BLASTX nr result
ID: Atropa21_contig00020595
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00020595
(814 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAY54108.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 52 6e-09
dbj|BAM29176.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 50 1e-08
gb|AAA82535.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 50 2e-08
emb|CAD12534.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 50 2e-08
gb|AAL35683.1| ribulose 1,5-bisphosphate carboxylase [Pangium ed... 50 2e-08
gb|AAK71009.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 48 3e-08
gb|ACJ74496.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 47 3e-08
gb|AAC35147.1| ribulose-1,5-bisphosphate carboxylase/oxygenase [... 47 3e-08
gb|AAC35113.1| ribulose-1,5-bisphosphate carboxylase/oxygenase [... 47 3e-08
ref|XP_003599566.1| Ribulose bisphosphate carboxylase large chai... 50 3e-08
gb|ABI17959.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 46 5e-08
gb|AAL60346.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 49 5e-08
gb|AAL37066.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 49 5e-08
gb|AAQ75679.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 48 5e-08
gb|AFJ96602.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 46 5e-08
gb|AGN94824.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 46 5e-08
gb|AAM08604.1|AC092750_38 Putative rbcL; RuBisCO large subunit f... 48 6e-08
dbj|BAA04200.1| ribulose-1,5-bisphosphate carboxylase, large sub... 49 6e-08
gb|AAP94149.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 49 6e-08
gb|AAM33283.1| ribulose 1,5-biphosphate carboxylase large subuni... 49 6e-08
>gb|AAY54108.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[Peltophorum pterocarpum]
Length = 461
Score = 52.0 bits (123), Expect(2) = 6e-09
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = -1
Query: 241 GCPFMG---KLIIVLNVKGRTQFLYKGNT*AACLP--QPYLRFRNNINSQPFMCWIDRFL 77
GCP +G KL + L+ K + +Y+ CL + + N+NSQPFM W DRFL
Sbjct: 164 GCPLLGCTIKLKLGLSAKNYGRAVYE------CLXGGXDFTKDDENVNSQPFMRWRDRFL 217
Query: 76 FCAKAIYKS 50
FCA+AIYK+
Sbjct: 218 FCAEAIYKA 226
Score = 35.4 bits (80), Expect(2) = 6e-09
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KA ET EIKGHYLNATA
Sbjct: 218 FCAEAIYKAQAETGEIKGHYLNATA 242
>dbj|BAM29176.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Chlorodesmis sp. Tenija_050807E]
Length = 417
Score = 50.4 bits (119), Expect(2) = 1e-08
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Frame = -1
Query: 304 ITPLGVRPFLGP-----C*RWMLCAPGCPFMGKLI---IVLNVKGRTQFLYKGNT*AACL 149
I P ++ F GP R L GCPF+G I + L+ K + +Y+G
Sbjct: 116 IPPSYIKTFQGPPHGIQVERDKLNKYGCPFLGCTIKPKLGLSAKNYGRAVYEGLRGGL-- 173
Query: 148 PQPYLRFRNNINSQPFMCWIDRFLFCAKAIYKS 50
+ + N+NSQPFM W DRFLF A+AIYKS
Sbjct: 174 --DFTKDDENVNSQPFMRWRDRFLFVAEAIYKS 204
Score = 36.2 bits (82), Expect(2) = 1e-08
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
FV + K+ ET EIKGHYLNATA
Sbjct: 196 FVAEAIYKSQAETGEIKGHYLNATA 220
>gb|AAA82535.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[Chamerion angustifolium]
Length = 469
Score = 50.4 bits (119), Expect(2) = 2e-08
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Frame = -1
Query: 304 ITPLGVRPFLGP-----C*RWMLCAPGCPFMGKLI---IVLNVKGRTQFLYKGNT*AACL 149
I P V+ F GP R L GCP +G I + L+ K + +Y+ CL
Sbjct: 140 IPPAYVKTFQGPPHGIQVERDKLNKYGCPLLGCTIKPKLGLSAKNYGRAVYE------CL 193
Query: 148 PQ--PYLRFRNNINSQPFMCWIDRFLFCAKAIYKS 50
+ + N+NSQPFM W DRFLFCA+AIYK+
Sbjct: 194 RGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKA 228
Score = 35.4 bits (80), Expect(2) = 2e-08
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KA ET EIKGHYLNATA
Sbjct: 220 FCAEAIYKAQAETGEIKGHYLNATA 244
>emb|CAD12534.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[Pangium edule]
Length = 468
Score = 50.1 bits (118), Expect(2) = 2e-08
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = -1
Query: 121 NINSQPFMCWIDRFLFCAKAIYKS 50
N+NSQPFMCW DRF+FCA+AIYK+
Sbjct: 198 NVNSQPFMCWRDRFVFCAEAIYKA 221
Score = 35.4 bits (80), Expect(2) = 2e-08
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KA ET EIKGHYLNATA
Sbjct: 213 FCAEAIYKAQAETGEIKGHYLNATA 237
>gb|AAL35683.1| ribulose 1,5-bisphosphate carboxylase [Pangium edule]
Length = 440
Score = 50.1 bits (118), Expect(2) = 2e-08
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = -1
Query: 121 NINSQPFMCWIDRFLFCAKAIYKS 50
N+NSQPFMCW DRF+FCA+AIYK+
Sbjct: 184 NVNSQPFMCWRDRFVFCAEAIYKA 207
Score = 35.4 bits (80), Expect(2) = 2e-08
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KA ET EIKGHYLNATA
Sbjct: 199 FCAEAIYKAQAETGEIKGHYLNATA 223
>gb|AAK71009.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[Tristellateia sp. KMC-2001]
Length = 468
Score = 47.8 bits (112), Expect(2) = 3e-08
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -1
Query: 121 NINSQPFMCWIDRFLFCAKAIYKS 50
N+NSQPFM W DRFLFCA+AIYKS
Sbjct: 198 NVNSQPFMRWRDRFLFCAEAIYKS 221
Score = 37.4 bits (85), Expect(2) = 3e-08
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + K+H ET EIKGHYLNATA
Sbjct: 213 FCAEAIYKSHAETGEIKGHYLNATA 237
>gb|ACJ74496.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[Terminalia mantaly]
Length = 468
Score = 46.6 bits (109), Expect(2) = 3e-08
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -1
Query: 121 NINSQPFMCWIDRFLFCAKAIYKS 50
N+NSQPFM W DRFLFCA+AIYK+
Sbjct: 198 NVNSQPFMRWRDRFLFCAEAIYKA 221
Score = 38.5 bits (88), Expect(2) = 3e-08
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KAH ET EIKGHYLNATA
Sbjct: 213 FCAEAIYKAHAETGEIKGHYLNATA 237
>gb|AAC35147.1| ribulose-1,5-bisphosphate carboxylase/oxygenase [Telipogon
pogonostalix]
Length = 447
Score = 46.6 bits (109), Expect(2) = 3e-08
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -1
Query: 121 NINSQPFMCWIDRFLFCAKAIYKS 50
N+NSQPFM W DRFLFCA+AIYK+
Sbjct: 196 NVNSQPFMRWRDRFLFCAEAIYKA 219
Score = 38.5 bits (88), Expect(2) = 3e-08
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KAH ET EIKGHYLNATA
Sbjct: 211 FCAEAIYKAHAETGEIKGHYLNATA 235
>gb|AAC35113.1| ribulose-1,5-bisphosphate carboxylase/oxygenase [Neofinetia
falcata]
Length = 443
Score = 46.6 bits (109), Expect(2) = 3e-08
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -1
Query: 121 NINSQPFMCWIDRFLFCAKAIYKS 50
N+NSQPFM W DRFLFCA+AIYK+
Sbjct: 195 NVNSQPFMRWRDRFLFCAEAIYKA 218
Score = 38.5 bits (88), Expect(2) = 3e-08
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KAH ET EIKGHYLNATA
Sbjct: 210 FCAEAIYKAHAETGEIKGHYLNATA 234
>ref|XP_003599566.1| Ribulose bisphosphate carboxylase large chain [Medicago truncatula]
gi|355488614|gb|AES69817.1| Ribulose bisphosphate
carboxylase large chain [Medicago truncatula]
Length = 268
Score = 49.7 bits (117), Expect(2) = 3e-08
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = -1
Query: 241 GCPFMGKLI---IVLNVKGRTQFLYKGNT*AACLPQ--PYLRFRNNINSQPFMCWIDRFL 77
GCP +G I + L+ K + +Y+ CL + + N+NSQPFM W DRFL
Sbjct: 115 GCPLLGCTIKPKLGLSAKNYGRAVYE------CLRGGLDFTKVDENVNSQPFMRWRDRFL 168
Query: 76 FCAKAIYKS 50
FCA+AIYK+
Sbjct: 169 FCAEAIYKA 177
Score = 35.4 bits (80), Expect(2) = 3e-08
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KA ET EIKGHYLNATA
Sbjct: 169 FCAEAIYKAQAETGEIKGHYLNATA 193
>gb|ABI17959.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[Aptandra tubicina]
Length = 475
Score = 45.8 bits (107), Expect(2) = 5e-08
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 121 NINSQPFMCWIDRFLFCAKAIYKS 50
N+N QPFM W DRFLFCAKAIYK+
Sbjct: 205 NVNYQPFMRWRDRFLFCAKAIYKA 228
Score = 38.5 bits (88), Expect(2) = 5e-08
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNAT 4
F K KA VETSEIKGHYLNAT
Sbjct: 220 FCAKAIYKAQVETSEIKGHYLNAT 243
>gb|AAL60346.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[Polyspora speciosa]
Length = 463
Score = 48.9 bits (115), Expect(2) = 5e-08
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = -1
Query: 241 GCPFMGKLI---IVLNVKGRTQFLYKGNT*AACLPQ--PYLRFRNNINSQPFMCWIDRFL 77
GCP +G I + L+ K + +Y+ CL + + N+NSQPFM W DRFL
Sbjct: 154 GCPLLGCTIKPKLGLSAKNYGRAVYE------CLRGGLDFTKDDENVNSQPFMRWRDRFL 207
Query: 76 FCAKAIYKS 50
FCA+AIYK+
Sbjct: 208 FCAEAIYKA 216
Score = 35.4 bits (80), Expect(2) = 5e-08
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KA ET EIKGHYLNATA
Sbjct: 208 FCAEAIYKAQAETGEIKGHYLNATA 232
>gb|AAL37066.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[Tacca plantaginea]
Length = 459
Score = 48.9 bits (115), Expect(2) = 5e-08
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 241 GCPFMGKLIIVLNVKGRTQFLYKGNT*AACLPQ--PYLRFRNNINSQPFMCWIDRFLFCA 68
GC KL + GR + CLP + + N+NSQPFM W DRFLFCA
Sbjct: 171 GCTIQPKLGLSAKNYGRAVY--------ECLPGGLDFTKDDENVNSQPFMRWRDRFLFCA 222
Query: 67 KAIYKS 50
+AIYK+
Sbjct: 223 EAIYKA 228
Score = 35.4 bits (80), Expect(2) = 5e-08
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KA ET EIKGHYLNATA
Sbjct: 220 FCAEAIYKAQAETGEIKGHYLNATA 244
>gb|AAQ75679.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[Caroxylon vermiculatum]
Length = 447
Score = 48.1 bits (113), Expect(2) = 5e-08
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -1
Query: 121 NINSQPFMCWIDRFLFCAKAIYKS 50
N+NSQPFM W DRFLFCAKAIYK+
Sbjct: 184 NVNSQPFMRWRDRFLFCAKAIYKT 207
Score = 36.2 bits (82), Expect(2) = 5e-08
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F K K H T EIKGHYLNATA
Sbjct: 199 FCAKAIYKTHTXTGEIKGHYLNATA 223
>gb|AFJ96602.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial [Sacoglottis guianensis]
Length = 441
Score = 45.8 bits (107), Expect(2) = 5e-08
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -1
Query: 121 NINSQPFMCWIDRFLFCAKAIYKS 50
N+NSQPFM W DRFLFCA+A+YK+
Sbjct: 180 NVNSQPFMRWRDRFLFCAEALYKA 203
Score = 38.5 bits (88), Expect(2) = 5e-08
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KAH ET EIKGHYLNATA
Sbjct: 195 FCAEALYKAHAETGEIKGHYLNATA 219
>gb|AGN94824.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Viola canadensis]
Length = 432
Score = 45.8 bits (107), Expect(2) = 5e-08
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -1
Query: 121 NINSQPFMCWIDRFLFCAKAIYKS 50
N+NSQPFM W DRFLFCA+A+YK+
Sbjct: 194 NVNSQPFMRWRDRFLFCAEALYKA 217
Score = 38.5 bits (88), Expect(2) = 5e-08
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KAH ET EIKGHYLNATA
Sbjct: 209 FCAEALYKAHAETGEIKGHYLNATA 233
>gb|AAM08604.1|AC092750_38 Putative rbcL; RuBisCO large subunit from chromosome 10 chloroplast
insertion [Oryza sativa Japonica Group]
gi|21327364|gb|AAM48269.1|AC122148_22 Putative rbcL;
RuBisCO large subunit from chromosome 10 chloroplast
insertion [Oryza sativa Japonica Group]
Length = 477
Score = 48.1 bits (113), Expect(2) = 6e-08
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -1
Query: 121 NINSQPFMCWIDRFLFCAKAIYKS 50
N+NSQPFM W DRF+FCAKAIYKS
Sbjct: 205 NVNSQPFMRWRDRFVFCAKAIYKS 228
Score = 35.8 bits (81), Expect(2) = 6e-08
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F K K+ ET EIKGHYLNATA
Sbjct: 220 FCAKAIYKSQAETGEIKGHYLNATA 244
>dbj|BAA04200.1| ribulose-1,5-bisphosphate carboxylase, large subunit [Tricyrtis
affinis]
Length = 471
Score = 48.5 bits (114), Expect(2) = 6e-08
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 241 GCPFMGKLIIVLNVKGRTQFLYKGNT*AACLPQ--PYLRFRNNINSQPFMCWIDRFLFCA 68
GC KL + GR + CLP + + N+NSQPFM W DRFLFCA
Sbjct: 171 GCTIKPKLGLSAKNYGRAVY--------ECLPGGLDFTKDDENVNSQPFMRWRDRFLFCA 222
Query: 67 KAIYKS 50
+AIYK+
Sbjct: 223 EAIYKA 228
Score = 35.4 bits (80), Expect(2) = 6e-08
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KA ET EIKGHYLNATA
Sbjct: 220 FCAEAIYKAQAETGEIKGHYLNATA 244
>gb|AAP94149.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[Carpinus betulus]
Length = 459
Score = 48.5 bits (114), Expect(2) = 6e-08
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 241 GCPFMGKLIIVLNVKGRTQFLYKGNT*AACLPQ--PYLRFRNNINSQPFMCWIDRFLFCA 68
GC KL + GR + CLP + + N+NSQPFM W DRFLFCA
Sbjct: 155 GCTIKPKLGLSAKNYGRAVY--------ECLPGGLDFTKDDENVNSQPFMRWRDRFLFCA 206
Query: 67 KAIYKS 50
+AIYK+
Sbjct: 207 EAIYKA 212
Score = 35.4 bits (80), Expect(2) = 6e-08
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KA ET EIKGHYLNATA
Sbjct: 204 FCAEAIYKAQAETGEIKGHYLNATA 228
>gb|AAM33283.1| ribulose 1,5-biphosphate carboxylase large subunit [Stachys
byzantina]
Length = 450
Score = 48.5 bits (114), Expect(2) = 6e-08
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 241 GCPFMGKLIIVLNVKGRTQFLYKGNT*AACLPQ--PYLRFRNNINSQPFMCWIDRFLFCA 68
GC KL + GR + CLP + + N+NSQPFM W DRFLFCA
Sbjct: 164 GCTIKPKLGLSAKNYGRAVY--------ECLPGGLDFTKDDENVNSQPFMRWRDRFLFCA 215
Query: 67 KAIYKS 50
+AIYK+
Sbjct: 216 EAIYKA 221
Score = 35.4 bits (80), Expect(2) = 6e-08
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2
Query: 75 FVPKQFIKAHVETSEIKGHYLNATA 1
F + KA ET EIKGHYLNATA
Sbjct: 213 FCAEAIYKAQAETGEIKGHYLNATA 237