BLASTX nr result
ID: Atropa21_contig00020916
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00020916
(473 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subun... 263 2e-68
ref|XP_006356601.1| PREDICTED: cleavage stimulation factor subun... 262 3e-68
ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subun... 262 3e-68
ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subun... 243 2e-62
ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun... 191 7e-47
ref|XP_004300057.1| PREDICTED: cleavage stimulation factor subun... 174 8e-42
ref|XP_006481295.1| PREDICTED: cleavage stimulation factor subun... 166 2e-39
ref|XP_006429695.1| hypothetical protein CICLE_v10011123mg [Citr... 166 3e-39
ref|XP_002303484.1| suppressor of forked family protein [Populus... 165 5e-39
ref|XP_006604052.1| PREDICTED: cleavage stimulation factor subun... 161 7e-38
gb|ESW23484.1| hypothetical protein PHAVU_004G051000g [Phaseolus... 161 9e-38
gb|EMJ28185.1| hypothetical protein PRUPE_ppa002118mg [Prunus pe... 161 9e-38
ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 158 6e-37
ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subun... 158 6e-37
ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 158 8e-37
gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus nota... 157 1e-36
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat... 157 2e-36
gb|EOY19421.1| Tetratricopeptide repeat-like superfamily protein... 154 9e-36
ref|XP_004968632.1| PREDICTED: cleavage stimulation factor subun... 152 3e-35
gb|EOY19420.1| Tetratricopeptide repeat-like superfamily protein... 152 3e-35
>ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 1
[Solanum lycopersicum]
Length = 741
Score = 263 bits (671), Expect = 2e-68
Identities = 133/157 (84%), Positives = 135/157 (85%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSL DVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKK DKPTLGIEAGSADKT+SG
Sbjct: 481 LESSLHDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKPDKPTLGIEAGSADKTTSG 540
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXXDI 360
VSSNTNPPAKVV PDTSKMTVYDPRQ+PGPA LA PSASGT DI
Sbjct: 541 VSSNTNPPAKVVYPDTSKMTVYDPRQIPGPAALAAPSASGTLPYSGPFSSNGPPIALNDI 600
Query: 361 LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI
Sbjct: 601 LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 637
>ref|XP_006356601.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X4
[Solanum tuberosum]
Length = 601
Score = 262 bits (670), Expect = 3e-68
Identities = 132/157 (84%), Positives = 135/157 (85%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSL DVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKK DKPTLGIEAGSADKT+SG
Sbjct: 341 LESSLHDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKPDKPTLGIEAGSADKTTSG 400
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXXDI 360
VSSNTNPPAKVV PDTSKMTVYDPRQ+PGPA LA PSASGT DI
Sbjct: 401 VSSNTNPPAKVVYPDTSKMTVYDPRQIPGPAALAAPSASGTLPYSGPFSSNGPPNALNDI 460
Query: 361 LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
LKSLPPAFAAF+ANLPAVEGPSPDADFVISVCLQSNI
Sbjct: 461 LKSLPPAFAAFIANLPAVEGPSPDADFVISVCLQSNI 497
>ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X1
[Solanum tuberosum] gi|565380421|ref|XP_006356599.1|
PREDICTED: cleavage stimulation factor subunit 3-like
isoform X2 [Solanum tuberosum]
gi|565380423|ref|XP_006356600.1| PREDICTED: cleavage
stimulation factor subunit 3-like isoform X3 [Solanum
tuberosum]
Length = 741
Score = 262 bits (670), Expect = 3e-68
Identities = 132/157 (84%), Positives = 135/157 (85%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSL DVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKK DKPTLGIEAGSADKT+SG
Sbjct: 481 LESSLHDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKPDKPTLGIEAGSADKTTSG 540
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXXDI 360
VSSNTNPPAKVV PDTSKMTVYDPRQ+PGPA LA PSASGT DI
Sbjct: 541 VSSNTNPPAKVVYPDTSKMTVYDPRQIPGPAALAAPSASGTLPYSGPFSSNGPPNALNDI 600
Query: 361 LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
LKSLPPAFAAF+ANLPAVEGPSPDADFVISVCLQSNI
Sbjct: 601 LKSLPPAFAAFIANLPAVEGPSPDADFVISVCLQSNI 637
>ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 2
[Solanum lycopersicum]
Length = 734
Score = 243 bits (620), Expect = 2e-62
Identities = 126/157 (80%), Positives = 128/157 (81%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSL DVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKK DKPTL DKT+SG
Sbjct: 481 LESSLHDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKPDKPTL-------DKTTSG 533
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXXDI 360
VSSNTNPPAKVV PDTSKMTVYDPRQ+PGPA LA PSASGT DI
Sbjct: 534 VSSNTNPPAKVVYPDTSKMTVYDPRQIPGPAALAAPSASGTLPYSGPFSSNGPPIALNDI 593
Query: 361 LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI
Sbjct: 594 LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 630
>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
gi|297736046|emb|CBI24084.3| unnamed protein product
[Vitis vinifera]
Length = 769
Score = 191 bits (486), Expect = 7e-47
Identities = 99/164 (60%), Positives = 114/164 (69%), Gaps = 7/164 (4%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSLQDVVSRYSFMDLWPCSS DLDHLARQEWLA+NINKK +K + GS +K++SG
Sbjct: 500 LESSLQDVVSRYSFMDLWPCSSRDLDHLARQEWLAKNINKKVEKSAILKGVGSTEKSASG 559
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPL------AVPSASGTXXXXXXXXXXXXX 342
++N+NP KV PDTS+M VYDPRQ PG L +PS SGT
Sbjct: 560 FTTNSNPATKVFYPDTSQMVVYDPRQKPGTGALPSTTAPVLPSISGTLSNPSVPMVSSRP 619
Query: 343 XXXXD-ILKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
D ILKS PPA AF+ANLPAVEGPSPD D V+S+CLQSN+
Sbjct: 620 ANPLDEILKSTPPALVAFIANLPAVEGPSPDVDVVLSICLQSNV 663
>ref|XP_004300057.1| PREDICTED: cleavage stimulation factor subunit 3-like [Fragaria
vesca subsp. vesca]
Length = 762
Score = 174 bits (442), Expect = 8e-42
Identities = 89/157 (56%), Positives = 112/157 (71%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSLQ+VVSRYSFMDLWPCS+ DLDHLARQEWLA+NINKK +K T+ + ADK S+G
Sbjct: 497 LESSLQEVVSRYSFMDLWPCSTKDLDHLARQEWLAKNINKKAEKSTMLSGSELADKGSTG 556
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXXDI 360
+ SN++ AKVV PDT++M +YDPRQ PG A + + +AS +I
Sbjct: 557 LISNSSVSAKVVYPDTNQMVIYDPRQKPGVAGV-LTAASTLSNPVVAAVGGQTMSAFDEI 615
Query: 361 LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
LK PPA AF+ANLP +EGP+PD D V+S+CLQS+I
Sbjct: 616 LKVTPPALVAFLANLPIIEGPTPDVDIVLSICLQSDI 652
>ref|XP_006481295.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X2
[Citrus sinensis]
Length = 743
Score = 166 bits (421), Expect = 2e-39
Identities = 85/157 (54%), Positives = 102/157 (64%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LE SLQDVVSRYSFMDLWPCSS DLDHL RQEWL +NINKK DK L G DK SG
Sbjct: 497 LEDSLQDVVSRYSFMDLWPCSSKDLDHLVRQEWLVKNINKKVDKSALSNGPGIVDKGPSG 556
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXXDI 360
++SN+ A V+ PDTS+M +YDPRQ PG + P ++
Sbjct: 557 LTSNSTTSATVIYPDTSQMVIYDPRQKPGGGGIMNP--------------------FDEM 596
Query: 361 LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
LK+ PA AF+ANLPAVEGP+P+ D V+S+CLQS+I
Sbjct: 597 LKAASPAIFAFLANLPAVEGPTPNVDIVLSICLQSDI 633
>ref|XP_006429695.1| hypothetical protein CICLE_v10011123mg [Citrus clementina]
gi|568855400|ref|XP_006481294.1| PREDICTED: cleavage
stimulation factor subunit 3-like isoform X1 [Citrus
sinensis] gi|557531752|gb|ESR42935.1| hypothetical
protein CICLE_v10011123mg [Citrus clementina]
Length = 770
Score = 166 bits (420), Expect = 3e-39
Identities = 87/164 (53%), Positives = 106/164 (64%), Gaps = 7/164 (4%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LE SLQDVVSRYSFMDLWPCSS DLDHL RQEWL +NINKK DK L G DK SG
Sbjct: 497 LEDSLQDVVSRYSFMDLWPCSSKDLDHLVRQEWLVKNINKKVDKSALSNGPGIVDKGPSG 556
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPG----PAPLAVPSAS---GTXXXXXXXXXXXX 339
++SN+ A V+ PDTS+M +YDPRQ PG P+ A ++S
Sbjct: 557 LTSNSTTSATVIYPDTSQMVIYDPRQKPGIGISPSTTATGASSALNALSNPMVATGGGGI 616
Query: 340 XXXXXDILKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
++LK+ PA AF+ANLPAVEGP+P+ D V+S+CLQS+I
Sbjct: 617 MNPFDEMLKAASPAIFAFLANLPAVEGPTPNVDIVLSICLQSDI 660
>ref|XP_002303484.1| suppressor of forked family protein [Populus trichocarpa]
gi|222840916|gb|EEE78463.1| suppressor of forked family
protein [Populus trichocarpa]
Length = 769
Score = 165 bits (418), Expect = 5e-39
Identities = 82/159 (51%), Positives = 104/159 (65%), Gaps = 2/159 (1%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSLQDVVSRYSFMDLWPCSS DLDHLARQEWLA+NINKK +K + + DK +G
Sbjct: 503 LESSLQDVVSRYSFMDLWPCSSKDLDHLARQEWLAKNINKKAEKSAVSNGPATLDKIPAG 562
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQM--PGPAPLAVPSASGTXXXXXXXXXXXXXXXXX 354
++SN+N KV+ PDTS+ +YDPRQ G P S
Sbjct: 563 LASNSNVSGKVIYPDTSQTVIYDPRQKLEAGIPPSTTASGFKAASNPLSNPIGLAPNVFD 622
Query: 355 DILKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
++LK+ PPA +F+ANLP VEGP+P+ D V+S+CLQS++
Sbjct: 623 EVLKATPPALISFLANLPVVEGPAPNVDIVLSICLQSDV 661
>ref|XP_006604052.1| PREDICTED: cleavage stimulation factor subunit 3-like [Glycine max]
Length = 739
Score = 161 bits (408), Expect = 7e-38
Identities = 85/157 (54%), Positives = 106/157 (67%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSLQD+VSRYSFMDLWPCSSNDLDHLARQ+WLA+NINKK +K L DKTS
Sbjct: 484 LESSLQDIVSRYSFMDLWPCSSNDLDHLARQQWLAKNINKKVEKSILPNGTTLLDKTS-- 541
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXXDI 360
++S + P+K+V PDTSKM +YDP+ PG +GT +I
Sbjct: 542 MASISTMPSKIVYPDTSKMVIYDPKHTPG---------AGT-------------NAFDEI 579
Query: 361 LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
LK+ PPA +F+ANLPAVEGP P+ D V+S+CLQS++
Sbjct: 580 LKATPPALVSFLANLPAVEGPMPNVDIVLSICLQSDL 616
>gb|ESW23484.1| hypothetical protein PHAVU_004G051000g [Phaseolus vulgaris]
Length = 738
Score = 161 bits (407), Expect = 9e-38
Identities = 86/157 (54%), Positives = 105/157 (66%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSLQD+VSRYSFMDLWPCSSNDLDHLARQEWL +NINK+ +K L DKTS
Sbjct: 484 LESSLQDIVSRYSFMDLWPCSSNDLDHLARQEWLTKNINKRVEKCILANGTIVIDKTSMS 543
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXXDI 360
S+T+P K+V PDTSKM +YDP+ P + SGT +I
Sbjct: 544 NISSTSP--KIVYPDTSKMVIYDPKHTP-------VTGSGT-------------NAFDEI 581
Query: 361 LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
LK+ PPA AF+ANLPAVEGP+P+ D V+S+CLQS++
Sbjct: 582 LKATPPALVAFLANLPAVEGPTPNVDIVLSICLQSDL 618
>gb|EMJ28185.1| hypothetical protein PRUPE_ppa002118mg [Prunus persica]
Length = 714
Score = 161 bits (407), Expect = 9e-38
Identities = 89/180 (49%), Positives = 112/180 (62%), Gaps = 23/180 (12%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPT----LGIEAGSA-- 162
LESSLQDV SRYSFMDLWPCSS +LDHLARQEWLA+NINKK +K T LG G+
Sbjct: 431 LESSLQDVASRYSFMDLWPCSSKELDHLARQEWLAKNINKKVEKSTMPNGLGFVVGTVWP 490
Query: 163 ----------DKTSSGVSSNTNPPAKVVRPDTSKMTVYDPRQMPG------PAPLAVPSA 294
D+ S+G++SN +KVV PDT++M +YDPRQ PG VP+A
Sbjct: 491 LLSNLCPFCIDEDSTGLTSNLAVSSKVVYPDTNQMVIYDPRQKPGAGNFQTTTAAGVPTA 550
Query: 295 SGTXXXXXXXXXXXXXXXXXD-ILKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
S + D IL++ PPA AF++NLP VEGP+PD D V+S+CLQS++
Sbjct: 551 SKSLSNPVIAAVGGQTMSAFDEILEATPPALVAFLSNLPVVEGPTPDVDVVLSICLQSDV 610
>ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
3-like [Cucumis sativus]
Length = 460
Score = 158 bits (400), Expect = 6e-37
Identities = 83/158 (52%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSLQDVVSRYSFMDLWPC+S+DLD+L RQEWLA+NI+K ++K +L G D S+G
Sbjct: 194 LESSLQDVVSRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGGTGFLDTGSAG 253
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXXD- 357
S++ P KVV PDTS+M +YDP Q+ G P A S D
Sbjct: 254 FMSHSIPSTKVVYPDTSQMVIYDPSQILGILPTATASGLPANPSNPVSVASGAPTSVFDE 313
Query: 358 ILKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
ILK+ P A AF+ANLPAV+GP+PD D V+SVCL+S++
Sbjct: 314 ILKATPAALIAFLANLPAVDGPTPDVDIVLSVCLESDL 351
>ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subunit 3-like [Cucumis
sativus]
Length = 871
Score = 158 bits (400), Expect = 6e-37
Identities = 83/158 (52%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSLQDVVSRYSFMDLWPC+S+DLD+L RQEWLA+NI+K ++K +L G D S+G
Sbjct: 605 LESSLQDVVSRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGGTGFLDTGSAG 664
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXXD- 357
S++ P KVV PDTS+M +YDP Q+ G P A S D
Sbjct: 665 FMSHSIPSTKVVYPDTSQMVIYDPSQILGILPTATASGLPANPSNPVSVASGAPTSVFDE 724
Query: 358 ILKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
ILK+ P A AF+ANLPAV+GP+PD D V+SVCL+S++
Sbjct: 725 ILKATPAALIAFLANLPAVDGPTPDVDIVLSVCLESDL 762
>ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
3-like [Cicer arietinum]
Length = 755
Score = 158 bits (399), Expect = 8e-37
Identities = 86/157 (54%), Positives = 106/157 (67%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSLQDVVSRYSFMDLWPCSSNDLDHL+RQEWLA+NINKK +K + DK S
Sbjct: 511 LESSLQDVVSRYSFMDLWPCSSNDLDHLSRQEWLAKNINKKVEKSLVLNGTTFIDKGS-- 568
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXXDI 360
++S + +KVV PDTSKM VYDP+ PG + +GT +I
Sbjct: 569 IASISTISSKVVYPDTSKMVVYDPKHNPG-------TGAGT-------------NAFDEI 608
Query: 361 LKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
LK+ PPA AF+ANLPAVEGP+P+ D V+S+CLQS++
Sbjct: 609 LKATPPALVAFLANLPAVEGPTPNVDIVLSICLQSDL 645
>gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus notabilis]
Length = 782
Score = 157 bits (398), Expect = 1e-36
Identities = 83/164 (50%), Positives = 105/164 (64%), Gaps = 7/164 (4%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSL DVVSRYSFMDLWPCSSNDLDHLARQ+WLA+N+ K + T G DK ++G
Sbjct: 510 LESSLHDVVSRYSFMDLWPCSSNDLDHLARQQWLAKNMKKNMENFTNPSGLGFIDKGTTG 569
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGPAPL------AVPSASGT-XXXXXXXXXXXX 339
+ SN +KVV PD ++M VYDPRQ PG L +P+AS T
Sbjct: 570 LISNATVSSKVVYPDITQMAVYDPRQKPGTGILPNTAVPGIPAASRTLSNPVVTILSGQA 629
Query: 340 XXXXXDILKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
D+L++ PP AF+ NLPAVEGP+P+ D V+S+CLQS++
Sbjct: 630 TNAFDDVLQATPPTLLAFLTNLPAVEGPTPNVDVVLSICLQSDL 673
>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
gi|223541464|gb|EEF43014.1| plant RNA cleavage
stimulation factor, putative [Ricinus communis]
Length = 767
Score = 157 bits (396), Expect = 2e-36
Identities = 80/163 (49%), Positives = 101/163 (61%), Gaps = 6/163 (3%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LE SLQDV SRYSFMDLWPCSS DLDHLARQEWLA+NI+KK +K T+ G D+ S+G
Sbjct: 501 LEGSLQDVASRYSFMDLWPCSSKDLDHLARQEWLAKNISKKMEKSTISNGLGILDRVSTG 560
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMP------GPAPLAVPSASGTXXXXXXXXXXXXX 342
+ SN+ AKV+ PDTS M +Y+PRQ SAS
Sbjct: 561 LKSNSAVSAKVIYPDTSSMAIYEPRQKHEVGISLSTTATGFGSASNPSSNTIVGLVGSGA 620
Query: 343 XXXXDILKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
+ILK+ PPA +F++ LP VEGP+P+ D V+S+CLQS +
Sbjct: 621 NAFDEILKATPPALISFLSTLPTVEGPTPNVDIVLSICLQSEL 663
>gb|EOY19421.1| Tetratricopeptide repeat-like superfamily protein isoform 6,
partial [Theobroma cacao]
Length = 607
Score = 154 bits (390), Expect = 9e-36
Identities = 77/161 (47%), Positives = 102/161 (63%), Gaps = 4/161 (2%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSLQDVV+RYSF DLWPC+S DLDHL+RQEWLA+NI KK +K + + DK S
Sbjct: 382 LESSLQDVVARYSFKDLWPCTSKDLDHLSRQEWLAKNIGKKVEKSAFSNGSVTIDKNPSA 441
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPGP----APLAVPSASGTXXXXXXXXXXXXXXX 348
+SN+ KV+ PD S+M VYDPRQ P AP + +++
Sbjct: 442 PTSNSTASVKVLYPDISQMVVYDPRQHSAPPNTTAPAILAASNPLSNPTISAVDSGSANA 501
Query: 349 XXDILKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
++LK+ PPA AF+ NLPA+EGP P+ D V+S+CLQS++
Sbjct: 502 FDEVLKATPPALVAFLTNLPALEGPKPNVDIVLSICLQSDL 542
>ref|XP_004968632.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X1
[Setaria italica]
Length = 755
Score = 152 bits (385), Expect = 3e-35
Identities = 82/159 (51%), Positives = 103/159 (64%), Gaps = 3/159 (1%)
Frame = +1
Query: 4 ESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSGV 183
E++L DVVSRYS+MDLWPCSS +L +L RQEWLA+NI KK D+ TL + DK + G+
Sbjct: 500 ENTLHDVVSRYSYMDLWPCSSKELGYLVRQEWLAKNIVKKVDRSTLLNSSNMLDKGTLGI 559
Query: 184 SSNTN---PPAKVVRPDTSKMTVYDPRQMPGPAPLAVPSASGTXXXXXXXXXXXXXXXXX 354
S+NT AKVVRP+TS+M +YDPRQM GP A S
Sbjct: 560 SANTRLLPQSAKVVRPETSQMVIYDPRQMKGPEFSAATSG--------------YTKEVE 605
Query: 355 DILKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
D+LK+L PA A+F+ NLPA+EGPSPD D V+SV LQS +
Sbjct: 606 DMLKTLSPATASFIKNLPAIEGPSPDIDVVLSVLLQSTL 644
>gb|EOY19420.1| Tetratricopeptide repeat-like superfamily protein isoform 5,
partial [Theobroma cacao]
Length = 610
Score = 152 bits (385), Expect = 3e-35
Identities = 77/164 (46%), Positives = 102/164 (62%), Gaps = 7/164 (4%)
Frame = +1
Query: 1 LESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKTSSG 180
LESSLQDVV+RYSF DLWPC+S DLDHL+RQEWLA+NI KK +K + + DK S
Sbjct: 382 LESSLQDVVARYSFKDLWPCTSKDLDHLSRQEWLAKNIGKKVEKSAFSNGSVTIDKNPSA 441
Query: 181 VSSNTNPPAKVVRPDTSKMTVYDPRQMPG-------PAPLAVPSASGTXXXXXXXXXXXX 339
+SN+ KV+ PD S+M VYDPRQ G AP + +++
Sbjct: 442 PTSNSTASVKVLYPDISQMVVYDPRQHSGTAAPPNTTAPAILAASNPLSNPTISAVDSGS 501
Query: 340 XXXXXDILKSLPPAFAAFVANLPAVEGPSPDADFVISVCLQSNI 471
++LK+ PPA AF+ NLPA+EGP P+ D V+S+CLQS++
Sbjct: 502 ANAFDEVLKATPPALVAFLTNLPALEGPKPNVDIVLSICLQSDL 545