BLASTX nr result
ID: Atropa21_contig00021038
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00021038 (859 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containi... 290 5e-76 ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containi... 263 5e-68 ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi... 244 4e-62 >ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1, chloroplastic-like isoform X2 [Solanum tuberosum] Length = 1109 Score = 290 bits (742), Expect = 5e-76 Identities = 190/364 (52%), Positives = 204/364 (56%), Gaps = 93/364 (25%) Frame = -3 Query: 836 SCSPISSSLGPRRIQVLAGSTRYLRPHGGLRSRRRCRYIGAQ----NSRFVLKASLDSQX 669 SCSPISSSL PRR Q L+GST LRP G L SRRRCR IG Q SRFVL+ASLDSQ Sbjct: 16 SCSPISSSLVPRR-QFLSGSTHSLRPPG-LHSRRRCRNIGFQFGSNTSRFVLRASLDSQT 73 Query: 668 XXXXXXXXXXXALTIVFFEFSKRNTNANAKFKEENL------------------------ 561 LT+VF EFSKRNTNANAKFKEE Sbjct: 74 VVFASVVTISA-LTVVFLEFSKRNTNANAKFKEEEKSVKIQMKEVTKVSNEHEDGGTDVL 132 Query: 560 --QGTKMSNILTTEEVR------------------APGPHANTESDAVPSSFVAESNNIY 441 GT + T + A P+A+TESDAVPSSFVAE NNIY Sbjct: 133 QHDGTDLIQTFVTNNIESVDTNQLAPSSNGSLTLGASVPNAHTESDAVPSSFVAELNNIY 192 Query: 440 ---------------------------------------------LQEHLHETKMSNILT 396 LQEHLHETKMSNILT Sbjct: 193 LQENLRMTKMSNILTTEEVREPEPIAHTESDAVPSSFVEESKNICLQEHLHETKMSNILT 252 Query: 395 TEEVSSERSVDWFPAINIDKRIEETMKMDPELMRKDGCKKAHKLVAEDEVNIHNLIFSDS 216 TEEVSSERSV FPAINID R E+T KMD ELM KDGCKKAHK VAEDEV IHNLIF DS Sbjct: 253 TEEVSSERSVALFPAINIDNRPEKTKKMDQELMTKDGCKKAHKFVAEDEVTIHNLIFRDS 312 Query: 215 ARKELYSFFEASTKGLNSQEALTSHTSLQHIGVFSAPSKVSSVQAEAFEEKRPHDIIKKG 36 R++LYSFFEAS+K LN Q+ALTSH SLQ IG FS SKV SV+AE FEEKR H K+G Sbjct: 313 TREDLYSFFEASSKSLNGQDALTSHASLQGIGAFSPASKVFSVRAEDFEEKRSHGCYKEG 372 Query: 35 HSTK 24 K Sbjct: 373 PFNK 376 >ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1, chloroplastic-like isoform X1 [Solanum tuberosum] Length = 1140 Score = 263 bits (673), Expect = 5e-68 Identities = 140/188 (74%), Positives = 151/188 (80%) Frame = -3 Query: 587 NAKFKEENLQGTKMSNILTTEEVRAPGPHANTESDAVPSSFVAESNNIYLQEHLHETKMS 408 N + +ENL+ TKMSNILTTEEVR P P A+TESDAVPSSFV ES NI LQEHLHETKMS Sbjct: 220 NNIYLQENLRMTKMSNILTTEEVREPEPIAHTESDAVPSSFVEESKNICLQEHLHETKMS 279 Query: 407 NILTTEEVSSERSVDWFPAINIDKRIEETMKMDPELMRKDGCKKAHKLVAEDEVNIHNLI 228 NILTTEEVSSERSV FPAINID R E+T KMD ELM KDGCKKAHK VAEDEV IHNLI Sbjct: 280 NILTTEEVSSERSVALFPAINIDNRPEKTKKMDQELMTKDGCKKAHKFVAEDEVTIHNLI 339 Query: 227 FSDSARKELYSFFEASTKGLNSQEALTSHTSLQHIGVFSAPSKVSSVQAEAFEEKRPHDI 48 F DS R++LYSFFEAS+K LN Q+ALTSH SLQ IG FS SKV SV+AE FEEKR H Sbjct: 340 FRDSTREDLYSFFEASSKSLNGQDALTSHASLQGIGAFSPASKVFSVRAEDFEEKRSHGC 399 Query: 47 IKKGHSTK 24 K+G K Sbjct: 400 YKEGPFNK 407 Score = 95.5 bits (236), Expect(2) = 1e-17 Identities = 61/93 (65%), Positives = 64/93 (68%), Gaps = 4/93 (4%) Frame = -3 Query: 836 SCSPISSSLGPRRIQVLAGSTRYLRPHGGLRSRRRCRYIGAQ----NSRFVLKASLDSQX 669 SCSPISSSL PRR Q L+GST LRP G L SRRRCR IG Q SRFVL+ASLDSQ Sbjct: 16 SCSPISSSLVPRR-QFLSGSTHSLRPPG-LHSRRRCRNIGFQFGSNTSRFVLRASLDSQT 73 Query: 668 XXXXXXXXXXXALTIVFFEFSKRNTNANAKFKE 570 LT+VF EFSKRNTNANAKFKE Sbjct: 74 VVFASVVTISA-LTVVFLEFSKRNTNANAKFKE 105 Score = 21.2 bits (43), Expect(2) = 1e-17 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -1 Query: 859 IFYPKPHNLVLQS 821 IF PKPH L L S Sbjct: 4 IFSPKPHTLSLLS 16 >ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830, chloroplastic-like [Solanum lycopersicum] Length = 1182 Score = 244 bits (622), Expect = 4e-62 Identities = 130/184 (70%), Positives = 144/184 (78%) Frame = -3 Query: 590 ANAKFKEENLQGTKMSNILTTEEVRAPGPHANTESDAVPSSFVAESNNIYLQEHLHETKM 411 +N + +ENL+ TKMSNILTTEEVR P P A+TESDAVPSSF+ ES NI LQEHLHETKM Sbjct: 261 SNNIYLQENLRTTKMSNILTTEEVREPEPIAHTESDAVPSSFMEESKNINLQEHLHETKM 320 Query: 410 SNILTTEEVSSERSVDWFPAINIDKRIEETMKMDPELMRKDGCKKAHKLVAEDEVNIHNL 231 SNILTTEEVSSERSV FP INID R E+T MD ELM KD KKAH+ VAEDEV IHNL Sbjct: 321 SNILTTEEVSSERSVALFPTINIDNRTEKTKIMDQELMMKDELKKAHRFVAEDEVIIHNL 380 Query: 230 IFSDSARKELYSFFEASTKGLNSQEALTSHTSLQHIGVFSAPSKVSSVQAEAFEEKRPHD 51 IF DS R++LYSFF AS+K LN Q+ALTSH S Q IG FS PSK SV+AE FEEKR H Sbjct: 381 IFRDSTREDLYSFFGASSKSLNGQDALTSHASRQGIGTFSPPSKAFSVRAEDFEEKRSHG 440 Query: 50 IIKK 39 K+ Sbjct: 441 CYKE 444 Score = 95.5 bits (236), Expect = 2e-17 Identities = 61/93 (65%), Positives = 64/93 (68%), Gaps = 4/93 (4%) Frame = -3 Query: 836 SCSPISSSLGPRRIQVLAGSTRYLRPHGGLRSRRRCRYIGAQ----NSRFVLKASLDSQX 669 SCSPISSSL PRR Q L+GST LRP G L SRRRCR IG Q SRFVL+ASLDSQ Sbjct: 13 SCSPISSSLVPRR-QFLSGSTHSLRPPG-LHSRRRCRNIGFQFGGNTSRFVLRASLDSQT 70 Query: 668 XXXXXXXXXXXALTIVFFEFSKRNTNANAKFKE 570 LT+VF EFSKRNTNANAKFKE Sbjct: 71 VVFASVVTISA-LTVVFLEFSKRNTNANAKFKE 102 Score = 68.9 bits (167), Expect = 2e-09 Identities = 33/41 (80%), Positives = 38/41 (92%) Frame = -3 Query: 506 PHANTESDAVPSSFVAESNNIYLQEHLHETKMSNILTTEEV 384 P+ +TESDAVPSSFVA+SNNIYLQE++ TKMSNILTTEEV Sbjct: 199 PNEHTESDAVPSSFVADSNNIYLQENIQTTKMSNILTTEEV 239