BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00020883
         (2247 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   279   e-115
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   286   e-110
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   199   2e-82
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   207   2e-73
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   282   5e-73
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   209   2e-72
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               213   3e-72
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   210   1e-69
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       207   3e-69
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   204   1e-68
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   187   3e-68
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   200   9e-68
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                197   2e-67
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   209   2e-65
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               198   7e-65
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   199   3e-64
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           199   3e-64
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   209   5e-62
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   174   2e-61
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...   184   6e-60

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  279 bits (713), Expect(4) = e-115
 Identities = 143/310 (46%), Positives = 194/310 (62%)
 Frame = -2

Query: 2246 LPALDPRVMRAGPILDINRXXXXXXXXXXXXXXXXLSDIEDSKAPGSDGLNALFFKSAWP 2067
            L  +D   +R G  L                    L+ I + KAPG DG NA FFK +W 
Sbjct: 412  LMGVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGLDGFNAYFFKKSWG 471

Query: 2066 IIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVTDFRPISCCNXXXXXXXXXX 1887
             I +++   + +FF+   +++ INC  VTL PKV++ +RV +FRPI+CC           
Sbjct: 472  SIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKML 531

Query: 1886 XXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGRKSISPRCMVKVDMREAYDS 1707
                  ++  +++ +QS F+PGR I DNI+L  EL++GY RK +SPRC++KVD+R+AYDS
Sbjct: 532  TNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDS 591

Query: 1706 VECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPTPPFPAKKGLGQGDPVSPFL 1527
            VE  FL+ +L    FP +FV  IM CV+TVSYSV +NG PT PF A+KGL QGDP+SPFL
Sbjct: 592  VEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFL 651

Query: 1526 FVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNMLLFSRGDSWFVPMIFQYFQ 1347
            F L M+Y SR L++L+  PDFNFHPKCERLNI  L FAD++L+F R D   +  +   FQ
Sbjct: 652  FALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQ 711

Query: 1346 EFSLVSGLQA 1317
            +FS  SGL A
Sbjct: 712  KFSHASGLAA 721



 Score =  135 bits (340), Expect(4) = e-115
 Identities = 85/232 (36%), Positives = 127/232 (54%), Gaps = 1/232 (0%)
 Frame = -1

Query: 1323 ASNIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMI 1144
            A++ +KS+IYF GV       +   +    GELPFRYLGV L+SK+L+  QC+PL+E + 
Sbjct: 720  AASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMIT 779

Query: 1143 SRITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQC 964
            +R   W +K  SY+GR+QLIKSIL S+Q +++    L K +   + +    F      + 
Sbjct: 780  NRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEE 839

Query: 963  PKKLYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYIKSD 784
             KK                   ++++ WNRAA+ KLLW +  K D+LWVRWI+ YYIK  
Sbjct: 840  TKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQ 899

Query: 783  TIWTTQFAN-AS*VVQKILQSRKHFVAAAYDDNILQQL*KFSTKQLYVKLRE 631
             I T   +N  + +++KI+++R H       D I     KFS K+ Y K+ E
Sbjct: 900  DILTVNISNQTTWILRKIVKARDHLSNIGDWDEICIG-DKFSMKKAYKKISE 950



 Score = 41.6 bits (96), Expect(4) = e-115
 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = -3

Query: 622  KVNWRKLIYNNYGCLKXXXXXXXXXXXGCSLEIDYLN--GVS*SLCCVLCGKVDECHDHL 449
            +V WR+LI NNY   K                +D ++  GV   L   LC    E   HL
Sbjct: 954  RVRWRRLICNNYATPKSKFILWMMLHERLPT-VDRISRWGVQCDLNYRLCRNDGETIQHL 1012

Query: 448  FFICDYSANVWTAILH 401
            FF C YSA VW+ I +
Sbjct: 1013 FFSCSYSAGVWSKICY 1028



 Score = 32.3 bits (72), Expect(4) = e-115
 Identities = 19/71 (26%), Positives = 37/71 (52%)
 Frame = -2

Query: 413  CYITLVGNC*NAQNWQERVNWVVLNAKGNSGRSEIYRMALASVVYTLWQERNKRIFQTKQ 234
            CYI    N  +  + QE ++ V   A+   G+  +  M     VY +W++RNKR F  + 
Sbjct: 1027 CYIMRFPN--SGVSHQEIISSVCGQARKKKGKLIV--MLYTEFVYAIWKQRNKRTFTGEN 1082

Query: 233  RRCSQVIKVVI 201
            +  ++V++ ++
Sbjct: 1083 KDENEVLRKIL 1093


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  286 bits (733), Expect(2) = e-110
 Identities = 140/310 (45%), Positives = 199/310 (64%)
 Frame = -2

Query: 2246 LPALDPRVMRAGPILDINRXXXXXXXXXXXXXXXXLSDIEDSKAPGSDGLNALFFKSAWP 2067
            L A+D  V+R G  L                    L+DI+D+KAPG DG N++FFK +W 
Sbjct: 415  LEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAPGLDGFNSVFFKKSWL 474

Query: 2066 IIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVTDFRPISCCNXXXXXXXXXX 1887
            +I +++ + +LDFF  G ++K INCT+VTL PK+       D+RPI+CC+          
Sbjct: 475  VIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKIL 534

Query: 1886 XXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGRKSISPRCMVKVDMREAYDS 1707
                  V+  ++D +Q+ F+P R I DNI+L  EL++GY R+ +SPRC++KVD+R+AYDS
Sbjct: 535  TKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDS 594

Query: 1706 VECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPTPPFPAKKGLGQGDPVSPFL 1527
            VE  FL+ +L  L FP  F++ IM CV TVSYS+ +NG P+ PF A+KGL QGDP+SPFL
Sbjct: 595  VEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFL 654

Query: 1526 FVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNMLLFSRGDSWFVPMIFQYFQ 1347
            F L+M+Y SR +  + + P+FNFHPKCER+ +  L FAD++L+F+R D+  +  I   F 
Sbjct: 655  FALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFN 714

Query: 1346 EFSLVSGLQA 1317
             FS  SGLQA
Sbjct: 715  SFSKASGLQA 724



 Score =  141 bits (356), Expect(2) = e-110
 Identities = 88/235 (37%), Positives = 133/235 (56%), Gaps = 5/235 (2%)
 Frame = -1

Query: 1320 SNIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMIS 1141
            ++I+KS IYFGGV       +   +    G LPFRYLGV L+SK+L+ +QC+PL++K+ +
Sbjct: 724  ASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITT 783

Query: 1140 RITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGF--CGLV--L 973
            R   W +   SY+GR+QL+K+IL+S+Q ++     L K L   +      F   G V   
Sbjct: 784  RAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTS 843

Query: 972  LQCPKKLYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYI 793
             + P    FL++     GL VT    ++  WN+AAI KLLW ++ K D+LWVRW+N YYI
Sbjct: 844  YKAPVAWDFLQQPKSTGGLNVT----NMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYI 899

Query: 792  KSDTIW-TTQFANAS*VVQKILQSRKHFVAAAYDDNILQQL*KFSTKQLYVKLRE 631
            K   I   T  +N S +++KI +SR+        + +   +  FS K+ Y  L+E
Sbjct: 900  KRQNIENVTVSSNTSWILRKIFESRELLTRTGGWEAVSNHM-NFSIKKTYKLLQE 953


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  199 bits (507), Expect(2) = 2e-82
 Identities = 100/184 (54%), Positives = 130/184 (70%)
 Frame = -2

Query: 1868 VMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGRKSISPRCMVKVDMREAYDSVECQFL 1689
            V+  +I  SQ+ F+PGR I DNIIL HELVK Y RK++SPRCM+K+D+ +AYDSVE  FL
Sbjct: 346  VIHTIISDSQAGFIPGRKIGDNIILAHELVKAYTRKNVSPRCMLKIDLHKAYDSVEWPFL 405

Query: 1688 DQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPTPPFPAKKGLGQGDPVSPFLFVLAMD 1509
            +QV+  L FP  F K +M CV TV+Y++ +NG  T  F A KGL QGDP+SPFLF +AM+
Sbjct: 406  EQVMEGLGFPDLFTKWVMKCVKTVNYTIVVNGQNTQRFDAAKGLRQGDPMSPFLFAIAME 465

Query: 1508 YFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNMLLFSRGDSWFVPMIFQYFQEFSLVS 1329
            Y SR LK L+    F +HPK  +L++  L FAD++LLFSRGD   +  + + F EFS  S
Sbjct: 466  YLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQAS 525

Query: 1328 GLQA 1317
            GLQA
Sbjct: 526  GLQA 529



 Score =  135 bits (341), Expect(2) = 2e-82
 Identities = 72/194 (37%), Positives = 113/194 (58%), Gaps = 12/194 (6%)
 Frame = -1

Query: 1320 SNIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMIS 1141
            +N++KSSIY GGV   V+  I + LG+   ELPF+YLGV LSSK+L+  Q  PL+EK+++
Sbjct: 529  ANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMA 588

Query: 1140 RITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQCP 961
            RI  WT+K  SY+GR QL+K++LF +Q  ++    +   +  L    +EG C        
Sbjct: 589  RINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKL----IEGLC-------- 636

Query: 960  KKLYFLRRNYVIQGLLVT------------LTPLDIQTWNRAAICKLLWNVSQK*DRLWV 817
            +   +    YV +  L+             L  ++++ WNR+A+ KL W+++ K D+LW+
Sbjct: 637  RSYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWI 696

Query: 816  RWINIYYIKSDTIW 775
            +WI+ YYIK    W
Sbjct: 697  KWIHAYYIKGQREW 710


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  207 bits (526), Expect(3) = 2e-73
 Identities = 108/269 (40%), Positives = 157/269 (58%)
 Frame = -2

Query: 2126 DSKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRV 1947
            + K+PG DG  A F+K AW IIG +   A+  FF+ G L K IN T + L PK K    +
Sbjct: 355  NDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEM 414

Query: 1946 TDFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYG 1767
             D+RPISCCN                V+   I  +QSAFV  R++ +N++L  E+VK Y 
Sbjct: 415  KDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYH 474

Query: 1766 RKSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYP 1587
            + S+S RC +K+D+ +A+DSV+ +FL  VL  +NFPP+F   I  C+TT S+SV +NG  
Sbjct: 475  KDSVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGEL 534

Query: 1586 TPPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADN 1407
               F + + L QG  +SP+LFV++MD  S+ L K      F +HPKC  + +  LSFAD+
Sbjct: 535  AGVFSSARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADD 594

Query: 1406 MLLFSRGDSWFVPMIFQYFQEFSLVSGLQ 1320
            +++ S G    +  I +   EF+  SGL+
Sbjct: 595  LMILSDGKVRSIDGIVKVLYEFAKWSGLK 623



 Score = 80.5 bits (197), Expect(3) = 2e-73
 Identities = 39/89 (43%), Positives = 60/89 (67%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            +++KS++Y  GV  +V   I +   F  G+LP RYLG+ L SKRL+ + C PL+E++  +
Sbjct: 625  SMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLPLIEQLRKK 684

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFF 1051
            I  WTS+F S++GR+ LI S L+SI  F+
Sbjct: 685  IEAWTSRFLSFAGRLNLISSTLWSICNFW 713



 Score = 39.3 bits (90), Expect(3) = 2e-73
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -3

Query: 1033 PKKLIRSIASVCRRFLWTGTTTVSKKALLS*EKLCHPR 920
            P+  IR I  +C  FLW+GT   S KA +S E +C P+
Sbjct: 720  PRACIREIDKLCSAFLWSGTELSSNKAKVSWEAICKPK 757


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 402

 Score =  282 bits (721), Expect = 5e-73
 Identities = 146/306 (47%), Positives = 195/306 (63%)
 Frame = -2

Query: 2246 LPALDPRVMRAGPILDINRXXXXXXXXXXXXXXXXLSDIEDSKAPGSDGLNALFFKSAWP 2067
            LP +D  V++ GP+L  ++                L  ++ SKAPG DG N  FFK +W 
Sbjct: 95   LPMVDKNVVKRGPMLSQHQQDLLCSKFTAVEVKNVLFSMDSSKAPGIDGYNVHFFKCSWN 154

Query: 2066 IIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVTDFRPISCCNXXXXXXXXXX 1887
            IIG+ V  A+LDFF  G + K INCT +TL PK  N + V +FRPI+CC+          
Sbjct: 155  IIGDSVIDAILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRPIACCSVIYKIISKIL 214

Query: 1886 XXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGRKSISPRCMVKVDMREAYDS 1707
                  V++ ++  +QSAFV GRVI DNIIL+HELVK Y RK ISPRCMVK+D+++AY+S
Sbjct: 215  TSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYNS 274

Query: 1706 VECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPTPPFPAKKGLGQGDPVSPFL 1527
            VE  F+  ++  L F  KFV  +M C+TT SY+ NING  T PF AKKGL QGDP+SP+L
Sbjct: 275  VEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNINGDLTRPFAAKKGLRQGDPISPYL 334

Query: 1526 FVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNMLLFSRGDSWFVPMIFQYFQ 1347
            FV+ M+Y +  L +LR+   F FHP+C+RLN+I + F D++LLFSRGD   V  +F+ F 
Sbjct: 335  FVICMEYLNICLIQLRKNAAFRFHPRCKRLNLIHVCFVDDLLLFSRGDVDSVSQLFEAFS 394

Query: 1346 EFSLVS 1329
             FS  S
Sbjct: 395  LFSAAS 400


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  209 bits (532), Expect(2) = 2e-72
 Identities = 109/267 (40%), Positives = 156/267 (58%)
 Frame = -2

Query: 2120 KAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVTD 1941
            K+PG DG  + FFK+ W IIG++ T AV  FF+ G L K IN T + L PK      + D
Sbjct: 469  KSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKD 528

Query: 1940 FRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGRK 1761
            +RPISCCN                V+   I  +QSAFV  R++ +N++L  ELVK Y + 
Sbjct: 529  YRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKD 588

Query: 1760 SISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPTP 1581
            +IS RC +K+D+ +A+DSV+  FL  V   L FP +F+  I  C+TT S+SV +NG    
Sbjct: 589  TISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAG 648

Query: 1580 PFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNML 1401
             F + +GL QG  +SP+LFV+ MD  S+ L K      F +HPKC+ + +  LSFAD+++
Sbjct: 649  YFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLM 708

Query: 1400 LFSRGDSWFVPMIFQYFQEFSLVSGLQ 1320
            + S G    +  I + F EF+  SGL+
Sbjct: 709  VLSDGKIRSIERIIKVFDEFAKWSGLR 735



 Score = 92.8 bits (229), Expect(2) = 2e-72
 Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            +++KS++Y  G+    +  +     F  G+LP RYLG+ L +KRLS   C PLLE++  R
Sbjct: 737  SLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKR 796

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFF-SDFHTLLKNL*DLLHQFVEGFCGLVLLQCP 961
            I  WTS+F SY+GR+ LI S+L+SI  F+ + F    K + +L     E  C   L    
Sbjct: 797  IGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIREL-----EKMCSAFLWSGT 851

Query: 960  KKLYFLRRNYVIQGLLVTLTPLD--------IQTWNRAAICKLLWNVSQK*DRLWVRWIN 805
            +    +  N       +   P D        ++  N     KL+W +    + LWV+W++
Sbjct: 852  E----MNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVD 907

Query: 804  IYYIKSDTIWTTQ--FANAS*VVQKILQSRK 718
             + +++ + W  +   +  S + +K+L+ R+
Sbjct: 908  QHLLRNASFWEVKQTVSQGSWIWKKLLKYRE 938


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  213 bits (541), Expect(2) = 3e-72
 Identities = 110/267 (41%), Positives = 156/267 (58%)
 Frame = -2

Query: 2120 KAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVTD 1941
            K+PG DG  + F+K+ W IIG++ T  V  FF  G L K IN   + L PK      + D
Sbjct: 116  KSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRD 175

Query: 1940 FRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGRK 1761
            +RPISCCN                ++   I  +QSAFV  R++ +N++L  ELVK Y + 
Sbjct: 176  YRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKD 235

Query: 1760 SISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPTP 1581
            SIS RC +K+D+ +A+DSV+  FL   L  +NF P F+  I  C+TT S+SV +NG    
Sbjct: 236  SISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVG 295

Query: 1580 PFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNML 1401
             F +K+GL QG  +SP+LFV+ MD  S+ L K   +  F FHPKC+RL +  LSFAD+++
Sbjct: 296  YFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLM 355

Query: 1400 LFSRGDSWFVPMIFQYFQEFSLVSGLQ 1320
            + S G +  +  I + F EF   SGL+
Sbjct: 356  VLSDGKTRSIEGILEVFDEFCKRSGLR 382



 Score = 89.0 bits (219), Expect(2) = 3e-72
 Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 6/205 (2%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            +++KS++Y  GV   ++  I     F  G+LP RYLG+ L +KRL+     PLLE++  R
Sbjct: 384  SLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKR 443

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTL----LKNL*DLLHQFVEGFCGLVLL 970
            I  WT +FFS++GR  LIKS+L+SI  F+     L    ++ +  L   F+     +   
Sbjct: 444  IATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSH 503

Query: 969  QCPKKLYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYIK 790
            +       + +     GL +     +++  N  +  KL+W +    + LW +W+  Y I+
Sbjct: 504  KAKISWDIVCKPKAEGGLGLR----NLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIR 559

Query: 789  SDTIWTTQFANA--S*VVQKILQSR 721
              +IW+ + + +  S + +KIL+ R
Sbjct: 560  KKSIWSLKQSTSMGSWIWRKILKIR 584


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  210 bits (535), Expect(2) = 1e-69
 Identities = 109/271 (40%), Positives = 161/271 (59%)
 Frame = -2

Query: 2132 IEDSKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPS 1953
            +  +K+PG DG  + FFK  W I+G  +  AV +FF  G L    N T+VT+ PK  N  
Sbjct: 458  LPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNAD 517

Query: 1952 RVTDFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKG 1773
            R+T+FRPISCCN                ++   I  SQSAFV GR++T+N++L  ELV+G
Sbjct: 518  RITEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQG 577

Query: 1772 YGRKSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNING 1593
            +G+ +IS R ++KVD+R+A+DSV   F+ + L   N PP+FV  I  C+T+ S+S+N++G
Sbjct: 578  FGQANISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSG 637

Query: 1592 YPTPPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFA 1413
                 F   KGL QGDP+SP LFV+AM+  SR L+         +HPK   + I  L+FA
Sbjct: 638  SLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFA 697

Query: 1412 DNMLLFSRGDSWFVPMIFQYFQEFSLVSGLQ 1320
            D++++F  G +  +  I    + F  +SGL+
Sbjct: 698  DDLMIFYDGKASSLRGIKSVLESFKNLSGLE 728



 Score = 82.8 bits (203), Expect(2) = 1e-69
 Identities = 51/187 (27%), Positives = 89/187 (47%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            N +KS++Y  G+ +      T A GFV G  PFRYLG+ L  ++L  +    L++K+ +R
Sbjct: 730  NTEKSAVYTAGL-EDTDKEDTLAFGFVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAAR 788

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQCPK 958
              +W +K  S++GR+QLI S+++S   F+     L K     + Q    F     +    
Sbjct: 789  FNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRG 848

Query: 957  KLYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYIKSDTI 778
             +    +N  +      L   +  TWN+    +L+W +  + D LWV W +   ++    
Sbjct: 849  DIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNF 908

Query: 777  WTTQFAN 757
            W  + A+
Sbjct: 909  WNAEAAS 915


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  207 bits (527), Expect(2) = 3e-69
 Identities = 110/268 (41%), Positives = 165/268 (61%)
 Frame = -2

Query: 2123 SKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVT 1944
            +K+ G DG  A FF  +W I+G +VT A+ +FFS G L K  N T++ L PK+ NP+  +
Sbjct: 462  NKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTS 521

Query: 1943 DFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGR 1764
            DFRPISC N               +++  +I S+QSAF+PGR + +N++L  +LV GY  
Sbjct: 522  DFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNW 581

Query: 1763 KSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPT 1584
             +ISPR M+KVD+++A+DSV  +F+   L  L  P KF+  I  C++T +++V+ING   
Sbjct: 582  SNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNG 641

Query: 1583 PPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNM 1404
              F + KGL QGDP+SP+LFVLAM+ FS  L         ++HPK   L+I  L FAD++
Sbjct: 642  GFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDV 701

Query: 1403 LLFSRGDSWFVPMIFQYFQEFSLVSGLQ 1320
            ++F  G S+ +  I +   +F+  SGL+
Sbjct: 702  MIFFDGGSFSLHGICETLDDFASWSGLK 729



 Score = 84.3 bits (207), Expect(2) = 3e-69
 Identities = 51/184 (27%), Positives = 86/184 (46%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            N DKS +Y  G+ +    A   A GF  G LP RYLG+ L +++L I + +PLLEK+ +R
Sbjct: 731  NKDKSHLYLAGLNQLESNA-NAAYGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITAR 789

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQCPK 958
               W +K  S++GR+QLI S++F    F+     L K     +      F     ++  K
Sbjct: 790  FRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAK 849

Query: 957  KLYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYIKSDTI 778
             +        +      L    +  WN+    +L+W +    D LW  W +++++   + 
Sbjct: 850  GIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSF 909

Query: 777  WTTQ 766
            W  +
Sbjct: 910  WAVE 913


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  204 bits (519), Expect(2) = 1e-68
 Identities = 102/267 (38%), Positives = 160/267 (59%)
 Frame = -2

Query: 2120 KAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVTD 1941
            K+PG DG  + F+K++W IIG++V  A+  FF+ G L K +N T + L PK K    + D
Sbjct: 190  KSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKD 249

Query: 1940 FRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGRK 1761
            +RPISCCN               +++   I  +QSAFV  R++ +N++L  ELVK Y + 
Sbjct: 250  YRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKD 309

Query: 1760 SISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPTP 1581
            SIS RC +K+D+ +A+DS++  FL  VL  +NFP +F+  I  C++T S+S+ +NG    
Sbjct: 310  SISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAG 369

Query: 1580 PFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNML 1401
             F + +GL QG  +SP+LFV++MD  SR L K     +F +HP+C+ L +  L FAD+++
Sbjct: 370  YFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLM 429

Query: 1400 LFSRGDSWFVPMIFQYFQEFSLVSGLQ 1320
            + + G    V  I +   +F+   GL+
Sbjct: 430  ILTDGKIRSVDGIVKVLNQFAAKLGLK 456



 Score = 85.1 bits (209), Expect(2) = 1e-68
 Identities = 53/201 (26%), Positives = 102/201 (50%), Gaps = 2/201 (0%)
 Frame = -1

Query: 1314 IDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISRI 1135
            ++K+++Y  GV    +  ++    F  G+LP RYLG+ L +KRL+ +   PL++++  RI
Sbjct: 459  MEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRI 518

Query: 1134 TYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQCPKK 955
              WTS++ S++GR+ LI S+L+SI  F+ +   L +   + +++             PKK
Sbjct: 519  GMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKK 578

Query: 954  LYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYIKSDTIW 775
                            L    ++  N+ +  KL+W +    D LWV+W  +  +K ++ W
Sbjct: 579  AKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFW 638

Query: 774  T--TQFANAS*VVQKILQSRK 718
            +  T     S + +++L+ R+
Sbjct: 639  SIGTHSTLGSWIWRRLLKHRE 659


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  187 bits (474), Expect(2) = 3e-68
 Identities = 99/270 (36%), Positives = 156/270 (57%)
 Frame = -2

Query: 2129 EDSKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSR 1950
            E  K+PG DG    FFK+AWP++G D+  A+  FF  G L K IN T + L  K    S 
Sbjct: 613  EAHKSPGPDGYTVEFFKTAWPVLGRDLVIAIQSFFLKGFLPKGINTTILALISKKHEVSG 672

Query: 1949 VTDFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGY 1770
            + D+RPISCCN               +++   I  +QSAF+  R++ +N++L  ELVK Y
Sbjct: 673  MKDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDY 732

Query: 1769 GRKSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGY 1590
             ++SIS R  +K+D+ +A+D V+  FL  VL  ++ P  F+  I  C+ T S+SV +NG 
Sbjct: 733  HKESISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGE 792

Query: 1589 PTPPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFAD 1410
             +  F +++GL QG  +SP+L+V+ M+  S  L K       ++HP+C  +N+  L FAD
Sbjct: 793  LSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFAD 852

Query: 1409 NMLLFSRGDSWFVPMIFQYFQEFSLVSGLQ 1320
            ++++FS G S  +      F++F+ +S L+
Sbjct: 853  DIMVFSDGTSKSIQGTLAIFEKFAAMSWLK 882



 Score =  101 bits (251), Expect(2) = 3e-68
 Identities = 59/186 (31%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            +++KS+I+  G+    + +I +   F  G LP +YLG+ L +KR++ +   PL+EK+ +R
Sbjct: 884  SLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRAR 943

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGF--CGLVLLQC 964
            IT WT++F S++GR+QLIKS+L SI  F+     L K     + +    F   G  L   
Sbjct: 944  ITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTK 1003

Query: 963  PKKLYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYIKSD 784
              K+ +     + +   + L PL  +  N  ++ KL+W +    D LWV+W+N + I+ +
Sbjct: 1004 KAKIAWSEVCKLKEEGGLGLKPL--KEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKE 1061

Query: 783  TIWTTQ 766
            T W+ +
Sbjct: 1062 TFWSVK 1067


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  200 bits (509), Expect(2) = 9e-68
 Identities = 101/269 (37%), Positives = 156/269 (57%)
 Frame = -2

Query: 2126 DSKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRV 1947
            ++K+PG DG  + FFK+ W + G D   A+  FF  G L K +N T + L PK      +
Sbjct: 764  NNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEM 823

Query: 1946 TDFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYG 1767
             D+RPISCCN                ++   I  +QSAFV  R++ +N++L  ELVK Y 
Sbjct: 824  KDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYH 883

Query: 1766 RKSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYP 1587
            ++S++PRC +K+D+ +A+DSV+ QFL   L  LNFP  F   I  C++T ++SV +NG  
Sbjct: 884  KESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGEL 943

Query: 1586 TPPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADN 1407
               F + +GL QG  +SP+LFV+ M+  S  + +     +  +HPKCE++ +  L FAD+
Sbjct: 944  AGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADD 1003

Query: 1406 MLLFSRGDSWFVPMIFQYFQEFSLVSGLQ 1320
            +++F  G  W +  +   F+EF+  SGLQ
Sbjct: 1004 LMVFVDGHQWSIEGVINVFKEFAGRSGLQ 1032



 Score = 86.3 bits (212), Expect(2) = 9e-68
 Identities = 50/182 (27%), Positives = 89/182 (48%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            +++KS+IY  GV  + +V    +  F  G+LP RYLG+ L +K+++     PL+E + ++
Sbjct: 1034 SLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTK 1093

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQCPK 958
            I+ WT++  SY+GR+ L+ S++ SI  F+   + L       + +    F     +  PK
Sbjct: 1094 ISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPK 1153

Query: 957  KLYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYIKSDTI 778
            K      +         L    +   N+ +  KL+W +      LWV WI  + I+  T 
Sbjct: 1154 KAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTF 1213

Query: 777  WT 772
            W+
Sbjct: 1214 WS 1215


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  197 bits (500), Expect(2) = 2e-67
 Identities = 104/267 (38%), Positives = 154/267 (57%)
 Frame = -2

Query: 2123 SKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVT 1944
            +K PG DG  + FFK+ W I G+D   A+  FF  G L K +N T + L PK    + + 
Sbjct: 41   NKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLMR 100

Query: 1943 DFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGR 1764
            D+RPISCCN                ++   I  +QSAFV  R++ +N++L  ELVK Y +
Sbjct: 101  DYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHK 160

Query: 1763 KSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPT 1584
             SISPRC +K+D+ +A+DSV+ QFL   L  LNFP  F   I  C++T ++SV +NG   
Sbjct: 161  DSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELA 220

Query: 1583 PPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNM 1404
              F +K+GL QG  +SP+LFV+ M+  S  +       +  +HPKC++L++  L FAD++
Sbjct: 221  GFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDL 280

Query: 1403 LLFSRGDSWFVPMIFQYFQEFSLVSGL 1323
            ++F  G    V  +   F+EF+  SGL
Sbjct: 281  MVFIDGQQRSVEGVINIFKEFAGKSGL 307



 Score = 88.6 bits (218), Expect(2) = 2e-67
 Identities = 51/182 (28%), Positives = 90/182 (49%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            +++KS++Y  GV +  +  I  A  F  G+LP RYLG+ L +K+++     PLL+K+ S+
Sbjct: 310  SLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSK 369

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQCPK 958
            I+ WT++  SY+GR+ LI S++ S+  F+   + L       + +    F        PK
Sbjct: 370  ISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPK 429

Query: 957  KLYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYIKSDTI 778
            K      +         L    +   N+ +  KL+W +  +   LWV W+  Y I+  + 
Sbjct: 430  KAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSF 489

Query: 777  WT 772
            W+
Sbjct: 490  WS 491


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  209 bits (531), Expect(3) = 2e-65
 Identities = 114/267 (42%), Positives = 164/267 (61%)
 Frame = -2

Query: 2123 SKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVT 1944
            +KA G DG ++ FFK  W ++G +VT+AV +FF  G L K  N T++ L PK+ N S++T
Sbjct: 463  NKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMT 522

Query: 1943 DFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGR 1764
            DFRPISC N               K+++ +I  SQSAF+PGR++++N++L  E+V GY  
Sbjct: 523  DFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNT 582

Query: 1763 KSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPT 1584
            K+IS R M+KVD+R+A+DSV   F+      L  P KFV  I  C++T  +SV +NG  +
Sbjct: 583  KNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSS 642

Query: 1583 PPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNM 1404
              F + KGL QGDP+SP+LFVLAM+ FS  LK         +HPK   L+I  L FAD++
Sbjct: 643  GFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDV 702

Query: 1403 LLFSRGDSWFVPMIFQYFQEFSLVSGL 1323
            ++F  G S  +  I +   +F+  SGL
Sbjct: 703  MVFFDGGSSSLHGISEALDDFASWSGL 729



 Score = 57.8 bits (138), Expect(3) = 2e-65
 Identities = 33/96 (34%), Positives = 53/96 (55%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            N DK+++Y  G  +   +AI+   GF    LP RYLG+ L S++L I++ +     ++ R
Sbjct: 732  NKDKTNLYLAGTDEVEALAISH-YGFPISTLPIRYLGLPLMSRKLKISEYE-----LVKR 785

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLL 1030
               W  K  S++GRVQLI S++  +  F+     LL
Sbjct: 786  FRSWAVKSLSFAGRVQLITSVITGLVNFWMSTFVLL 821



 Score = 33.5 bits (75), Expect(3) = 2e-65
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -3

Query: 1021 IRSIASVCRRFLWTGTTTVSKKALLS*EKLCHPR 920
            ++ I S+C RFLW+G+   SK A ++   +C P+
Sbjct: 825  VKKIESLCSRFLWSGSIDASKGAKIAWSGVCLPK 858


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  198 bits (503), Expect(2) = 7e-65
 Identities = 101/269 (37%), Positives = 155/269 (57%)
 Frame = -2

Query: 2126 DSKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRV 1947
            + K+PG DG  + FFK +W I+G +   A+  FF++G L K +N T + L PK      +
Sbjct: 20   NDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKLESKEM 79

Query: 1946 TDFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYG 1767
             D+RPISCCN                ++   I  +QS+FV  R++ +N++L  +LVK Y 
Sbjct: 80   KDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYH 139

Query: 1766 RKSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYP 1587
            + SIS RC +K+D+ +A DSV+  FL   L  ++FP  F+  I  C+TT S+SV +NG  
Sbjct: 140  KDSISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGEL 199

Query: 1586 TPPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADN 1407
               F + +GL QG  +SP+LFV+ MD  S+ L K+  I    +HP C+R+ +  LSFAD+
Sbjct: 200  AGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADD 259

Query: 1406 MLLFSRGDSWFVPMIFQYFQEFSLVSGLQ 1320
            +++ + G    +  I + F  FS  SGL+
Sbjct: 260  LMILTDGQCRSIEGIIEVFDLFSKWSGLK 288



 Score = 79.0 bits (193), Expect(2) = 7e-65
 Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            +++KS+I+  G+    +  +     F  GELP RYLG+ L +KRLS     PL+E++  R
Sbjct: 290  SMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKR 349

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQCPK 958
            I  W+S+F S++GR  LI SI++S   F+     L +     + +    F         K
Sbjct: 350  IGSWSSRFLSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSK 409

Query: 957  KLYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYIKSDTI 778
            K                L    ++  N     KL+W +    D LWV+W+    +K +  
Sbjct: 410  KAKISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIF 469

Query: 777  W-TTQFAN-AS*VVQKILQSR 721
            W   + AN  S + +KIL+ R
Sbjct: 470  WIVKENANLGSWIWKKILKYR 490


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  199 bits (507), Expect(2) = 3e-64
 Identities = 107/275 (38%), Positives = 163/275 (59%)
 Frame = -2

Query: 2123 SKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVT 1944
            +K  G DG +  FF+  W IIG +V  A+ +FF  G L K  N T++ L PK  N   ++
Sbjct: 322  NKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTIS 381

Query: 1943 DFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGR 1764
            +FRPISC N                ++  +I  SQSAF+PGR + +N++L  E+V GY R
Sbjct: 382  EFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNR 441

Query: 1763 KSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPT 1584
             +ISPR M+KVD+++A+DSV+ +F+   L  L  P +++  I  C+TT S+++++NG   
Sbjct: 442  LNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATG 501

Query: 1583 PPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNM 1404
              F + KGL QGDP+SP+LFVLAM+ FS+ L         ++HPK   L+I  L FAD++
Sbjct: 502  GFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDV 561

Query: 1403 LLFSRGDSWFVPMIFQYFQEFSLVSGLQAI*IKAQ 1299
            ++F  G S  +  I +   +F+  SGL+    K+Q
Sbjct: 562  MIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQ 596



 Score = 75.5 bits (184), Expect(2) = 3e-64
 Identities = 48/181 (26%), Positives = 81/181 (44%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            N DKS ++  G+  + ++  + A GF  G  P RYLG+ L  ++L I    PLLEK+ +R
Sbjct: 591  NKDKSQLFQAGLDLSERIT-SAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSAR 649

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQCPK 958
            +  W SK  S++GR QLI S++F +  F+     L K     +      F     +   K
Sbjct: 650  LRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRK 709

Query: 957  KLYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYIKSDTI 778
                   +  +      L       WN+  + +L+W +  +   LW +W   + +   + 
Sbjct: 710  SSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASF 769

Query: 777  W 775
            W
Sbjct: 770  W 770


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  199 bits (507), Expect(2) = 3e-64
 Identities = 107/275 (38%), Positives = 163/275 (59%)
 Frame = -2

Query: 2123 SKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVT 1944
            +K  G DG +  FF+  W IIG +V  A+ +FF  G L K  N T++ L PK  N   ++
Sbjct: 322  NKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTIS 381

Query: 1943 DFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGR 1764
            +FRPISC N                ++  +I  SQSAF+PGR + +N++L  E+V GY R
Sbjct: 382  EFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNR 441

Query: 1763 KSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPT 1584
             +ISPR M+KVD+++A+DSV+ +F+   L  L  P +++  I  C+TT S+++++NG   
Sbjct: 442  LNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATG 501

Query: 1583 PPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNM 1404
              F + KGL QGDP+SP+LFVLAM+ FS+ L         ++HPK   L+I  L FAD++
Sbjct: 502  GFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDV 561

Query: 1403 LLFSRGDSWFVPMIFQYFQEFSLVSGLQAI*IKAQ 1299
            ++F  G S  +  I +   +F+  SGL+    K+Q
Sbjct: 562  MIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQ 596



 Score = 75.5 bits (184), Expect(2) = 3e-64
 Identities = 48/181 (26%), Positives = 81/181 (44%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            N DKS ++  G+  + ++  + A GF  G  P RYLG+ L  ++L I    PLLEK+ +R
Sbjct: 591  NKDKSQLFQAGLDLSERIT-SAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSAR 649

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQCPK 958
            +  W SK  S++GR QLI S++F +  F+     L K     +      F     +   K
Sbjct: 650  LRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRK 709

Query: 957  KLYFLRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYIKSDTI 778
                   +  +      L       WN+  + +L+W +  +   LW +W   + +   + 
Sbjct: 710  SSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASF 769

Query: 777  W 775
            W
Sbjct: 770  W 770


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  209 bits (532), Expect(2) = 5e-62
 Identities = 114/267 (42%), Positives = 165/267 (61%)
 Frame = -2

Query: 2123 SKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVT 1944
            +KA G DG ++ FFK  W ++G +VT+AV +FF  G L K  N T++ L PK+ N S++T
Sbjct: 463  NKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMT 522

Query: 1943 DFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGR 1764
            DFRPISC N               K+++ +I  SQSAF+PGR++++N++L  E+V GY  
Sbjct: 523  DFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNT 582

Query: 1763 KSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPT 1584
            K+IS R M+KVD+R+A+DSV   F+      L  P KFV  I  C++T  +SV +NG  +
Sbjct: 583  KNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSS 642

Query: 1583 PPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNM 1404
              F + KGL QGDP+SP+LFVLAM+ FS  LK        ++HPK   L+I  L FAD++
Sbjct: 643  GFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDV 702

Query: 1403 LLFSRGDSWFVPMIFQYFQEFSLVSGL 1323
            ++F  G S  +  I +   +F+  SGL
Sbjct: 703  MVFFDGGSSSLHGISEALDDFASWSGL 729



 Score = 58.2 bits (139), Expect(2) = 5e-62
 Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            N DK+++Y  G  +   +AI+   GF    LP RYLG+ L S++L I++ +     ++ R
Sbjct: 732  NKDKTNLYLAGTDEVEALAISH-YGFPISTLPIRYLGLPLMSRKLKISEYE-----LVKR 785

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLL----KNL*DLLHQFVEGFCGLVLL 970
               W  K  S++GRVQLI S++  +  F+     LL    K +  L  +F+  + G +  
Sbjct: 786  FRSWAVKSLSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESLCSRFL--WSGSIDA 843

Query: 969  QCPKKLYF----LRRNYVIQGLLVTLTPLDIQTWNRAAICKLLWNVSQK*DRLW 820
                K+ +    L +N    GL    TP     WN+    + +W +    D LW
Sbjct: 844  SKGAKIAWSGVCLPKNEGGVGLR-RFTP-----WNKTFYLRFIWPLFADNDVLW 891


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|7267919|emb|CAB78261.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 662

 Score =  174 bits (440), Expect(2) = 2e-61
 Identities = 88/232 (37%), Positives = 136/232 (58%)
 Frame = -2

Query: 2015 NLYKAINCTSVTLNPKVKNPSRVTDFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQS 1836
            ++Y  +N T + L PK      + D+RPISCCN               +V+   I  +QS
Sbjct: 22   SIYNGVNSTILALIPKKMEAKEIKDYRPISCCNVLYKVISKIIANRLKRVLPQFIAGNQS 81

Query: 1835 AFVPGRVITDNIILNHELVKGYGRKSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPP 1656
            AF+  R++ +N++L  ELVK Y + S+S RC +K+D+ +A+DSV+  FL  VL  L+FP 
Sbjct: 82   AFIKDRLLIENLLLATELVKDYHKDSVSERCAIKIDISKAFDSVQWSFLRNVLLTLDFPQ 141

Query: 1655 KFVK*IMTCVTTVSYSVNINGYPTPPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRR 1476
            +FV  IM CVTT S+SV +N      F + +GL QG  ++P+LFV+ MD  S+ L +   
Sbjct: 142  EFVHWIMLCVTTASFSVQVNRELAGYFNSLRGLRQGCSLTPYLFVIVMDVLSKKLDRAAG 201

Query: 1475 IPDFNFHPKCERLNIIQLSFADNMLLFSRGDSWFVPMIFQYFQEFSLVSGLQ 1320
            +  F +HPKC+ L +  LSFAD++++ + G    +  I + F  F+  SGL+
Sbjct: 202  LRKFGYHPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVEVFDSFAKQSGLK 253



 Score = 92.0 bits (227), Expect(2) = 2e-61
 Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 9/205 (4%)
 Frame = -1

Query: 1308 KSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISRITY 1129
            K++IYF G+ K+V         F  G LP RYL + L +KR +     PLLE++  RI  
Sbjct: 258  KTTIYFAGISKSVCKEFEDQFHFAVGRLPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGT 317

Query: 1128 WTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQCPKKLY 949
            WT++F SY+GR+ L+ S+L+SI  F+     L +       + ++  C   L   P+   
Sbjct: 318  WTARFLSYAGRLNLVSSVLWSICNFWLSAFRLPRE----CVREIDKLCSAFLWSGPE--- 370

Query: 948  FLRRNYVIQGLLVTLTP--------LDIQTWNRAAICKLLWNVSQK*DRLWVRWINIYYI 793
             L  N           P          I+  N     KL+W +  + D LWV+WI  Y +
Sbjct: 371  -LSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLL 429

Query: 792  KSDTIWTTQFAN-AS*VVQKILQSR 721
            K +T W+ + A+  S + +K+L+ R
Sbjct: 430  KRNTFWSFRSASQGSWMWKKLLKYR 454


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1| AT4g02490
            [Arabidopsis thaliana]
          Length = 657

 Score =  184 bits (466), Expect(2) = 6e-60
 Identities = 101/267 (37%), Positives = 143/267 (53%)
 Frame = -2

Query: 2123 SKAPGSDGLNALFFKSAWPIIGEDVTQAVLDFFSVGNLYKAINCTSVTLNPKVKNPSRVT 1944
            +KAPG DG    FF  AWPI+ E    A+ +FF  G+L K  N T++TL PKV    ++ 
Sbjct: 9    NKAPGPDGFPVEFFLEAWPIVKESFIAAIKEFFLTGHLLKGFNATAITLIPKVPGADQLN 68

Query: 1943 DFRPISCCNXXXXXXXXXXXXXXXKVMDYLIDSSQSAFVPGRVITDNIILNHELVKGYGR 1764
             FRP++CC                  +D  + S+Q  F+ GR++ +N++L  ELV  +  
Sbjct: 69   LFRPVACCTTIYKVITRLISKRLNLFIDQAVQSNQVGFIKGRLLCENVLLASELVDNFQA 128

Query: 1763 KSISPRCMVKVDMREAYDSVECQFLDQVLCCLNFPPKFVK*IMTCVTTVSYSVNINGYPT 1584
            +  + R  ++VD+ +AYD+V  +FL  +L  LN PP F+  I  C++T SYS+  NG   
Sbjct: 129  EGDTSRGCLQVDLTKAYDNVNWEFLINILKALNLPPIFINWIWVCISTPSYSIAYNGELI 188

Query: 1583 PPFPAKKGLGQGDPVSPFLFVLAMDYFSRNLKKLRRIPDFNFHPKCERLNIIQLSFADNM 1404
              F  KKG+ QGDP+S  LFVL MD  +R+L        F  HPKC    I  LSFAD++
Sbjct: 189  GFFVGKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDI 248

Query: 1403 LLFSRGDSWFVPMIFQYFQEFSLVSGL 1323
            L+F  G    +  I      F   SGL
Sbjct: 249  LVFCDGSLSSLVAILDILDVFKKGSGL 275



 Score = 76.6 bits (187), Expect(2) = 6e-60
 Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 3/173 (1%)
 Frame = -1

Query: 1317 NIDKSSIYFGGVPKAVQVAITKALGFVKGELPFRYLGVSLSSKRLSINQCQPLLEKMISR 1138
            N+ K+++   G        +  +LG  +G LP RYLGV L S+++  +  QPL++++ SR
Sbjct: 278  NLQKTALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSR 337

Query: 1137 ITYWTSKFFSYSGRVQLIKSILFSIQVFFSDFHTLLKNL*DLLHQFVEGFCGLVLLQCPK 958
             T WT++  S++GR+QL+KS+++S   F++    L       L Q    F   +    P 
Sbjct: 338  FTSWTARHLSFAGRLQLLKSVIYSTINFWASIFILPNQCLHKLEQMCNAF---LWSGAPN 394

Query: 957  KLYFLRRNYVIQGLLVTLTPLDIQ---TWNRAAICKLLWNVSQK*DRLWVRWI 808
                 + ++ I         L ++   +WN+    KL+W +      LWV W+
Sbjct: 395  SAREAKISWDIVCSSKESGGLGLKRLSSWNKVLALKLIWLLFTASGSLWVSWV 447