BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00020166
         (486 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350862.1| PREDICTED: transcription initiation factor T...   134   1e-29
ref|XP_006350861.1| PREDICTED: transcription initiation factor T...   134   1e-29
gb|EXC45494.1| RNA-binding protein EWS [Morus notabilis]               83   3e-14
ref|XP_003518322.1| PREDICTED: transcription initiation factor T...    75   9e-12
ref|XP_006379127.1| hypothetical protein POPTR_0009s08040g [Popu...    74   3e-11
ref|XP_006369676.1| hypothetical protein POPTR_0001s288101g, par...    73   4e-11
ref|XP_002298497.1| predicted protein [Populus trichocarpa]            72   6e-11
ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261...    72   1e-10
ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medica...    71   2e-10
gb|EOY34590.1| TBP-associated factor 15B isoform 2 [Theobroma ca...    70   2e-10
gb|EOY34589.1| TBP-associated factor 15B isoform 1 [Theobroma ca...    70   2e-10
ref|XP_004294778.1| PREDICTED: uncharacterized protein LOC101310...    70   3e-10
dbj|BAJ91718.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   7e-09
ref|XP_004500309.1| PREDICTED: glycine-rich cell wall structural...    65   9e-09
ref|XP_006425144.1| hypothetical protein CICLE_v10027796mg [Citr...    64   3e-08
gb|EMT03254.1| RNA-binding protein EWS [Aegilops tauschii]             63   5e-08
gb|AFW80099.1| hypothetical protein ZEAMMB73_349753 [Zea mays] g...    63   5e-08
ref|XP_004968287.1| PREDICTED: loricrin-like isoform X1 [Setaria...    62   8e-08
ref|XP_002521188.1| RNA binding protein, putative [Ricinus commu...    62   1e-07
gb|ESW18818.1| hypothetical protein PHAVU_006G072900g [Phaseolus...    60   4e-07

>ref|XP_006350862.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
           isoform X2 [Solanum tuberosum]
           gi|565368460|ref|XP_006350863.1| PREDICTED:
           transcription initiation factor TFIID subunit 15b-like
           isoform X3 [Solanum tuberosum]
          Length = 450

 Score =  134 bits (338), Expect = 1e-29
 Identities = 64/86 (74%), Positives = 65/86 (75%)
 Frame = -2

Query: 368 SRNAGGGRTGSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGNPNAVPPPTS 189
           SRNAGGGRTGSYG SQGRDGGGYAQGPPHAPPSYGAADSNYPPPSN YGGNP+AVPPP S
Sbjct: 174 SRNAGGGRTGSYGGSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNTYGGNPDAVPPPAS 233

Query: 188 YVXXXXXXXXXXXXXXXXXGDTPADA 111
           YV                 GD PADA
Sbjct: 234 YVGGPASYPPSYGAPGGYGGDAPADA 259


>ref|XP_006350861.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
           isoform X1 [Solanum tuberosum]
          Length = 461

 Score =  134 bits (338), Expect = 1e-29
 Identities = 64/86 (74%), Positives = 65/86 (75%)
 Frame = -2

Query: 368 SRNAGGGRTGSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGNPNAVPPPTS 189
           SRNAGGGRTGSYG SQGRDGGGYAQGPPHAPPSYGAADSNYPPPSN YGGNP+AVPPP S
Sbjct: 185 SRNAGGGRTGSYGGSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNTYGGNPDAVPPPAS 244

Query: 188 YVXXXXXXXXXXXXXXXXXGDTPADA 111
           YV                 GD PADA
Sbjct: 245 YVGGPASYPPSYGAPGGYGGDAPADA 270


>gb|EXC45494.1| RNA-binding protein EWS [Morus notabilis]
          Length = 588

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 41/63 (65%), Positives = 44/63 (69%), Gaps = 5/63 (7%)
 Frame = -2

Query: 359 AGGGRTGSYGVSQGRDGGGYAQG-PPHAPPSYGAADSNYPPPSNAYGGNPN----AVPPP 195
           +GG R GSYG +QGRD GGY Q  PP APPSYG    NYPP  N+YGGN N    AVPPP
Sbjct: 185 SGGNRGGSYGGNQGRDEGGYGQVLPPAAPPSYGGTGGNYPPSHNSYGGNANYGTEAVPPP 244

Query: 194 TSY 186
           TSY
Sbjct: 245 TSY 247


>ref|XP_003518322.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
           isoform X1 [Glycine max]
          Length = 404

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 37/65 (56%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
 Frame = -2

Query: 368 SRNAGGGRTGSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGNPN----AVP 201
           SR+ GG R GS+  SQG D GGY Q PP A  SYG A  NYPP   +YGGN N     VP
Sbjct: 126 SRSGGGNRGGSFSGSQGFDDGGYGQVPPPAAQSYGGAGGNYPPAYGSYGGNSNYETDVVP 185

Query: 200 PPTSY 186
           PP SY
Sbjct: 186 PPASY 190


>ref|XP_006379127.1| hypothetical protein POPTR_0009s08040g [Populus trichocarpa]
           gi|550331275|gb|ERP56924.1| hypothetical protein
           POPTR_0009s08040g [Populus trichocarpa]
          Length = 443

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/61 (57%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
 Frame = -2

Query: 356 GGGRTGSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGNPN----AVPPPTS 189
           GG R GSYG +QGR   GY Q PP + PSYG    NYPP  N+Y  N N    AVPPPTS
Sbjct: 171 GGNRGGSYGGNQGRGDSGYNQAPPPSLPSYGGGGGNYPPAPNSYSANANYGMEAVPPPTS 230

Query: 188 Y 186
           Y
Sbjct: 231 Y 231


>ref|XP_006369676.1| hypothetical protein POPTR_0001s288101g, partial [Populus
           trichocarpa] gi|550348413|gb|ERP66245.1| hypothetical
           protein POPTR_0001s288101g, partial [Populus
           trichocarpa]
          Length = 275

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 34/56 (60%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
 Frame = -2

Query: 341 GSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGNPN----AVPPPTSY 186
           GSY  +QGRD  GY Q PP + PSYG    NYPP  N+YGGN N    AVPPPTSY
Sbjct: 1   GSYSGNQGRDDSGYNQAPPPSLPSYGGGGGNYPPAPNSYGGNANYGMEAVPPPTSY 56


>ref|XP_002298497.1| predicted protein [Populus trichocarpa]
          Length = 399

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 36/60 (60%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
 Frame = -2

Query: 353 GGRTGSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGNPN----AVPPPTSY 186
           GGR G  G +QGRD  GY Q PP + PSYG    NYPP  N+YGGN N    AVPPPTSY
Sbjct: 122 GGRGGDSG-NQGRDDSGYNQAPPPSLPSYGGGGGNYPPAPNSYGGNANYGMEAVPPPTSY 180


>ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera]
          Length = 462

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 36/64 (56%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
 Frame = -2

Query: 356 GGGRTGSYGVSQGRDGGG---YAQGPPHAPPSYGAADSNYPPPSNAYGGNPN----AVPP 198
           GG R GSYG +Q R GGG   + Q PP AP SYG   + Y PP N++GGN N    AVPP
Sbjct: 173 GGSRGGSYGGNQARGGGGDGGFGQVPPAAPQSYGGGSAGYYPPPNSFGGNTNYGGEAVPP 232

Query: 197 PTSY 186
           PTSY
Sbjct: 233 PTSY 236


>ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medicago truncatula]
           gi|355488380|gb|AES69583.1| HIV Tat-specific factor-like
           protein [Medicago truncatula]
          Length = 473

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/65 (58%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
 Frame = -2

Query: 365 RNAGGGRTGSYGVSQGRDGGGYAQGPP-HAPPSYGAADSNYPPPSNAYGGNPN----AVP 201
           R+ G  R GSYG +QGR+ GGY Q PP  A  SYG A  NYPP    YGGN N    AVP
Sbjct: 208 RSGGSNRGGSYGGNQGREDGGYGQAPPVAAAQSYGGAGGNYPP---TYGGNANYGTDAVP 264

Query: 200 PPTSY 186
           PPTSY
Sbjct: 265 PPTSY 269


>gb|EOY34590.1| TBP-associated factor 15B isoform 2 [Theobroma cacao]
          Length = 369

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/63 (60%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
 Frame = -2

Query: 359 AGGGRTGSYGVSQGRDGGGYAQGPPHAPPSY-GAADSNYPPPSNAYGGNPN----AVPPP 195
           +GG R GSYG +QG + G Y Q PP A  SY GAA  NYPP  NAY GN N    AVPPP
Sbjct: 190 SGGTRGGSYGGNQGGEDGAYGQVPPPASHSYGGAAGGNYPPAPNAYVGNANYGMDAVPPP 249

Query: 194 TSY 186
           TSY
Sbjct: 250 TSY 252


>gb|EOY34589.1| TBP-associated factor 15B isoform 1 [Theobroma cacao]
          Length = 468

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/63 (60%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
 Frame = -2

Query: 359 AGGGRTGSYGVSQGRDGGGYAQGPPHAPPSY-GAADSNYPPPSNAYGGNPN----AVPPP 195
           +GG R GSYG +QG + G Y Q PP A  SY GAA  NYPP  NAY GN N    AVPPP
Sbjct: 190 SGGTRGGSYGGNQGGEDGAYGQVPPPASHSYGGAAGGNYPPAPNAYVGNANYGMDAVPPP 249

Query: 194 TSY 186
           TSY
Sbjct: 250 TSY 252


>ref|XP_004294778.1| PREDICTED: uncharacterized protein LOC101310877 [Fragaria vesca
           subsp. vesca]
          Length = 453

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/61 (60%), Positives = 41/61 (67%)
 Frame = -2

Query: 368 SRNAGGGRTGSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGNPNAVPPPTS 189
           SR  GG R GSYG SQGR+ GGY Q P  APPSYGA  S  P  + +YG   +AVPPPTS
Sbjct: 187 SRGGGGSRGGSYGGSQGREDGGYGQAPA-APPSYGAGGSYQPSYNASYG--TDAVPPPTS 243

Query: 188 Y 186
           Y
Sbjct: 244 Y 244


>dbj|BAJ91718.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 483

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = -2

Query: 365 RNAGGGRTGSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGN-----PNAVP 201
           R   GG  G  G    +  GGY Q PP  PPSYG    +Y PP ++YGGN      +AVP
Sbjct: 192 RGGSGGSYGGRGQENNQGDGGYGQAPPKGPPSYGGPPGDYAPPPSSYGGNNVYSSESAVP 251

Query: 200 PPTSY 186
           PP SY
Sbjct: 252 PPNSY 256


>ref|XP_004500309.1| PREDICTED: glycine-rich cell wall structural protein 1.8-like
           isoform X1 [Cicer arietinum]
          Length = 495

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 35/65 (53%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
 Frame = -2

Query: 365 RNAGGGRTGSYGVSQGRDGGGYAQGPPHAPPSY-GAADSNYPPPSNAYGGNPN----AVP 201
           R+ G  R GSYG +QGR+ GGY Q PP A   Y G    NYPP    YG N N    AVP
Sbjct: 222 RSGGSSRGGSYGGNQGREDGGYGQAPPPAAQPYGGGGGGNYPP---TYGANANYGTDAVP 278

Query: 200 PPTSY 186
           PPTSY
Sbjct: 279 PPTSY 283


>ref|XP_006425144.1| hypothetical protein CICLE_v10027796mg [Citrus clementina]
           gi|557527078|gb|ESR38384.1| hypothetical protein
           CICLE_v10027796mg [Citrus clementina]
          Length = 863

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/64 (54%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
 Frame = -2

Query: 365 RNAGGGRTGSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGNPN----AVPP 198
           R+ GG R  SYG SQGR+   Y   PP    SY  A  NYPP +N+YGGN N    AVPP
Sbjct: 642 RSGGGNRGSSYGGSQGREDTSYGHVPPS---SYPGASGNYPP-ANSYGGNTNYEMDAVPP 697

Query: 197 PTSY 186
           PTSY
Sbjct: 698 PTSY 701


>gb|EMT03254.1| RNA-binding protein EWS [Aegilops tauschii]
          Length = 495

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/65 (44%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
 Frame = -2

Query: 365 RNAGGGRTGSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGN-----PNAVP 201
           R   G   G  G    +  GGY Q PP  PPSYG    +Y PP ++YGGN      +AVP
Sbjct: 185 RGGSGAGYGGRGQENNQGDGGYGQAPPKGPPSYGGPPGDYAPPPSSYGGNNVYSSDSAVP 244

Query: 200 PPTSY 186
           PP SY
Sbjct: 245 PPNSY 249


>gb|AFW80099.1| hypothetical protein ZEAMMB73_349753 [Zea mays]
           gi|413947451|gb|AFW80100.1| hypothetical protein
           ZEAMMB73_349753 [Zea mays]
          Length = 489

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 14/70 (20%)
 Frame = -2

Query: 353 GGRTGSYGVSQ---------GRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGN----- 216
           GGR GSYG            G   GGY Q PP APPSYG    +Y  P ++YGGN     
Sbjct: 192 GGRGGSYGGRDQENQRGSEGGYSAGGYGQAPPQAPPSYGGPAGDYAAPPSSYGGNNAYGS 251

Query: 215 PNAVPPPTSY 186
            +AVPPP SY
Sbjct: 252 DSAVPPPNSY 261


>ref|XP_004968287.1| PREDICTED: loricrin-like isoform X1 [Setaria italica]
           gi|514775671|ref|XP_004968288.1| PREDICTED:
           loricrin-like isoform X2 [Setaria italica]
           gi|514775675|ref|XP_004968289.1| PREDICTED:
           loricrin-like isoform X3 [Setaria italica]
          Length = 486

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/68 (50%), Positives = 38/68 (55%), Gaps = 12/68 (17%)
 Frame = -2

Query: 353 GGRTGSYGVSQGRDG-------GGYAQGPPHAPPSYGAADSNYPPPSNAYGGN-----PN 210
           GGR GSYG   GRD        GGY Q PP  PPSYG    +Y  P ++YGGN      +
Sbjct: 191 GGRGGSYG---GRDQENQRGSEGGYGQAPPQGPPSYGGPAGDYVAPPSSYGGNNAYGSDS 247

Query: 209 AVPPPTSY 186
           AVPPP SY
Sbjct: 248 AVPPPNSY 255


>ref|XP_002521188.1| RNA binding protein, putative [Ricinus communis]
           gi|223539602|gb|EEF41188.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 437

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/51 (54%), Positives = 35/51 (68%)
 Frame = -2

Query: 368 SRNAGGGRTGSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGN 216
           +R+ GG R  SYG     +GGGY+Q PP A PSYG +  NYPPP ++YGGN
Sbjct: 174 NRSGGGNRGSSYGRD---NGGGYSQVPPSAVPSYGGSGVNYPPPPSSYGGN 221


>gb|ESW18818.1| hypothetical protein PHAVU_006G072900g [Phaseolus vulgaris]
          Length = 517

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = -2

Query: 350 GRTGSYGVSQGRDGGGYAQGPPHAPPSYGAADSNYPPPSNAYGGN----PNAVPPPTSY 186
           GR GSY  +QGR+ G Y Q P     SYG+A  + PP  N+YGGN     +AVPPP SY
Sbjct: 245 GRGGSYRGNQGREDGSYGQVPAPNAQSYGSAGGSLPPTYNSYGGNASYGTDAVPPPASY 303