BLASTX nr result

ID: Atropa21_contig00020110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00020110
         (2190 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum] gi...   119   5e-24
ref|XP_006350998.1| PREDICTED: F-box protein SKIP5-like [Solanum...   118   1e-23
ref|XP_006292685.1| hypothetical protein CARUB_v10018930mg [Caps...   108   1e-20
ref|XP_006403571.1| hypothetical protein EUTSA_v10010628mg [Eutr...   105   1e-19
gb|EPS72918.1| hypothetical protein M569_01839, partial [Genlise...   105   1e-19
gb|EOY19921.1| SKP1/ASK-interacting protein 5 isoform 1 [Theobro...   103   2e-19
ref|NP_566999.1| SKP1/ASK-interacting protein 5 [Arabidopsis tha...   103   2e-19
ref|XP_002513076.1| conserved hypothetical protein [Ricinus comm...   103   2e-19
gb|AAG21980.1| SKP1 interacting partner 5 [Arabidopsis thaliana]      103   2e-19
ref|XP_004307124.1| PREDICTED: F-box protein SKIP5-like isoform ...   103   3e-19
ref|XP_004307123.1| PREDICTED: F-box protein SKIP5-like isoform ...   103   3e-19
ref|XP_006590332.1| PREDICTED: uncharacterized protein LOC100808...   103   4e-19
ref|NP_001242768.1| uncharacterized protein LOC100808414 [Glycin...   103   4e-19
ref|XP_002877981.1| skp1-interacting partner 5 [Arabidopsis lyra...   102   5e-19
gb|EXB62650.1| hypothetical protein L484_023946 [Morus notabilis]     102   7e-19
gb|EMJ20028.1| hypothetical protein PRUPE_ppa010167mg [Prunus pe...   101   1e-18
gb|ESW20963.1| hypothetical protein PHAVU_005G029600g, partial [...   101   2e-18
ref|XP_006420750.1| hypothetical protein CICLE_v10005678mg [Citr...   100   2e-18
ref|XP_002461155.1| hypothetical protein SORBIDRAFT_02g041860 [S...   100   2e-18
ref|XP_003559852.1| PREDICTED: F-box protein SKIP5-like [Brachyp...   100   3e-18

>ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum]
           gi|15777895|gb|AAL05932.1| SKIP5-like protein [Solanum
           lycopersicum]
          Length = 265

 Score =  119 bits (298), Expect = 5e-24
 Identities = 57/66 (86%), Positives = 60/66 (90%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           +CS   +SALE MSTCKL NLTVRTELGCCLLHRSGKLT+D CILQCESNPLDHLSYAII
Sbjct: 128 ICSRGSDSALEFMSTCKLANLTVRTELGCCLLHRSGKLTVDGCILQCESNPLDHLSYAII 187

Query: 187 STAGAA 170
           STAGAA
Sbjct: 188 STAGAA 193


>ref|XP_006350998.1| PREDICTED: F-box protein SKIP5-like [Solanum tuberosum]
          Length = 265

 Score =  118 bits (295), Expect = 1e-23
 Identities = 57/66 (86%), Positives = 59/66 (89%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           +CS   +SALE MSTCKL NLTVRTELGCCLLHR GKLTID CILQCESNPLDHLSYAII
Sbjct: 128 ICSRSSDSALEFMSTCKLANLTVRTELGCCLLHRRGKLTIDGCILQCESNPLDHLSYAII 187

Query: 187 STAGAA 170
           STAGAA
Sbjct: 188 STAGAA 193


>ref|XP_006292685.1| hypothetical protein CARUB_v10018930mg [Capsella rubella]
           gi|482561392|gb|EOA25583.1| hypothetical protein
           CARUB_v10018930mg [Capsella rubella]
          Length = 271

 Score =  108 bits (269), Expect = 1e-20
 Identities = 48/64 (75%), Positives = 57/64 (89%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           +CS   +SALE++STCKL NLTV+ ELGCCLLHRSG+LTID C+LQCE+NPLDHLSY I+
Sbjct: 142 ICSRGSDSALELLSTCKLANLTVKAELGCCLLHRSGRLTIDGCVLQCETNPLDHLSYPIV 201

Query: 187 STAG 176
           STAG
Sbjct: 202 STAG 205


>ref|XP_006403571.1| hypothetical protein EUTSA_v10010628mg [Eutrema salsugineum]
           gi|557104690|gb|ESQ45024.1| hypothetical protein
           EUTSA_v10010628mg [Eutrema salsugineum]
          Length = 272

 Score =  105 bits (261), Expect = 1e-19
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           VCS   +SALE++STCKL NLTV+ ELGCCLLHRSG+LTID C+LQCE+NPLDHLS  I+
Sbjct: 142 VCSRGSDSALELLSTCKLANLTVKAELGCCLLHRSGRLTIDGCVLQCETNPLDHLSCPIV 201

Query: 187 STAG 176
           STAG
Sbjct: 202 STAG 205


>gb|EPS72918.1| hypothetical protein M569_01839, partial [Genlisea aurea]
          Length = 246

 Score =  105 bits (261), Expect = 1e-19
 Identities = 50/69 (72%), Positives = 57/69 (82%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           VCS    SALE MSTCKL NLTV  ELGCCLLHRSG+LT+D C+LQCESNPLDHLS+AI+
Sbjct: 119 VCSNGSESALEFMSTCKLANLTVIAELGCCLLHRSGRLTVDGCVLQCESNPLDHLSHAIV 178

Query: 187 STAGAAV*T 161
           +TA A + T
Sbjct: 179 TTATANIST 187


>gb|EOY19921.1| SKP1/ASK-interacting protein 5 isoform 1 [Theobroma cacao]
          Length = 263

 Score =  103 bits (258), Expect = 2e-19
 Identities = 49/67 (73%), Positives = 57/67 (85%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           +C    +SALE +STCKLTNLTV+ ELGCCLLHRSG+L IDECILQCESNPLD+LS  I+
Sbjct: 141 LCLRGSDSALEFLSTCKLTNLTVKAELGCCLLHRSGRLIIDECILQCESNPLDYLSCPIV 200

Query: 187 STAGAAV 167
           STAG+ V
Sbjct: 201 STAGSEV 207


>ref|NP_566999.1| SKP1/ASK-interacting protein 5 [Arabidopsis thaliana]
           gi|75250089|sp|Q94FT2.1|SKIP5_ARATH RecName: Full=F-box
           protein SKIP5; AltName: Full=SKP1-interacting partner 5
           gi|14348816|gb|AAK61345.1|AF347972_1 SKP1-interacting
           partner 5 [Arabidopsis thaliana]
           gi|21537258|gb|AAM61599.1| SKP1 interacting partner
           SKIP5 [Arabidopsis thaliana] gi|29028838|gb|AAO64798.1|
           At3g54480 [Arabidopsis thaliana]
           gi|110743130|dbj|BAE99457.1| SKP1-interacting partner 5
           [Arabidopsis thaliana] gi|332645715|gb|AEE79236.1|
           SKP1/ASK-interacting protein 5 [Arabidopsis thaliana]
          Length = 274

 Score =  103 bits (258), Expect = 2e-19
 Identities = 47/64 (73%), Positives = 56/64 (87%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           VC+   +SALE++STCKL NLTV+ ELGCCLLHRSG+LTID C+LQCE+NPLDHLS  I+
Sbjct: 142 VCARGSDSALELLSTCKLANLTVKAELGCCLLHRSGRLTIDGCVLQCETNPLDHLSCPIV 201

Query: 187 STAG 176
           STAG
Sbjct: 202 STAG 205


>ref|XP_002513076.1| conserved hypothetical protein [Ricinus communis]
           gi|223548087|gb|EEF49579.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  103 bits (258), Expect = 2e-19
 Identities = 53/87 (60%), Positives = 62/87 (71%)
 Frame = -3

Query: 406 LIVGTVFTCHCMHVCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQC 227
           LI G       M +CS   +SALE +STCKL NLTV+ ELGCCLLHRSGKLTID C+LQC
Sbjct: 115 LIGGGELPDETMLLCSRGSDSALEFLSTCKLANLTVKAELGCCLLHRSGKLTIDSCVLQC 174

Query: 226 ESNPLDHLSYAIISTAGAAV*TAGPNK 146
           ES+PLD+LS  I+STAG     + P K
Sbjct: 175 ESDPLDYLSCPIVSTAGKHEVLSAPMK 201


>gb|AAG21980.1| SKP1 interacting partner 5 [Arabidopsis thaliana]
          Length = 252

 Score =  103 bits (258), Expect = 2e-19
 Identities = 47/64 (73%), Positives = 56/64 (87%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           VC+   +SALE++STCKL NLTV+ ELGCCLLHRSG+LTID C+LQCE+NPLDHLS  I+
Sbjct: 120 VCARGSDSALELLSTCKLANLTVKAELGCCLLHRSGRLTIDGCVLQCETNPLDHLSCPIV 179

Query: 187 STAG 176
           STAG
Sbjct: 180 STAG 183


>ref|XP_004307124.1| PREDICTED: F-box protein SKIP5-like isoform 2 [Fragaria vesca
           subsp. vesca]
          Length = 246

 Score =  103 bits (257), Expect = 3e-19
 Identities = 48/65 (73%), Positives = 55/65 (84%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           +CS   +SALE +STCKL NLTV+TELGCCLLHRSG+LTID C+LQCESNPLD LS  I+
Sbjct: 124 ICSRGADSALEFLSTCKLANLTVKTELGCCLLHRSGRLTIDGCVLQCESNPLDFLSVPIV 183

Query: 187 STAGA 173
           STA A
Sbjct: 184 STASA 188


>ref|XP_004307123.1| PREDICTED: F-box protein SKIP5-like isoform 1 [Fragaria vesca
           subsp. vesca]
          Length = 261

 Score =  103 bits (257), Expect = 3e-19
 Identities = 48/65 (73%), Positives = 55/65 (84%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           +CS   +SALE +STCKL NLTV+TELGCCLLHRSG+LTID C+LQCESNPLD LS  I+
Sbjct: 139 ICSRGADSALEFLSTCKLANLTVKTELGCCLLHRSGRLTIDGCVLQCESNPLDFLSVPIV 198

Query: 187 STAGA 173
           STA A
Sbjct: 199 STASA 203


>ref|XP_006590332.1| PREDICTED: uncharacterized protein LOC100808414 isoform X1 [Glycine
           max]
          Length = 266

 Score =  103 bits (256), Expect = 4e-19
 Identities = 49/67 (73%), Positives = 56/67 (83%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           VCS   +SALE +STCKL NLTVR ELGCCLLHR G+LTID CILQCESNPLD+LS  I+
Sbjct: 133 VCSRGSDSALEFLSTCKLANLTVRAELGCCLLHRKGRLTIDGCILQCESNPLDYLSCPIV 192

Query: 187 STAGAAV 167
           STA ++V
Sbjct: 193 STASSSV 199


>ref|NP_001242768.1| uncharacterized protein LOC100808414 [Glycine max]
           gi|255647505|gb|ACU24216.1| unknown [Glycine max]
          Length = 227

 Score =  103 bits (256), Expect = 4e-19
 Identities = 49/67 (73%), Positives = 56/67 (83%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           VCS   +SALE +STCKL NLTVR ELGCCLLHR G+LTID CILQCESNPLD+LS  I+
Sbjct: 133 VCSRGSDSALEFLSTCKLANLTVRAELGCCLLHRKGRLTIDGCILQCESNPLDYLSCPIV 192

Query: 187 STAGAAV 167
           STA ++V
Sbjct: 193 STASSSV 199


>ref|XP_002877981.1| skp1-interacting partner 5 [Arabidopsis lyrata subsp. lyrata]
           gi|297323819|gb|EFH54240.1| skp1-interacting partner 5
           [Arabidopsis lyrata subsp. lyrata]
          Length = 274

 Score =  102 bits (255), Expect = 5e-19
 Identities = 46/64 (71%), Positives = 56/64 (87%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           VC+   +SALE++STCKL NLTV+ ELGCCLLHRSG++TID C+LQCE+NPLDHLS  I+
Sbjct: 142 VCARGSDSALELLSTCKLANLTVKAELGCCLLHRSGRVTIDGCVLQCETNPLDHLSCPIV 201

Query: 187 STAG 176
           STAG
Sbjct: 202 STAG 205


>gb|EXB62650.1| hypothetical protein L484_023946 [Morus notabilis]
          Length = 258

 Score =  102 bits (254), Expect = 7e-19
 Identities = 48/74 (64%), Positives = 58/74 (78%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           +CS   +SALE +STCKL NLTV+ ELGCCLLHRSG+LTID+C+LQCESNPLD LS  I+
Sbjct: 136 ICSRGSDSALEFLSTCKLANLTVKAELGCCLLHRSGRLTIDDCVLQCESNPLDFLSCPIV 195

Query: 187 STAGAAV*TAGPNK 146
           STA   V ++   K
Sbjct: 196 STASGQVFSSSMKK 209


>gb|EMJ20028.1| hypothetical protein PRUPE_ppa010167mg [Prunus persica]
          Length = 261

 Score =  101 bits (252), Expect = 1e-18
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = -3

Query: 364 CSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAIIS 185
           CS   +SALE++STCKL NLTV+ ELGCCLLHR+G+LTI+ C+LQCESNPLDHLS  I+S
Sbjct: 140 CSRASDSALELLSTCKLANLTVKAELGCCLLHRNGRLTIEGCVLQCESNPLDHLSCPIVS 199

Query: 184 TAGA 173
           TA A
Sbjct: 200 TASA 203


>gb|ESW20963.1| hypothetical protein PHAVU_005G029600g, partial [Phaseolus
           vulgaris]
          Length = 303

 Score =  101 bits (251), Expect = 2e-18
 Identities = 48/66 (72%), Positives = 55/66 (83%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           VCS   +SALE +STCKL NLTVR ELGCCLLHR G+LTID CILQCESNPLD+LS  I+
Sbjct: 171 VCSRGSDSALEFISTCKLANLTVRAELGCCLLHRKGRLTIDGCILQCESNPLDYLSCPIV 230

Query: 187 STAGAA 170
           STA ++
Sbjct: 231 STASSS 236


>ref|XP_006420750.1| hypothetical protein CICLE_v10005678mg [Citrus clementina]
           gi|557522623|gb|ESR33990.1| hypothetical protein
           CICLE_v10005678mg [Citrus clementina]
          Length = 258

 Score =  100 bits (250), Expect = 2e-18
 Identities = 49/74 (66%), Positives = 59/74 (79%)
 Frame = -3

Query: 367 VCSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAII 188
           +CS   +SALE +STCKL NLTVR ELGCCLLHRSG+LTID C+LQCE+NPLD LS  I+
Sbjct: 137 ICSRGSDSALEFLSTCKLANLTVRAELGCCLLHRSGRLTIDGCVLQCETNPLDFLSCPIV 196

Query: 187 STAGAAV*TAGPNK 146
           STA + + T+ P K
Sbjct: 197 STARSCI-TSTPMK 209


>ref|XP_002461155.1| hypothetical protein SORBIDRAFT_02g041860 [Sorghum bicolor]
           gi|241924532|gb|EER97676.1| hypothetical protein
           SORBIDRAFT_02g041860 [Sorghum bicolor]
          Length = 248

 Score =  100 bits (250), Expect = 2e-18
 Identities = 45/62 (72%), Positives = 53/62 (85%)
 Frame = -3

Query: 364 CSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAIIS 185
           CS   ++ALE +STCK+ NLT+R ELGCCLLHRSGKLTI EC+LQCE NPLD+LS+ IIS
Sbjct: 128 CSRGFDNALEFLSTCKIANLTIRAELGCCLLHRSGKLTIQECLLQCEQNPLDYLSFPIIS 187

Query: 184 TA 179
           TA
Sbjct: 188 TA 189


>ref|XP_003559852.1| PREDICTED: F-box protein SKIP5-like [Brachypodium distachyon]
          Length = 248

 Score =  100 bits (249), Expect = 3e-18
 Identities = 44/62 (70%), Positives = 54/62 (87%)
 Frame = -3

Query: 364 CSLFLNSALEIMSTCKLTNLTVRTELGCCLLHRSGKLTIDECILQCESNPLDHLSYAIIS 185
           CS    +ALE++STCK+ NLT+R ELGCCLLHRSGKLTI+EC+LQCE NP+D+LS+ IIS
Sbjct: 128 CSRGSENALELLSTCKIANLTIRAELGCCLLHRSGKLTIEECLLQCEQNPMDYLSFPIIS 187

Query: 184 TA 179
           TA
Sbjct: 188 TA 189


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