BLASTX nr result

ID: Atropa21_contig00020550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00020550
         (1157 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347066.1| PREDICTED: mediator of RNA polymerase II tra...   156   1e-35
ref|XP_006347065.1| PREDICTED: mediator of RNA polymerase II tra...   156   1e-35
ref|XP_004232849.1| PREDICTED: mediator of RNA polymerase II tra...   156   1e-35
ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Popu...   147   6e-33
ref|XP_002305019.2| hypothetical protein POPTR_0004s04040g [Popu...   147   6e-33
ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra...   147   8e-33
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra...   147   8e-33
gb|EOY28294.1| Sensitive to freezing 6 [Theobroma cacao]              146   1e-32
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   146   2e-32
ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II tra...   145   2e-32
ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II tra...   145   2e-32
ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citr...   145   2e-32
gb|EXB82792.1| hypothetical protein L484_012105 [Morus notabilis]     144   7e-32
ref|XP_006594603.1| PREDICTED: mediator of RNA polymerase II tra...   143   1e-31
ref|XP_003543060.2| PREDICTED: mediator of RNA polymerase II tra...   143   1e-31
gb|ESW31307.1| hypothetical protein PHAVU_002G227600g [Phaseolus...   141   6e-31
ref|XP_006377328.1| hypothetical protein POPTR_0011s04940g [Popu...   139   2e-30
ref|XP_004485759.1| PREDICTED: mediator of RNA polymerase II tra...   139   2e-30
ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II tra...   139   2e-30
ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II tra...   139   2e-30

>ref|XP_006347066.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like isoform X2 [Solanum tuberosum]
          Length = 1040

 Score =  156 bits (395), Expect = 1e-35
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+A ASPGGNPSA Q+EKEVWWISRWA
Sbjct: 967  YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGGNPSANQHEKEVWWISRWA 1026

Query: 182  YGCPMCGGTWVRVV 223
             GCPMCGGTWVRVV
Sbjct: 1027 CGCPMCGGTWVRVV 1040


>ref|XP_006347065.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like isoform X1 [Solanum tuberosum]
          Length = 1244

 Score =  156 bits (395), Expect = 1e-35
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+A ASPGGNPSA Q+EKEVWWISRWA
Sbjct: 1171 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGGNPSANQHEKEVWWISRWA 1230

Query: 182  YGCPMCGGTWVRVV 223
             GCPMCGGTWVRVV
Sbjct: 1231 CGCPMCGGTWVRVV 1244


>ref|XP_004232849.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like [Solanum lycopersicum]
          Length = 1246

 Score =  156 bits (395), Expect = 1e-35
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+A ASPGGNPSA Q+EKEVWWISRWA
Sbjct: 1173 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGGNPSANQHEKEVWWISRWA 1232

Query: 182  YGCPMCGGTWVRVV 223
             GCPMCGGTWVRVV
Sbjct: 1233 CGCPMCGGTWVRVV 1246


>ref|XP_002305810.2| hypothetical protein POPTR_0004s04050g [Populus trichocarpa]
            gi|550340281|gb|EEE86321.2| hypothetical protein
            POPTR_0004s04050g [Populus trichocarpa]
          Length = 1328

 Score =  147 bits (372), Expect = 6e-33
 Identities = 65/74 (87%), Positives = 67/74 (90%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+ALASPG      QNE+E WWISRWA
Sbjct: 1255 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSALASPGAANPPDQNEREAWWISRWA 1314

Query: 182  YGCPMCGGTWVRVV 223
            YGCPMCGGTWVRVV
Sbjct: 1315 YGCPMCGGTWVRVV 1328


>ref|XP_002305019.2| hypothetical protein POPTR_0004s04040g [Populus trichocarpa]
            gi|550340280|gb|EEE85530.2| hypothetical protein
            POPTR_0004s04040g [Populus trichocarpa]
          Length = 1236

 Score =  147 bits (372), Expect = 6e-33
 Identities = 65/74 (87%), Positives = 67/74 (90%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+ALASPG      QNE+E WWISRWA
Sbjct: 1163 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSALASPGAANPPDQNEREAWWISRWA 1222

Query: 182  YGCPMCGGTWVRVV 223
            YGCPMCGGTWVRVV
Sbjct: 1223 YGCPMCGGTWVRVV 1236


>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like [Cucumis sativus]
          Length = 1143

 Score =  147 bits (371), Expect = 8e-33
 Identities = 63/74 (85%), Positives = 67/74 (90%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            +LGIMGSRRDVVTAVWKTGLEGVWYKC+RCLRQT+A ASPG     TQNE+E WWISRWA
Sbjct: 1070 FLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQTSAFASPGATNDTTQNERETWWISRWA 1129

Query: 182  YGCPMCGGTWVRVV 223
            YGCPMCGGTWVRVV
Sbjct: 1130 YGCPMCGGTWVRVV 1143


>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like [Cucumis sativus]
          Length = 1220

 Score =  147 bits (371), Expect = 8e-33
 Identities = 63/74 (85%), Positives = 67/74 (90%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            +LGIMGSRRDVVTAVWKTGLEGVWYKC+RCLRQT+A ASPG     TQNE+E WWISRWA
Sbjct: 1147 FLGIMGSRRDVVTAVWKTGLEGVWYKCMRCLRQTSAFASPGATNDTTQNERETWWISRWA 1206

Query: 182  YGCPMCGGTWVRVV 223
            YGCPMCGGTWVRVV
Sbjct: 1207 YGCPMCGGTWVRVV 1220


>gb|EOY28294.1| Sensitive to freezing 6 [Theobroma cacao]
          Length = 1249

 Score =  146 bits (369), Expect = 1e-32
 Identities = 63/74 (85%), Positives = 67/74 (90%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+A ASPG     +QNE+E WWISRWA
Sbjct: 1176 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGSTSQRSQNERETWWISRWA 1235

Query: 182  YGCPMCGGTWVRVV 223
            +GCPMCGGTWVRVV
Sbjct: 1236 HGCPMCGGTWVRVV 1249


>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
            gi|223541698|gb|EEF43246.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1255

 Score =  146 bits (368), Expect = 2e-32
 Identities = 63/74 (85%), Positives = 66/74 (89%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQT+A ASPG      QN++E WWISRWA
Sbjct: 1182 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGATNPPNQNDREAWWISRWA 1241

Query: 182  YGCPMCGGTWVRVV 223
            YGCPMCGGTWVRVV
Sbjct: 1242 YGCPMCGGTWVRVV 1255


>ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like isoform X2 [Citrus sinensis]
          Length = 1057

 Score =  145 bits (367), Expect = 2e-32
 Identities = 63/74 (85%), Positives = 66/74 (89%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAA ASPG      QN++E WWISRWA
Sbjct: 984  YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWA 1043

Query: 182  YGCPMCGGTWVRVV 223
            +GCPMCGGTWVRVV
Sbjct: 1044 FGCPMCGGTWVRVV 1057


>ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like isoform X1 [Citrus sinensis]
          Length = 1255

 Score =  145 bits (367), Expect = 2e-32
 Identities = 63/74 (85%), Positives = 66/74 (89%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAA ASPG      QN++E WWISRWA
Sbjct: 1182 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWA 1241

Query: 182  YGCPMCGGTWVRVV 223
            +GCPMCGGTWVRVV
Sbjct: 1242 FGCPMCGGTWVRVV 1255


>ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citrus clementina]
            gi|557551917|gb|ESR62546.1| hypothetical protein
            CICLE_v10014062mg [Citrus clementina]
          Length = 1252

 Score =  145 bits (367), Expect = 2e-32
 Identities = 63/74 (85%), Positives = 66/74 (89%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAA ASPG      QN++E WWISRWA
Sbjct: 1179 YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWA 1238

Query: 182  YGCPMCGGTWVRVV 223
            +GCPMCGGTWVRVV
Sbjct: 1239 FGCPMCGGTWVRVV 1252


>gb|EXB82792.1| hypothetical protein L484_012105 [Morus notabilis]
          Length = 225

 Score =  144 bits (363), Expect = 7e-32
 Identities = 62/74 (83%), Positives = 66/74 (89%)
 Frame = +2

Query: 2   YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
           YLGIMGSRRDVVTA+WKTGLEGVWYKCIRCLRQT+A ASP     + QNE+EVWWISRWA
Sbjct: 152 YLGIMGSRRDVVTAIWKTGLEGVWYKCIRCLRQTSAFASPDATNPSNQNEREVWWISRWA 211

Query: 182 YGCPMCGGTWVRVV 223
           Y CPMCGGTWVRVV
Sbjct: 212 YSCPMCGGTWVRVV 225


>ref|XP_006594603.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like isoform X2 [Glycine max]
          Length = 1055

 Score =  143 bits (360), Expect = 1e-31
 Identities = 60/74 (81%), Positives = 66/74 (89%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTA+WKTGLEG+WYKCIRCLRQT A ASP      +QN++E+WWISRWA
Sbjct: 982  YLGIMGSRRDVVTALWKTGLEGIWYKCIRCLRQTCAFASPASTNLPSQNDREIWWISRWA 1041

Query: 182  YGCPMCGGTWVRVV 223
            YGCPMCGGTWVRVV
Sbjct: 1042 YGCPMCGGTWVRVV 1055


>ref|XP_003543060.2| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like isoform X1 [Glycine max]
          Length = 1226

 Score =  143 bits (360), Expect = 1e-31
 Identities = 60/74 (81%), Positives = 66/74 (89%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTA+WKTGLEG+WYKCIRCLRQT A ASP      +QN++E+WWISRWA
Sbjct: 1153 YLGIMGSRRDVVTALWKTGLEGIWYKCIRCLRQTCAFASPASTNLPSQNDREIWWISRWA 1212

Query: 182  YGCPMCGGTWVRVV 223
            YGCPMCGGTWVRVV
Sbjct: 1213 YGCPMCGGTWVRVV 1226


>gb|ESW31307.1| hypothetical protein PHAVU_002G227600g [Phaseolus vulgaris]
          Length = 1241

 Score =  141 bits (355), Expect = 6e-31
 Identities = 59/74 (79%), Positives = 65/74 (87%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVTA WKTGLEGVWYKC+RC RQT+A ASP  +PS T N++EVWWISRW 
Sbjct: 1168 YLGIMGSRRDVVTATWKTGLEGVWYKCVRCQRQTSAFASPDASPSLTPNDREVWWISRWV 1227

Query: 182  YGCPMCGGTWVRVV 223
            +GCPMCGGTW RVV
Sbjct: 1228 HGCPMCGGTWARVV 1241


>ref|XP_006377328.1| hypothetical protein POPTR_0011s04940g [Populus trichocarpa]
            gi|550327616|gb|ERP55125.1| hypothetical protein
            POPTR_0011s04940g [Populus trichocarpa]
          Length = 1249

 Score =  139 bits (351), Expect = 2e-30
 Identities = 64/76 (84%), Positives = 67/76 (88%), Gaps = 2/76 (2%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPG--GNPSATQNEKEVWWISR 175
            YLGIMGSRRDVVTA+WKTGLEGVWYKCIRCLRQT+A AS G   NP   QNE+E WWISR
Sbjct: 1175 YLGIMGSRRDVVTAMWKTGLEGVWYKCIRCLRQTSAFASTGAAANP-PNQNEREAWWISR 1233

Query: 176  WAYGCPMCGGTWVRVV 223
            WAYGCPMCGGTWVRVV
Sbjct: 1234 WAYGCPMCGGTWVRVV 1249


>ref|XP_004485759.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like isoform X3 [Cicer arietinum]
          Length = 1027

 Score =  139 bits (351), Expect = 2e-30
 Identities = 58/74 (78%), Positives = 63/74 (85%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVT +WKTGLEGVWYKCIRCLRQT A ASPG      QN++E+WW+SRWA
Sbjct: 954  YLGIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWA 1013

Query: 182  YGCPMCGGTWVRVV 223
            YGCPMCGG W RVV
Sbjct: 1014 YGCPMCGGRWARVV 1027


>ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like isoform X2 [Cicer arietinum]
          Length = 1047

 Score =  139 bits (351), Expect = 2e-30
 Identities = 58/74 (78%), Positives = 63/74 (85%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVT +WKTGLEGVWYKCIRCLRQT A ASPG      QN++E+WW+SRWA
Sbjct: 974  YLGIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWA 1033

Query: 182  YGCPMCGGTWVRVV 223
            YGCPMCGG W RVV
Sbjct: 1034 YGCPMCGGRWARVV 1047


>ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            16-like isoform X1 [Cicer arietinum]
          Length = 1247

 Score =  139 bits (351), Expect = 2e-30
 Identities = 58/74 (78%), Positives = 63/74 (85%)
 Frame = +2

Query: 2    YLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTAALASPGGNPSATQNEKEVWWISRWA 181
            YLGIMGSRRDVVT +WKTGLEGVWYKCIRCLRQT A ASPG      QN++E+WW+SRWA
Sbjct: 1174 YLGIMGSRRDVVTTLWKTGLEGVWYKCIRCLRQTCAFASPGSTNLPNQNDREIWWVSRWA 1233

Query: 182  YGCPMCGGTWVRVV 223
            YGCPMCGG W RVV
Sbjct: 1234 YGCPMCGGRWARVV 1247


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