BLASTX nr result
ID: Atropa21_contig00020340
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00020340 (1534 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006349360.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 63 4e-07 ref|XP_004230478.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 63 4e-07 ref|XP_004230477.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 63 4e-07 >ref|XP_006349360.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Solanum tuberosum] Length = 226 Score = 62.8 bits (151), Expect = 4e-07 Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 2/51 (3%) Frame = +3 Query: 1059 EYSF--AGRMGIWRLLDISAMAMVVIFYFAGLFHRWALRRHVRLLTVLQAH 1205 E+ F G +GIWRL DI A+A V IFY GL+HRW LRR VR L VL H Sbjct: 174 EFQFIPTGGLGIWRLFDICAIATVAIFYLVGLYHRWVLRRRVRQLAVLPIH 224 >ref|XP_004230478.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform 2 [Solanum lycopersicum] Length = 208 Score = 62.8 bits (151), Expect = 4e-07 Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 2/51 (3%) Frame = +3 Query: 1059 EYSF--AGRMGIWRLLDISAMAMVVIFYFAGLFHRWALRRHVRLLTVLQAH 1205 E+ F G +GIWRL DI A+A V IFY GL+HRW LRR VR L VL H Sbjct: 156 EFQFIPTGGLGIWRLFDICAIATVAIFYIVGLYHRWVLRRRVRQLAVLPIH 206 >ref|XP_004230477.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform 1 [Solanum lycopersicum] Length = 227 Score = 62.8 bits (151), Expect = 4e-07 Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 2/51 (3%) Frame = +3 Query: 1059 EYSF--AGRMGIWRLLDISAMAMVVIFYFAGLFHRWALRRHVRLLTVLQAH 1205 E+ F G +GIWRL DI A+A V IFY GL+HRW LRR VR L VL H Sbjct: 175 EFQFIPTGGLGIWRLFDICAIATVAIFYIVGLYHRWVLRRRVRQLAVLPIH 225