BLASTX nr result
ID: Atropa21_contig00021109
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00021109
(704 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006342757.1| PREDICTED: zinc finger CCCH domain-containin... 150 5e-34
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin... 147 3e-33
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera] 147 3e-33
ref|XP_004229205.1| PREDICTED: zinc finger CCCH domain-containin... 145 1e-32
ref|XP_006419655.1| hypothetical protein CICLE_v10004882mg [Citr... 142 8e-32
ref|XP_002516892.1| nucleic acid binding protein, putative [Rici... 137 3e-30
gb|EOY06449.1| Zinc finger C-x8-C-x5-C-x3-H type family protein ... 132 1e-28
gb|EXB74844.1| Zinc finger CCCH domain-containing protein 58 [Mo... 131 2e-28
ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containin... 130 5e-28
ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|5... 129 1e-27
gb|EMJ24004.1| hypothetical protein PRUPE_ppa005056mg [Prunus pe... 128 2e-27
ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containin... 127 3e-27
ref|XP_004508292.1| PREDICTED: zinc finger CCCH domain-containin... 127 3e-27
ref|XP_006597530.1| PREDICTED: zinc finger CCCH domain-containin... 126 6e-27
gb|ESW26238.1| hypothetical protein PHAVU_003G102600g [Phaseolus... 126 8e-27
ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containin... 123 5e-26
ref|XP_002314462.1| hypothetical protein POPTR_0010s02320g [Popu... 123 7e-26
ref|XP_004486037.1| PREDICTED: zinc finger CCCH domain-containin... 122 8e-26
ref|XP_004296815.1| PREDICTED: zinc finger CCCH domain-containin... 122 8e-26
gb|EOX94971.1| Zinc finger C-x8-C-x5-C-x3-H type family protein ... 119 7e-25
>ref|XP_006342757.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Solanum tuberosum]
Length = 492
Score = 150 bits (378), Expect = 5e-34
Identities = 72/91 (79%), Positives = 84/91 (92%), Gaps = 2/91 (2%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMGISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPELV 180
+QNGVCKFGPSCKFDHPMG+SYS S+SSLADM VAPYPVGS+VGTLAPSSSSSDLRPE++
Sbjct: 369 AQNGVCKFGPSCKFDHPMGLSYSSSSSSLADMAVAPYPVGSAVGTLAPSSSSSDLRPEVI 428
Query: 181 SGSSKEDFSTQ--TMSAASGSVGSMFSEGGP 267
SGS ++ FSTQ +M+ +SGSVGSMFS+GGP
Sbjct: 429 SGSGRDGFSTQVSSMNTSSGSVGSMFSKGGP 459
>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
product [Vitis vinifera]
Length = 478
Score = 147 bits (371), Expect = 3e-33
Identities = 73/93 (78%), Positives = 84/93 (90%), Gaps = 4/93 (4%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q G+CKFGP+CKFDHPMG +SYSPSASSLADMPVAPYPVGSS+GTLAPSSSSSDLRPEL
Sbjct: 359 AQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGTLAPSSSSSDLRPEL 418
Query: 178 VSGSSKEDFSTQ---TMSAASGSVGSMFSEGGP 267
+SGSSKE ST+ +MS +SGSVGS+FS+ GP
Sbjct: 419 ISGSSKESLSTRMSSSMSTSSGSVGSIFSKSGP 451
>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
Length = 518
Score = 147 bits (371), Expect = 3e-33
Identities = 73/93 (78%), Positives = 84/93 (90%), Gaps = 4/93 (4%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q G+CKFGP+CKFDHPMG +SYSPSASSLADMPVAPYPVGSS+GTLAPSSSSSDLRPEL
Sbjct: 399 AQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGTLAPSSSSSDLRPEL 458
Query: 178 VSGSSKEDFSTQ---TMSAASGSVGSMFSEGGP 267
+SGSSKE ST+ +MS +SGSVGS+FS+ GP
Sbjct: 459 ISGSSKESLSTRMSSSMSTSSGSVGSIFSKSGP 491
>ref|XP_004229205.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Solanum lycopersicum]
Length = 496
Score = 145 bits (366), Expect = 1e-32
Identities = 70/91 (76%), Positives = 83/91 (91%), Gaps = 2/91 (2%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMGISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPELV 180
+QNGVCKFGPSCKFDHPMG++YS S+SSLADM VAPYPVGS+VGTLAPSSSSSDLRPE+
Sbjct: 373 AQNGVCKFGPSCKFDHPMGLTYSSSSSSLADMAVAPYPVGSAVGTLAPSSSSSDLRPEVN 432
Query: 181 SGSSKEDFSTQ--TMSAASGSVGSMFSEGGP 267
+GS ++ FSTQ +M+ +SGSVGSMFS+GGP
Sbjct: 433 AGSGRDGFSTQVSSMNTSSGSVGSMFSKGGP 463
>ref|XP_006419655.1| hypothetical protein CICLE_v10004882mg [Citrus clementina]
gi|568871960|ref|XP_006489144.1| PREDICTED: zinc finger
CCCH domain-containing protein 58-like [Citrus sinensis]
gi|557521528|gb|ESR32895.1| hypothetical protein
CICLE_v10004882mg [Citrus clementina]
Length = 476
Score = 142 bits (359), Expect = 8e-32
Identities = 71/93 (76%), Positives = 83/93 (89%), Gaps = 4/93 (4%)
Frame = +1
Query: 4 QNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPELV 180
Q GVCKFGP+CKFDHPMG +SYSPSASSLADMPVAPYPVGSS+GTLAPSS+SSDLRPEL+
Sbjct: 358 QRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELI 417
Query: 181 SGSSKEDFSTQ---TMSAASGSVGSMFSEGGPV 270
SGSSK+ ST+ ++S +SGSVGS+ S+ GPV
Sbjct: 418 SGSSKDSVSTRMSSSVSISSGSVGSILSKSGPV 450
>ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223543980|gb|EEF45506.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 481
Score = 137 bits (345), Expect = 3e-30
Identities = 70/94 (74%), Positives = 81/94 (86%), Gaps = 4/94 (4%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q G CKFGP+CKFDHPMG +SYSPSASSL+DMPVAPYPVGSS+GTLAPSSSSS+LRPEL
Sbjct: 356 TQRGQCKFGPACKFDHPMGSLSYSPSASSLSDMPVAPYPVGSSMGTLAPSSSSSELRPEL 415
Query: 178 VSGSSKEDFSTQ---TMSAASGSVGSMFSEGGPV 270
VSGSSK+ ST+ +MS SG VGS+FS+ G V
Sbjct: 416 VSGSSKDSSSTRMSSSMSTTSGMVGSIFSKSGTV 449
>gb|EOY06449.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Theobroma cacao]
Length = 472
Score = 132 bits (332), Expect = 1e-28
Identities = 66/94 (70%), Positives = 79/94 (84%), Gaps = 4/94 (4%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
SQ GVCKFG +CKFDHP G +SYSPSASSLADMPVAPYPVGS++GTLAPSSSSS+LRP+L
Sbjct: 350 SQRGVCKFGAACKFDHPTGTLSYSPSASSLADMPVAPYPVGSTIGTLAPSSSSSELRPDL 409
Query: 178 VSGSSKED---FSTQTMSAASGSVGSMFSEGGPV 270
+SGSSK+ + ++S S SVGS+FSEG P+
Sbjct: 410 ISGSSKDTATAIMSSSVSTLSESVGSVFSEGAPI 443
>gb|EXB74844.1| Zinc finger CCCH domain-containing protein 58 [Morus notabilis]
Length = 479
Score = 131 bits (329), Expect = 2e-28
Identities = 69/95 (72%), Positives = 78/95 (82%), Gaps = 5/95 (5%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q GVCKFG +CKF+HPMG +SYSPSASSL+DMPVAPYPVGSSVGTLAPSSSSSDLRPEL
Sbjct: 355 AQQGVCKFGAACKFNHPMGTLSYSPSASSLSDMPVAPYPVGSSVGTLAPSSSSSDLRPEL 414
Query: 178 VSGSSKEDFS----TQTMSAASGSVGSMFSEGGPV 270
S K+ S + TMS +SGSVGS FS+GG V
Sbjct: 415 YVASIKDTTSSARMSSTMSTSSGSVGSTFSKGGSV 449
>ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 484
Score = 130 bits (326), Expect = 5e-28
Identities = 65/93 (69%), Positives = 79/93 (84%), Gaps = 3/93 (3%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q GVCKFG +CKFDHPMG +SYSPSASSLADMPVAPYPVGSS+GTLAPSSSSS+LRPEL
Sbjct: 361 TQRGVCKFGSACKFDHPMGSLSYSPSASSLADMPVAPYPVGSSIGTLAPSSSSSELRPEL 420
Query: 178 VSGSSKEDFSTQ--TMSAASGSVGSMFSEGGPV 270
+GS+KE +++ +MS ++GSVG S GP+
Sbjct: 421 GAGSNKESVASRMSSMSTSTGSVGMTLSSVGPI 453
>ref|XP_002330352.1| predicted protein [Populus trichocarpa]
gi|566185418|ref|XP_006380188.1| hypothetical protein
POPTR_0008s22730g [Populus trichocarpa]
gi|550333709|gb|ERP57985.1| hypothetical protein
POPTR_0008s22730g [Populus trichocarpa]
Length = 477
Score = 129 bits (323), Expect = 1e-27
Identities = 66/91 (72%), Positives = 77/91 (84%), Gaps = 2/91 (2%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q G CKFGP+CKFDHPMG +SYSPSASSLADMPVAPY VGSS+GTLAPSSSSSDLR +
Sbjct: 357 TQRGQCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYLVGSSIGTLAPSSSSSDLRSKP 416
Query: 178 VSGSSKEDFSTQ-TMSAASGSVGSMFSEGGP 267
+SG SK+ ST+ + S SGSVGS+FS+ GP
Sbjct: 417 ISGPSKDSSSTRLSTSTPSGSVGSIFSKSGP 447
>gb|EMJ24004.1| hypothetical protein PRUPE_ppa005056mg [Prunus persica]
Length = 479
Score = 128 bits (321), Expect = 2e-27
Identities = 68/94 (72%), Positives = 79/94 (84%), Gaps = 6/94 (6%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSS--DLRP 171
+Q GVCKFGP+CKFDHPMG +SYSPSASSLADMPVAPYPVGSS+GTLAPSSSSS +LRP
Sbjct: 357 AQRGVCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYPVGSSIGTLAPSSSSSSTELRP 416
Query: 172 ELVSGSSKEDFS---TQTMSAASGSVGSMFSEGG 264
EL SGS K+ S + ++S +SGSVGS S+GG
Sbjct: 417 ELNSGSGKDLVSARMSSSLSTSSGSVGSTVSKGG 450
>ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 491
Score = 127 bits (320), Expect = 3e-27
Identities = 65/92 (70%), Positives = 75/92 (81%), Gaps = 2/92 (2%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q+GVCKFG +CKFDHPMG +SYSPSASSLADMPVAPYPVGS++ TLAPSSSSS+LRPE
Sbjct: 369 AQHGVCKFGSACKFDHPMGSMSYSPSASSLADMPVAPYPVGSTIATLAPSSSSSELRPEP 428
Query: 178 VSGSSKEDF-STQTMSAASGSVGSMFSEGGPV 270
SGSSKE S S +GS+GS S GGP+
Sbjct: 429 SSGSSKESVPSRMPSSTLTGSIGSTLSTGGPI 460
>ref|XP_004508292.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Cicer arietinum]
Length = 479
Score = 127 bits (319), Expect = 3e-27
Identities = 66/94 (70%), Positives = 75/94 (79%), Gaps = 4/94 (4%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q G+CKFGP+CKFDHPMG +SYSPSASSLADMPVAPYPVGSS+ TLAPSSSSS+LRPEL
Sbjct: 355 AQRGICKFGPACKFDHPMGSLSYSPSASSLADMPVAPYPVGSSIATLAPSSSSSELRPEL 414
Query: 178 VSGSSKEDFSTQTMSAAS---GSVGSMFSEGGPV 270
SGSS E S++ S+ S SVG S GPV
Sbjct: 415 ASGSSMESASSRMSSSTSTSTASVGLTLSTVGPV 448
>ref|XP_006597530.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 484
Score = 126 bits (317), Expect = 6e-27
Identities = 64/92 (69%), Positives = 75/92 (81%), Gaps = 2/92 (2%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q+GVCKFG +CKFDH MG +SYSPSASSLADMPVAPYPVGS++ TLAPSSSSS+LRPEL
Sbjct: 362 AQHGVCKFGSACKFDHHMGSLSYSPSASSLADMPVAPYPVGSTISTLAPSSSSSELRPEL 421
Query: 178 VSGSSKEDF-STQTMSAASGSVGSMFSEGGPV 270
SGSSKE S + S +GS+G S GGP+
Sbjct: 422 TSGSSKESVPSRMSSSTLTGSIGLTLSTGGPI 453
>gb|ESW26238.1| hypothetical protein PHAVU_003G102600g [Phaseolus vulgaris]
gi|561027599|gb|ESW26239.1| hypothetical protein
PHAVU_003G102600g [Phaseolus vulgaris]
Length = 483
Score = 126 bits (316), Expect = 8e-27
Identities = 65/93 (69%), Positives = 77/93 (82%), Gaps = 3/93 (3%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q GVCKFG +CKFDHPMG +SYSPSASSLADMPVAPYPVGSS+GTLAPSSSSS+LRPEL
Sbjct: 360 TQRGVCKFGSACKFDHPMGSLSYSPSASSLADMPVAPYPVGSSIGTLAPSSSSSELRPEL 419
Query: 178 VSGSSKEDFSTQ--TMSAASGSVGSMFSEGGPV 270
+G SKE S++ +MS ++GSVG S G +
Sbjct: 420 GAGVSKESVSSRMSSMSTSTGSVGLTLSSVGHI 452
>ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 484
Score = 123 bits (309), Expect = 5e-26
Identities = 63/93 (67%), Positives = 77/93 (82%), Gaps = 3/93 (3%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q GVCKFG +CKFDHPMG +SYSPSASSLADMPVAPYPVGSS+GTLA SS SS+LRPEL
Sbjct: 361 TQRGVCKFGSACKFDHPMGSLSYSPSASSLADMPVAPYPVGSSIGTLALSSLSSELRPEL 420
Query: 178 VSGSSKEDFSTQ--TMSAASGSVGSMFSEGGPV 270
+GS+KE +++ +MS ++GSVG S GP+
Sbjct: 421 GAGSNKESVASRMSSMSTSTGSVGLTLSSVGPI 453
>ref|XP_002314462.1| hypothetical protein POPTR_0010s02320g [Populus trichocarpa]
gi|222863502|gb|EEF00633.1| hypothetical protein
POPTR_0010s02320g [Populus trichocarpa]
Length = 456
Score = 123 bits (308), Expect = 7e-26
Identities = 63/90 (70%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q+G CKFGP+CKFDHPMG +SYSPSASSLADMPVAPYPVGSS+GTLAPSSSSSD+R +
Sbjct: 357 TQHGQCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYPVGSSIGTLAPSSSSSDMRSKP 416
Query: 178 VSGSSKEDFSTQTMSAASGSVGSMFSEGGP 267
SS S+ T S SGSVGS +S+ GP
Sbjct: 417 SKDSSSTRLSSST-STPSGSVGSKYSKSGP 445
>ref|XP_004486037.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Cicer arietinum]
Length = 487
Score = 122 bits (307), Expect = 8e-26
Identities = 64/94 (68%), Positives = 75/94 (79%), Gaps = 4/94 (4%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPM-GISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q GVCKFGP+CKFDHP+ +SYSPSASSL D+PVAPY VGSSVGTLAP SSSS+L+PEL
Sbjct: 362 TQRGVCKFGPTCKFDHPIVSLSYSPSASSLTDVPVAPYFVGSSVGTLAPPSSSSELQPEL 421
Query: 178 VSGSSKEDFSTQTMSAAS---GSVGSMFSEGGPV 270
+GSSKE ++ S+AS GSVG S GGPV
Sbjct: 422 TTGSSKESVPSRISSSASTTTGSVGLTLSTGGPV 455
>ref|XP_004296815.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Fragaria vesca subsp. vesca]
Length = 475
Score = 122 bits (307), Expect = 8e-26
Identities = 63/92 (68%), Positives = 75/92 (81%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 SQNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPEL 177
+Q G CKFG +CKFDHP+G +SYSPSASSL D+PVAPYPVGSS+GTLAPSSSSS+LRPEL
Sbjct: 355 AQRGACKFGSACKFDHPVGTLSYSPSASSLTDVPVAPYPVGSSIGTLAPSSSSSELRPEL 414
Query: 178 VSGSSKEDFSTQ---TMSAASGSVGSMFSEGG 264
SG+SK+ ST+ + S SGSVGS S+ G
Sbjct: 415 NSGTSKDSASTRMSSSPSTVSGSVGSTVSKDG 446
>gb|EOX94971.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Theobroma cacao]
Length = 476
Score = 119 bits (299), Expect = 7e-25
Identities = 62/93 (66%), Positives = 74/93 (79%), Gaps = 4/93 (4%)
Frame = +1
Query: 4 QNGVCKFGPSCKFDHPMG-ISYSPSASSLADMPVAPYPVGSSVGTLAPSSSSSDLRPELV 180
QNG CKFG +CKFDHPMG + YSPSASSL DMPVAPYPVGS + TLAPSSSSS+LRPEL+
Sbjct: 353 QNGHCKFGSTCKFDHPMGTMRYSPSASSLIDMPVAPYPVGSLLATLAPSSSSSELRPELI 412
Query: 181 SGSSKEDFSTQTMSAA---SGSVGSMFSEGGPV 270
SGS K+ + ++ S+A S SVG +FS+ G V
Sbjct: 413 SGSKKDSYLSRIPSSASTSSSSVGLIFSQTGSV 445