BLASTX nr result
ID: Atropa21_contig00020550
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00020550
(1157 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347066.1| PREDICTED: mediator of RNA polymerase II tra... 156 1e-35
ref|XP_006347065.1| PREDICTED: mediator of RNA polymerase II tra... 156 1e-35
ref|XP_004232849.1| PREDICTED: mediator of RNA polymerase II tra... 156 1e-35
ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Popu... 147 6e-33
ref|XP_002305019.2| hypothetical protein POPTR_0004s04040g [Popu... 147 6e-33
ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra... 147 8e-33
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra... 147 8e-33
gb|EOY28294.1| Sensitive to freezing 6 [Theobroma cacao] 146 1e-32
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm... 146 2e-32
ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II tra... 145 2e-32
ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II tra... 145 2e-32
ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citr... 145 2e-32
gb|EXB82792.1| hypothetical protein L484_012105 [Morus notabilis] 144 7e-32
ref|XP_006594603.1| PREDICTED: mediator of RNA polymerase II tra... 143 1e-31
ref|XP_003543060.2| PREDICTED: mediator of RNA polymerase II tra... 143 1e-31
gb|ESW31307.1| hypothetical protein PHAVU_002G227600g [Phaseolus... 141 6e-31
ref|XP_006377328.1| hypothetical protein POPTR_0011s04940g [Popu... 139 2e-30
ref|XP_004485759.1| PREDICTED: mediator of RNA polymerase II tra... 139 2e-30
ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II tra... 139 2e-30
ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II tra... 139 2e-30
>ref|XP_006347066.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Solanum tuberosum]
Length = 1040
Score = 156 bits (395), Expect = 1e-35
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+A ASPGGNPSA Q+EKEVWWISRWA
Sbjct: 967 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGGNPSANQHEKEVWWISRWA 1026
Query: 182 YGCPMCGGTWVRVV 223
GCPMCGGTWVRVV
Sbjct: 1027 CGCPMCGGTWVRVV 1040
>ref|XP_006347065.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Solanum tuberosum]
Length = 1244
Score = 156 bits (395), Expect = 1e-35
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+A ASPGGNPSA Q+EKEVWWISRWA
Sbjct: 1171 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGGNPSANQHEKEVWWISRWA 1230
Query: 182 YGCPMCGGTWVRVV 223
GCPMCGGTWVRVV
Sbjct: 1231 CGCPMCGGTWVRVV 1244
>ref|XP_004232849.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like [Solanum lycopersicum]
Length = 1246
Score = 156 bits (395), Expect = 1e-35
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+A ASPGGNPSA Q+EKEVWWISRWA
Sbjct: 1173 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGGNPSANQHEKEVWWISRWA 1232
Query: 182 YGCPMCGGTWVRVV 223
GCPMCGGTWVRVV
Sbjct: 1233 CGCPMCGGTWVRVV 1246
>ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Populus trichocarpa]
gi|550340281|gb|EEE86321.2| hypothetical protein
POPTR_0004s04050g [Populus trichocarpa]
Length = 1328
Score = 147 bits (372), Expect = 6e-33
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+ALASPG QNE+E WWISRWA
Sbjct: 1255 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSALASPGAANPPDQNEREAWWISRWA 1314
Query: 182 YGCPMCGGTWVRVV 223
YGCPMCGGTWVRVV
Sbjct: 1315 YGCPMCGGTWVRVV 1328
>ref|XP_002305019.2| hypothetical protein POPTR_0004s04040g [Populus trichocarpa]
gi|550340280|gb|EEE85530.2| hypothetical protein
POPTR_0004s04040g [Populus trichocarpa]
Length = 1236
Score = 147 bits (372), Expect = 6e-33
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+ALASPG QNE+E WWISRWA
Sbjct: 1163 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSALASPGAANPPDQNEREAWWISRWA 1222
Query: 182 YGCPMCGGTWVRVV 223
YGCPMCGGTWVRVV
Sbjct: 1223 YGCPMCGGTWVRVV 1236
>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like [Cucumis sativus]
Length = 1143
Score = 147 bits (371), Expect = 8e-33
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
+LGIMGSRRDVVTAVWKTGLEGVWYKC+RCLRQT+A ASPG TQNE+E WWISRWA
Sbjct: 1070 FLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQTSAFASPGATNDTTQNERETWWISRWA 1129
Query: 182 YGCPMCGGTWVRVV 223
YGCPMCGGTWVRVV
Sbjct: 1130 YGCPMCGGTWVRVV 1143
>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like [Cucumis sativus]
Length = 1220
Score = 147 bits (371), Expect = 8e-33
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
+LGIMGSRRDVVTAVWKTGLEGVWYKC+RCLRQT+A ASPG TQNE+E WWISRWA
Sbjct: 1147 FLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQTSAFASPGATNDTTQNERETWWISRWA 1206
Query: 182 YGCPMCGGTWVRVV 223
YGCPMCGGTWVRVV
Sbjct: 1207 YGCPMCGGTWVRVV 1220
>gb|EOY28294.1| Sensitive to freezing 6 [Theobroma cacao]
Length = 1249
Score = 146 bits (369), Expect = 1e-32
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+A ASPG +QNE+E WWISRWA
Sbjct: 1176 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGSTSQRSQNERETWWISRWA 1235
Query: 182 YGCPMCGGTWVRVV 223
+GCPMCGGTWVRVV
Sbjct: 1236 HGCPMCGGTWVRVV 1249
>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
gi|223541698|gb|EEF43246.1| conserved hypothetical
protein [Ricinus communis]
Length = 1255
Score = 146 bits (368), Expect = 2e-32
Identities = 63/74 (85%), Positives = 66/74 (89%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+A ASPG QN++E WWISRWA
Sbjct: 1182 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGATNPPNQNDREAWWISRWA 1241
Query: 182 YGCPMCGGTWVRVV 223
YGCPMCGGTWVRVV
Sbjct: 1242 YGCPMCGGTWVRVV 1255
>ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Citrus sinensis]
Length = 1057
Score = 145 bits (367), Expect = 2e-32
Identities = 63/74 (85%), Positives = 66/74 (89%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAA ASPG QN++E WWISRWA
Sbjct: 984 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWA 1043
Query: 182 YGCPMCGGTWVRVV 223
+GCPMCGGTWVRVV
Sbjct: 1044 FGCPMCGGTWVRVV 1057
>ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Citrus sinensis]
Length = 1255
Score = 145 bits (367), Expect = 2e-32
Identities = 63/74 (85%), Positives = 66/74 (89%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAA ASPG QN++E WWISRWA
Sbjct: 1182 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWA 1241
Query: 182 YGCPMCGGTWVRVV 223
+GCPMCGGTWVRVV
Sbjct: 1242 FGCPMCGGTWVRVV 1255
>ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citrus clementina]
gi|557551917|gb|ESR62546.1| hypothetical protein
CICLE_v10014062mg [Citrus clementina]
Length = 1252
Score = 145 bits (367), Expect = 2e-32
Identities = 63/74 (85%), Positives = 66/74 (89%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAA ASPG QN++E WWISRWA
Sbjct: 1179 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWA 1238
Query: 182 YGCPMCGGTWVRVV 223
+GCPMCGGTWVRVV
Sbjct: 1239 FGCPMCGGTWVRVV 1252
>gb|EXB82792.1| hypothetical protein L484_012105 [Morus notabilis]
Length = 225
Score = 144 bits (363), Expect = 7e-32
Identities = 62/74 (83%), Positives = 66/74 (89%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTA+WKTGLEGVWYKCIRCLRQT+A ASP + QNE+EVWWISRWA
Sbjct: 152 YLGIMGSRRDVVTAIWKTGLEGVWYKCIRCLRQTSAFASPDATNPSNQNEREVWWISRWA 211
Query: 182 YGCPMCGGTWVRVV 223
Y CPMCGGTWVRVV
Sbjct: 212 YSCPMCGGTWVRVV 225
>ref|XP_006594603.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Glycine max]
Length = 1055
Score = 143 bits (360), Expect = 1e-31
Identities = 60/74 (81%), Positives = 66/74 (89%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTA+WKTGLEG+WYKCIRCLRQT A ASP +QN++E+WWISRWA
Sbjct: 982 YLGIMGSRRDVVTALWKTGLEGIWYKCIRCLRQTCAFASPASTNLPSQNDREIWWISRWA 1041
Query: 182 YGCPMCGGTWVRVV 223
YGCPMCGGTWVRVV
Sbjct: 1042 YGCPMCGGTWVRVV 1055
>ref|XP_003543060.2| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Glycine max]
Length = 1226
Score = 143 bits (360), Expect = 1e-31
Identities = 60/74 (81%), Positives = 66/74 (89%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTA+WKTGLEG+WYKCIRCLRQT A ASP +QN++E+WWISRWA
Sbjct: 1153 YLGIMGSRRDVVTALWKTGLEGIWYKCIRCLRQTCAFASPASTNLPSQNDREIWWISRWA 1212
Query: 182 YGCPMCGGTWVRVV 223
YGCPMCGGTWVRVV
Sbjct: 1213 YGCPMCGGTWVRVV 1226
>gb|ESW31307.1| hypothetical protein PHAVU_002G227600g [Phaseolus vulgaris]
Length = 1241
Score = 141 bits (355), Expect = 6e-31
Identities = 59/74 (79%), Positives = 65/74 (87%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVTA WKTGLEGVWYKC+RC RQT+A ASP +PS T N++EVWWISRW
Sbjct: 1168 YLGIMGSRRDVVTATWKTGLEGVWYKCVRCQRQTSAFASPDASPSLTPNDREVWWISRWV 1227
Query: 182 YGCPMCGGTWVRVV 223
+GCPMCGGTW RVV
Sbjct: 1228 HGCPMCGGTWARVV 1241
>ref|XP_006377328.1| hypothetical protein POPTR_0011s04940g [Populus trichocarpa]
gi|550327616|gb|ERP55125.1| hypothetical protein
POPTR_0011s04940g [Populus trichocarpa]
Length = 1249
Score = 139 bits (351), Expect = 2e-30
Identities = 64/76 (84%), Positives = 67/76 (88%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPG--GNPSATQNEKEVWWISR 175
YLGIMGSRRDVVTA+WKTGLEGVWYKCIRCLRQT+A AS G NP QNE+E WWISR
Sbjct: 1175 YLGIMGSRRDVVTAMWKTGLEGVWYKCIRCLRQTSAFASTGAAANP-PNQNEREAWWISR 1233
Query: 176 WAYGCPMCGGTWVRVV 223
WAYGCPMCGGTWVRVV
Sbjct: 1234 WAYGCPMCGGTWVRVV 1249
>ref|XP_004485759.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X3 [Cicer arietinum]
Length = 1027
Score = 139 bits (351), Expect = 2e-30
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVT +WKTGLEGVWYKCIRCLRQT A ASPG QN++E+WW+SRWA
Sbjct: 954 YLGIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWA 1013
Query: 182 YGCPMCGGTWVRVV 223
YGCPMCGG W RVV
Sbjct: 1014 YGCPMCGGRWARVV 1027
>ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Cicer arietinum]
Length = 1047
Score = 139 bits (351), Expect = 2e-30
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVT +WKTGLEGVWYKCIRCLRQT A ASPG QN++E+WW+SRWA
Sbjct: 974 YLGIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWA 1033
Query: 182 YGCPMCGGTWVRVV 223
YGCPMCGG W RVV
Sbjct: 1034 YGCPMCGGRWARVV 1047
>ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Cicer arietinum]
Length = 1247
Score = 139 bits (351), Expect = 2e-30
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2
Query: 2 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
YLGIMGSRRDVVT +WKTGLEGVWYKCIRCLRQT A ASPG QN++E+WW+SRWA
Sbjct: 1174 YLGIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWA 1233
Query: 182 YGCPMCGGTWVRVV 223
YGCPMCGG W RVV
Sbjct: 1234 YGCPMCGGRWARVV 1247