BLASTX nr result

ID: Atropa21_contig00020340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00020340
         (1534 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349360.1| PREDICTED: E3 ubiquitin-protein ligase RNF17...    63   4e-07
ref|XP_004230478.1| PREDICTED: E3 ubiquitin-protein ligase RNF17...    63   4e-07
ref|XP_004230477.1| PREDICTED: E3 ubiquitin-protein ligase RNF17...    63   4e-07

>ref|XP_006349360.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Solanum
            tuberosum]
          Length = 226

 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
 Frame = +3

Query: 1059 EYSF--AGRMGIWRLLDISAMAMVVIFYFAGLFHRWALRRHVRLLTVLQAH 1205
            E+ F   G +GIWRL DI A+A V IFY  GL+HRW LRR VR L VL  H
Sbjct: 174  EFQFIPTGGLGIWRLFDICAIATVAIFYLVGLYHRWVLRRRVRQLAVLPIH 224


>ref|XP_004230478.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform 2 [Solanum
            lycopersicum]
          Length = 208

 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
 Frame = +3

Query: 1059 EYSF--AGRMGIWRLLDISAMAMVVIFYFAGLFHRWALRRHVRLLTVLQAH 1205
            E+ F   G +GIWRL DI A+A V IFY  GL+HRW LRR VR L VL  H
Sbjct: 156  EFQFIPTGGLGIWRLFDICAIATVAIFYIVGLYHRWVLRRRVRQLAVLPIH 206


>ref|XP_004230477.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform 1 [Solanum
            lycopersicum]
          Length = 227

 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
 Frame = +3

Query: 1059 EYSF--AGRMGIWRLLDISAMAMVVIFYFAGLFHRWALRRHVRLLTVLQAH 1205
            E+ F   G +GIWRL DI A+A V IFY  GL+HRW LRR VR L VL  H
Sbjct: 175  EFQFIPTGGLGIWRLFDICAIATVAIFYIVGLYHRWVLRRRVRQLAVLPIH 225


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