BLASTX nr result
ID: Atropa21_contig00020450
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00020450
(576 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350645.1| PREDICTED: parafibromin-like [Solanum tubero... 106 1e-44
ref|XP_004241043.1| PREDICTED: parafibromin-like isoform 1 [Sola... 108 2e-44
gb|AGH32907.1| RNA polymerase II accessory factor [Camellia olei... 87 4e-24
ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073... 78 6e-21
ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera] 79 2e-20
gb|EMJ23945.1| hypothetical protein PRUPE_ppa006499mg [Prunus pe... 80 9e-20
ref|XP_004511395.1| PREDICTED: parafibromin-like [Cicer arietinum] 74 5e-19
ref|XP_004297112.1| PREDICTED: parafibromin-like [Fragaria vesca... 77 2e-18
ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu... 74 2e-18
ref|XP_003537641.1| PREDICTED: parafibromin-like isoform X1 [Gly... 70 4e-18
ref|XP_002883372.1| predicted protein [Arabidopsis lyrata subsp.... 70 1e-16
ref|XP_002517109.1| conserved hypothetical protein [Ricinus comm... 74 1e-16
ref|NP_188898.1| protein PLANT HOMOLOGOUS TO PARAFIBROMIN [Arabi... 66 5e-16
gb|EXB63474.1| hypothetical protein L484_005437 [Morus notabilis] 69 1e-15
ref|XP_006297782.1| hypothetical protein CARUB_v10013819mg [Caps... 69 1e-15
ref|XP_002315762.1| RNA pol 2 accessory factor Cdc73 family prot... 65 1e-15
ref|XP_006406146.1| hypothetical protein EUTSA_v10020820mg [Eutr... 63 1e-14
ref|XP_006489423.1| PREDICTED: parafibromin-like isoform X1 [Cit... 64 2e-14
ref|XP_006419973.1| hypothetical protein CICLE_v10005124mg [Citr... 64 2e-14
ref|XP_006419972.1| hypothetical protein CICLE_v10005124mg [Citr... 64 2e-14
>ref|XP_006350645.1| PREDICTED: parafibromin-like [Solanum tuberosum]
Length = 393
Score = 106 bits (265), Expect(2) = 1e-44
Identities = 51/79 (64%), Positives = 57/79 (72%), Gaps = 16/79 (20%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPCTI----------------ETLINFIT 295
P TLLR+YTIRN+LHKI+RIGDDYR GNDY+FPCTI ETLINFIT
Sbjct: 3 PLTLLREYTIRNELHKIVRIGDDYRFGNDYTFPCTIETAYRSKHVQANQYTLETLINFIT 62
Query: 296 NHHLKHTDYIQQSEKTHLP 352
NHHLKHT+YIQQS +P
Sbjct: 63 NHHLKHTEYIQQSRSLRIP 81
Score = 99.4 bits (246), Expect(2) = 1e-44
Identities = 59/89 (66%), Positives = 65/89 (73%), Gaps = 8/89 (8%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPNDTSLPIS--------EVNVLGGGDVKVLENQNPQIPQNPIEL 489
GK ASSDSIEF KF Q NDT++P+S E NVLG DV+VLENQNP IEL
Sbjct: 97 GKTASSDSIEFLKFPQSNDTTVPVSVSAGVTGNEENVLG--DVRVLENQNP------IEL 148
Query: 490 IRAVEKPLKDRESILF*KNRDCYSVFTAA 576
I+A EKPLKDRE+ILF KNRD YSVFTAA
Sbjct: 149 IKAAEKPLKDREAILFCKNRDFYSVFTAA 177
>ref|XP_004241043.1| PREDICTED: parafibromin-like isoform 1 [Solanum lycopersicum]
gi|460390863|ref|XP_004241044.1| PREDICTED:
parafibromin-like isoform 2 [Solanum lycopersicum]
Length = 393
Score = 108 bits (269), Expect(2) = 2e-44
Identities = 52/79 (65%), Positives = 57/79 (72%), Gaps = 16/79 (20%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPCTI----------------ETLINFIT 295
P TLLR+YTIRNDLHKI+RIGDDYR GNDY+FPCTI ETLINFIT
Sbjct: 3 PLTLLREYTIRNDLHKIVRIGDDYRFGNDYTFPCTIETAYRSKHVQANRYTLETLINFIT 62
Query: 296 NHHLKHTDYIQQSEKTHLP 352
NHHLKHT+YIQQS +P
Sbjct: 63 NHHLKHTEYIQQSRSLRIP 81
Score = 97.4 bits (241), Expect(2) = 2e-44
Identities = 58/89 (65%), Positives = 64/89 (71%), Gaps = 8/89 (8%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPNDTSLPIS--------EVNVLGGGDVKVLENQNPQIPQNPIEL 489
GK ASSDSIEF KF Q NDTS+P+S E NV+ DV+VLENQNP IEL
Sbjct: 97 GKTASSDSIEFLKFPQSNDTSVPVSVSAGVTGNEENVMS--DVRVLENQNP------IEL 148
Query: 490 IRAVEKPLKDRESILF*KNRDCYSVFTAA 576
I+A EKPLKDRE+ILF KNRD YSVFTAA
Sbjct: 149 IKAAEKPLKDREAILFCKNRDFYSVFTAA 177
>gb|AGH32907.1| RNA polymerase II accessory factor [Camellia oleifera]
Length = 401
Score = 87.0 bits (214), Expect(2) = 4e-24
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P + LRD+TIRNDL KI+RIGD++R G DYSFPC ++ETLI+F+ NH
Sbjct: 3 PLSALRDFTIRNDLDKIVRIGDEFRFGGDYSFPCGVATAYRSKQGSLYSLETLISFVKNH 62
Query: 302 HLKHTDYIQQSEKTHLP 352
HLKHTDY+ + +LP
Sbjct: 63 HLKHTDYMHNARSHNLP 79
Score = 50.4 bits (119), Expect(2) = 4e-24
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Frame = +1
Query: 334 GKNASSDSIEFF-----KFL----QPNDTSLPISEVNVLGGGDVKVLENQNPQIPQNPIE 486
GK +SSDSI+F KF +P D SL ++ D V + ++ N +
Sbjct: 95 GKVSSSDSIQFLAPQNPKFTSDEYRPEDPSL--IQITPNDDNDFDVNDEIGARVSDNYMA 152
Query: 487 LIRAVEKPLKDRESILF*KNRDCYSVFTAA 576
+IRA+E+PLKDRE++L +NR+ Y V TAA
Sbjct: 153 MIRAMERPLKDRETMLECRNRNFYVVLTAA 182
>ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073460|gb|ACJ85089.1|
unknown [Medicago truncatula]
gi|355512117|gb|AES93740.1| Parafibromin [Medicago
truncatula] gi|388521181|gb|AFK48652.1| unknown
[Medicago truncatula]
Length = 398
Score = 78.2 bits (191), Expect(2) = 6e-21
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P TLLRD+TIR DL KI+R+ ++R G DY+FPC T+ETL+++I NH
Sbjct: 10 PLTLLRDFTIRGDLDKIVRLNGNFRFGEDYTFPCSLETAYRSTKGNRYTLETLVHYIKNH 69
Query: 302 HLKHTDYIQQSEKTHLP 352
HLKHT+Y Q + +P
Sbjct: 70 HLKHTEYFQNTLALGIP 86
Score = 48.5 bits (114), Expect(2) = 6e-21
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 343 ASSDSIEFFKFLQPNDTSLPIS--EVNVLGGGDVKVLENQNPQIPQNPIELIRAVEKPLK 516
+++DSIE+ QP+ P S + + D + E ++P P + I +IR EKPLK
Sbjct: 105 STTDSIEYLPE-QPSIPDEPSSHQQHSQFPNSDEIITELESP--PLDFISMIRTAEKPLK 161
Query: 517 DRESILF*KNRDCYSVFTAA 576
DRES+L KNRD YSV AA
Sbjct: 162 DRESLLECKNRDFYSVLVAA 181
>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
Length = 413
Score = 79.3 bits (194), Expect(2) = 2e-20
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P + LRD+T+R +L KI+R+GD++R G+DY+FPC T+ETL+ ++ NH
Sbjct: 3 PLSALRDFTVRGELDKIVRVGDEFRFGSDYTFPCSAETAYRSKQGNLYTLETLVYYVKNH 62
Query: 302 HLKHTDYIQQSEKTHLP 352
H+KHT+Y+Q + +P
Sbjct: 63 HIKHTEYLQSARTQRIP 79
Score = 45.8 bits (107), Expect(2) = 2e-20
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPNDTSLPISEVNVLGGGDVKVLENQNPQIPQNPIE--------- 486
GK AS+D+IEF P + + V+ D +L ++P ++ ++
Sbjct: 95 GKVASTDAIEFVVPQNPKIPDIGVDAVDEYRPEDPTLLAIRDPPGSEDALDNSRVRGFDN 154
Query: 487 -----LIRAVEKPLKDRESILF*KNRDCYSVFTAA 576
+IRA E+PLKDRES+L K RD YSV A+
Sbjct: 155 VDYISMIRASERPLKDRESLLECKQRDFYSVLMAS 189
>gb|EMJ23945.1| hypothetical protein PRUPE_ppa006499mg [Prunus persica]
Length = 409
Score = 80.1 bits (196), Expect(2) = 9e-20
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P + LRD+TIR +L KI+R+ D++R DYSFPC T+ETL+ ++TNH
Sbjct: 3 PLSALRDFTIRGELEKIVRVNDEFRFDTDYSFPCHAETAYRSKQGNLYTLETLLYYVTNH 62
Query: 302 HLKHTDYIQQSEKTHLP 352
HLKHTDYIQ + +P
Sbjct: 63 HLKHTDYIQSARTQGIP 79
Score = 42.7 bits (99), Expect(2) = 9e-20
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Frame = +1
Query: 334 GKNASSDSIEFF------------KFLQPNDTSLPISEVNVLGGGDVKVLENQNPQIPQN 477
GK +SSDSIEF L PN S ++ N G D +V + P +
Sbjct: 95 GKISSSDSIEFLLPPQNDAVHPKLPSLDPNVNSGINNDSNDYGTTDSRVFSQI--ETPVD 152
Query: 478 PIELIRAVEKPLKDRESILF*KNRDCYSVFTAA 576
+ LI + E+PLKDRE +L K R+ Y V T+A
Sbjct: 153 YMSLICSGERPLKDREGLLECKGRNFYGVLTSA 185
>ref|XP_004511395.1| PREDICTED: parafibromin-like [Cicer arietinum]
Length = 399
Score = 73.6 bits (179), Expect(2) = 5e-19
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P +LLRD+T+R DL KI+RI D+R G++Y+FP T+ETL+++I NH
Sbjct: 10 PLSLLRDFTMRGDLDKIVRINGDFRFGDEYTFPSSLETAYRSTKGNRYTLETLVHYIKNH 69
Query: 302 HLKHTDYIQQSEKTHLP 352
HLKHT+Y Q + +P
Sbjct: 70 HLKHTEYFQNTLALSIP 86
Score = 46.6 bits (109), Expect(2) = 5e-19
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Frame = +1
Query: 343 ASSDSIEFFKFLQPNDTSL--PISEVNVLGGGDVKVLENQNPQIPQNP----IELIRAVE 504
+++DSIE+ P + SL P S N + ++ + ++P I +IR VE
Sbjct: 105 STTDSIEYL----PEEPSLEDPSSLYNQQHQQSSLIPQSNEAVVVEDPPLDFISMIRTVE 160
Query: 505 KPLKDRESILF*KNRDCYSVFTAA 576
KPLKDRES+L KNRD Y V AA
Sbjct: 161 KPLKDRESLLECKNRDFYGVLVAA 184
>ref|XP_004297112.1| PREDICTED: parafibromin-like [Fragaria vesca subsp. vesca]
Length = 414
Score = 76.6 bits (187), Expect(2) = 2e-18
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P + LRD+TIR +L KI+R+ D+ RLG+DYSFPC T+ETL++++ NH
Sbjct: 3 PLSALRDFTIRGELDKIVRVNDELRLGSDYSFPCSAETAYRSKQGNLYTLETLLHYVNNH 62
Query: 302 HLKHTDYIQQSEKTHLP 352
HLKHT+Y+ + +P
Sbjct: 63 HLKHTEYLINARAQMIP 79
Score = 41.6 bits (96), Expect(2) = 2e-18
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPNDTSLPISEVNVLGGGDVKVLENQNP----------------Q 465
GK +SSDSIEF P LP+ N + V + P +
Sbjct: 95 GKISSSDSIEFVLPQNPKVPDLPLHN-NDFPFSENDVARHHTPDQNHNNINGFTVLKEVE 153
Query: 466 IPQNPIELIRAVEKPLKDRESILF*KNRDCYSVFTAA 576
P + + LI E+PLKDRE +L K R+ Y V TAA
Sbjct: 154 APVDYMSLIYGSERPLKDREELLECKGRNFYGVLTAA 190
>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
gi|449513423|ref|XP_004164322.1| PREDICTED:
parafibromin-like [Cucumis sativus]
Length = 407
Score = 73.6 bits (179), Expect(2) = 2e-18
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 14/71 (19%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P + LRD+TIR +L KI+R+ D++R +DYSFPC T+ETL+ +I NH
Sbjct: 3 PLSALRDFTIRGELDKIVRVNDEFRFASDYSFPCSVETAYRSKQGNLYTLETLVYYIKNH 62
Query: 302 HLKHTDYIQQS 334
H+KHT+Y+Q +
Sbjct: 63 HVKHTEYLQNA 73
Score = 44.7 bits (104), Expect(2) = 2e-18
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPNDTSLPI-----SEVNVLGGGDVKVLENQNPQIPQNPIE---L 489
GK +SSD+IEF P LP E V+ G + ++ + ++ +
Sbjct: 95 GKVSSSDAIEFLVPQNPKFPDLPSVDEYRPEDPVIVGAAMDAVDEDDGFKDSTNVDYMTM 154
Query: 490 IRAVEKPLKDRESILF*KNRDCYSV 564
IRA+E+PLKDRES+L KNR+ Y+V
Sbjct: 155 IRAIERPLKDRESLLECKNRNFYNV 179
>ref|XP_003537641.1| PREDICTED: parafibromin-like isoform X1 [Glycine max]
gi|571486641|ref|XP_006590411.1| PREDICTED:
parafibromin-like isoform X2 [Glycine max]
gi|571486643|ref|XP_006590412.1| PREDICTED:
parafibromin-like isoform X3 [Glycine max]
Length = 389
Score = 70.5 bits (171), Expect(2) = 4e-18
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P + LR++T+R ++ KI+R+ ++R G +Y+FPC T+ETL+++I NH
Sbjct: 3 PLSALREFTMRGEVEKIVRVNAEFRFGEEYTFPCWVETAYRSTKGNRYTLETLVHYIQNH 62
Query: 302 HLKHTDYIQQSEKTHLP 352
HLKHT+YIQ + +P
Sbjct: 63 HLKHTEYIQNTFAVGIP 79
Score = 46.6 bits (109), Expect(2) = 4e-18
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPNDTSLPISEVNVLGGGDVKVLENQNPQIPQNPIEL-----IRA 498
G +SSDSIE+ P+ P S N P +P + L IR+
Sbjct: 95 GTLSSSDSIEYRPHDDPSSFPAPKSTPNP-------------PSLPPEDLNLDFISMIRS 141
Query: 499 VEKPLKDRESILF*KNRDCYSVFTAA 576
EKPLKDR+S+L KNRD YSV +A
Sbjct: 142 AEKPLKDRQSLLECKNRDFYSVLVSA 167
>ref|XP_002883372.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329212|gb|EFH59631.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 414
Score = 69.7 bits (169), Expect(2) = 1e-16
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P ++L+D+TIR D+ KI R+G +YR G++YSFPC T+E L++++ N
Sbjct: 3 PLSVLKDFTIRGDVDKIERVGVNYRFGSEYSFPCATETAYRSKSGSLYTLEALVHYVKNQ 62
Query: 302 HLKHTDYIQQSEKTHLP 352
HLKH +Y+Q + K +P
Sbjct: 63 HLKHGEYMQSTVKNSVP 79
Score = 42.4 bits (98), Expect(2) = 1e-16
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPN--------------DTSLPISEVNVLGGGDVKVLENQNPQIP 471
G+ ASSDSI++ Q N D S +S N + +V+ +
Sbjct: 95 GRVASSDSIDYLLLQQQNAQSQKQNEEYRPDQDNSAFVSRENAIEDMEVEDFGKSGEDVD 154
Query: 472 QNPIELIRAVEKPLKDRESILF*KNRDCYSV 564
I LIR+ E+PLK R++IL KNRD YSV
Sbjct: 155 Y--IMLIRSNERPLKSRDAILQCKNRDFYSV 183
>ref|XP_002517109.1| conserved hypothetical protein [Ricinus communis]
gi|223543744|gb|EEF45272.1| conserved hypothetical
protein [Ricinus communis]
Length = 409
Score = 73.6 bits (179), Expect(2) = 1e-16
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P + LRD+T+RND+ KI+RI D++R N+Y+FPC T+ETL+ +I N
Sbjct: 3 PLSALRDFTMRNDVDKIVRINDEFRFSNEYTFPCNIKTAYRSKQGNLYTLETLVYYIQNS 62
Query: 302 HLKHTDYIQQSEKTHLP 352
HLK TDY+Q + LP
Sbjct: 63 HLKFTDYLQHARAAGLP 79
Score = 38.5 bits (88), Expect(2) = 1e-16
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPN-----DTSLPISEV------NVLGGGDVKVLENQNPQIPQNP 480
GK +S+DSI F PN D L + V N DV N N
Sbjct: 95 GKVSSTDSIVFPLPQNPNPNLDLDNDLNSNAVLDSTINNNSADADVASGGGGNNVKEDNL 154
Query: 481 IELIRAVEKPLKDRESILF*KNRDCYSVFTAA 576
I +I ++E+P+KDRE++L K +D YSV A+
Sbjct: 155 ISIIYSMERPIKDREALLECKTKDFYSVLVAS 186
>ref|NP_188898.1| protein PLANT HOMOLOGOUS TO PARAFIBROMIN [Arabidopsis thaliana]
gi|11994291|dbj|BAB01474.1| unnamed protein product
[Arabidopsis thaliana] gi|17529302|gb|AAL38878.1|
unknown protein [Arabidopsis thaliana]
gi|23296828|gb|AAN13180.1| unknown protein [Arabidopsis
thaliana] gi|332643135|gb|AEE76656.1| Paf1 complex
subunit parafibromin-like protein [Arabidopsis thaliana]
Length = 415
Score = 65.9 bits (159), Expect(2) = 5e-16
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P ++L+++TIR D+ KI R+G +YR G++YSFPC T+E L++++ N
Sbjct: 3 PLSVLKEFTIRGDIDKIERVGANYRFGSEYSFPCATETAYRSKSGSLYTLEALVHYVKNQ 62
Query: 302 HLKHTDYIQQSEKTHLP 352
LKH +Y+Q + K +P
Sbjct: 63 QLKHGEYMQSTVKNSVP 79
Score = 44.3 bits (103), Expect(2) = 5e-16
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPN--------------DTSLPISEVNVLGGGDVKVLENQNPQIP 471
G+ ASSDSI+F Q N D S +S N + +V+ +
Sbjct: 95 GRVASSDSIDFLLLQQQNAQSQKQNEEYRPDQDNSAFVSRENAIADMEVEDFGKSGEDVD 154
Query: 472 QNPIELIRAVEKPLKDRESILF*KNRDCYSV 564
I LIR+ E+PLK R++IL KNRD YSV
Sbjct: 155 Y--IMLIRSNERPLKSRDAILQCKNRDFYSV 183
>gb|EXB63474.1| hypothetical protein L484_005437 [Morus notabilis]
Length = 452
Score = 68.6 bits (166), Expect(2) = 1e-15
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P + LRD+TIR +L KI R D++R G+D+SFPC T+ETL+ +I NH
Sbjct: 3 PLSALRDFTIRGELDKISRFNDEFRFGSDFSFPCSTPTAFRSKQGNLYTLETLVYYIKNH 62
Query: 302 HLKHTDYIQQSEKTHLP 352
KHT+Y+Q + P
Sbjct: 63 QAKHTEYLQNARTQGFP 79
Score = 40.4 bits (93), Expect(2) = 1e-15
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPNDTSLPI-SEVN-------VLGGGDVKVLENQNPQIPQNPIE- 486
GK ++SDSIEF P PI S V+ VLG ++ ++ +E
Sbjct: 95 GKVSTSDSIEFLVPQNPRFPDPPIPSSVDEYRPDDVVLGDAVEHGAVDERARVGDGELEK 154
Query: 487 -----LIRAVEKPLKDRESILF*KNRDCYSVFTAA 576
+IRA E+PLKDRE++L K R+ ++V TA+
Sbjct: 155 VDFMAMIRASERPLKDREALLECKGRNFHAVLTAS 189
>ref|XP_006297782.1| hypothetical protein CARUB_v10013819mg [Capsella rubella]
gi|482566491|gb|EOA30680.1| hypothetical protein
CARUB_v10013819mg [Capsella rubella]
Length = 414
Score = 68.6 bits (166), Expect(2) = 1e-15
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P ++L+D+T+R D+ KI R+G +YR G++YSFPC T+E L+++ N
Sbjct: 3 PLSVLKDFTVRGDVDKIERVGANYRFGSEYSFPCATETAYRSKGGTLYTLEALVHYAKNQ 62
Query: 302 HLKHTDYIQQSEKTHLP 352
HLKH +Y+Q + K+ +P
Sbjct: 63 HLKHGEYMQSTVKSSVP 79
Score = 40.4 bits (93), Expect(2) = 1e-15
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPN--------------DTSLPISEVNVLGGGDVKVLENQNPQIP 471
G+ ASSDSI++ Q N D S +S + + +V+ +
Sbjct: 95 GRVASSDSIDYLLLQQQNAQSQKQNEEYRPDQDNSAFVSRESAIEDMEVEDFGKSGEDVD 154
Query: 472 QNPIELIRAVEKPLKDRESILF*KNRDCYSV 564
I LIR+ E+PLK R++IL KNRD YSV
Sbjct: 155 Y--IMLIRSNERPLKSRDAILQCKNRDFYSV 183
>ref|XP_002315762.1| RNA pol 2 accessory factor Cdc73 family protein [Populus
trichocarpa] gi|222864802|gb|EEF01933.1| RNA pol 2
accessory factor Cdc73 family protein [Populus
trichocarpa]
Length = 405
Score = 65.5 bits (158), Expect(2) = 1e-15
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P + LRD+TIR DL KIIRI D++R GN+Y+FPC T+ETL+ I N
Sbjct: 3 PLSALRDFTIRGDLDKIIRINDEFRFGNEYTFPCSTKTAYRSKQGNLYTLETLVYCIQNT 62
Query: 302 HLKHTDYIQQSEKTHLP 352
+K T+Y+Q + +P
Sbjct: 63 KIKFTNYLQDALALGIP 79
Score = 43.5 bits (101), Expect(2) = 1e-15
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Frame = +1
Query: 334 GKNASSDSIEF---------FKFLQPNDTSLPISEVNVLGGGDVKVLENQNPQIPQNPIE 486
GK +S+DSI F +P+D L S ++ D + N N + +N +
Sbjct: 95 GKLSSTDSIVFPLPQESQNPNLNYRPDDPMLLDSRIDDSAAADK--VNNGNEGV-ENHVS 151
Query: 487 LIRAVEKPLKDRESILF*KNRDCYSVFTAA 576
LI A E+PLKDRES+L KNRD Y V A+
Sbjct: 152 LIYANERPLKDRESLLECKNRDFYGVLVAS 181
>ref|XP_006406146.1| hypothetical protein EUTSA_v10020820mg [Eutrema salsugineum]
gi|557107292|gb|ESQ47599.1| hypothetical protein
EUTSA_v10020820mg [Eutrema salsugineum]
Length = 414
Score = 63.2 bits (152), Expect(2) = 1e-14
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPC--------------TIETLINFITNH 301
P ++L+++T R DL KI R+G +YR G++YSFPC T+E L++++ N
Sbjct: 3 PLSVLKNFTTRGDLDKIERVGANYRFGSEYSFPCATETAYRSKGGTLYTLEALVHYVKNQ 62
Query: 302 HLKHTDYIQQSEKTHLP 352
HLK +Y+Q + K +P
Sbjct: 63 HLKPGEYMQSTVKNAVP 79
Score = 42.0 bits (97), Expect(2) = 1e-14
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Frame = +1
Query: 334 GKNASSDSIEFFKFLQPN--------------DTSLPISEVNVLGGGDVKVLENQNPQIP 471
G+ ASSDSI+F Q N D S +S + + +V+ +
Sbjct: 95 GRVASSDSIDFLLLQQQNAQSQKQNEEYRPDQDNSTFVSRESAIDDMEVEDFGKSGEDVD 154
Query: 472 QNPIELIRAVEKPLKDRESILF*KNRDCYSV 564
I LIR+ E+PLK R++IL KNRD YSV
Sbjct: 155 Y--IMLIRSNERPLKSRDAILQCKNRDFYSV 183
>ref|XP_006489423.1| PREDICTED: parafibromin-like isoform X1 [Citrus sinensis]
gi|568872537|ref|XP_006489424.1| PREDICTED:
parafibromin-like isoform X2 [Citrus sinensis]
Length = 398
Score = 64.3 bits (155), Expect(2) = 2e-14
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPCTIE--------------TLINFITNH 301
P + LRD+TIR++L K+ + GD+ G+DY+FP +IE T++ FI ++
Sbjct: 3 PLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAYRSKQGNLYTLQTVVYFIKHY 62
Query: 302 HLKHTDYIQQSEKTHLP 352
+LKHTDYIQ++ LP
Sbjct: 63 NLKHTDYIQRARSNKLP 79
Score = 40.4 bits (93), Expect(2) = 2e-14
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 403 ISEVNVLGGGDVKVLENQNPQIPQNPIELIRAVEKPLKDRESILF*KNRDCYSVFTAA 576
I+ +VL G + + + + I LIRA E+PLKDRE++L K D YSV ++
Sbjct: 107 IANDHVLNDGKIVETDGGGDDLELDDISLIRACERPLKDREALLECKGIDFYSVLVSS 164
>ref|XP_006419973.1| hypothetical protein CICLE_v10005124mg [Citrus clementina]
gi|567853621|ref|XP_006419974.1| hypothetical protein
CICLE_v10005124mg [Citrus clementina]
gi|567853627|ref|XP_006419977.1| hypothetical protein
CICLE_v10005124mg [Citrus clementina]
gi|557521846|gb|ESR33213.1| hypothetical protein
CICLE_v10005124mg [Citrus clementina]
gi|557521847|gb|ESR33214.1| hypothetical protein
CICLE_v10005124mg [Citrus clementina]
gi|557521850|gb|ESR33217.1| hypothetical protein
CICLE_v10005124mg [Citrus clementina]
Length = 395
Score = 64.3 bits (155), Expect(2) = 2e-14
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPCTIE--------------TLINFITNH 301
P + LRD+TIR++L K+ + GD+ G+DY+FP +IE T++ FI ++
Sbjct: 3 PLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAYRSKQGNLYTLQTVVYFIKHY 62
Query: 302 HLKHTDYIQQSEKTHLP 352
+LKHTDYIQ++ LP
Sbjct: 63 NLKHTDYIQRARSNKLP 79
Score = 40.4 bits (93), Expect(2) = 2e-14
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 403 ISEVNVLGGGDVKVLENQNPQIPQNPIELIRAVEKPLKDRESILF*KNRDCYSVFTAA 576
I+ +VL G + + + + I LIRA E+PLKDRE++L K D YSV ++
Sbjct: 107 IANDHVLNDGKIVETDGGGDDLELDDISLIRACERPLKDREALLECKGIDFYSVLVSS 164
>ref|XP_006419972.1| hypothetical protein CICLE_v10005124mg [Citrus clementina]
gi|567853623|ref|XP_006419975.1| hypothetical protein
CICLE_v10005124mg [Citrus clementina]
gi|567853625|ref|XP_006419976.1| hypothetical protein
CICLE_v10005124mg [Citrus clementina]
gi|557521845|gb|ESR33212.1| hypothetical protein
CICLE_v10005124mg [Citrus clementina]
gi|557521848|gb|ESR33215.1| hypothetical protein
CICLE_v10005124mg [Citrus clementina]
gi|557521849|gb|ESR33216.1| hypothetical protein
CICLE_v10005124mg [Citrus clementina]
Length = 378
Score = 64.3 bits (155), Expect(2) = 2e-14
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 14/77 (18%)
Frame = +2
Query: 164 PWTLLRDYTIRNDLHKIIRIGDDYRLGNDYSFPCTIE--------------TLINFITNH 301
P + LRD+TIR++L K+ + GD+ G+DY+FP +IE T++ FI ++
Sbjct: 3 PLSALRDFTIRSELDKVTQTGDEILFGSDYTFPSSIETAYRSKQGNLYTLQTVVYFIKHY 62
Query: 302 HLKHTDYIQQSEKTHLP 352
+LKHTDYIQ++ LP
Sbjct: 63 NLKHTDYIQRARSNKLP 79
Score = 40.4 bits (93), Expect(2) = 2e-14
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 403 ISEVNVLGGGDVKVLENQNPQIPQNPIELIRAVEKPLKDRESILF*KNRDCYSVFTAA 576
I+ +VL G + + + + I LIRA E+PLKDRE++L K D YSV ++
Sbjct: 107 IANDHVLNDGKIVETDGGGDDLELDDISLIRACERPLKDREALLECKGIDFYSVLVSS 164