BLASTX nr result

ID: Atropa21_contig00020272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00020272
         (682 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEH25587.1| transposase [Solanum demissum]                          78   2e-12
ref|XP_006354277.1| PREDICTED: uncharacterized protein LOC102592...    74   4e-12
ref|XP_006350732.1| PREDICTED: uncharacterized protein LOC102582...    76   8e-12

>gb|AEH25587.1| transposase [Solanum demissum]
          Length = 1124

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
 Frame = +3

Query: 234  STPSSVA---ANRGKGKGVARATPYKRSIVMEISVFHDENGATTLNPGLSSQAIVSTGLR 404
            STP+      +N+G+G+G    T YKR  V+ + VF DENG   LNPG+SS  I STG  
Sbjct: 1014 STPADYQLTNSNKGRGRGRGSTTSYKRQTVIGMGVFQDENGFKALNPGMSSCKIFSTGTT 1073

Query: 405  KIIRSADVTSDIDFKPTNG--LKW 470
            K+ +SADVT DI +KP+    LKW
Sbjct: 1074 KVTKSADVTGDIGYKPSTAPKLKW 1097


>ref|XP_006354277.1| PREDICTED: uncharacterized protein LOC102592702 [Solanum tuberosum]
          Length = 575

 Score = 74.3 bits (181), Expect(2) = 4e-12
 Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
 Frame = +3

Query: 234 STPSSVA---ANRGKGKGVARATPYKRSIVMEISVFHDENGATTLNPGLSSQAIVSTGLR 404
           STP+      +N+G+G+G    T YKR  V+ + VF DENG   LNPG+SS  I STG  
Sbjct: 465 STPADYQLTNSNKGRGRGRGSTTSYKRQAVIGMGVFQDENGFKALNPGMSSCKIFSTGTT 524

Query: 405 KIIRSADVTSDIDFKPTNG--LKW 470
           K+ +SADVT DI +K +    LKW
Sbjct: 525 KVTKSADVTGDIGYKLSTAPKLKW 548



 Score = 23.1 bits (48), Expect(2) = 4e-12
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +2

Query: 482 AITTRRLQEIRDQAKANDSNNAN 550
           AI+TR+LQE+R++ +     +++
Sbjct: 553 AISTRKLQEMREEQRKKSKGSSS 575


>ref|XP_006350732.1| PREDICTED: uncharacterized protein LOC102582528 [Solanum tuberosum]
          Length = 1068

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
 Frame = +3

Query: 234  STPSSVA---ANRGKGKGVARATPYKRSIVMEISVFHDENGATTLNPGLSSQAIVSTGLR 404
            STP+      +N+G+G+G    T YKR  V+ + VF DENG   LNPG+SS  I STG  
Sbjct: 988  STPADYQLTNSNKGRGRGRGSTTSYKRQAVIGMGVFQDENGFKALNPGMSSCKIFSTGTT 1047

Query: 405  KIIRSADVTSDIDFKPTNGLK 467
            K+ +SADVT DI +KP+   K
Sbjct: 1048 KVTKSADVTDDIGYKPSTAPK 1068


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