BLASTX nr result

ID: Atropa21_contig00020471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00020471
         (873 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323498.1| predicted protein [Populus trichocarpa]            67   1e-08
emb|CAN66966.1| hypothetical protein VITISV_043228 [Vitis vinifera]    58   5e-06

>ref|XP_002323498.1| predicted protein [Populus trichocarpa]
          Length = 115

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = +2

Query: 257 PTPLNHAHHFISLKLTSINYLF*KTQLIPFLRGQNLHGYIDGSKPCPS 400
           PT L   HHFI++KLT  NYL  + QLIP+LRGQNL GY+DGS PCP+
Sbjct: 18  PTQL---HHFITIKLTQDNYLLWRAQLIPYLRGQNLFGYLDGSVPCPA 62


>emb|CAN66966.1| hypothetical protein VITISV_043228 [Vitis vinifera]
          Length = 717

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 28/53 (52%), Positives = 35/53 (66%)
 Frame = +2

Query: 242 SSFYSPTPLNHAHHFISLKLTSINYLF*KTQLIPFLRGQNLHGYIDGSKPCPS 400
           SS  SP PLN   H +++KLTS NYL  + Q IP L  Q+L G++DGS P PS
Sbjct: 5   SSSSSPLPLNTMVHMLTIKLTSSNYLLWRNQFIPLLTSQDLLGFLDGSVPAPS 57


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