BLASTX nr result
ID: Atropa21_contig00021089
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00021089
(774 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II tra... 352 1e-94
ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II tra... 315 1e-83
ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259... 274 2e-71
emb|CBI27055.3| unnamed protein product [Vitis vinifera] 248 1e-63
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra... 244 3e-62
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr... 244 3e-62
ref|XP_002529152.1| conserved hypothetical protein [Ricinus comm... 242 1e-61
gb|EOY02124.1| Phytochrome and flowering time regulatory protein... 238 2e-60
gb|EOY02123.1| Phytochrome and flowering time regulatory protein... 238 2e-60
ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II tra... 227 4e-57
ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II tra... 227 4e-57
gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus... 226 5e-57
ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II tra... 226 7e-57
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot... 220 5e-55
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra... 214 3e-53
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu... 209 8e-52
ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II tra... 202 8e-50
ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II tra... 200 4e-49
gb|EXB38291.1| hypothetical protein L484_013924 [Morus notabilis] 199 1e-48
ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II tra... 197 3e-48
>ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Solanum tuberosum]
Length = 819
Score = 352 bits (902), Expect = 1e-94
Identities = 187/256 (73%), Positives = 198/256 (77%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQALAGGTSIGLQSMGGTPXXXXXXXXXXX 185
KP VSGMTQSLRPVAAAAANV+ILN VAQA Q L GGTSIGLQSMGGTP
Sbjct: 343 KPIVSGMTQSLRPVAAAAANVKILNGVAQAHQVLGGGTSIGLQSMGGTPMLSSMISSGMA 402
Query: 186 XXVPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNSNISISQPL 365
VPASQ VLSSGQSGVTT+TG+VPLAGS QN QN GNSNISISQPL
Sbjct: 403 SSVPASQAVLSSGQSGVTTMTGAVPLAGSAQNTQNSAPSSFTSTAPSMSGNSNISISQPL 462
Query: 366 SNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAGTXXXXXXX 545
+N+Q GVSM+GQTVPG+SQGNLPGTQMM SGTGMNQNML+GLGATG+PSG GT
Sbjct: 463 NNNQRGVSMTGQTVPGMSQGNLPGTQMMPSGTGMNQNMLTGLGATGLPSGTGTMMPTPGM 522
Query: 546 XXXXXXXXXXXXVNSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQGQPVFITRL 725
VNST+ANMPLSQQQTSA LPSAQSKY+KVWEGNLSGQRQGQPVFITRL
Sbjct: 523 SQQGQPGMQPVGVNSTSANMPLSQQQTSAALPSAQSKYVKVWEGNLSGQRQGQPVFITRL 582
Query: 726 EGYRSASASESLAANW 773
EGYRSASASESLAANW
Sbjct: 583 EGYRSASASESLAANW 598
>ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Solanum lycopersicum]
Length = 805
Score = 315 bits (806), Expect = 1e-83
Identities = 173/256 (67%), Positives = 183/256 (71%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQALAGGTSIGLQSMGGTPXXXXXXXXXXX 185
KP VSGMTQSLRPVAAAAANV+ILN VAQA Q L GGTSIGLQSMGGTP
Sbjct: 343 KPIVSGMTQSLRPVAAAAANVKILNGVAQAHQVLGGGTSIGLQSMGGTPMLSSMISSGMA 402
Query: 186 XXVPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNSNISISQPL 365
VPASQ VLSSGQSGVTT+TG+VPLAGS QN QN S P
Sbjct: 403 SSVPASQAVLSSGQSGVTTMTGAVPLAGSAQNTQN---------------------SAPS 441
Query: 366 SNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAGTXXXXXXX 545
S + SMSGQTVP +SQGN+PGTQMM SGTGMNQNML+GLGATG+PSG GT
Sbjct: 442 SFTSTAPSMSGQTVPAMSQGNIPGTQMMPSGTGMNQNMLTGLGATGLPSGTGTMMPTPGM 501
Query: 546 XXXXXXXXXXXXVNSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQGQPVFITRL 725
VNST+ANMPLSQQQTS LPSAQSKY+KVWEGNLSGQRQGQPVFITRL
Sbjct: 502 SQQGQPGMQPVGVNSTSANMPLSQQQTSGALPSAQSKYVKVWEGNLSGQRQGQPVFITRL 561
Query: 726 EGYRSASASESLAANW 773
EGYRSASASESLAANW
Sbjct: 562 EGYRSASASESLAANW 577
>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
Length = 827
Score = 274 bits (701), Expect = 2e-71
Identities = 161/265 (60%), Positives = 182/265 (68%), Gaps = 9/265 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQ-----ALAGGTSIGLQSMGGTPXXXXXX 170
KP VSG++Q+LRPV AAANV ILN+++QARQ AL+GGTSIGLQSMGGT
Sbjct: 346 KPIVSGISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMS 405
Query: 171 XXXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
VPA+QTV SSGQS V++ITGS LAG+ Q QN NS
Sbjct: 406 NMISSGMASSVPATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNS 465
Query: 342 NISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAG 521
N+ ISQPLSN QGGVSM GQTVPG+SQGNLPG QM+ SG GMNQNM+SGLG +G+ SG G
Sbjct: 466 NLGISQPLSNLQGGVSM-GQTVPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTG 524
Query: 522 TXXXXXXXXXXXXXXXXXXXVNSTAA-NMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQ 698
T VN+ AA NMPL QQ TS + +AQSKY+KVWEGNLSGQRQ
Sbjct: 525 TMIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQ-TSGAMQTAQSKYVKVWEGNLSGQRQ 583
Query: 699 GQPVFITRLEGYRSASASESLAANW 773
GQPVFITRLEGYRSASASESLAANW
Sbjct: 584 GQPVFITRLEGYRSASASESLAANW 608
>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 248 bits (634), Expect = 1e-63
Identities = 149/265 (56%), Positives = 171/265 (64%), Gaps = 9/265 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQ-----ALAGGTSIGLQSMGGTPXXXXXX 170
KP VSG++Q+LRPV AAANV ILN+++QARQ AL+GGTSIGLQSMGGT
Sbjct: 346 KPIVSGISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMS 405
Query: 171 XXXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
VPA+QTV SSGQS V++ITGS LAG+ Q QN NS
Sbjct: 406 NMISSGMASSVPATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNS 465
Query: 342 NISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAG 521
N+ ISQPL +PG+SQGNLPG QM+ SG GMNQNM+SGLG +G+ SG G
Sbjct: 466 NLGISQPL-------------IPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTG 512
Query: 522 TXXXXXXXXXXXXXXXXXXXVNSTAA-NMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQ 698
T VN+ AA NMPL QQ TS + +AQSKY+KVWEGNLSGQRQ
Sbjct: 513 TMIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQ-TSGAMQTAQSKYVKVWEGNLSGQRQ 571
Query: 699 GQPVFITRLEGYRSASASESLAANW 773
GQPVFITRLEGYRSASASESLAANW
Sbjct: 572 GQPVFITRLEGYRSASASESLAANW 596
>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X2 [Citrus sinensis]
Length = 829
Score = 244 bits (622), Expect = 3e-62
Identities = 149/265 (56%), Positives = 172/265 (64%), Gaps = 9/265 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQ-----ALAGGTSIGLQSMGGTPXXXXXX 170
KP VSGM+Q LRP+A AAANV ILN+++QARQ AL GGTSIGLQSMG TP
Sbjct: 344 KPLVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMS 403
Query: 171 XXXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
VP SQ V SS QSG+T+I GS L G+ Q QN GNS
Sbjct: 404 NMISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNS 463
Query: 342 NISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAG 521
N SISQP+ QGG SM GQ+V G+SQGN G QM+ +G MNQNM+SGLG +G+ SG G
Sbjct: 464 NPSISQPMGTLQGGASM-GQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTG 521
Query: 522 TXXXXXXXXXXXXXXXXXXXVNS-TAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQ 698
T VN+ TA NM LSQQ TS+ L S+QSKY+KVWEG+LSGQRQ
Sbjct: 522 TMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQ-TSSALHSSQSKYVKVWEGSLSGQRQ 580
Query: 699 GQPVFITRLEGYRSASASESLAANW 773
GQPVFIT+LEGYRSASASE+LAANW
Sbjct: 581 GQPVFITKLEGYRSASASETLAANW 605
>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 25-like isoform
X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
hypothetical protein CICLE_v10030710mg [Citrus
clementina]
Length = 830
Score = 244 bits (622), Expect = 3e-62
Identities = 149/265 (56%), Positives = 172/265 (64%), Gaps = 9/265 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQ-----ALAGGTSIGLQSMGGTPXXXXXX 170
KP VSGM+Q LRP+A AAANV ILN+++QARQ AL GGTSIGLQSMG TP
Sbjct: 345 KPLVSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMS 404
Query: 171 XXXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
VP SQ V SS QSG+T+I GS L G+ Q QN GNS
Sbjct: 405 NMISSGMASSVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNS 464
Query: 342 NISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAG 521
N SISQP+ QGG SM GQ+V G+SQGN G QM+ +G MNQNM+SGLG +G+ SG G
Sbjct: 465 NPSISQPMGTLQGGASM-GQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTG 522
Query: 522 TXXXXXXXXXXXXXXXXXXXVNS-TAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQ 698
T VN+ TA NM LSQQ TS+ L S+QSKY+KVWEG+LSGQRQ
Sbjct: 523 TMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQ-TSSALHSSQSKYVKVWEGSLSGQRQ 581
Query: 699 GQPVFITRLEGYRSASASESLAANW 773
GQPVFIT+LEGYRSASASE+LAANW
Sbjct: 582 GQPVFITKLEGYRSASASETLAANW 606
>ref|XP_002529152.1| conserved hypothetical protein [Ricinus communis]
gi|223531431|gb|EEF33265.1| conserved hypothetical
protein [Ricinus communis]
Length = 561
Score = 242 bits (617), Expect = 1e-61
Identities = 145/260 (55%), Positives = 169/260 (65%), Gaps = 9/260 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQ-----ALAGGTSIGLQSMGGTPXXXXXX 170
KPTVSGM S+RPV AANV ILN+++QARQ AL GGTSIGL S+ TP
Sbjct: 304 KPTVSGMPHSVRPVPPGAANVSILNNLSQARQVMNSAALTGGTSIGLPSINQTPVAMHMS 363
Query: 171 XXXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
VPA+QTV SSGQ+G+T+ITGS L G+ Q N GNS
Sbjct: 364 NMISSGMASSVPAAQTVFSSGQTGITSITGSGTLTGTTQIAPNSGLGSFTSTTTNVSGNS 423
Query: 342 NISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAG 521
N+ +SQP+ N Q GVSM GQ+VPG+SQGNL G QM+ SG GM+QNM+SGLG + + SGA
Sbjct: 424 NLGMSQPMGNLQAGVSM-GQSVPGMSQGNLSGAQMVQSGIGMSQNMMSGLGPSVVSSGAS 482
Query: 522 TXXXXXXXXXXXXXXXXXXXVNS-TAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQ 698
T VN+ +AANMPLSQQ SA L SAQSKY+KVWEGNLSGQRQ
Sbjct: 483 TMIPTPGMGQPAQTGIQSLGVNNNSAANMPLSQQTASA-LQSAQSKYVKVWEGNLSGQRQ 541
Query: 699 GQPVFITRLEGYRSASASES 758
GQPVFITRLEGYRS SASE+
Sbjct: 542 GQPVFITRLEGYRSGSASET 561
>gb|EOY02124.1| Phytochrome and flowering time regulatory protein isoform 2
[Theobroma cacao]
Length = 860
Score = 238 bits (607), Expect = 2e-60
Identities = 149/264 (56%), Positives = 172/264 (65%), Gaps = 8/264 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQAR----QALAGGTSIGLQSMGGTPXXXXXXX 173
KP+VSGMTQ LRPV AA NV ILN+++QAR AL GGTSIGL SMG TP
Sbjct: 336 KPSVSGMTQPLRPVPPAA-NVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSN 394
Query: 174 XXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNSN 344
VP +QTV SSGQS +T++TGS L G+ Q N NSN
Sbjct: 395 MISSGMASSVPPAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSN 454
Query: 345 ISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAGT 524
I +SQP+ N Q GVSM GQ+VPG+SQGN G QM+ SG GM+QNM SGLG + + SG GT
Sbjct: 455 IGMSQPMGNVQSGVSM-GQSVPGMSQGNHSGAQMVQSGVGMSQNM-SGLGPSTVSSGTGT 512
Query: 525 XXXXXXXXXXXXXXXXXXXV-NSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQG 701
V NS+AA+MPLSQQ TS+ L SAQSKY+KVWEGNLSGQRQG
Sbjct: 513 MFPIPGMSQQVQSGMQTLGVSNSSAASMPLSQQ-TSSALQSAQSKYVKVWEGNLSGQRQG 571
Query: 702 QPVFITRLEGYRSASASESLAANW 773
QPVFITRLEGYRSASASE+LAA+W
Sbjct: 572 QPVFITRLEGYRSASASETLAAHW 595
>gb|EOY02123.1| Phytochrome and flowering time regulatory protein isoform 1
[Theobroma cacao]
Length = 871
Score = 238 bits (607), Expect = 2e-60
Identities = 149/264 (56%), Positives = 172/264 (65%), Gaps = 8/264 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQAR----QALAGGTSIGLQSMGGTPXXXXXXX 173
KP+VSGMTQ LRPV AA NV ILN+++QAR AL GGTSIGL SMG TP
Sbjct: 347 KPSVSGMTQPLRPVPPAA-NVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSN 405
Query: 174 XXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNSN 344
VP +QTV SSGQS +T++TGS L G+ Q N NSN
Sbjct: 406 MISSGMASSVPPAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSN 465
Query: 345 ISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAGT 524
I +SQP+ N Q GVSM GQ+VPG+SQGN G QM+ SG GM+QNM SGLG + + SG GT
Sbjct: 466 IGMSQPMGNVQSGVSM-GQSVPGMSQGNHSGAQMVQSGVGMSQNM-SGLGPSTVSSGTGT 523
Query: 525 XXXXXXXXXXXXXXXXXXXV-NSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQG 701
V NS+AA+MPLSQQ TS+ L SAQSKY+KVWEGNLSGQRQG
Sbjct: 524 MFPIPGMSQQVQSGMQTLGVSNSSAASMPLSQQ-TSSALQSAQSKYVKVWEGNLSGQRQG 582
Query: 702 QPVFITRLEGYRSASASESLAANW 773
QPVFITRLEGYRSASASE+LAA+W
Sbjct: 583 QPVFITRLEGYRSASASETLAAHW 606
>ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X3 [Glycine max]
Length = 725
Score = 227 bits (578), Expect = 4e-57
Identities = 140/264 (53%), Positives = 165/264 (62%), Gaps = 8/264 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQ-----ALAGGTSIGLQSMGGTPXXXXXX 170
KPTVS + LRPV A ANV ILN+++ ARQ AL+GGTS+GL SM TP
Sbjct: 240 KPTVSMLP--LRPVNPAQANVNILNNLSIARQVMNSAALSGGTSMGLPSMSQTPVAMHMS 297
Query: 171 XXXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
VPA+Q V SSGQSG+T++T S PL G Q QN +S
Sbjct: 298 NMISSGMTSSVPAAQNVFSSGQSGITSMTSSGPLTGPAQVGQNSGLGSLTSNTSNLSSSS 357
Query: 342 NISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAG 521
NI ISQPL N QG VSM GQ V G+SQGNL G QM+ G MNQN++SGLG + + SG G
Sbjct: 358 NIGISQPLGNLQGAVSM-GQQVSGMSQGNLSGAQMVQGGVNMNQNVMSGLGQSVVSSGTG 416
Query: 522 TXXXXXXXXXXXXXXXXXXXVNSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQG 701
T VN+ A NMPLSQQ TS + SAQSKY+KVWEG+LSGQRQG
Sbjct: 417 TMIPTPGMSQPVQSGMQPL-VNNAATNMPLSQQ-TSGGMQSAQSKYVKVWEGSLSGQRQG 474
Query: 702 QPVFITRLEGYRSASASESLAANW 773
QPVFIT+LEGYR++SASE+LAANW
Sbjct: 475 QPVFITKLEGYRNSSASETLAANW 498
>ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X1 [Glycine max]
gi|571434654|ref|XP_006573256.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 25-like isoform
X2 [Glycine max]
Length = 832
Score = 227 bits (578), Expect = 4e-57
Identities = 140/264 (53%), Positives = 165/264 (62%), Gaps = 8/264 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQ-----ALAGGTSIGLQSMGGTPXXXXXX 170
KPTVS + LRPV A ANV ILN+++ ARQ AL+GGTS+GL SM TP
Sbjct: 347 KPTVSMLP--LRPVNPAQANVNILNNLSIARQVMNSAALSGGTSMGLPSMSQTPVAMHMS 404
Query: 171 XXXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
VPA+Q V SSGQSG+T++T S PL G Q QN +S
Sbjct: 405 NMISSGMTSSVPAAQNVFSSGQSGITSMTSSGPLTGPAQVGQNSGLGSLTSNTSNLSSSS 464
Query: 342 NISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAG 521
NI ISQPL N QG VSM GQ V G+SQGNL G QM+ G MNQN++SGLG + + SG G
Sbjct: 465 NIGISQPLGNLQGAVSM-GQQVSGMSQGNLSGAQMVQGGVNMNQNVMSGLGQSVVSSGTG 523
Query: 522 TXXXXXXXXXXXXXXXXXXXVNSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQG 701
T VN+ A NMPLSQQ TS + SAQSKY+KVWEG+LSGQRQG
Sbjct: 524 TMIPTPGMSQPVQSGMQPL-VNNAATNMPLSQQ-TSGGMQSAQSKYVKVWEGSLSGQRQG 581
Query: 702 QPVFITRLEGYRSASASESLAANW 773
QPVFIT+LEGYR++SASE+LAANW
Sbjct: 582 QPVFITKLEGYRNSSASETLAANW 605
>gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus vulgaris]
Length = 863
Score = 226 bits (577), Expect = 5e-57
Identities = 141/264 (53%), Positives = 165/264 (62%), Gaps = 8/264 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQ-----ALAGGTSIGLQSMGGTPXXXXXX 170
KPTVS M QSLRPV ANV ILN+++QARQ AL+GGTS+GL SMG TP
Sbjct: 349 KPTVS-MLQSLRPVNPTQANVSILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMS 407
Query: 171 XXXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
VPA+Q V SGQSG+T+IT S PL+ Q QN +S
Sbjct: 408 NMISSGMTSSVPAAQNVFPSGQSGITSITSSGPLSVPAQVGQNPGLGSLTSNTSNLSSSS 467
Query: 342 NISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAG 521
NI ISQPL N QG VSM GQ G+SQGNL G QM+ G MNQN +S LG++ + SG G
Sbjct: 468 NIGISQPLGNLQGAVSM-GQQASGMSQGNLSGPQMVQGGVPMNQNAMSALGSSVVSSGNG 526
Query: 522 TXXXXXXXXXXXXXXXXXXXVNSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQG 701
T N+ AANMPLSQQ TS + SAQSKY+KVWEG+LSGQRQG
Sbjct: 527 TMIPTPGMSQQVQSGMQALG-NNAAANMPLSQQ-TSGGMQSAQSKYVKVWEGSLSGQRQG 584
Query: 702 QPVFITRLEGYRSASASESLAANW 773
QPVFIT+LEGYR++SASESLA+NW
Sbjct: 585 QPVFITKLEGYRNSSASESLASNW 608
>ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Glycine max]
Length = 877
Score = 226 bits (576), Expect = 7e-57
Identities = 140/264 (53%), Positives = 166/264 (62%), Gaps = 8/264 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQ-----ALAGGTSIGLQSMGGTPXXXXXX 170
KPTVS + LRPV ANV ILN+++QARQ AL+GGTS+GL SMG TP
Sbjct: 347 KPTVSMLP--LRPVNPVQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMS 404
Query: 171 XXXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
VPA+Q V SSGQSG+T++T S PL Q QN +S
Sbjct: 405 NMISSGMTSSVPAAQNVFSSGQSGITSMTSSGPLTVPAQVGQNSGLGSLTSNTSNLSSSS 464
Query: 342 NISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAG 521
NI ISQPL N QG VS+ GQ V G+SQGNL G QM+ G MNQN++SGLG + + SG G
Sbjct: 465 NIGISQPLGNLQGVVSI-GQQVSGMSQGNLSGAQMVQGGVSMNQNVMSGLGQSVVSSGTG 523
Query: 522 TXXXXXXXXXXXXXXXXXXXVNSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQG 701
T VN+ AANMPLSQQ TS + SAQSKY+KVWEG+LSGQRQG
Sbjct: 524 TMIPTPGMSQPVQSVMQPL-VNNAAANMPLSQQ-TSGGMQSAQSKYVKVWEGSLSGQRQG 581
Query: 702 QPVFITRLEGYRSASASESLAANW 773
QPVFIT+LEGYR++SASE+LAANW
Sbjct: 582 QPVFITKLEGYRNSSASETLAANW 605
>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus trichocarpa]
gi|222864996|gb|EEF02127.1| PHYTOCHROME AND FLOWERING
TIME 1 family protein [Populus trichocarpa]
Length = 796
Score = 220 bits (560), Expect = 5e-55
Identities = 133/265 (50%), Positives = 159/265 (60%), Gaps = 9/265 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQA-----LAGGTSIGLQSMGGTPXXXXXX 170
KP VS MTQS RP AAANV ILN+++QARQ L+GGTS+GL S+ T
Sbjct: 338 KPNVSVMTQSARPGPPAAANVSILNNISQARQVMNSAGLSGGTSLGLPSINQTSVAMHMS 397
Query: 171 XXXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
VPA+ TV SSGQ GV++ITGS L G+ Q N GNS
Sbjct: 398 NMISSGMASSVPAAPTVFSSGQPGVSSITGSGTLTGTTQIGPNSGLGSFTSATSNVSGNS 457
Query: 342 NIS-ISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGA 518
N+ ISQP+ N Q GVS+ GQ+ PG+SQGN+ G QM+ SG G N N +SGLG +G+ SG
Sbjct: 458 NLGRISQPMGNLQAGVSI-GQSAPGMSQGNISGAQMVQSGMGANPNTMSGLGPSGVSSGL 516
Query: 519 GTXXXXXXXXXXXXXXXXXXXVNSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQ 698
T N+ +A+ QQT+ L QSKY+KVWEGNLSGQRQ
Sbjct: 517 NTMIPTPGMSQQVQSGMQPLGANNNSADNLSMSQQTAGGLQPPQSKYVKVWEGNLSGQRQ 576
Query: 699 GQPVFITRLEGYRSASASESLAANW 773
GQPVFITRLEGYRSASASE+LAANW
Sbjct: 577 GQPVFITRLEGYRSASASETLAANW 601
>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Cucumis sativus]
Length = 858
Score = 214 bits (544), Expect = 3e-53
Identities = 131/263 (49%), Positives = 158/263 (60%), Gaps = 7/263 (2%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQAR----QALAGGTSIGLQSMGGTPXXXXXXX 173
KP V+G+ Q +R + A NV ILN+++QAR AL GGTSIGL SMG TP
Sbjct: 345 KPLVTGVPQPVRSLGPA--NVSILNNISQARVMSTAALNGGTSIGLPSMGQTPIAMHVSN 402
Query: 174 XXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNSN 344
VPA+Q V SSGQSG+T+I GS L+ Q N GN N
Sbjct: 403 MISSGMGSSVPAAQNVFSSGQSGMTSINGSSTLS---QVAPNSGISSLTSGNNNISGNPN 459
Query: 345 ISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAGT 524
I+ SQ + N QG VS+S Q+VPGISQGNL GTQ++ SG G++QN++S L G+ SG GT
Sbjct: 460 IATSQAVGNLQGSVSVS-QSVPGISQGNLAGTQVVQSGIGVSQNVMSNLTQPGVSSGNGT 518
Query: 525 XXXXXXXXXXXXXXXXXXXVNSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQGQ 704
+N+ AANMPL Q A AQSKY+K WEGNLSGQRQGQ
Sbjct: 519 MIPTPGMPQQVQNGMHSLGMNNAAANMPLPQHSAGALQQQAQSKYVKFWEGNLSGQRQGQ 578
Query: 705 PVFITRLEGYRSASASESLAANW 773
PVFITR+EGYRSASAS+ LAANW
Sbjct: 579 PVFITRMEGYRSASASDKLAANW 601
>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
gi|550332870|gb|EEE88812.2| hypothetical protein
POPTR_0008s11650g [Populus trichocarpa]
Length = 896
Score = 209 bits (532), Expect = 8e-52
Identities = 134/270 (49%), Positives = 160/270 (59%), Gaps = 14/270 (5%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQ-----ALAGGTSIGLQSMGGTPXXXXXX 170
KP VS TQS R AAANV ILN+++QARQ AL+GGTSIGL S+ T
Sbjct: 347 KPNVSVTTQSARSAPPAAANVNILNNLSQARQVMNSAALSGGTSIGLPSINQTSVAMHMS 406
Query: 171 XXXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
VPA+QTV SSGQ GV++ITGS L G+ Q N GNS
Sbjct: 407 SMISSGMTSSVPAAQTVFSSGQPGVSSITGSGNLTGTTQITPNSGLGSFTSATSNMPGNS 466
Query: 342 NIS-ISQPLSNSQGGVSMSGQTVPGISQG----NLPGTQMMSSGTGMNQNMLSGLGATGM 506
N+ ISQP+ N GVS+S + G+ + G QM+ SG G N N +SGLGA+G+
Sbjct: 467 NLGGISQPMGNLHAGVSISQSAMSGLGTNPNTMSGSGAQMVQSGMGANPNTMSGLGASGV 526
Query: 507 PSGAGTXXXXXXXXXXXXXXXXXXXVNS-TAANMPLSQQQTSATLPSAQSKYMKVWEGNL 683
SG+ T N+ +AAN+PLSQQ T+ L AQSKY+KVWEGNL
Sbjct: 527 SSGSNTMIPTPGMSQQVQSGMQPLGANNNSAANLPLSQQ-TAGGLQPAQSKYVKVWEGNL 585
Query: 684 SGQRQGQPVFITRLEGYRSASASESLAANW 773
SGQRQGQPVFITRLEGYRSASASE+LAANW
Sbjct: 586 SGQRQGQPVFITRLEGYRSASASETLAANW 615
>ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like, partial [Cucumis sativus]
Length = 595
Score = 202 bits (515), Expect = 8e-50
Identities = 126/257 (49%), Positives = 153/257 (59%), Gaps = 7/257 (2%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQAR----QALAGGTSIGLQSMGGTPXXXXXXX 173
KP V+G+ Q +R + A NV ILN+++QAR AL GGTSIGL SMG TP
Sbjct: 345 KPLVTGVPQPVRSLGPA--NVSILNNISQARVMSTAALNGGTSIGLPSMGQTPIAMHVSN 402
Query: 174 XXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNSN 344
VPA+Q V SSGQSG+T+I GS L+ Q N GN N
Sbjct: 403 MISSGMGSSVPAAQNVFSSGQSGMTSINGSSTLS---QVAPNSGISSLTSGNNNISGNPN 459
Query: 345 ISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAGT 524
I+ SQ + N QG VS+S Q+VPGISQGNL GTQ++ SG G++QN++S L G+ SG GT
Sbjct: 460 IATSQAVGNLQGSVSVS-QSVPGISQGNLAGTQVVQSGIGVSQNVMSNLTQPGVSSGNGT 518
Query: 525 XXXXXXXXXXXXXXXXXXXVNSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQGQ 704
+N+ AANMPL Q A AQSKY+K WEGNLSGQRQGQ
Sbjct: 519 MIPTPGMPQQVQNGMHSLGMNNAAANMPLPQHSAGALQQQAQSKYVKFWEGNLSGQRQGQ 578
Query: 705 PVFITRLEGYRSASASE 755
PVFITR+EGYRSASAS+
Sbjct: 579 PVFITRMEGYRSASASD 595
>ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Fragaria vesca subsp. vesca]
Length = 855
Score = 200 bits (509), Expect = 4e-49
Identities = 130/263 (49%), Positives = 158/263 (60%), Gaps = 7/263 (2%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQAR----QALAGGTSIGLQSMGGTPXXXXXXX 173
KP VSG+T LRPV + ILN+++QAR AL+GGTSIGLQ+MG P
Sbjct: 344 KPIVSGVTHQLRPVGS------ILNNISQARVMNSAALSGGTSIGLQNMGQNPMAMHVSN 397
Query: 174 XXXXXX---VPASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNSN 344
V A+Q V SS S T+T Q Q+ GNSN
Sbjct: 398 MISSGMASSVAAAQNVFSS--SAPHTLT---------QVPQSSGLNTFTSATSNVSGNSN 446
Query: 345 ISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAGT 524
+ +SQP+SN QGGVS+ GQ+VPG++Q NL G QM+ +G GMN NM+SG G+ G SG GT
Sbjct: 447 LGMSQPMSNLQGGVSI-GQSVPGMNQ-NLSGPQMVQNGIGMNPNMMSGHGSAGSSSGTGT 504
Query: 525 XXXXXXXXXXXXXXXXXXXVNSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQGQ 704
N+++ + PLSQQ TS+ L SAQSKY+KVWEGNLSGQRQGQ
Sbjct: 505 MIPTPGISQQAQSGIQSLGANNSSISNPLSQQ-TSSALQSAQSKYVKVWEGNLSGQRQGQ 563
Query: 705 PVFITRLEGYRSASASESLAANW 773
PVFITRLEGYRSASASE+LAANW
Sbjct: 564 PVFITRLEGYRSASASETLAANW 586
>gb|EXB38291.1| hypothetical protein L484_013924 [Morus notabilis]
Length = 1038
Score = 199 bits (505), Expect = 1e-48
Identities = 122/259 (47%), Positives = 155/259 (59%), Gaps = 3/259 (1%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQALAGGTSIGLQSMGGTPXXXXXXXXXXX 185
KP VS ++Q LRPV A ANV ILN++ Q + MG TP
Sbjct: 438 KPIVSSISQPLRPVGPAPANVNILNNLLAKHQVINSAAL----PMGQTPIGMHMSNMISN 493
Query: 186 XXVPAS--QTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNSNISISQ 359
++ Q +L SGQ +T++ GS PL Q Q GNSNI +SQ
Sbjct: 494 GMASSTPAQNILPSGQPAITSLPGSGPLT---QVTQTPGLSTFSAATSNVSGNSNIGVSQ 550
Query: 360 PLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAGTXXXXX 539
P++N QGGVSM GQ+VP +SQGN+ G QM+ +G GMNQNM+SGLG + + SG GT
Sbjct: 551 PMNNLQGGVSM-GQSVPTMSQGNISGAQMVQTGMGMNQNMISGLGQSVVSSGTGTMMPTP 609
Query: 540 XXXXXXXXXXXXXXVNS-TAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQGQPVFI 716
VN+ +AA++P+SQQ ++T P A SKY+KVWEGNLSGQRQGQPVFI
Sbjct: 610 GMSQQVQSGMQPLGVNNNSAASIPMSQQ--ASTAPQA-SKYVKVWEGNLSGQRQGQPVFI 666
Query: 717 TRLEGYRSASASESLAANW 773
TRLEGYR+A+ASE+LAANW
Sbjct: 667 TRLEGYRNATASETLAANW 685
>ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X1 [Cicer arietinum]
Length = 818
Score = 197 bits (501), Expect = 3e-48
Identities = 124/264 (46%), Positives = 150/264 (56%), Gaps = 8/264 (3%)
Frame = +3
Query: 6 KPTVSGMTQSLRPVAAAAANVRILNDVAQARQ-----ALAGGTSIGLQSMGGTPXXXXXX 170
KP VS M Q LRPV A N ILN+++QARQ AL+GGTS+GL SMG TP
Sbjct: 348 KPIVS-MLQPLRPVNPAQVNGNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMS 406
Query: 171 XXXXXXXV---PASQTVLSSGQSGVTTITGSVPLAGSGQNMQNXXXXXXXXXXXXXXGNS 341
P Q V SSG +T+IT S L Q QN +S
Sbjct: 407 NMISSATTSSGPTGQNVFSSGPPVITSITSSGSLTAPAQVAQNTGLASLTSATSNLSSSS 466
Query: 342 NISISQPLSNSQGGVSMSGQTVPGISQGNLPGTQMMSSGTGMNQNMLSGLGATGMPSGAG 521
N ISQ L+N QG VSM GQ G++ GNL G QM+ G MNQN+++GLG + + SG G
Sbjct: 467 NTGISQSLANLQGAVSM-GQQASGMNPGNLSGAQMVQGGVNMNQNVMNGLGQSVVSSGNG 525
Query: 522 TXXXXXXXXXXXXXXXXXXXVNSTAANMPLSQQQTSATLPSAQSKYMKVWEGNLSGQRQG 701
N+ +AN+PLSQQ SAQSKY++VWEG+LSGQRQG
Sbjct: 526 AMIPTPGMPQQVQSGMQPLVNNAASANLPLSQQT------SAQSKYIRVWEGSLSGQRQG 579
Query: 702 QPVFITRLEGYRSASASESLAANW 773
QPVFIT+LEGYRS+SASE+LAANW
Sbjct: 580 QPVFITKLEGYRSSSASETLAANW 603