BLASTX nr result
ID: Atropa21_contig00020412
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00020412
(483 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation spec... 209 4e-52
ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation spec... 207 2e-51
ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation spec... 199 3e-49
ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation spec... 198 5e-49
ref|XP_004156192.1| PREDICTED: cleavage and polyadenylation spec... 184 1e-44
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec... 184 1e-44
ref|XP_006415471.1| hypothetical protein EUTSA_v10007064mg [Eutr... 183 2e-44
ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arab... 180 2e-43
gb|EPS64393.1| hypothetical protein M569_10389, partial [Genlise... 180 2e-43
ref|XP_002300333.2| zinc finger family protein [Populus trichoca... 179 4e-43
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm... 179 4e-43
ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citr... 178 6e-43
ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citr... 178 6e-43
gb|EOX96971.1| Cleavage and polyadenylation specificity factor 3... 178 8e-43
ref|XP_006306994.1| hypothetical protein CARUB_v10008570mg [Caps... 177 1e-42
ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation spec... 177 2e-42
ref|NP_001077629.1| cleavage and polyadenylation specificity fac... 177 2e-42
ref|NP_174334.2| cleavage and polyadenylation specificity factor... 177 2e-42
ref|XP_006377637.1| hypothetical protein POPTR_0011s09220g [Popu... 175 5e-42
ref|XP_006846022.1| hypothetical protein AMTR_s00155p00079840 [A... 172 3e-41
>ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum lycopersicum]
Length = 671
Score = 209 bits (531), Expect = 4e-52
Identities = 103/129 (79%), Positives = 105/129 (81%), Gaps = 2/129 (1%)
Frame = +3
Query: 102 MDDG-GGLSFDFEGGLDTVPTHPTASVPVIQP-PTPNAYNTPVLTXXXXXXXXXXXXXSF 275
MDDG GGL+FDFEGGLDT PTHPTASVPVIQ P PNA V SF
Sbjct: 1 MDDGEGGLNFDFEGGLDTGPTHPTASVPVIQAGPAPNA---SVAVVPPGGGVGLGGDGSF 57
Query: 276 VGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTN 455
VGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTN
Sbjct: 58 VGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTN 117
Query: 456 EDIKECNMY 482
EDIKECNM+
Sbjct: 118 EDIKECNMF 126
>ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum tuberosum]
Length = 677
Score = 207 bits (526), Expect = 2e-51
Identities = 102/132 (77%), Positives = 104/132 (78%), Gaps = 5/132 (3%)
Frame = +3
Query: 102 MDDG-GGLSFDFEGGLDTVPTHPTASVPVIQPP----TPNAYNTPVLTXXXXXXXXXXXX 266
MDDG GGL+FDFEGGLDT PTHPTASVPV+Q T A N V
Sbjct: 1 MDDGEGGLNFDFEGGLDTGPTHPTASVPVLQSAGHITTGPAPNASVALVPPGGGVGQGGD 60
Query: 267 XSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK 446
SFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK
Sbjct: 61 GSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK 120
Query: 447 HTNEDIKECNMY 482
HTNEDIKECNMY
Sbjct: 121 HTNEDIKECNMY 132
>ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum lycopersicum]
Length = 689
Score = 199 bits (506), Expect = 3e-49
Identities = 97/130 (74%), Positives = 103/130 (79%), Gaps = 3/130 (2%)
Frame = +3
Query: 102 MDDG-GGLSFDFEGGLDTVPTHPTASVPVIQP--PTPNAYNTPVLTXXXXXXXXXXXXXS 272
MD+G GGL+FDFEGGLDT PTHPTASVPVIQ T A ++ +
Sbjct: 1 MDEGEGGLNFDFEGGLDTGPTHPTASVPVIQSFDHTAAAASSANINPPTVPAVGGQGDVG 60
Query: 273 FVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 452
FVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHT
Sbjct: 61 FVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHT 120
Query: 453 NEDIKECNMY 482
EDIKECNMY
Sbjct: 121 IEDIKECNMY 130
>ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum tuberosum]
Length = 692
Score = 198 bits (504), Expect = 5e-49
Identities = 98/131 (74%), Positives = 101/131 (77%), Gaps = 4/131 (3%)
Frame = +3
Query: 102 MDDG-GGLSFDFEGGLDTVPTHPTASVPVIQPPTPNAYNTPVLTXXXXXXXXXXXXXS-- 272
MD+G GGL+FDFEGGLDT PTHPTASVPVIQ A P S
Sbjct: 1 MDEGEGGLNFDFEGGLDTGPTHPTASVPVIQSFDHTAAAAPSANINPPTVSAAVGGQSDV 60
Query: 273 -FVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKH 449
FVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKH
Sbjct: 61 GFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKH 120
Query: 450 TNEDIKECNMY 482
T EDIKECNMY
Sbjct: 121 TIEDIKECNMY 131
>ref|XP_004156192.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 379
Score = 184 bits (467), Expect = 1e-44
Identities = 91/135 (67%), Positives = 99/135 (73%), Gaps = 9/135 (6%)
Frame = +3
Query: 105 DDGGGLSFDFEGGLDTVPTHP--TASVPVIQ-----PPTPNAYNTPV--LTXXXXXXXXX 257
D G LSFDFEGGLD PT+P T+S+P+I PP +A + P+
Sbjct: 3 DSEGVLSFDFEGGLDAGPTNPAATSSLPIINSDSSAPPAASAVSNPLSGALGPAVSAEPT 62
Query: 258 XXXXSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 437
VGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDC
Sbjct: 63 GAPHGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDC 122
Query: 438 VYKHTNEDIKECNMY 482
VYKHTNEDIKECNMY
Sbjct: 123 VYKHTNEDIKECNMY 137
>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 707
Score = 184 bits (467), Expect = 1e-44
Identities = 91/135 (67%), Positives = 99/135 (73%), Gaps = 9/135 (6%)
Frame = +3
Query: 105 DDGGGLSFDFEGGLDTVPTHP--TASVPVIQ-----PPTPNAYNTPV--LTXXXXXXXXX 257
D G LSFDFEGGLD PT+P T+S+P+I PP +A + P+
Sbjct: 3 DSEGVLSFDFEGGLDAGPTNPAATSSLPIINSDSSAPPAASAVSNPLSGALGPAVSAEPT 62
Query: 258 XXXXSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 437
VGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDC
Sbjct: 63 GAPHGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDC 122
Query: 438 VYKHTNEDIKECNMY 482
VYKHTNEDIKECNMY
Sbjct: 123 VYKHTNEDIKECNMY 137
>ref|XP_006415471.1| hypothetical protein EUTSA_v10007064mg [Eutrema salsugineum]
gi|557093242|gb|ESQ33824.1| hypothetical protein
EUTSA_v10007064mg [Eutrema salsugineum]
Length = 630
Score = 183 bits (464), Expect = 2e-44
Identities = 87/127 (68%), Positives = 93/127 (73%)
Frame = +3
Query: 102 MDDGGGLSFDFEGGLDTVPTHPTASVPVIQPPTPNAYNTPVLTXXXXXXXXXXXXXSFVG 281
M+D GLSFDFEGGLD+ P PTASVPV P ++ V S G
Sbjct: 1 MEDADGLSFDFEGGLDSGPAQPTASVPVAPPENSSSAAVNVTPSYDHSSATV----SGAG 56
Query: 282 NRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNED 461
RSFRQTVCRHWLR LCMKGDACGFLHQYDK+RMP+CRFFRLYGECREQDCVYKHTNED
Sbjct: 57 RGRSFRQTVCRHWLRGLCMKGDACGFLHQYDKARMPICRFFRLYGECREQDCVYKHTNED 116
Query: 462 IKECNMY 482
IKECNMY
Sbjct: 117 IKECNMY 123
>ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arabidopsis lyrata subsp.
lyrata] gi|297339460|gb|EFH69877.1| hypothetical protein
ARALYDRAFT_890588 [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 180 bits (457), Expect = 2e-43
Identities = 85/127 (66%), Positives = 92/127 (72%)
Frame = +3
Query: 102 MDDGGGLSFDFEGGLDTVPTHPTASVPVIQPPTPNAYNTPVLTXXXXXXXXXXXXXSFVG 281
M+D GLSFDFEGGLD+ P P+ASVPV P ++ V G
Sbjct: 1 MEDADGLSFDFEGGLDSGPAQPSASVPVAPPDNSSSAAVNVAPTYDHSSATVAG----AG 56
Query: 282 NRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNED 461
RSFRQTVCRHWLR LCMKGDACGFLHQYDK+RMP+CRFFRLYGECREQDCVYKHTNED
Sbjct: 57 RGRSFRQTVCRHWLRGLCMKGDACGFLHQYDKARMPICRFFRLYGECREQDCVYKHTNED 116
Query: 462 IKECNMY 482
IKECNMY
Sbjct: 117 IKECNMY 123
>gb|EPS64393.1| hypothetical protein M569_10389, partial [Genlisea aurea]
Length = 655
Score = 180 bits (456), Expect = 2e-43
Identities = 89/133 (66%), Positives = 92/133 (69%), Gaps = 6/133 (4%)
Frame = +3
Query: 102 MDDGGGLSFDFEGGLDTVPTHPTASVPVIQPPTPNAYNTPVLTXXXXXXXXXXXXXSFV- 278
MDD GGLSFDFEGGLDT P T S+P Q + V +
Sbjct: 1 MDDEGGLSFDFEGGLDTGPGQITGSLPTGQASAADGQGHSVSSASNIYPSTAPASAGQAS 60
Query: 279 -----GNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY 443
G RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY
Sbjct: 61 DGAGGGGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY 120
Query: 444 KHTNEDIKECNMY 482
KHTNEDIKECNMY
Sbjct: 121 KHTNEDIKECNMY 133
>ref|XP_002300333.2| zinc finger family protein [Populus trichocarpa]
gi|550349048|gb|EEE85138.2| zinc finger family protein
[Populus trichocarpa]
Length = 669
Score = 179 bits (453), Expect = 4e-43
Identities = 89/134 (66%), Positives = 92/134 (68%), Gaps = 8/134 (5%)
Frame = +3
Query: 105 DDGGGLSFDFEGGLDTVPTHPTASVPVIQPPT--------PNAYNTPVLTXXXXXXXXXX 260
D G LSFDFEGGLD+ P +P AS+P I PN NT T
Sbjct: 3 DSEGVLSFDFEGGLDSGPANPIASIPAIPSDNYGAATAAAPNTTNTTTNTTNNSNSGAA- 61
Query: 261 XXXSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 440
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV
Sbjct: 62 ---DIQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 118
Query: 441 YKHTNEDIKECNMY 482
YKHTNEDIKECNMY
Sbjct: 119 YKHTNEDIKECNMY 132
>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
gi|223537608|gb|EEF39232.1| conserved hypothetical
protein [Ricinus communis]
Length = 702
Score = 179 bits (453), Expect = 4e-43
Identities = 90/135 (66%), Positives = 95/135 (70%), Gaps = 9/135 (6%)
Frame = +3
Query: 105 DDGGGLSFDFEGGLDTV-PTHPTASVPVIQPPTPNAYNTPVLTXXXXXXXXXXXXXSFVG 281
D GGLSFDFEGGLD+ PT+PTAS+P I P+ N T +
Sbjct: 3 DTDGGLSFDFEGGLDSSGPTNPTASIPAI--PSDNTAAVAAATNNSIVPNVSSNDPASAA 60
Query: 282 --------NRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 437
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC
Sbjct: 61 AAAANNQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 120
Query: 438 VYKHTNEDIKECNMY 482
VYKHTNEDIKECNMY
Sbjct: 121 VYKHTNEDIKECNMY 135
>ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
gi|557551536|gb|ESR62165.1| hypothetical protein
CICLE_v10014454mg [Citrus clementina]
Length = 672
Score = 178 bits (452), Expect = 6e-43
Identities = 89/133 (66%), Positives = 92/133 (69%), Gaps = 7/133 (5%)
Frame = +3
Query: 105 DDGGGLSFDFEGGLDTVPTHPTASVPVIQPPTPNAY-------NTPVLTXXXXXXXXXXX 263
D GGLSFDFEGGLD P PTAS P IQ + A N L+
Sbjct: 3 DSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAALSSSGAAPDHASA 62
Query: 264 XXSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY 443
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVY
Sbjct: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
Query: 444 KHTNEDIKECNMY 482
KHTNEDIKECNMY
Sbjct: 123 KHTNEDIKECNMY 135
>ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
gi|557551535|gb|ESR62164.1| hypothetical protein
CICLE_v10014454mg [Citrus clementina]
Length = 701
Score = 178 bits (452), Expect = 6e-43
Identities = 89/133 (66%), Positives = 92/133 (69%), Gaps = 7/133 (5%)
Frame = +3
Query: 105 DDGGGLSFDFEGGLDTVPTHPTASVPVIQPPTPNAY-------NTPVLTXXXXXXXXXXX 263
D GGLSFDFEGGLD P PTAS P IQ + A N L+
Sbjct: 3 DSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAALSSSGAAPDHASA 62
Query: 264 XXSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY 443
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVY
Sbjct: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
Query: 444 KHTNEDIKECNMY 482
KHTNEDIKECNMY
Sbjct: 123 KHTNEDIKECNMY 135
>gb|EOX96971.1| Cleavage and polyadenylation specificity factor 30 [Theobroma
cacao]
Length = 698
Score = 178 bits (451), Expect = 8e-43
Identities = 91/136 (66%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = +3
Query: 102 MDDG-GGLSFDFEGGLDTVPTHPTASVPVIQPPTPNAYNT--------PVLTXXXXXXXX 254
MDD GGLSFDFEGGLD P PTAS+PV+ A N P
Sbjct: 1 MDDSEGGLSFDFEGGLDAGPAAPTASMPVVNSDPSAAANNNSNNNSAVPGAAPTSTNDPA 60
Query: 255 XXXXXSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQD 434
G RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQD
Sbjct: 61 AAVGGGGAG-RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
Query: 435 CVYKHTNEDIKECNMY 482
CVYKHTNEDIKECNMY
Sbjct: 120 CVYKHTNEDIKECNMY 135
>ref|XP_006306994.1| hypothetical protein CARUB_v10008570mg [Capsella rubella]
gi|482575705|gb|EOA39892.1| hypothetical protein
CARUB_v10008570mg [Capsella rubella]
Length = 631
Score = 177 bits (449), Expect = 1e-42
Identities = 84/127 (66%), Positives = 91/127 (71%)
Frame = +3
Query: 102 MDDGGGLSFDFEGGLDTVPTHPTASVPVIQPPTPNAYNTPVLTXXXXXXXXXXXXXSFVG 281
M+D GLSFDFEGGLD+ P +ASVPV P ++ V G
Sbjct: 1 MEDADGLSFDFEGGLDSGPVQSSASVPVAPPDNSSSAAVNVAPSYDHSAATVAG----AG 56
Query: 282 NRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNED 461
RSFRQTVCRHWLR LCMKGDACGFLHQYDK+RMP+CRFFRLYGECREQDCVYKHTNED
Sbjct: 57 RGRSFRQTVCRHWLRGLCMKGDACGFLHQYDKARMPICRFFRLYGECREQDCVYKHTNED 116
Query: 462 IKECNMY 482
IKECNMY
Sbjct: 117 IKECNMY 123
>ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Citrus sinensis]
Length = 683
Score = 177 bits (448), Expect = 2e-42
Identities = 88/130 (67%), Positives = 92/130 (70%), Gaps = 4/130 (3%)
Frame = +3
Query: 105 DDGGGLSFDFEGGLDTVPTHPTASVPVIQPPT----PNAYNTPVLTXXXXXXXXXXXXXS 272
D GGLSFDFEGGLD P PTAS P P + P+ + PV
Sbjct: 3 DSEGGLSFDFEGGLDAGPGMPTASNPAAAPSSSGAAPDHASAPV---------------P 47
Query: 273 FVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 452
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHT
Sbjct: 48 HHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT 107
Query: 453 NEDIKECNMY 482
NEDIKECNMY
Sbjct: 108 NEDIKECNMY 117
>ref|NP_001077629.1| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana] gi|6634767|gb|AAF19747.1|AC009917_6 Contains
similarity to gb|U96448 cleavage and polyadenylation
specificity factor 30 kDa from Bos taurus [Arabidopsis
thaliana] gi|24415582|gb|AAN41459.1| putative cleavage
and polyadenylation specificity factor 30 kDa subunit
[Arabidopsis thaliana] gi|332193101|gb|AEE31222.1|
cleavage and polyadenylation specificity factor CPSF30
[Arabidopsis thaliana]
Length = 250
Score = 177 bits (448), Expect = 2e-42
Identities = 84/127 (66%), Positives = 91/127 (71%)
Frame = +3
Query: 102 MDDGGGLSFDFEGGLDTVPTHPTASVPVIQPPTPNAYNTPVLTXXXXXXXXXXXXXSFVG 281
M+D GLSFDFEGGLD+ P TASVPV P ++ V G
Sbjct: 1 MEDADGLSFDFEGGLDSGPVQNTASVPVAPPENSSSAAVNVAPTYDHSSATVAG----AG 56
Query: 282 NRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNED 461
RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMP+CRFFRLYGECREQDCVYKHTNED
Sbjct: 57 RGRSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQDCVYKHTNED 116
Query: 462 IKECNMY 482
IKECNMY
Sbjct: 117 IKECNMY 123
>ref|NP_174334.2| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana] gi|229553918|sp|A9LNK9.1|CPSF_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
CPSF30; AltName: Full=Zinc finger CCCH domain-containing
protein 11; Short=AtC3H11 gi|160338218|gb|ABX26048.1|
cleavage and polyadenylation specificity factor-YT521B
[Arabidopsis thaliana] gi|332193100|gb|AEE31221.1|
cleavage and polyadenylation specificity factor CPSF30
[Arabidopsis thaliana]
Length = 631
Score = 177 bits (448), Expect = 2e-42
Identities = 84/127 (66%), Positives = 91/127 (71%)
Frame = +3
Query: 102 MDDGGGLSFDFEGGLDTVPTHPTASVPVIQPPTPNAYNTPVLTXXXXXXXXXXXXXSFVG 281
M+D GLSFDFEGGLD+ P TASVPV P ++ V G
Sbjct: 1 MEDADGLSFDFEGGLDSGPVQNTASVPVAPPENSSSAAVNVAPTYDHSSATVAG----AG 56
Query: 282 NRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNED 461
RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMP+CRFFRLYGECREQDCVYKHTNED
Sbjct: 57 RGRSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQDCVYKHTNED 116
Query: 462 IKECNMY 482
IKECNMY
Sbjct: 117 IKECNMY 123
>ref|XP_006377637.1| hypothetical protein POPTR_0011s09220g [Populus trichocarpa]
gi|550327986|gb|ERP55434.1| hypothetical protein
POPTR_0011s09220g [Populus trichocarpa]
Length = 278
Score = 175 bits (444), Expect = 5e-42
Identities = 88/135 (65%), Positives = 94/135 (69%), Gaps = 9/135 (6%)
Frame = +3
Query: 105 DDGGGLSFDFEGGLDTVPTHPTASVPVI--------QPPTPNAYNTPVLTXXXXXXXXXX 260
D G LSFDFEGGLD+ PT+P+AS+ I PN T T
Sbjct: 3 DPEGVLSFDFEGGLDSGPTNPSASMAAIPSDNQGSAMAAAPNTATTGASTSNTTTNNSSD 62
Query: 261 XXXSFV-GNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 437
+ + RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC
Sbjct: 63 SGAADMQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 122
Query: 438 VYKHTNEDIKECNMY 482
VYKHTNEDIKECNMY
Sbjct: 123 VYKHTNEDIKECNMY 137
>ref|XP_006846022.1| hypothetical protein AMTR_s00155p00079840 [Amborella trichopoda]
gi|548848778|gb|ERN07697.1| hypothetical protein
AMTR_s00155p00079840 [Amborella trichopoda]
Length = 701
Score = 172 bits (437), Expect = 3e-41
Identities = 84/123 (68%), Positives = 91/123 (73%)
Frame = +3
Query: 114 GGLSFDFEGGLDTVPTHPTASVPVIQPPTPNAYNTPVLTXXXXXXXXXXXXXSFVGNRRS 293
GGLSFDFEGGL+T ++ +IQ N N P+ + + G RRS
Sbjct: 6 GGLSFDFEGGLETTNNPNPTAISLIQ----NDPNAPISSNSVAGNLPDPAAMNLQG-RRS 60
Query: 294 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIKEC 473
FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIKEC
Sbjct: 61 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIKEC 120
Query: 474 NMY 482
NMY
Sbjct: 121 NMY 123