
Sbjct: 289 MSPSMSPSMSPFNSNGMKRAKTGR 312


>gb|EXB64108.1| KH domain-containing protein [Morus notabilis]
          Length = 310

 Score =  109 bits (273), Expect = 3e-22
 Identities = 56/84 (66%), Positives = 65/84 (77%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF ED++++R+DHAV+ILENLLKPVDES D YKKQQLREL+MLNGTLREE   
Sbjct: 227 LHVLVEAEFPEDVVNARLDHAVAILENLLKPVDESFDHYKKQQLRELAMLNGTLREESPS 286

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       + TGMKRAKTGR
Sbjct: 287 MSPSMSPSMSPFNATGMKRAKTGR 310


>ref|XP_002263798.1| PREDICTED: KH domain-containing protein At1g09660 [Vitis vinifera]
           gi|297739511|emb|CBI29693.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score =  108 bits (270), Expect = 7e-22
 Identities = 57/84 (67%), Positives = 65/84 (77%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEFSEDII+SR++ AV+ILENLLKPVDES+D YKKQQLREL+MLNGTLREE   
Sbjct: 212 LHVLVEAEFSEDIINSRLEQAVAILENLLKPVDESLDQYKKQQLRELAMLNGTLREESPS 271

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       +  GMKRAKTGR
Sbjct: 272 MSPSMSPSMSPFNTAGMKRAKTGR 295


>gb|EOX97029.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma
           cacao] gi|508705134|gb|EOX97030.1| RNA-binding KH
           domain-containing protein isoform 1 [Theobroma cacao]
          Length = 294

 Score =  107 bits (266), Expect = 2e-21
 Identities = 55/83 (66%), Positives = 66/83 (79%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF ED+I+SR+D+AV+ILENLLKPVDES+D YKKQQLREL++LNGTLREE   
Sbjct: 211 LHVLVEAEFPEDMINSRLDYAVAILENLLKPVDESLDNYKKQQLRELALLNGTLREESPR 270

Query: 353 XXXXXXXXXXXXSNTGMKRAKTG 285
                       ++TGMKRAKTG
Sbjct: 271 MSPSMSPSMSPFNSTGMKRAKTG 293


>ref|XP_004300000.1| PREDICTED: KH domain-containing protein At1g09660-like [Fragaria
           vesca subsp. vesca]
          Length = 293

 Score =  107 bits (266), Expect = 2e-21
 Identities = 55/84 (65%), Positives = 66/84 (78%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF EDII++R+D+AV++LENLLKPVDES D YKKQQLREL+MLNGTLREE   
Sbjct: 210 LHVLVEAEFPEDIINARLDYAVAMLENLLKPVDESFDHYKKQQLRELAMLNGTLREESPS 269

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       ++TGMKRAKTG+
Sbjct: 270 MSPSLSPSMSPFNSTGMKRAKTGK 293


>ref|XP_002328717.1| predicted protein [Populus trichocarpa]
           gi|566168254|ref|XP_006385053.1| hypothetical protein
           POPTR_0004s23460g [Populus trichocarpa]
           gi|566168256|ref|XP_006385054.1| hypothetical protein
           POPTR_0004s23460g [Populus trichocarpa]
           gi|550341821|gb|ERP62850.1| hypothetical protein
           POPTR_0004s23460g [Populus trichocarpa]
           gi|550341822|gb|ERP62851.1| hypothetical protein
           POPTR_0004s23460g [Populus trichocarpa]
          Length = 294

 Score =  105 bits (261), Expect = 8e-21
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF EDII++R++HA++ILE+LLKPVDES+D YKKQQLREL++LNGTLREE   
Sbjct: 211 LHVLVEAEFPEDIINARLEHAITILESLLKPVDESLDHYKKQQLRELALLNGTLREESPS 270

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       +  GMKRAKTGR
Sbjct: 271 MSPSMSPSMSPFNTAGMKRAKTGR 294


>ref|XP_002331132.1| predicted protein [Populus trichocarpa]
           gi|566259900|ref|XP_006389504.1| hypothetical protein
           POPTR_0022s00450g [Populus trichocarpa]
           gi|118487494|gb|ABK95574.1| unknown [Populus
           trichocarpa] gi|550312327|gb|ERP48418.1| hypothetical
           protein POPTR_0022s00450g [Populus trichocarpa]
          Length = 294

 Score =  104 bits (260), Expect = 1e-20
 Identities = 53/84 (63%), Positives = 64/84 (76%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF EDI+++R+DHA++ILE+LLKPVDES D YKKQQLREL++LNGTLREE   
Sbjct: 211 LHVLVEAEFPEDIMNARLDHAITILESLLKPVDESFDNYKKQQLRELALLNGTLREESPS 270

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       +  GMKRAKTGR
Sbjct: 271 MSPSMSPSMSPFNTAGMKRAKTGR 294


>ref|XP_002526434.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223534214|gb|EEF35929.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 295

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/84 (63%), Positives = 64/84 (76%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF EDI+D+R++HAV+IL++LLKPVDES+D YKKQQLREL+MLNGTLREE   
Sbjct: 212 LHVLVEAEFPEDIVDARVEHAVTILQSLLKPVDESLDHYKKQQLRELAMLNGTLREESPS 271

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       +  GMKRAKT R
Sbjct: 272 MSPSMSPSMSPFNTAGMKRAKTVR 295


>ref|NP_001055572.1| Os05g0419500 [Oryza sativa Japonica Group]
           gi|53982667|gb|AAV25646.1| unknown protein [Oryza sativa
           Japonica Group] gi|113579123|dbj|BAF17486.1|
           Os05g0419500 [Oryza sativa Japonica Group]
           gi|215704313|dbj|BAG93747.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218196817|gb|EEC79244.1| hypothetical protein
           OsI_19999 [Oryza sativa Indica Group]
           gi|222631627|gb|EEE63759.1| hypothetical protein
           OsJ_18578 [Oryza sativa Japonica Group]
          Length = 291

 Score =  103 bits (256), Expect = 3e-20
 Identities = 53/84 (63%), Positives = 64/84 (76%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+LVEAEF  DI+D R++ AV+ILE+LLKPVDES+D YKKQQLREL++LNGTLREE   
Sbjct: 208 LHVLVEAEFPSDIVDVRLNQAVAILEDLLKPVDESMDYYKKQQLRELAILNGTLREESPS 267

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       ++TGMKRAKTGR
Sbjct: 268 PHLSPSPSVSPFNSTGMKRAKTGR 291


>ref|XP_006492549.1| PREDICTED: KH domain-containing protein At1g09660/At1g09670-like
           isoform X1 [Citrus sinensis]
           gi|568879181|ref|XP_006492550.1| PREDICTED: KH
           domain-containing protein At1g09660/At1g09670-like
           isoform X2 [Citrus sinensis]
           gi|568879183|ref|XP_006492551.1| PREDICTED: KH
           domain-containing protein At1g09660/At1g09670-like
           isoform X3 [Citrus sinensis]
          Length = 175

 Score =  102 bits (253), Expect = 7e-20
 Identities = 54/84 (64%), Positives = 62/84 (73%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+L EAEF EDII+SR+DHAV+ILENLLKPVDES+D YKKQQLRE + LNGTLREE   
Sbjct: 92  LHVLGEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREFATLNGTLREESPS 151

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       ++ GMKRAKT R
Sbjct: 152 MSPSMSPSMWPFNSAGMKRAKTRR 175


>gb|EMT15768.1| KH domain-containing protein [Aegilops tauschii]
          Length = 292

 Score =  100 bits (250), Expect = 2e-19
 Identities = 51/84 (60%), Positives = 64/84 (76%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LH+L+EAEF  DI+D+R++ AV ILE+LLKPVDES+D +KKQQLREL++LNGTLREE   
Sbjct: 209 LHVLIEAEFPADIVDARLNQAVVILEDLLKPVDESMDYFKKQQLRELAILNGTLREESPS 268

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       ++TGMKRAKTGR
Sbjct: 269 PSPHLSPSVSPFNSTGMKRAKTGR 292


>ref|XP_004133720.1| PREDICTED: KH domain-containing protein At1g09660-like [Cucumis
           sativus] gi|449478123|ref|XP_004155228.1| PREDICTED: KH
           domain-containing protein At1g09660-like [Cucumis
           sativus]
          Length = 289

 Score =  100 bits (249), Expect = 2e-19
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = -3

Query: 533 LHLLVEAEFSEDIIDSRIDHAVSILENLLKPVDESVDIYKKQQLRELSMLNGTLREEXXX 354
           LHLLVEAEF ED I++R+DHAV++LE+LLKPVDE +D YKKQQLREL++LNGTLREE   
Sbjct: 210 LHLLVEAEFPEDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREE--- 266

Query: 353 XXXXXXXXXXXXSNTGMKRAKTGR 282
                       ++TG+KRAKTGR
Sbjct: 267 -SPSMSPSMSPFNSTGLKRAKTGR 289


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