BLASTX nr result
ID: Atropa21_contig00021158
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00021158
(637 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 145 2e-63
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 131 6e-47
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 132 7e-47
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 106 1e-40
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 102 1e-35
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 98 2e-35
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 100 3e-35
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 103 7e-35
ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264... 125 1e-34
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 90 2e-34
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 99 2e-34
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 95 2e-33
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 89 2e-33
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 100 8e-33
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 92 2e-32
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 87 2e-32
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 93 2e-32
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana] 97 3e-32
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 87 6e-32
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 88 8e-32
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 145 bits (365), Expect(2) = 2e-63
Identities = 74/128 (57%), Positives = 98/128 (76%), Gaps = 7/128 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGA--- 466
Y+SVEW +L++VM+ L FP F WV++CV+TVNY+I+VNG+ T F+AAKGLRQG
Sbjct: 397 YDSVEWPFLEQVMEGLGFPDLFTKWVMKCVKTVNYTIVVNGQNTQRFDAAKGLRQGDPMS 456
Query: 465 ----AIAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
AIAMEYLSR LKGL ++K+F +HP+ +KL +THLCFADDLLLF+R DL SI A++
Sbjct: 457 PFLFAIAMEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQK 516
Query: 297 RFQQFLEA 274
F +F +A
Sbjct: 517 CFTEFSQA 524
Score = 124 bits (310), Expect(2) = 2e-63
Identities = 57/91 (62%), Positives = 72/91 (79%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KSS+YC G+ + +II LG+ + E+PFKYLG+PLS+KKL I W P IEK++ARI S
Sbjct: 533 KSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINS 592
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLFI 2
WTAKKLSYAGR QL+++V FG+QA WAQLFI
Sbjct: 593 WTAKKLSYAGRAQLVKTVLFGVQALWAQLFI 623
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 131 bits (329), Expect(2) = 6e-47
Identities = 62/128 (48%), Positives = 90/128 (70%), Gaps = 7/128 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQG---- 469
Y+SVEW++L+ ++K L FP FI W++ CV+TV+YSIL+NG ++PF+A KGLRQG
Sbjct: 592 YDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLS 651
Query: 468 ---AAIAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
A++MEYLSR + + + F+FHP+C ++ +THL FADDLL+FAR D SI+ +
Sbjct: 652 PFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMA 711
Query: 297 RFQQFLEA 274
F F +A
Sbjct: 712 AFNSFSKA 719
Score = 83.2 bits (204), Expect(2) = 6e-47
Identities = 36/90 (40%), Positives = 57/90 (63%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KS +Y G+ E +++ + +G +PF+YLG+PL++KKL +P I+KI R
Sbjct: 728 KSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQG 787
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
W A LSYAGR QL++++ + +Q YW Q+F
Sbjct: 788 WVAHLLSYAGRLQLVKTILYSMQNYWGQIF 817
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 132 bits (333), Expect(2) = 7e-47
Identities = 66/128 (51%), Positives = 86/128 (67%), Gaps = 7/128 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQG---- 469
Y+SVEW +L+ ++ FP F+GW++ECV TV+YS+LVNG T PF A KGLRQG
Sbjct: 589 YDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMS 648
Query: 468 ---AAIAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
A+ MEYLSR L+ L + +F+FHP+C +L ITHL FADDLL+F R D S+ M
Sbjct: 649 PFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNV 708
Query: 297 RFQQFLEA 274
FQ+F A
Sbjct: 709 AFQKFSHA 716
Score = 81.3 bits (199), Expect(2) = 7e-47
Identities = 38/90 (42%), Positives = 57/90 (63%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KS++Y G+ + ++ +GE+PF+YLG+PL++KKL +P +E I R +
Sbjct: 725 KSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQT 784
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
W AK LSYAGR QLI+S+ +Q YWA +F
Sbjct: 785 WMAKLLSYAGRLQLIKSILSSMQNYWAHIF 814
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 106 bits (264), Expect(2) = 1e-40
Identities = 55/133 (41%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAAIA 457
Y++V W L+ +++ L FP FI W++ V++V Y +NG T A +G+RQG I+
Sbjct: 417 YDTVHWDALEHILRELGFPDQFIKWIMIAVRSVTYVFNINGRFTRRLEARRGIRQGDPIS 476
Query: 456 -------MEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
MEYL+R L L NF++H +C K+ IT+LCFADDLLLF+R D+ S+ M D
Sbjct: 477 PLLFILVMEYLNRILSQLDKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLD 536
Query: 297 RFQQFLEARVLFI 259
+F FL + L +
Sbjct: 537 KFNTFLRSMGLHV 549
Score = 87.0 bits (214), Expect(2) = 1e-40
Identities = 43/88 (48%), Positives = 61/88 (69%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
K ++YC + K+++++ GF G+MPF+YLGIPLS+KKL + ++ I+KI+ RIT
Sbjct: 553 KCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITH 612
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQ 11
W+A LSYAGR QLIQSV F +W Q
Sbjct: 613 WSAGLLSYAGRVQLIQSVIFATINFWMQ 640
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 102 bits (254), Expect(2) = 1e-35
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 7/125 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA-- 463
++S++W +L V+ ++FP FI W+ C+ T ++SI VNGE+ F +A+GLRQG +
Sbjct: 325 FDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLS 384
Query: 462 -----IAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
I+M+ LSR L A + F +HPRC LG+THLCFADDL++ + S+ +
Sbjct: 385 PYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVK 444
Query: 297 RFQQF 283
QF
Sbjct: 445 VLNQF 449
Score = 74.3 bits (181), Expect(2) = 1e-35
Identities = 35/90 (38%), Positives = 55/90 (61%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
K+++Y G++ + + FGVG++P +YLG+PL TK+L + P I++I RI
Sbjct: 461 KTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGM 520
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
WT++ LS+AGR LI SV + I +W F
Sbjct: 521 WTSRYLSFAGRLSLINSVLWSITNFWMNAF 550
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 97.8 bits (242), Expect(2) = 2e-35
Identities = 47/125 (37%), Positives = 74/125 (59%), Gaps = 7/125 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA-- 463
++SV+W +L ++ L+FP F W+ C+ T +S+ VNGE+ F + +GLRQG A
Sbjct: 177 FDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALS 236
Query: 462 -----IAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
I M LS + A ++N +HP+C KL +THLCFADDL++F S+ + +
Sbjct: 237 PYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVIN 296
Query: 297 RFQQF 283
F++F
Sbjct: 297 IFKEF 301
Score = 78.2 bits (191), Expect(2) = 2e-35
Identities = 33/90 (36%), Positives = 58/90 (64%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KS++Y G+++ ++ I+ F G++P +YLG+PL TK++ + P ++K+ ++I+S
Sbjct: 313 KSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISS 372
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
WTA+ LSYAGR LI SV + +W +
Sbjct: 373 WTARSLSYAGRLALINSVIVSLSNFWMSAY 402
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 100 bits (248), Expect(2) = 3e-35
Identities = 48/125 (38%), Positives = 76/125 (60%), Gaps = 7/125 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA-- 463
++SV+W +L ++ L+FP F W+ C+ T +S+ VNGE+ F +++GLRQG A
Sbjct: 901 FDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALS 960
Query: 462 -----IAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
I M LS + A ++N +HP+C K+G+THLCFADDL++F SI + +
Sbjct: 961 PYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVIN 1020
Query: 297 RFQQF 283
F++F
Sbjct: 1021 VFKEF 1025
Score = 75.1 bits (183), Expect(2) = 3e-35
Identities = 33/90 (36%), Positives = 56/90 (62%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KS++Y G++ +++ + + F G++P +YLG+PL TK++ + P IE + +I+S
Sbjct: 1037 KSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISS 1096
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
WTA+ LSYAGR L+ SV I +W +
Sbjct: 1097 WTARSLSYAGRLALLNSVIVSIANFWMSAY 1126
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 103 bits (256), Expect(2) = 7e-35
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 16/141 (11%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA-- 463
++S++W +L + ++FP FI W+ C+ T ++S+ VNGE+ F +A+G+RQG A
Sbjct: 9 FDSLQWSFLINALSAMNFPGEFIHWISRCITTTSFSVQVNGELAGYFRSARGIRQGCALS 68
Query: 462 -----IAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFAR---------VD 325
I+ME LS+ L A K F FHP+C LG+THLCFADDL++ V+
Sbjct: 69 PYLFVISMEVLSKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVE 128
Query: 324 LLSITAMKDRFQQFLEARVLF 262
++++ A + Q +E L+
Sbjct: 129 VMNLFAKRSGLQINMEKTTLY 149
Score = 70.9 bits (172), Expect(2) = 7e-35
Identities = 34/90 (37%), Positives = 54/90 (60%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
K+++Y G++ + +I FG+G++P +YLG+PL TK+L P E+I RI +
Sbjct: 145 KTTLYTAGVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGT 204
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
WT++ LS+AGR LI SV + +W F
Sbjct: 205 WTSRYLSFAGRLNLISSVLWSTMNFWMSAF 234
>ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264629 [Solanum
lycopersicum]
Length = 261
Score = 125 bits (314), Expect(2) = 1e-34
Identities = 63/107 (58%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Frame = -2
Query: 573 FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGA-------AIAMEYLSRSLKGLADN 415
F+ W+ +CV+ VNYSI+ NG+ + F+AAKGLRQG AIAM+YLSR LKGL ++
Sbjct: 108 FVQWLTKCVKIVNYSIVFNGQTSQSFDAAKGLRQGDPMSPFLFAIAMKYLSRLLKGLKED 167
Query: 414 KNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKDRFQQFLEA 274
K F +HPRCSKL ITHLCFADDLL+FAR DL S+ A++ F QF +A
Sbjct: 168 KQFRYHPRCSKLDITHLCFADDLLMFARGDLKSVKAIQLCFSQFSQA 214
Score = 47.8 bits (112), Expect(2) = 1e-34
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIP 167
KSS+YC G+ Q K++I+ LG+ + E+PFKYLG+P
Sbjct: 223 KSSIYCGGVQQEVKNQIVQQLGYNMEELPFKYLGVP 258
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 90.1 bits (222), Expect(2) = 2e-34
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 7/125 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA-- 463
++ V+W +L V+K + P FI W+ C+ T ++S+ VNGE++ F + +GLRQG +
Sbjct: 751 FDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSERGLRQGCSLS 810
Query: 462 -----IAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
I M LS L A K +HPRC + +THLCFADD+++F+ SI
Sbjct: 811 PYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLA 870
Query: 297 RFQQF 283
F++F
Sbjct: 871 IFEKF 875
Score = 82.0 bits (201), Expect(2) = 2e-34
Identities = 40/90 (44%), Positives = 58/90 (64%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KS+++ G++ K I+ F +G +P KYLG+PL TK++ + P +EKI ARITS
Sbjct: 887 KSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITS 946
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
WT + LS+AGR QLI+SV I +W +F
Sbjct: 947 WTNRFLSFAGRLQLIKSVLSSITNFWLSVF 976
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 99.0 bits (245), Expect(2) = 2e-34
Identities = 45/125 (36%), Positives = 78/125 (62%), Gaps = 7/125 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAAI- 460
+NSV+W +++ ++ +DFP+ F+ W++ C+ T ++S+ VNGE+ F + +GLRQG ++
Sbjct: 131 FNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLS 190
Query: 459 ------AMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
+M+ LS+ L A K F +H RC +L +THL FADDL++ + + SI + +
Sbjct: 191 PYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVE 250
Query: 297 RFQQF 283
F F
Sbjct: 251 VFDIF 255
Score = 73.2 bits (178), Expect(2) = 2e-34
Identities = 37/90 (41%), Positives = 53/90 (58%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KS++Y G+T+ I F VG++P +YLG+PL TK+L + P +E I +I +
Sbjct: 267 KSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGT 326
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
WT + LSYAGR LI SV + I +W F
Sbjct: 327 WTTRYLSYAGRLNLITSVLWSICNFWLAAF 356
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 95.1 bits (235), Expect(2) = 2e-33
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 7/125 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA-- 463
++SV+W +L V L FP FI W+ C+ T ++S+ VNGE+ F +++GLRQG A
Sbjct: 604 FDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALS 663
Query: 462 -----IAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
I M+ LS+ L A ++F +HP+C +G+THL FADDL++ + + SI +
Sbjct: 664 PYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIK 723
Query: 297 RFQQF 283
F +F
Sbjct: 724 VFDEF 728
Score = 74.3 bits (181), Expect(2) = 2e-33
Identities = 36/90 (40%), Positives = 54/90 (60%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KS+VY G++ ++ + F G++P +YLG+PL TK+L P +E++ RI S
Sbjct: 740 KSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGS 799
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
WT++ LSYAGR LI SV + I +W F
Sbjct: 800 WTSRFLSYAGRLNLISSVLWSICNFWLAAF 829
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 89.4 bits (220), Expect(2) = 2e-33
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
K S+ C G+ K I+ GF G++PFKYLG+P+++KKL I + P I+KI+ +I
Sbjct: 111 KCSLLCAGIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKH 170
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
WTA+ LSYAGR QL+ SV F + YW F
Sbjct: 171 WTARLLSYAGRLQLVNSVMFALTNYWLNCF 200
Score = 80.1 bits (196), Expect(2) = 2e-33
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Frame = -2
Query: 549 VQTVNYSILVNGEITVPFNAAKGLRQGAAIA-------MEYLSRSLKGLADNKNFHFHPR 391
V TV+Y VNG T A +GLRQG I+ ME L+R L + + +F++HP+
Sbjct: 4 VSTVSYRFNVNGYKTEIMGARRGLRQGDPISPMLFVIVMECLNRYLYKMQKDGDFNYHPK 63
Query: 390 CSKLGITHLCFADDLLLFARVDLLSITAMKDRFQQFLEARVLFI 259
C KL IT+LCFADDLLLF+R D +S+ M ++ F +A L +
Sbjct: 64 CDKLKITNLCFADDLLLFSRGDKISVGMMMRAYESFSKATGLLV 107
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 100 bits (249), Expect(2) = 8e-33
Identities = 48/125 (38%), Positives = 76/125 (60%), Gaps = 7/125 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA-- 463
++SV+W +L+ V+ LDFP F+ W++ CV T ++S+ VN E+ FN+ +GLRQG +
Sbjct: 122 FDSVQWSFLRNVLLTLDFPQEFVHWIMLCVTTASFSVQVNRELAGYFNSLRGLRQGCSLT 181
Query: 462 -----IAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
I M+ LS+ L A + F +HP+C LG+THL FADD+++ L S+ + +
Sbjct: 182 PYLFVIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVE 241
Query: 297 RFQQF 283
F F
Sbjct: 242 VFDSF 246
Score = 66.6 bits (161), Expect(2) = 8e-33
Identities = 33/90 (36%), Positives = 52/90 (57%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
K+++Y G++++ F VG +P +YL +PL TK+ + P +E+I RI +
Sbjct: 258 KTTIYFAGISKSVCKEFEDQFHFAVGRLPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGT 317
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
WTA+ LSYAGR L+ SV + I +W F
Sbjct: 318 WTARFLSYAGRLNLVSSVLWSICNFWLSAF 347
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 91.7 bits (226), Expect(2) = 2e-32
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA-- 463
++SV+W +L ++ L FP F W+ C+ T +S+ VN E F + +GLRQG A
Sbjct: 746 FDSVQWQFLLNTLEALKFPEKFRHWIKLCISTATFSVQVNSEQAGFFGSKRGLRQGCALS 805
Query: 462 -----IAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
I M LS + A ++N +HP+C KL +THLCFADDL++F S+ + +
Sbjct: 806 PYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVIN 865
Query: 297 RFQQF---------LEARVLFIVE 253
F+ F LE L++ E
Sbjct: 866 IFKDFAGKSGLHISLEKSTLYLAE 889
Score = 74.3 bits (181), Expect(2) = 2e-32
Identities = 32/90 (35%), Positives = 56/90 (62%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KS++Y +++ ++ I+ F G++P +YLG PL TK++ + P ++K+ ++I+S
Sbjct: 882 KSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISS 941
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
WTA+ LSYAGR LI SV + +W +
Sbjct: 942 WTARSLSYAGRLALINSVIVSLSNFWMSAY 971
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 87.0 bits (214), Expect(2) = 2e-32
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 7/118 (5%)
Frame = -2
Query: 591 LDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA-------IAMEYLSRSL 433
++FP FI W++ CV T ++ + VNGE+ FN+ +GLRQG + ++M LS+ L
Sbjct: 1 MEFPPVFIHWIMLCVTTASFLVQVNGELAGYFNSTRGLRQGCSLSPYLFVVSMNVLSKLL 60
Query: 432 KGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKDRFQQFLEARVLFI 259
+ F +HPRC ++G+THL FADDL++ + + SI + + F+ F + L I
Sbjct: 61 DKATGQRRFGYHPRCKQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFETFAKCSGLRI 118
Score = 79.0 bits (193), Expect(2) = 2e-32
Identities = 39/90 (43%), Positives = 54/90 (60%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KS+VY G++ ++ H F VG +P +YLG+PL TK+L + P IE I +I S
Sbjct: 122 KSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGS 181
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
W+A+ LSYAGR LI SV + I +W F
Sbjct: 182 WSARFLSYAGRLNLISSVLWSICNFWMGAF 211
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 92.8 bits (229), Expect(2) = 2e-32
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 7/125 (5%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA-- 463
++SV+W +L + ++F FI W+ C+ T ++S+ VNG++ F + +GLRQG +
Sbjct: 251 FDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLS 310
Query: 462 -----IAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
I M+ LS+ L A + F FHP+C +LG+THL FADDL++ + SI + +
Sbjct: 311 PYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILE 370
Query: 297 RFQQF 283
F +F
Sbjct: 371 VFDEF 375
Score = 72.8 bits (177), Expect(2) = 2e-32
Identities = 36/90 (40%), Positives = 54/90 (60%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KS++Y G++ K I F VG++P +YLG+PL TK+L + P +E+I RI +
Sbjct: 387 KSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIAT 446
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
WT + S+AGR LI+SV + I +W F
Sbjct: 447 WTFRFFSFAGRFNLIKSVLWSICNFWLAAF 476
>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
Length = 382
Score = 97.4 bits (241), Expect(2) = 3e-32
Identities = 47/124 (37%), Positives = 78/124 (62%), Gaps = 9/124 (7%)
Frame = -2
Query: 636 YNSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA-- 463
++SV+W +L+ V+ +D P F+ W++ CV T ++S+ VNGE+ F + GLRQG +
Sbjct: 54 FDSVQWSFLRNVLLAMDIPSEFVHWIMLCVTTASFSVQVNGELAGYFQSKCGLRQGCSLS 113
Query: 462 -----IAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITA--M 304
I+M+ L++ L A K + +HPRC +G+THL FADDL++F+ + S + +
Sbjct: 114 PYLFVISMDVLAKMLDKAAGAKKYGYHPRCKDMGLTHLSFADDLMIFSDAGVPSSLSQEI 173
Query: 303 KDRF 292
KDR+
Sbjct: 174 KDRY 177
Score = 67.8 bits (164), Expect(2) = 3e-32
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = -1
Query: 250 MTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITSWTAKKLSY 71
++Q KDR F VG +P +YLG+PL TK+L +R +E+I +I SWTA+ LSY
Sbjct: 169 LSQEIKDRY----HFDVGHLPVRYLGLPLVTKRLTSTDYRSLLEQIKKKIGSWTARYLSY 224
Query: 70 AGRTQLIQSVFFGIQAYWAQLF 5
AGR LI SV + +W F
Sbjct: 225 AGRLSLITSVLWSTCNFWLSAF 246
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 86.7 bits (213), Expect(2) = 6e-32
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
Frame = -2
Query: 633 NSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQGAA--- 463
+SV+W +L + + FP FI W+ C+ T ++S+ VNGE+ F +++GLRQG A
Sbjct: 158 DSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSP 217
Query: 462 ----IAMEYLSRSLKGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKDR 295
I M+ LS+ L + +HP C ++G+THL FADDL++ SI + +
Sbjct: 218 YLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEV 277
Query: 294 FQQF 283
F F
Sbjct: 278 FDLF 281
Score = 77.4 bits (189), Expect(2) = 6e-32
Identities = 35/90 (38%), Positives = 57/90 (63%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
KS+++ G++ + ++ H F VGE+P +YLG+PL TK+L + + P IE+I RI S
Sbjct: 293 KSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGS 352
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLF 5
W+++ LS+AGR LI S+ + +W F
Sbjct: 353 WSSRFLSFAGRFNLISSIIWSSCNFWLSAF 382
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 87.8 bits (216), Expect(2) = 8e-32
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Frame = -2
Query: 633 NSVEWIYLQKVMKCLDFPI*FIGWVLECVQTVNYSILVNGEITVPFNAAKGLRQG----- 469
++VEW ++ ++ + P IGW+ C+ + +S+ VNGE+ F +GLRQG
Sbjct: 426 DTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRGLRQGDPLSP 485
Query: 468 --AAIAMEYLSRSL-KGLADNKNFHFHPRCSKLGITHLCFADDLLLFARVDLLSITAMKD 298
IAME LS + + + + F +H RC +L ++HLCFADDLL+F D S+ + D
Sbjct: 486 YLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHD 545
Query: 297 RFQQF 283
F F
Sbjct: 546 AFSNF 550
Score = 75.9 bits (185), Expect(2) = 8e-32
Identities = 40/91 (43%), Positives = 52/91 (57%)
Frame = -1
Query: 274 KSSVYC*GMTQAEKDRIIVHLGFGVGEMPFKYLGIPLSTKKLIMI*WRPFIEKILARITS 95
+S ++ G+ D ++ F +G P +YLGIPL T KL M P +++I RI S
Sbjct: 562 ESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKS 621
Query: 94 WTAKKLSYAGRTQLIQSVFFGIQAYWAQLFI 2
W K LS+AGR QLIQSV IQ YWA I
Sbjct: 622 WENKVLSFAGRLQLIQSVLSSIQVYWASHLI 652