BLASTX nr result
ID: Atropa21_contig00020667
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00020667
(961 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353100.1| PREDICTED: uncharacterized protein LOC102603... 396 e-108
ref|XP_004239612.1| PREDICTED: 50S ribosomal protein L9-like iso... 376 e-102
ref|XP_004239611.1| PREDICTED: 50S ribosomal protein L9-like iso... 374 e-101
gb|EOY19119.1| Ribosomal protein L9/RNase H1 isoform 3 [Theobrom... 246 7e-63
ref|XP_006401748.1| hypothetical protein EUTSA_v10014627mg [Eutr... 244 5e-62
ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis v... 243 1e-61
gb|EOY19117.1| Ribosomal protein L9/RNase H1 isoform 1 [Theobrom... 242 1e-61
ref|XP_002332160.1| predicted protein [Populus trichocarpa] 242 1e-61
ref|XP_002864216.1| ribosomal protein L9 family protein [Arabido... 242 2e-61
ref|XP_006377119.1| hypothetical protein POPTR_0012s15210g [Popu... 241 2e-61
ref|XP_006377023.1| hypothetical protein POPTR_0012s12200g [Popu... 241 2e-61
ref|NP_200119.1| ribosomal protein L9/RNase H1 [Arabidopsis thal... 241 2e-61
ref|XP_006281066.1| hypothetical protein CARUB_v10027089mg [Caps... 241 3e-61
ref|XP_006387137.1| hypothetical protein POPTR_1727s00200g [Popu... 241 4e-61
ref|XP_004146229.1| PREDICTED: 50S ribosomal protein L9-like [Cu... 240 5e-61
ref|XP_002336372.1| predicted protein [Populus trichocarpa] 240 5e-61
ref|XP_002317788.1| hypothetical protein POPTR_0012s02440g [Popu... 239 1e-60
ref|XP_006493612.1| PREDICTED: 50S ribosomal protein L9, chlorop... 232 1e-58
ref|XP_006493611.1| PREDICTED: 50S ribosomal protein L9, chlorop... 232 1e-58
ref|XP_006442542.1| hypothetical protein CICLE_v10022175mg [Citr... 232 2e-58
>ref|XP_006353100.1| PREDICTED: uncharacterized protein LOC102603529 [Solanum tuberosum]
Length = 224
Score = 396 bits (1017), Expect = e-108
Identities = 199/224 (88%), Positives = 206/224 (91%), Gaps = 2/224 (0%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLKNVKTSSAIFHK--GGEAHFHHPLFYAAQGVRYRKLQVILTTSID 187
M+CLQY +NTLRQQLKNVKTS+AIF K GGE H HHPLFYA QGVRYRKLQVILTT ID
Sbjct: 1 MACLQYGRNTLRQQLKNVKTSAAIFQKCQGGEVHLHHPLFYAVQGVRYRKLQVILTTGID 60
Query: 188 KLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATKE 367
LGKAGETV+VAPGYFRNHLMPKLLAVPNIDKY+HLMEDQRKIYQREEVEEVKIVPATKE
Sbjct: 61 NLGKAGETVRVAPGYFRNHLMPKLLAVPNIDKYRHLMEDQRKIYQREEVEEVKIVPATKE 120
Query: 368 SKMKEYQMAANRLDRTKLVLRKLAKKPLMKDDNGGTFIQEPVGKDEIVVEVARQISVRIE 547
KMKEYQMAANRLDRT LVLRKLAKKPL KDDN TFIQEP+GKDEIV EVARQISV IE
Sbjct: 121 DKMKEYQMAANRLDRTMLVLRKLAKKPLAKDDNCRTFIQEPIGKDEIVAEVARQISVHIE 180
Query: 548 PEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
PEHLVLDTPLHVMGEFEVPLR+PRSIPLPEGK QWVL VKIRGK
Sbjct: 181 PEHLVLDTPLHVMGEFEVPLRIPRSIPLPEGKVQWVLQVKIRGK 224
>ref|XP_004239612.1| PREDICTED: 50S ribosomal protein L9-like isoform 2 [Solanum
lycopersicum]
Length = 223
Score = 376 bits (965), Expect = e-102
Identities = 189/221 (85%), Positives = 200/221 (90%), Gaps = 2/221 (0%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLKNVKTSSAIFH--KGGEAHFHHPLFYAAQGVRYRKLQVILTTSID 187
M+CLQY +NTLRQQLKNVKT +AIF + GE H HHPLFYAAQGVRYRKLQVILTT ID
Sbjct: 1 MACLQYGRNTLRQQLKNVKTPAAIFQNCESGEVHLHHPLFYAAQGVRYRKLQVILTTGID 60
Query: 188 KLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATKE 367
KLGKAGETV+VAPGYFRNHLMPKLLAVPNIDKY+HLMEDQRKIYQREEVEEVKIVPATKE
Sbjct: 61 KLGKAGETVRVAPGYFRNHLMPKLLAVPNIDKYRHLMEDQRKIYQREEVEEVKIVPATKE 120
Query: 368 SKMKEYQMAANRLDRTKLVLRKLAKKPLMKDDNGGTFIQEPVGKDEIVVEVARQISVRIE 547
KMKEYQMAANRLDRT LVLRKLAKKPL KDDNG TFIQE +GKDEIV EVARQISV IE
Sbjct: 121 DKMKEYQMAANRLDRTMLVLRKLAKKPLAKDDNGRTFIQESIGKDEIVAEVARQISVHIE 180
Query: 548 PEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKI 670
PEHLVLDTPLHVMGEFEVPLRMPRSIPLPE K ++ L ++
Sbjct: 181 PEHLVLDTPLHVMGEFEVPLRMPRSIPLPEEKKHFIQLFRL 221
>ref|XP_004239611.1| PREDICTED: 50S ribosomal protein L9-like isoform 1 [Solanum
lycopersicum]
Length = 224
Score = 374 bits (960), Expect = e-101
Identities = 188/211 (89%), Positives = 195/211 (92%), Gaps = 2/211 (0%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLKNVKTSSAIFH--KGGEAHFHHPLFYAAQGVRYRKLQVILTTSID 187
M+CLQY +NTLRQQLKNVKT +AIF + GE H HHPLFYAAQGVRYRKLQVILTT ID
Sbjct: 1 MACLQYGRNTLRQQLKNVKTPAAIFQNCESGEVHLHHPLFYAAQGVRYRKLQVILTTGID 60
Query: 188 KLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATKE 367
KLGKAGETV+VAPGYFRNHLMPKLLAVPNIDKY+HLMEDQRKIYQREEVEEVKIVPATKE
Sbjct: 61 KLGKAGETVRVAPGYFRNHLMPKLLAVPNIDKYRHLMEDQRKIYQREEVEEVKIVPATKE 120
Query: 368 SKMKEYQMAANRLDRTKLVLRKLAKKPLMKDDNGGTFIQEPVGKDEIVVEVARQISVRIE 547
KMKEYQMAANRLDRT LVLRKLAKKPL KDDNG TFIQE +GKDEIV EVARQISV IE
Sbjct: 121 DKMKEYQMAANRLDRTMLVLRKLAKKPLAKDDNGRTFIQESIGKDEIVAEVARQISVHIE 180
Query: 548 PEHLVLDTPLHVMGEFEVPLRMPRSIPLPEG 640
PEHLVLDTPLHVMGEFEVPLRMPRSIPLPEG
Sbjct: 181 PEHLVLDTPLHVMGEFEVPLRMPRSIPLPEG 211
>gb|EOY19119.1| Ribosomal protein L9/RNase H1 isoform 3 [Theobroma cacao]
gi|508727224|gb|EOY19121.1| Ribosomal protein L9/RNase
H1 isoform 3 [Theobroma cacao]
Length = 217
Score = 246 bits (629), Expect = 7e-63
Identities = 134/227 (59%), Positives = 162/227 (71%), Gaps = 5/227 (2%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLKNVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSIDKL 193
M+ LQ+ +N LRQ +++ + + PL +A QGVRYRKL+VILTTSI+KL
Sbjct: 1 MAYLQHGRNALRQIIRDTNVQN-------QDRLMQPLLFACQGVRYRKLEVILTTSIEKL 53
Query: 194 GKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATKESK 373
GKAGETV+VAPGYFRNHLMPKLLAVPNIDK+ HL+ +QRKIYQ EE EEV++V T E K
Sbjct: 54 GKAGETVRVAPGYFRNHLMPKLLAVPNIDKFVHLIREQRKIYQPEE-EEVQVVAKTVEDK 112
Query: 374 MKEYQMAANRLDRTKLVLRKLA-----KKPLMKDDNGGTFIQEPVGKDEIVVEVARQISV 538
KEY+ AANRL +LVLR+ + KDD ++ PV KDE+V EVARQ+ V
Sbjct: 113 TKEYEKAANRLVNARLVLRRFIDVEKFRARATKDD--PVELRSPVTKDELVAEVARQLCV 170
Query: 539 RIEPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
IEPE+L L TPL GEFEVPLR+P+SIPLPEGK W L VKIRGK
Sbjct: 171 HIEPENLYLPTPLSTFGEFEVPLRLPKSIPLPEGKVHWTLQVKIRGK 217
>ref|XP_006401748.1| hypothetical protein EUTSA_v10014627mg [Eutrema salsugineum]
gi|557102838|gb|ESQ43201.1| hypothetical protein
EUTSA_v10014627mg [Eutrema salsugineum]
Length = 220
Score = 244 bits (622), Expect = 5e-62
Identities = 125/213 (58%), Positives = 155/213 (72%), Gaps = 3/213 (1%)
Frame = +2
Query: 47 RQQLKNVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSIDKLGKAGETVKVAP 226
R +++V + FHK A HHPL +A QGVRYRKL+VILTT I+KLGKAGETVKVAP
Sbjct: 8 RNVIRHVVSRGTAFHKSENA-IHHPLLFACQGVRYRKLEVILTTGIEKLGKAGETVKVAP 66
Query: 227 GYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATKESKMKEYQMAANRL 406
GYFRNHLMPKLLAVPNIDKY HL+ +QRK+ EE EEVK+V T E + KE++ AA RL
Sbjct: 67 GYFRNHLMPKLLAVPNIDKYAHLIREQRKMRNYEEKEEVKVVHKTSEVQTKEFEKAAKRL 126
Query: 407 DRTKLVLRKLAKKPLMKDDNG---GTFIQEPVGKDEIVVEVARQISVRIEPEHLVLDTPL 577
LVLRKL K K + +Q PV K+EIV EVARQ+ V+I+P+++VL TPL
Sbjct: 127 ANANLVLRKLIDKEKFKSRSSKEDKPDVQTPVTKEEIVSEVARQLCVKIDPDNVVLPTPL 186
Query: 578 HVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRG 676
GE+EVPL+ P++IPLP+G QW+L VK+RG
Sbjct: 187 ATFGEYEVPLKFPKTIPLPQGTVQWILKVKVRG 219
>ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis vinifera]
gi|302143920|emb|CBI23025.3| unnamed protein product
[Vitis vinifera]
Length = 217
Score = 243 bits (619), Expect = 1e-61
Identities = 129/226 (57%), Positives = 166/226 (73%), Gaps = 4/226 (1%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLKNVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSIDKL 193
M+ +QY +N LR +K+V + + +PL Y QGVRYRKL+VILTT+IDKL
Sbjct: 1 MAYMQYGRNILRHIVKDVGSQCS-------DRVVNPLLYVCQGVRYRKLEVILTTNIDKL 53
Query: 194 GKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATKESK 373
GKAGETVKVAPGYFRNHLMPKLLAVPNI+K+ +L+ +QRK+YQ EEVEEVK V T+E K
Sbjct: 54 GKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAYLISEQRKLYQPEEVEEVKEVVETEEDK 113
Query: 374 MKEYQMAANRLDRTKLVLRKLAK----KPLMKDDNGGTFIQEPVGKDEIVVEVARQISVR 541
MKEY AA RL+ T++ R+ K +P+ K + ++ P+ KD++V EVARQ+SV+
Sbjct: 114 MKEYHTAAKRLETTRVAFRRFIKFEKGQPVRKGE--PLELRSPITKDDLVAEVARQLSVQ 171
Query: 542 IEPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
+EPE L L +PL +GEFEVPLR+P+SIPLPEGK +W L VKIR K
Sbjct: 172 VEPESLHLPSPLTHVGEFEVPLRLPKSIPLPEGKVRWTLKVKIRCK 217
>gb|EOY19117.1| Ribosomal protein L9/RNase H1 isoform 1 [Theobroma cacao]
Length = 252
Score = 242 bits (618), Expect = 1e-61
Identities = 132/225 (58%), Positives = 160/225 (71%), Gaps = 5/225 (2%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLKNVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSIDKL 193
M+ LQ+ +N LRQ +++ + + PL +A QGVRYRKL+VILTTSI+KL
Sbjct: 1 MAYLQHGRNALRQIIRDTNVQN-------QDRLMQPLLFACQGVRYRKLEVILTTSIEKL 53
Query: 194 GKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATKESK 373
GKAGETV+VAPGYFRNHLMPKLLAVPNIDK+ HL+ +QRKIYQ EE EEV++V T E K
Sbjct: 54 GKAGETVRVAPGYFRNHLMPKLLAVPNIDKFVHLIREQRKIYQPEE-EEVQVVAKTVEDK 112
Query: 374 MKEYQMAANRLDRTKLVLRKLA-----KKPLMKDDNGGTFIQEPVGKDEIVVEVARQISV 538
KEY+ AANRL +LVLR+ + KDD ++ PV KDE+V EVARQ+ V
Sbjct: 113 TKEYEKAANRLVNARLVLRRFIDVEKFRARATKDD--PVELRSPVTKDELVAEVARQLCV 170
Query: 539 RIEPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIR 673
IEPE+L L TPL GEFEVPLR+P+SIPLPEGK W L VKIR
Sbjct: 171 HIEPENLYLPTPLSTFGEFEVPLRLPKSIPLPEGKVHWTLQVKIR 215
>ref|XP_002332160.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 242 bits (618), Expect = 1e-61
Identities = 129/228 (56%), Positives = 163/228 (71%), Gaps = 6/228 (2%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLK---NVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSI 184
M+C+Q+ +N LR+ + N+K+S H PL YA QGVRY+KL+VILTTSI
Sbjct: 1 MACIQHSRNALRRIVAKETNLKSSDGAIH---------PLLYACQGVRYKKLEVILTTSI 51
Query: 185 DKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATK 364
+KLGKAG+TVKVAPG+FRNHLMPKLLAVPNI+K+ HL+ +QRKIYQ EE EEVK+V T
Sbjct: 52 EKLGKAGQTVKVAPGHFRNHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETM 111
Query: 365 ESKMKEYQMAANRLDRTKLVLR---KLAKKPLMKDDNGGTFIQEPVGKDEIVVEVARQIS 535
E KMKEY+ AA RL + +L R AK + + I PV KD+I+ EV RQ +
Sbjct: 112 EDKMKEYETAAKRLVKAQLAFRVGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFN 171
Query: 536 VRIEPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
V+IEP+++ L +PL +GEFEVPLR P+SIPLPEGK +W L VKIRGK
Sbjct: 172 VQIEPDNVHLPSPLTALGEFEVPLRFPKSIPLPEGKVKWTLKVKIRGK 219
>ref|XP_002864216.1| ribosomal protein L9 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297310051|gb|EFH40475.1| ribosomal protein L9
family protein [Arabidopsis lyrata subsp. lyrata]
Length = 221
Score = 242 bits (617), Expect = 2e-61
Identities = 123/214 (57%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Frame = +2
Query: 47 RQQLKNVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSIDKLGKAGETVKVAP 226
R +++V T +HK A HHPL +A QGVRYRKL+VILTT I+KLGKAGETVKVAP
Sbjct: 8 RNVIRHVVTRGTAYHKSENA-IHHPLLFACQGVRYRKLEVILTTGIEKLGKAGETVKVAP 66
Query: 227 GYFRNHLMPKLLAVPNIDKYKHLMEDQRKIY-QREEVEEVKIVPATKESKMKEYQMAANR 403
GYFRNHLMPKLLAVPNIDKY +L+ +QRK+Y EE EEVK+V T E + KEY+ AA R
Sbjct: 67 GYFRNHLMPKLLAVPNIDKYAYLIREQRKMYNHEEEKEEVKVVHKTSEVQTKEYEKAAKR 126
Query: 404 LDRTKLVLRKLAKKPLMKD---DNGGTFIQEPVGKDEIVVEVARQISVRIEPEHLVLDTP 574
L LVLRKL K K+ + +Q P+ K+EIV EVARQ+ V+I+P+++VL P
Sbjct: 127 LANANLVLRKLVDKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKIDPDNVVLPAP 186
Query: 575 LHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRG 676
L GE+EVPL+ P++IPLP+G QW+L +K+RG
Sbjct: 187 LETFGEYEVPLKFPKTIPLPQGTVQWILKIKVRG 220
>ref|XP_006377119.1| hypothetical protein POPTR_0012s15210g [Populus trichocarpa]
gi|550327167|gb|ERP54916.1| hypothetical protein
POPTR_0012s15210g [Populus trichocarpa]
Length = 333
Score = 241 bits (616), Expect = 2e-61
Identities = 129/228 (56%), Positives = 163/228 (71%), Gaps = 6/228 (2%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLK---NVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSI 184
M+C+Q+ +N LRQ + N+K+S + PL YA QGVRY+KL+VILTTSI
Sbjct: 115 MACIQHSRNALRQIIAKETNLKSSDGAIN---------PLLYACQGVRYKKLEVILTTSI 165
Query: 185 DKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATK 364
+KLGKAG+TVKVAPG+FRNHLMPKLLAVPNI+K+ HL+ +QRKIYQ EE EEVK+V T
Sbjct: 166 EKLGKAGQTVKVAPGHFRNHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETM 225
Query: 365 ESKMKEYQMAANRLDRTKLVLR---KLAKKPLMKDDNGGTFIQEPVGKDEIVVEVARQIS 535
E KMKEY+ AA RL + +L R AK + + I PV KD+I+ EV RQ +
Sbjct: 226 EDKMKEYETAAKRLVKAQLAFRAGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFN 285
Query: 536 VRIEPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
V+IEP+++ L +PL +GEFEVPLR P+SIPLPEGK +W L VKIRGK
Sbjct: 286 VQIEPDNVHLPSPLTALGEFEVPLRFPKSIPLPEGKVKWTLKVKIRGK 333
>ref|XP_006377023.1| hypothetical protein POPTR_0012s12200g [Populus trichocarpa]
gi|550326961|gb|ERP54820.1| hypothetical protein
POPTR_0012s12200g [Populus trichocarpa]
Length = 219
Score = 241 bits (616), Expect = 2e-61
Identities = 128/228 (56%), Positives = 163/228 (71%), Gaps = 6/228 (2%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLK---NVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSI 184
M+C+Q+ +N LR+ + N+K+S H PL YA QGVRY+KL+VILTTSI
Sbjct: 1 MACIQHSRNALRRIVAKETNLKSSDGAIH---------PLLYACQGVRYKKLEVILTTSI 51
Query: 185 DKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATK 364
+KLGKAG+TVKVAPG+FRNHLMPKLLAVPNI+K+ HL+ +QRKIYQ EE EEVK+V T
Sbjct: 52 EKLGKAGQTVKVAPGHFRNHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETM 111
Query: 365 ESKMKEYQMAANRLDRTKLVLR---KLAKKPLMKDDNGGTFIQEPVGKDEIVVEVARQIS 535
E KMKEY+ AA RL + +L R AK + + I PV KD+I+ EV RQ +
Sbjct: 112 EDKMKEYETAAKRLVKAQLAFRVGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFN 171
Query: 536 VRIEPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
V+IEP+++ L +PL +GEFEVPLR P+SIP+PEGK +W L VKIRGK
Sbjct: 172 VQIEPDNVHLPSPLTALGEFEVPLRFPKSIPMPEGKVKWTLKVKIRGK 219
>ref|NP_200119.1| ribosomal protein L9/RNase H1 [Arabidopsis thaliana]
gi|8809596|dbj|BAA97147.1| unnamed protein product
[Arabidopsis thaliana] gi|27754507|gb|AAO22701.1|
unknown protein [Arabidopsis thaliana]
gi|28393965|gb|AAO42390.1| unknown protein [Arabidopsis
thaliana] gi|332008917|gb|AED96300.1| ribosomal protein
L9/RNase H1 [Arabidopsis thaliana]
Length = 221
Score = 241 bits (616), Expect = 2e-61
Identities = 124/214 (57%), Positives = 157/214 (73%), Gaps = 4/214 (1%)
Frame = +2
Query: 47 RQQLKNVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSIDKLGKAGETVKVAP 226
R +++V + +HK A HHPL +A QGVRYRKL+VILTT I+KLGKAGETVKVAP
Sbjct: 8 RNVIRHVVSRGTAYHKYENA-IHHPLLFACQGVRYRKLEVILTTGIEKLGKAGETVKVAP 66
Query: 227 GYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEV-EEVKIVPATKESKMKEYQMAANR 403
GYFRNHLMPKLLAVPNIDKY +L+ +QRK+Y EEV EEVK+V T E + KEY+ AA R
Sbjct: 67 GYFRNHLMPKLLAVPNIDKYAYLIREQRKMYNHEEVKEEVKVVHKTSEVQTKEYEKAAKR 126
Query: 404 LDRTKLVLRKLAKKPLMKD---DNGGTFIQEPVGKDEIVVEVARQISVRIEPEHLVLDTP 574
L LVLRKL K K+ + +Q P+ K+EIV EVARQ+ V+I+P+++VL P
Sbjct: 127 LANANLVLRKLVDKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKIDPDNVVLAAP 186
Query: 575 LHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRG 676
L GE+EVPL+ P++IPLP+G QW+L VK+RG
Sbjct: 187 LETFGEYEVPLKFPKTIPLPQGTVQWILKVKVRG 220
>ref|XP_006281066.1| hypothetical protein CARUB_v10027089mg [Capsella rubella]
gi|482549770|gb|EOA13964.1| hypothetical protein
CARUB_v10027089mg [Capsella rubella]
Length = 221
Score = 241 bits (615), Expect = 3e-61
Identities = 124/214 (57%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Frame = +2
Query: 47 RQQLKNVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSIDKLGKAGETVKVAP 226
R +++V + +HK A HHPL +A QGVRYRKL+VILTT I+KLGKAGETVKVAP
Sbjct: 8 RNVIRHVVSRGTAYHKYDNA-IHHPLLFACQGVRYRKLEVILTTGIEKLGKAGETVKVAP 66
Query: 227 GYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREE-VEEVKIVPATKESKMKEYQMAANR 403
GYFRNHLMPKLLAVPNIDKY +L+ +QRK+Y EE EEVK+V T E + KEY+ AA R
Sbjct: 67 GYFRNHLMPKLLAVPNIDKYAYLIREQRKLYNHEEDKEEVKVVHKTSEVQTKEYEKAAKR 126
Query: 404 LDRTKLVLRKLAKKPLMKD---DNGGTFIQEPVGKDEIVVEVARQISVRIEPEHLVLDTP 574
L LVLRKL K K+ + +Q PV K+EIV EVARQ+ V+I+P+++VL P
Sbjct: 127 LANANLVLRKLIDKEKFKNRSSKDDKPDVQTPVTKEEIVAEVARQLCVKIDPDNVVLPAP 186
Query: 575 LHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRG 676
L GE+EVPL+ P++IPLP+G QW+L VK+RG
Sbjct: 187 LETFGEYEVPLKFPKTIPLPQGTVQWILKVKVRG 220
>ref|XP_006387137.1| hypothetical protein POPTR_1727s00200g [Populus trichocarpa]
gi|566253043|ref|XP_006387138.1| hypothetical protein
POPTR_1727s00200g [Populus trichocarpa]
gi|550305208|gb|ERP46051.1| hypothetical protein
POPTR_1727s00200g [Populus trichocarpa]
gi|550305209|gb|ERP46052.1| hypothetical protein
POPTR_1727s00200g [Populus trichocarpa]
Length = 219
Score = 241 bits (614), Expect = 4e-61
Identities = 128/228 (56%), Positives = 163/228 (71%), Gaps = 6/228 (2%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLK---NVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSI 184
M+C+Q+ +N LR+ + ++K+S H PL YA QGVRY+KL+VILTTSI
Sbjct: 1 MACIQHSRNALRRIIAKETSLKSSDGAIH---------PLLYACQGVRYKKLEVILTTSI 51
Query: 185 DKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATK 364
+KLGKAG+TVKVAPG+FRNHLMPKLLAVPNI+K+ HL+ +QRKIYQ EE EEVK+V T
Sbjct: 52 EKLGKAGQTVKVAPGHFRNHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETM 111
Query: 365 ESKMKEYQMAANRLDRTKLVLR---KLAKKPLMKDDNGGTFIQEPVGKDEIVVEVARQIS 535
E KMKEY+ AA RL + +L R AK + + I PV KD+I+ EV RQ +
Sbjct: 112 EDKMKEYETAAKRLVKARLAFRVGINTAKFRARESKDDPIEILSPVTKDDILREVTRQFN 171
Query: 536 VRIEPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
V+IEP+++ L +PL +GEFEVPLR P+SIPLPEGK +W L VKIRGK
Sbjct: 172 VQIEPDNVHLPSPLTALGEFEVPLRFPKSIPLPEGKVKWTLQVKIRGK 219
>ref|XP_004146229.1| PREDICTED: 50S ribosomal protein L9-like [Cucumis sativus]
gi|449517603|ref|XP_004165835.1| PREDICTED: 50S
ribosomal protein L9-like [Cucumis sativus]
Length = 218
Score = 240 bits (613), Expect = 5e-61
Identities = 128/225 (56%), Positives = 160/225 (71%), Gaps = 3/225 (1%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLKNVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSIDKL 193
M+C+QY +N LR +K+ K H + PL ++ QGVR+RKL+VILTTSI+KL
Sbjct: 1 MACIQYCRNALRNIIKDTK-----LHPSDQ--MMQPLLFSGQGVRHRKLEVILTTSIEKL 53
Query: 194 GKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATKESK 373
GKAGETVKVAPGYFRNHLMPK+LAVPNI+KY +L+++QR+IYQ E E VK+V TKE K
Sbjct: 54 GKAGETVKVAPGYFRNHLMPKILAVPNIEKYAYLIKEQRRIYQPVEEEVVKVVTLTKEDK 113
Query: 374 MKEYQMAANRLDRTKLVLRKLAKKPLMKD---DNGGTFIQEPVGKDEIVVEVARQISVRI 544
MKEY+ AA RLD +LVLR+L K + + +Q V D+IV EVARQ SV+I
Sbjct: 114 MKEYEKAARRLDSKQLVLRRLIDKEKFRTRAAKDEPLALQSSVTVDDIVAEVARQFSVQI 173
Query: 545 EPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
PE+L L +PL GE+EVPLR P+SIPLPEGK W L VK+R K
Sbjct: 174 APENLNLASPLSACGEYEVPLRFPKSIPLPEGKVYWTLKVKVRSK 218
>ref|XP_002336372.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 240 bits (613), Expect = 5e-61
Identities = 127/228 (55%), Positives = 163/228 (71%), Gaps = 6/228 (2%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLK---NVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSI 184
M+C+Q+ +N LR+ + ++K+S H PL YA QGVRY+KL+VILTTSI
Sbjct: 1 MACIQHSRNALRRIIAKETSLKSSDGAIH---------PLLYACQGVRYKKLEVILTTSI 51
Query: 185 DKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATK 364
+KLGKAG+TVKVAPG+FRNHLMPKLLAVPNI+K+ HL+ +QRKIYQ EE EEVK+V T
Sbjct: 52 EKLGKAGQTVKVAPGHFRNHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETM 111
Query: 365 ESKMKEYQMAANRLDRTKLVLR---KLAKKPLMKDDNGGTFIQEPVGKDEIVVEVARQIS 535
E KMKEY+ AA RL + +L R AK + + I PV KD+I+ EV RQ +
Sbjct: 112 EDKMKEYETAAKRLVKARLAFRVGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFN 171
Query: 536 VRIEPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
V+IEP+++ L +PL +GEFEVPLR P+SIP+PEGK +W L VKIRGK
Sbjct: 172 VQIEPDNVHLPSPLTALGEFEVPLRFPKSIPMPEGKVKWTLKVKIRGK 219
>ref|XP_002317788.1| hypothetical protein POPTR_0012s02440g [Populus trichocarpa]
gi|222858461|gb|EEE96008.1| hypothetical protein
POPTR_0012s02440g [Populus trichocarpa]
Length = 219
Score = 239 bits (610), Expect = 1e-60
Identities = 127/228 (55%), Positives = 162/228 (71%), Gaps = 6/228 (2%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLK---NVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSI 184
M+C+Q+ +N LR+ + ++K+S H PL YA QGVRY+KL+VILTTSI
Sbjct: 1 MACIQHSRNALRRIIAKETSLKSSDGAIH---------PLLYACQGVRYKKLEVILTTSI 51
Query: 185 DKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATK 364
+KLGKAG+TVKVAPG+FRNHLMPKLLAVPNI+K+ HL+ +QRKIYQ EE EEVK+V T
Sbjct: 52 EKLGKAGQTVKVAPGHFRNHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETM 111
Query: 365 ESKMKEYQMAANRLDRTKLVLR---KLAKKPLMKDDNGGTFIQEPVGKDEIVVEVARQIS 535
E KMKEY+ AA R + +L R AK + + I PV KD+I+ EV RQ +
Sbjct: 112 EDKMKEYETAAKRFVKARLAFRVGINTAKFRSRESKDDPIEILSPVTKDDILKEVTRQFN 171
Query: 536 VRIEPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
V+IEP+++ L +PL +GEFEVPLR P+SIPLPEGK +W L VKIRGK
Sbjct: 172 VQIEPDNVHLPSPLTALGEFEVPLRFPKSIPLPEGKVKWTLQVKIRGK 219
>ref|XP_006493612.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like isoform X2
[Citrus sinensis] gi|568881504|ref|XP_006493613.1|
PREDICTED: 50S ribosomal protein L9, chloroplastic-like
isoform X3 [Citrus sinensis]
Length = 218
Score = 232 bits (592), Expect = 1e-58
Identities = 117/225 (52%), Positives = 161/225 (71%), Gaps = 3/225 (1%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLKNVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSIDKL 193
M+ Q+ +N LRQ K + + HHPL Y+ QGVRYR+L+VILTT +DKL
Sbjct: 4 MAFTQHGRNALRQITK----------ESSDRVLHHPLLYSCQGVRYRRLEVILTTKVDKL 53
Query: 194 GKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATKESK 373
GKAGETVKVAPGYFRNHLMPKLLAVPNI+K+ HL+ +QR+I Q E EEVK++ ++++
Sbjct: 54 GKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRRICQPVEEEEVKVIRKSEDNM 113
Query: 374 MKEYQMAANRLDRTKLVLRK---LAKKPLMKDDNGGTFIQEPVGKDEIVVEVARQISVRI 544
+E++ AA RL+ +LVLR+ + K + + ++ PV K+E+V EV+RQ+S+ I
Sbjct: 114 SREFEKAARRLENARLVLRRFPNIEKLRSRESKDVPIELRSPVTKEELVAEVSRQLSISI 173
Query: 545 EPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
EPE+L L +PL GE+EVP+R+P++IPLPEGK QW L VK+RGK
Sbjct: 174 EPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNVKVRGK 218
>ref|XP_006493611.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like isoform X1
[Citrus sinensis]
Length = 319
Score = 232 bits (592), Expect = 1e-58
Identities = 117/225 (52%), Positives = 161/225 (71%), Gaps = 3/225 (1%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLKNVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSIDKL 193
M+ Q+ +N LRQ K + + HHPL Y+ QGVRYR+L+VILTT +DKL
Sbjct: 105 MAFTQHGRNALRQITK----------ESSDRVLHHPLLYSCQGVRYRRLEVILTTKVDKL 154
Query: 194 GKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATKESK 373
GKAGETVKVAPGYFRNHLMPKLLAVPNI+K+ HL+ +QR+I Q E EEVK++ ++++
Sbjct: 155 GKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRRICQPVEEEEVKVIRKSEDNM 214
Query: 374 MKEYQMAANRLDRTKLVLRK---LAKKPLMKDDNGGTFIQEPVGKDEIVVEVARQISVRI 544
+E++ AA RL+ +LVLR+ + K + + ++ PV K+E+V EV+RQ+S+ I
Sbjct: 215 SREFEKAARRLENARLVLRRFPNIEKLRSRESKDVPIELRSPVTKEELVAEVSRQLSISI 274
Query: 545 EPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
EPE+L L +PL GE+EVP+R+P++IPLPEGK QW L VK+RGK
Sbjct: 275 EPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNVKVRGK 319
>ref|XP_006442542.1| hypothetical protein CICLE_v10022175mg [Citrus clementina]
gi|557544804|gb|ESR55782.1| hypothetical protein
CICLE_v10022175mg [Citrus clementina]
Length = 218
Score = 232 bits (591), Expect = 2e-58
Identities = 119/227 (52%), Positives = 161/227 (70%), Gaps = 5/227 (2%)
Frame = +2
Query: 14 MSCLQYVKNTLRQQLKNVKTSSAIFHKGGEAHFHHPLFYAAQGVRYRKLQVILTTSIDKL 193
M+ Q+ +N LRQ K + + HHPL ++ QGVRYR+L+VILTT +DKL
Sbjct: 4 MAFTQHGRNALRQITK----------ESSDHVLHHPLLFSCQGVRYRRLEVILTTKVDKL 53
Query: 194 GKAGETVKVAPGYFRNHLMPKLLAVPNIDKYKHLMEDQRKIYQREEVEEVKIVPATKESK 373
GKAGETVKVAPGYFRNHLMPKLLAVPNI+K+ HL+ +QR+I Q E EEVK++ ++++
Sbjct: 54 GKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRRICQPVEEEEVKVIRKSEDNM 113
Query: 374 MKEYQMAANRLDRTKLVLRKL-----AKKPLMKDDNGGTFIQEPVGKDEIVVEVARQISV 538
+E++ AA RL+ +LVLR+ + KDD ++ PV K+E+V EVARQ+S+
Sbjct: 114 SREFEKAARRLENARLVLRRFPNIEKLRSRASKDD--PIELRAPVTKEELVAEVARQLSI 171
Query: 539 RIEPEHLVLDTPLHVMGEFEVPLRMPRSIPLPEGKTQWVLLVKIRGK 679
IEPE+L L +PL GE+EVP+R+P++IPLPEGK QW L VK+RGK
Sbjct: 172 SIEPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNVKVRGK 218