BLASTX nr result
ID: Atropa21_contig00021135
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00021135
(543 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABF19052.1| gamma-tubulin, partial [Nicotiana tabacum] 185 7e-45
emb|CAC00547.1| gamma tubulin [Nicotiana tabacum] 185 7e-45
ref|XP_006351465.1| PREDICTED: tubulin gamma-1 chain-like [Solan... 184 9e-45
ref|XP_004236323.1| PREDICTED: tubulin gamma-1 chain-like [Solan... 182 3e-44
dbj|BAB18571.1| gamma-tubulin1 [Nicotiana tabacum] 179 3e-43
gb|EXC22522.1| Tubulin gamma-2 chain [Morus notabilis] 171 8e-41
ref|XP_002276643.1| PREDICTED: tubulin gamma-1 chain [Vitis vini... 171 8e-41
ref|XP_006444887.1| hypothetical protein CICLE_v10019995mg [Citr... 169 5e-40
gb|EOX95784.1| Gamma-tubulin isoform 4 [Theobroma cacao] 169 5e-40
gb|EOX95781.1| Gamma-tubulin isoform 1 [Theobroma cacao] gi|5087... 169 5e-40
ref|XP_004133834.1| PREDICTED: tubulin gamma-2 chain-like [Cucum... 167 2e-39
ref|NP_191724.1| tubulin gamma-1 chain [Arabidopsis thaliana] gi... 166 2e-39
ref|XP_006402461.1| hypothetical protein EUTSA_v10005943mg [Eutr... 166 4e-39
ref|XP_002320847.1| Tubulin gamma-1 chain family protein [Populu... 166 4e-39
ref|XP_006287661.1| hypothetical protein CARUB_v10000872mg [Caps... 164 1e-38
ref|XP_002871173.1| gamma-tubulin [Arabidopsis lyrata subsp. lyr... 164 1e-38
ref|XP_004306697.1| PREDICTED: tubulin gamma-1 chain-like [Fraga... 163 2e-38
gb|EMJ22187.1| hypothetical protein PRUPE_ppa005155mg [Prunus pe... 163 3e-38
ref|NP_196181.1| tubulin gamma-2 chain [Arabidopsis thaliana] gi... 162 4e-38
ref|XP_002532658.1| tubulin gamma chain, putative [Ricinus commu... 162 4e-38
>gb|ABF19052.1| gamma-tubulin, partial [Nicotiana tabacum]
Length = 464
Score = 185 bits (469), Expect = 7e-45
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY
Sbjct: 377 RHLFSKCLSQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 436
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPDHVLTGEGNASGTVDPKL+L
Sbjct: 437 IKWGMEDPDHVLTGEGNASGTVDPKLSL 464
>emb|CAC00547.1| gamma tubulin [Nicotiana tabacum]
Length = 474
Score = 185 bits (469), Expect = 7e-45
Identities = 86/88 (97%), Positives = 88/88 (100%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPDHVLTGEGNASGTVDPKL+L
Sbjct: 447 IKWGMEDPDHVLTGEGNASGTVDPKLSL 474
>ref|XP_006351465.1| PREDICTED: tubulin gamma-1 chain-like [Solanum tuberosum]
Length = 474
Score = 184 bits (468), Expect = 9e-45
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPDH LTGEGNASGT+DPKL+L
Sbjct: 447 IKWGMEDPDHALTGEGNASGTIDPKLSL 474
>ref|XP_004236323.1| PREDICTED: tubulin gamma-1 chain-like [Solanum lycopersicum]
Length = 474
Score = 182 bits (463), Expect = 3e-44
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPDH LTGEG+ASGT+DPKL+L
Sbjct: 447 IKWGMEDPDHALTGEGSASGTIDPKLSL 474
>dbj|BAB18571.1| gamma-tubulin1 [Nicotiana tabacum]
Length = 474
Score = 179 bits (455), Expect = 3e-43
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IK GMEDPDHVLTGEGNASGTVDPKL+L
Sbjct: 447 IKRGMEDPDHVLTGEGNASGTVDPKLSL 474
>gb|EXC22522.1| Tubulin gamma-2 chain [Morus notabilis]
Length = 456
Score = 171 bits (434), Expect = 8e-41
Identities = 80/88 (90%), Positives = 84/88 (95%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QY+KLRK+QAFLDNYR P FADNDLSEFDESRDVIESLVDEYKACESPDY
Sbjct: 369 RHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDVIESLVDEYKACESPDY 428
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDP HVLTGEGNASGTVDPKLA+
Sbjct: 429 IKWGMEDPGHVLTGEGNASGTVDPKLAV 456
>ref|XP_002276643.1| PREDICTED: tubulin gamma-1 chain [Vitis vinifera]
gi|297745396|emb|CBI40476.3| unnamed protein product
[Vitis vinifera]
Length = 474
Score = 171 bits (434), Expect = 8e-41
Identities = 78/88 (88%), Positives = 84/88 (95%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QY+KLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPDH+LTGEGNASG VDPKLA+
Sbjct: 447 IKWGMEDPDHILTGEGNASGAVDPKLAV 474
>ref|XP_006444887.1| hypothetical protein CICLE_v10019995mg [Citrus clementina]
gi|568876330|ref|XP_006491234.1| PREDICTED: tubulin
gamma-1 chain-like [Citrus sinensis]
gi|557547149|gb|ESR58127.1| hypothetical protein
CICLE_v10019995mg [Citrus clementina]
Length = 474
Score = 169 bits (427), Expect = 5e-40
Identities = 76/88 (86%), Positives = 84/88 (95%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QY+KLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPDH+LTGEGNA+G+VDP LA+
Sbjct: 447 IKWGMEDPDHILTGEGNATGSVDPNLAV 474
>gb|EOX95784.1| Gamma-tubulin isoform 4 [Theobroma cacao]
Length = 475
Score = 169 bits (427), Expect = 5e-40
Identities = 77/88 (87%), Positives = 83/88 (94%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QY+KLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 388 RHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 447
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPDH LTGEGN SGT+DPKLA+
Sbjct: 448 IKWGMEDPDHSLTGEGNGSGTLDPKLAV 475
>gb|EOX95781.1| Gamma-tubulin isoform 1 [Theobroma cacao]
gi|508703886|gb|EOX95782.1| Gamma-tubulin isoform 1
[Theobroma cacao]
Length = 474
Score = 169 bits (427), Expect = 5e-40
Identities = 77/88 (87%), Positives = 83/88 (94%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QY+KLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPDH LTGEGN SGT+DPKLA+
Sbjct: 447 IKWGMEDPDHSLTGEGNGSGTLDPKLAV 474
>ref|XP_004133834.1| PREDICTED: tubulin gamma-2 chain-like [Cucumis sativus]
gi|449480269|ref|XP_004155846.1| PREDICTED: tubulin
gamma-2 chain-like [Cucumis sativus]
Length = 474
Score = 167 bits (422), Expect = 2e-39
Identities = 76/88 (86%), Positives = 82/88 (93%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QY+KLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPD +LTGEGNASGT DP LA+
Sbjct: 447 IKWGMEDPDQILTGEGNASGTADPSLAV 474
>ref|NP_191724.1| tubulin gamma-1 chain [Arabidopsis thaliana]
gi|297821024|ref|XP_002878395.1| gamma-tubulin
[Arabidopsis lyrata subsp. lyrata]
gi|565466318|ref|XP_006291039.1| hypothetical protein
CARUB_v10017152mg [Capsella rubella]
gi|586079|sp|P38557.1|TBG1_ARATH RecName: Full=Tubulin
gamma-1 chain; AltName: Full=Gamma-1-tubulin
gi|460089|gb|AAA20653.1| g1-tubulin [Arabidopsis
thaliana] gi|6850856|emb|CAB71095.1| TUBULIN GAMMA-1
CHAIN [Arabidopsis thaliana] gi|297324233|gb|EFH54654.1|
gamma-tubulin [Arabidopsis lyrata subsp. lyrata]
gi|332646715|gb|AEE80236.1| tubulin gamma-1 chain
[Arabidopsis thaliana] gi|482559746|gb|EOA23937.1|
hypothetical protein CARUB_v10017152mg [Capsella
rubella]
Length = 474
Score = 166 bits (421), Expect = 2e-39
Identities = 76/87 (87%), Positives = 82/87 (94%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QYDKLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLA 263
IKWGMEDP+ ++TGEGNASG VDPKLA
Sbjct: 447 IKWGMEDPEQLMTGEGNASGVVDPKLA 473
>ref|XP_006402461.1| hypothetical protein EUTSA_v10005943mg [Eutrema salsugineum]
gi|557103560|gb|ESQ43914.1| hypothetical protein
EUTSA_v10005943mg [Eutrema salsugineum]
Length = 474
Score = 166 bits (419), Expect = 4e-39
Identities = 76/87 (87%), Positives = 82/87 (94%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QY+KLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLA 263
IKWGMEDP+ +LTGEGNASG VDPKLA
Sbjct: 447 IKWGMEDPEQLLTGEGNASGVVDPKLA 473
>ref|XP_002320847.1| Tubulin gamma-1 chain family protein [Populus trichocarpa]
gi|222861620|gb|EEE99162.1| Tubulin gamma-1 chain family
protein [Populus trichocarpa]
Length = 474
Score = 166 bits (419), Expect = 4e-39
Identities = 76/88 (86%), Positives = 83/88 (94%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QY+KLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPD++LT EGNA GTVDPKLA+
Sbjct: 447 IKWGMEDPDNLLTEEGNAKGTVDPKLAI 474
>ref|XP_006287661.1| hypothetical protein CARUB_v10000872mg [Capsella rubella]
gi|482556367|gb|EOA20559.1| hypothetical protein
CARUB_v10000872mg [Capsella rubella]
Length = 474
Score = 164 bits (415), Expect = 1e-38
Identities = 75/87 (86%), Positives = 81/87 (93%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QYDKLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLA 263
IKWGMEDP ++TGEGNASG VDP+LA
Sbjct: 447 IKWGMEDPGQLMTGEGNASGVVDPRLA 473
>ref|XP_002871173.1| gamma-tubulin [Arabidopsis lyrata subsp. lyrata]
gi|297317010|gb|EFH47432.1| gamma-tubulin [Arabidopsis
lyrata subsp. lyrata]
Length = 474
Score = 164 bits (415), Expect = 1e-38
Identities = 75/87 (86%), Positives = 81/87 (93%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFS+CL+QYDKLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 387 RHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLA 263
IKWGMEDP ++TGEGNASG VDPKLA
Sbjct: 447 IKWGMEDPGQLMTGEGNASGVVDPKLA 473
>ref|XP_004306697.1| PREDICTED: tubulin gamma-1 chain-like [Fragaria vesca subsp. vesca]
Length = 474
Score = 163 bits (413), Expect = 2e-38
Identities = 74/88 (84%), Positives = 83/88 (94%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QY LRK+QAFLDNYR P FA+NDLSEFDESR+++ESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYSLLRKKQAFLDNYRKFPMFAENDLSEFDESREILESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPDHVLTGEG+A+GTVDPKLA+
Sbjct: 447 IKWGMEDPDHVLTGEGSAAGTVDPKLAV 474
>gb|EMJ22187.1| hypothetical protein PRUPE_ppa005155mg [Prunus persica]
Length = 474
Score = 163 bits (412), Expect = 3e-38
Identities = 74/88 (84%), Positives = 83/88 (94%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QY LRK+QAFLDNYR P FA+NDLSEFDESR+++ESLV+EYKACESPDY
Sbjct: 387 RHLFSKCLSQYMMLRKKQAFLDNYRKFPMFAENDLSEFDESREILESLVEEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPDHVLTGEGNA+GTVDPKLA+
Sbjct: 447 IKWGMEDPDHVLTGEGNAAGTVDPKLAV 474
>ref|NP_196181.1| tubulin gamma-2 chain [Arabidopsis thaliana]
gi|586080|sp|P38558.1|TBG2_ARATH RecName: Full=Tubulin
gamma-2 chain; AltName: Full=Gamma-2-tubulin
gi|460131|gb|AAA20654.1| g2-tubulin [Arabidopsis
thaliana] gi|9759087|dbj|BAB09656.1| tubulin gamma-2
chain [Arabidopsis thaliana] gi|134031920|gb|ABO45697.1|
At5g05620 [Arabidopsis thaliana]
gi|332003517|gb|AED90900.1| tubulin gamma-2 chain
[Arabidopsis thaliana]
Length = 474
Score = 162 bits (411), Expect = 4e-38
Identities = 74/87 (85%), Positives = 80/87 (91%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFS+CL+QYDKLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 387 RHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLA 263
IKWGMEDP ++TGEGNASG DPKLA
Sbjct: 447 IKWGMEDPGQLMTGEGNASGVADPKLA 473
>ref|XP_002532658.1| tubulin gamma chain, putative [Ricinus communis]
gi|223527618|gb|EEF29731.1| tubulin gamma chain,
putative [Ricinus communis]
Length = 474
Score = 162 bits (411), Expect = 4e-38
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +3
Query: 3 RHLFSKCLTQYDKLRKRQAFLDNYRNHPTFADNDLSEFDESRDVIESLVDEYKACESPDY 182
RHLFSKCL+QY+KLRK+QAFLDNYR P FADNDLSEFDESRD+IESLVDEYKACESPDY
Sbjct: 387 RHLFSKCLSQYEKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDY 446
Query: 183 IKWGMEDPDHVLTGEGNASGTVDPKLAL 266
IKWGMEDPD +LT EGNA+GTVDP L +
Sbjct: 447 IKWGMEDPDQLLTAEGNAAGTVDPNLTV 474