BLASTX nr result
ID: Atropa21_contig00020108
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00020108
(653 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595... 77 1e-21
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis... 79 2e-20
ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578... 57 2e-14
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 46 6e-12
ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein A... 45 6e-11
ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein A... 44 8e-11
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 45 1e-10
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 43 4e-10
ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264... 45 1e-09
ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein A... 47 2e-09
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A... 46 3e-09
ref|XP_004231462.1| PREDICTED: uncharacterized protein LOC101258... 50 2e-08
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A... 46 2e-08
ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein A... 39 3e-08
ref|XP_004247265.1| PREDICTED: putative ribonuclease H protein A... 48 5e-08
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 47 1e-07
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A... 42 4e-07
ref|XP_004234299.1| PREDICTED: putative ribonuclease H protein A... 48 4e-07
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A... 42 8e-07
ref|XP_004253407.1| PREDICTED: uncharacterized protein LOC101250... 45 1e-06
>ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595469 [Solanum tuberosum]
Length = 1079
Score = 77.4 bits (189), Expect(2) = 1e-21
Identities = 38/102 (37%), Positives = 57/102 (55%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEENGYVITHCYREANKLGDKLAAISHGKDV 381
DS L+ C+N P +I ++E + +E G+++ HCYREAN+ D LA+ S
Sbjct: 977 DSRLLVDCVNNSSVTPWRILEEVNELKNHMETTGFILNHCYREANQAADALASTSFSSPG 1036
Query: 382 IQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTKDSNLIYDP 507
+ + EL A VKGL+ MDR + FR + K +LI+DP
Sbjct: 1037 NILYEYFEELPAKVKGLMTMDRWGVTSFRTRQKKKQDLIWDP 1078
Score = 52.0 bits (123), Expect(2) = 1e-21
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEICDGGGTIRDSNGRIIFAQ*FC*GCCNAIWIE 160
W++P + VK+NSDGSC C GGG IRD +G ++FA G + W E
Sbjct: 902 WLKPSISFVKINSDGSCKDGYCGGGGVIRDHSGSLVFAYSLNLGQGTSNWAE 953
>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
Length = 1155
Score = 79.0 bits (193), Expect(2) = 2e-20
Identities = 40/89 (44%), Positives = 58/89 (65%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEENGYVITHCYREANKLGDKLAAISHGKDV 381
DS+L+ K I + +P ++ + + QK+VEE+G++I HC REAN+ DKLA+IS DV
Sbjct: 1067 DSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINHCLREANQPADKLASISLSTDV 1126
Query: 382 IQTFNFLSELDAAVKGLVNMDR*NIYYFR 468
F + L + VKGLVN+DR N+ FR
Sbjct: 1127 NHVFKSYANLPSLVKGLVNLDRMNLPTFR 1155
Score = 46.6 bits (109), Expect(2) = 2e-20
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEICDGGGTIRDSNGRIIFA 118
WI+P KLN+DGSCV C GGG +R++ G++I A
Sbjct: 992 WIKPPTMFAKLNTDGSCVNGRCGGGGILRNALGQVIMA 1029
>ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578253 [Solanum tuberosum]
Length = 277
Score = 57.4 bits (137), Expect(3) = 2e-14
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +1
Query: 181 LTLCVGK-DSLLITKCINKE*KLPLKISRLIDENQKLVEENGYVITHCYREANKLGDKLA 357
+ + +G+ DSLL++K I +E K P KIS + E QK++E++ + I HC++EANK D LA
Sbjct: 210 MEMAIGETDSLLLSKTIKREWKSPWKISNQVQEIQKMIEDHKFSIVHCFKEANKPADALA 269
Query: 358 AIS 366
++
Sbjct: 270 RLT 272
Score = 39.3 bits (90), Expect(3) = 2e-14
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEICDGGGTIRDSNGRIIFA 118
WI+P VKLNSDGS GG IRD G IFA
Sbjct: 143 WIKPPSLRVKLNSDGSFSNGQSGSGGIIRDQEGDFIFA 180
Score = 28.1 bits (61), Expect(3) = 2e-14
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 120 SNFAEAAAMLFGLKWCNRNSFNSMCGK 200
SN EA A+L+GL+WC G+
Sbjct: 190 SNTVEAEALLYGLQWCASKGMEMAIGE 216
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 45.8 bits (107), Expect(3) = 6e-12
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEENGYV-ITHCYREANKLGDKLAAISHGKD 378
DS L++K I+ +P + I + Q +V + Y H +REAN D LA SH +D
Sbjct: 910 DSELLSKWIDNSINIPWRCQPTIYQIQDIVNKMEYFQCQHIFREANGTADLLAKWSHQQD 969
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
++Q F +L ++G +++ + FR + K
Sbjct: 970 IVQHFYTQQQLIGTIRGNYLLEKMGVQSFRRRKLK 1004
Score = 40.8 bits (94), Expect(3) = 6e-12
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEI--CDGGGTIRDSNGRIIFA 118
W +P + KLN+DGS + I GGG +RD NG++I+A
Sbjct: 833 WEKPSLGIFKLNTDGSAIHNINKIGGGGILRDHNGKLIYA 872
Score = 29.6 bits (65), Expect(3) = 6e-12
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 120 SNFAEAAAMLFGLKWCNRNSF 182
+NFAE A L+GL WC ++ +
Sbjct: 882 NNFAEMKAALYGLSWCEQHGY 902
>ref|XP_004248867.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 45.1 bits (105), Expect(3) = 6e-11
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEENGYV-ITHCYREANKLGDKLAAISHGKD 378
DS L+ K IN +P + + + + Q + + Y H YREAN D LA H +
Sbjct: 81 DSELLCKWINNTVGIPWRCQQTVQQIQDISRKLDYFQCKHVYREANSTADLLAKWCHNLN 140
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
++Q F +L +++ +D+ I FR + TK
Sbjct: 141 ILQHFYTTQQLFGSIRESYILDKMEIKNFRRRKTK 175
Score = 38.9 bits (89), Expect(3) = 6e-11
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEI--CDGGGTIRDSNGRIIFA 118
W +P + K+N+DGS +QE GGG +RD G +I+A
Sbjct: 4 WRKPDDGIYKINTDGSALQESGNIGGGGIVRDHQGNLIYA 43
Score = 28.9 bits (63), Expect(3) = 6e-11
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 120 SNFAEAAAMLFGLKWCNRNSFNSM 191
+N AE A L+GL WC ++ + S+
Sbjct: 53 NNIAEIKATLYGLDWCEQHGYKSI 76
>ref|XP_004233577.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 44.3 bits (103), Expect(3) = 8e-11
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEENGYV-ITHCYREANKLGDKLAAISHGKD 378
DS +I + IN K P + + + + + + + Y H YREAN D L SH D
Sbjct: 81 DSEMICQWINNIIKPPWRCQQTVQQLLQTISKLQYFHCKHIYREANNTADLLVKWSHTID 140
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
+ Q F +L ++G +++ +IY FR + K
Sbjct: 141 IPQHFYTPQQLKGTIRGSYMLEKMDIYNFRRRKIK 175
Score = 38.9 bits (89), Expect(3) = 8e-11
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQE--ICDGGGTIRDSNGRIIFA 118
WI+P+ + KLN+DGS + + GGG +RD G++I+A
Sbjct: 4 WIKPKQYIYKLNTDGSALADNGKIGGGGVLRDHQGKLIYA 43
Score = 29.3 bits (64), Expect(3) = 8e-11
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 120 SNFAEAAAMLFGLKWCNRNSFNSM 191
+NFAE A FG++WC ++ + ++
Sbjct: 53 NNFAELKAATFGIEWCEQHGYKNI 76
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 45.1 bits (105), Expect(3) = 1e-10
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEE-NGYVITHCYREANKLGDKLAAISHGKD 378
DS L+ IN +P + LI + +++ + + + H YREAN D L+ SH +
Sbjct: 1354 DSKLLCNWINSNINIPWRYEELIQQIHQIIRKMDQFQCHHIYREANCTADLLSKWSHNLE 1413
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
++Q F +L ++G +++ + FR + K
Sbjct: 1414 ILQKFYTTRQLKEPIRGSYLLEKMGVQNFRRRKLK 1448
Score = 38.1 bits (87), Expect(3) = 1e-10
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEI--CDGGGTIRDSNGRIIFA 118
W +P KLN+DGS +Q GGG +RD+ G+II+A
Sbjct: 1277 WNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYA 1316
Score = 28.5 bits (62), Expect(3) = 1e-10
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 111 FLPSNFAEAAAMLFGLKWCNRNSFNSM 191
F +NFAE A L GL WC ++ + +
Sbjct: 1323 FGTNNFAEIKAALHGLDWCEQHGYKKI 1349
>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
lycopersicum]
Length = 1333
Score = 42.7 bits (99), Expect(3) = 4e-10
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKL-VEENGYVITHCYREANKLGDKLAAISHGKD 378
+S L+ I K+P + L+ + Q++ ++ + H YREAN D L+ S+ +
Sbjct: 1233 NSELLYNWIKNTTKIPWRYEDLVQQIQQISMKMEQFHCHHIYREANNTADLLSKWSNNCE 1292
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
++Q F +L+ A+KG +++ + FR + K
Sbjct: 1293 IVQHFYTTRQLEGAIKGSYILEKMGVQNFRRRKLK 1327
Score = 37.4 bits (85), Expect(3) = 4e-10
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEI--CDGGGTIRDSNGRIIFA 118
W +P KLN+DGS +Q GGG +RD G+I++A
Sbjct: 1156 WNKPALGTYKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYA 1195
Score = 29.6 bits (65), Expect(3) = 4e-10
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 120 SNFAEAAAMLFGLKWCNRNSFNSM 191
+NFAE A L+G++WC ++ + +
Sbjct: 1205 NNFAEIKAALYGMEWCEQHGYKKV 1228
>ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264807 [Solanum
lycopersicum]
Length = 934
Score = 44.7 bits (104), Expect(3) = 1e-09
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEENGYV-ITHCYREANKLGDKLAAISHGKD 378
DS L+ K I +P + I + Q + + Y H YREAN + LA SH D
Sbjct: 834 DSELLVKWITNTQSIPWRSQPDIQQLQDISKNMEYFQCQHIYREANATAELLAKWSHKMD 893
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
+IQ F +L A+KG +++ + FR + K
Sbjct: 894 IIQHFYTSQQLRGAIKGNYILEKMGMQLFRRRKIK 928
Score = 34.3 bits (77), Expect(3) = 1e-09
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEI--CDGGGTIRDSNGRIIF 115
W RP + KLN+DGS + GGG +RD ++I+
Sbjct: 757 WNRPPSGIYKLNTDGSAIHNTGQTGGGGILRDDQDKLIY 795
Score = 29.6 bits (65), Expect(3) = 1e-09
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 111 FLPSNFAEAAAMLFGLKWCNRNSF 182
F +NFAE A L GL WC ++ F
Sbjct: 803 FGTNNFAEIQAALHGLNWCQQHGF 826
>ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 207
Score = 47.0 bits (110), Expect(3) = 2e-09
Identities = 29/107 (27%), Positives = 53/107 (49%)
Frame = +1
Query: 163 GATEIVLTLCVGKDSLLITKCINKE*KLPLKISRLIDENQKLVEENGYVITHCYREANKL 342
G T L L DS++I +N + LK+ ++ID ++V+++ +THC+RE+N++
Sbjct: 99 GLTNFTLEL----DSMIIVNMVNNKSNNNLKLRQIIDNIVEIVDQSNAQVTHCFRESNQV 154
Query: 343 GDKLAAISHGKDVIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
D LA + + + +L KG +D+ + R K K
Sbjct: 155 ADFLAKRAARLNQMMILTSFRQLPEMAKGSSFLDKCQMPCIRTKFDK 201
Score = 34.7 bits (78), Expect(3) = 2e-09
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEICDG--GGTIRDSNGRIIFA 118
W PQ +K+N+DGS + EI GG R+SNG ++ A
Sbjct: 31 WSTPQIGTIKVNTDGSFLWEIGSAGIGGIARNSNGEMVMA 70
Score = 25.8 bits (55), Expect(3) = 2e-09
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 120 SNFAEAAAMLFGLKWCNRNSFNS 188
+N AEA A FG KWC++ +
Sbjct: 80 NNMAEALAAEFGGKWCSQQGLTN 102
>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 601
Score = 45.8 bits (107), Expect(2) = 3e-09
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQE--ICDGGGTIRDSNGRIIFA 118
WI+P KLN+DGSC+QE +GGG +RD G IIFA
Sbjct: 424 WIKPTIGRYKLNTDGSCLQENGNIEGGGILRDHQGSIIFA 463
Score = 42.0 bits (97), Expect(2) = 3e-09
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +1
Query: 160 NGATEIVLTLCVGKDSLLITKCINKE*KLPLKISRLIDENQKLVEE-NGYVITHCYREAN 336
+G +IVL + DS L++K I+ ++P + + + ++ ++ + + H YRE N
Sbjct: 491 HGYKDIVLEI----DSELLSKWISNTIQIPWRCQQYVQHIHEITKKLHHFQCQHIYREEN 546
Query: 337 KLGDKLAAISHGKDVIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
D LA SH ++ Q F + ++G +++ I FR + K
Sbjct: 547 STADLLAKWSHNIEIPQDFYTTRQFKGTIRGSYILEKMGIQNFRRRKVK 595
>ref|XP_004231462.1| PREDICTED: uncharacterized protein LOC101258709 [Solanum
lycopersicum]
Length = 845
Score = 50.1 bits (118), Expect(3) = 2e-08
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEENGYV-ITHCYREANKLGDKLAAISHGKD 378
DS L+ K IN +P + + I + Q + + Y H YREAN D LA SH D
Sbjct: 745 DSELLVKWINNTQYIPWRSQQDIQQLQDISKNMEYFQCQHIYREANATADLLAKGSHKMD 804
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
+IQ F +L A+KG +D+ + FR + K
Sbjct: 805 IIQHFYTSQQLRGAIKGNYILDKMGMQLFRRRKIK 839
Score = 29.6 bits (65), Expect(3) = 2e-08
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 111 FLPSNFAEAAAMLFGLKWCNRNSF 182
F +NFAE A L GL WC ++ F
Sbjct: 714 FGTNNFAEIQAALHGLNWCQQHGF 737
Score = 24.3 bits (51), Expect(3) = 2e-08
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 74 GGGTIRDSNGRIIFA 118
GGG +RD G++I+A
Sbjct: 693 GGGILRDDQGKLIYA 707
>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 45.8 bits (107), Expect(3) = 2e-08
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLV-EENGYVITHCYREANKLGDKLAAISHGKD 378
DS L+ + I+K+ +++ I+ Q L+ + + TH +REAN + D L+ SH
Sbjct: 208 DSQLVVQWISKKTAPHWSVTKQIERIQHLIMQTQNFKCTHIFREANWVADSLSKHSHNTT 267
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTKDSNLIYDP 507
Q + ++L + MD N+ FR K TK I+DP
Sbjct: 268 APQVYFSSTQLPKEAQAYYQMDLLNMPSFRRKKTKK---IFDP 307
Score = 33.9 bits (76), Expect(3) = 2e-08
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEI--CDGGGTIRDSNGRIIFA 118
W RP +K+N+DGS + + GG +RD G+++ A
Sbjct: 131 WNRPPEQWIKINTDGSALTNLGQIGAGGILRDREGKMVLA 170
Score = 24.3 bits (51), Expect(3) = 2e-08
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 120 SNFAEAAAMLFGLKW 164
+N AE AA LFGL W
Sbjct: 180 NNKAETAAALFGLSW 194
>ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 927
Score = 38.9 bits (89), Expect(3) = 3e-08
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEENGYV-ITHCYREANKLGDKLAAISHGKD 378
DS +I + IN K P + + + + + Y H YREAN D LA SH D
Sbjct: 834 DSEIICQWINNTIKPPWRCQHNVQQLLQTTSKFQYFHCKHIYREANNTADLLAKWSHTMD 893
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMK 474
+ Q F +L ++ +++ +I+ FR +
Sbjct: 894 IPQHFYTPQQLKGTIRESYMLEKMDIHNFRRR 925
Score = 35.0 bits (79), Expect(3) = 3e-08
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEI--CDGGGTIRDSNGRIIFA 118
WI+P+ ++ KLN++GS + E GGG +R G++I A
Sbjct: 757 WIKPKQHVYKLNTNGSALAESGKIGGGGVLRHHQGKLICA 796
Score = 29.3 bits (64), Expect(3) = 3e-08
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 123 NFAEAAAMLFGLKWCNRNSFNSM 191
NFAE A FG+ WC ++ + S+
Sbjct: 807 NFAELKAATFGIDWCEQHGYKSI 829
>ref|XP_004247265.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 193
Score = 48.1 bits (113), Expect(2) = 5e-08
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEE-NGYVITHCYREANKLGDKLAAISHGKD 378
D L+ ++ + P + I E ++V + + ITH YREAN D+L+ SH D
Sbjct: 93 DLELVIHLLSNQTNYPWNLQPYIREIHRIVHQLERFKITHVYREANNTADRLSKYSHNTD 152
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
++Q F +L +G +++ + FR K K
Sbjct: 153 IVQHFYIKDQLPTLARGSFIIEKLGMANFRRKKLK 187
Score = 35.4 bits (80), Expect(2) = 5e-08
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQE--ICDGGGTIRDSNGRIIFA 118
W +PQ +KLN+DGS + GGG +RD G +I+A
Sbjct: 16 WEKPQQPFLKLNTDGSALNNPGRNGGGGIVRDYQGNMIYA 55
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 46.6 bits (109), Expect(2) = 1e-07
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +1
Query: 160 NGATEIVLTLCVGKDSLLITKCINKE*KLPLKISRLIDENQKLVEE-NGYVITHCYREAN 336
+G +I+L + DS L+ K I + +P + I + Q + + + H YREAN
Sbjct: 279 HGFEKIILEV----DSELLHKWIINKSSVPWRCLHYIQQIQNISNKMEVFQCKHIYREAN 334
Query: 337 KLGDKLAAISHGKDVIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
D LA SH D+IQ F +L+ +KG +++ + FR + K
Sbjct: 335 GTADLLAKWSHSMDIIQQFYTSQQLEGVIKGSYILEKMGMQLFRRRKLK 383
Score = 35.4 bits (80), Expect(2) = 1e-07
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEI--CDGGGTIRDSNGRIIFA 118
W RP + KLN+DGS GGG +RD G++I+A
Sbjct: 212 WERPPEGIHKLNTDGSAKHNTGKIGGGGILRDHQGKLIYA 251
>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 338
Score = 42.0 bits (97), Expect(3) = 4e-07
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLV-EENGYVITHCYREANKLGDKLAAISHGKD 378
D+ L+ K I ++ + I+ Q L+ + ++ TH +REAN + D L+ SH
Sbjct: 238 DAQLVVKWITRKEVPHWSVINQIERIQHLIMQTQNFMCTHIFREANWVADALSKHSHNIP 297
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTKDSNLIYDP 507
Q + ++L + MD N+ FR K TK I+DP
Sbjct: 298 APQVYFSNNQLPREAQAYYQMDLRNMPSFRRKKTKK---IFDP 337
Score = 32.7 bits (73), Expect(3) = 4e-07
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQE--ICDGGGTIRDSNGRIIFA 118
W RP +K+N+DGS + GG +RD G+++ A
Sbjct: 161 WNRPSEQWIKINTDGSALTNPGQTGAGGILRDKEGKMVMA 200
Score = 25.0 bits (53), Expect(3) = 4e-07
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 120 SNFAEAAAMLFGLKW 164
+N AEA A+LFGL W
Sbjct: 210 NNTAEAEAVLFGLSW 224
>ref|XP_004234299.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 193
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEENGYV-ITHCYREANKLGDKLAAISHGKD 378
DS L+ ++ + P + I E ++V + ITH YREAN D+L+ SH D
Sbjct: 93 DSELVIHWLSNQTYYPWNLQPYILEIHRIVHHLERIKITHLYREANNTADRLSQYSHNTD 152
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
++Q F +L +G +++ + FR K K
Sbjct: 153 IVQNFYIKDQLPTLARGSFILEKLGMANFRRKKLK 187
Score = 32.7 bits (73), Expect(2) = 4e-07
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCVQEI--CDGGGTIRDSNGRIIFA 118
W +PQ + +KLN+ S + +GGG +RD G +I+A
Sbjct: 16 WEKPQQSFLKLNTGRSALNNPGKIEGGGIVRDFQGNMIYA 55
>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 213
Score = 42.4 bits (98), Expect(3) = 8e-07
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLV-EENGYVITHCYREANKLGDKLAAISHGKD 378
DS L+ + I+ + P ++ ++ Q+++ + + +H +REAN + D L+ SH
Sbjct: 113 DSQLVVQWISNKIAPPWNLTNQLERLQQIIIQTQNFRCSHIFREANWVADALSKHSHNNT 172
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTKDSNLIYDP 507
Q + ++L MD ++ FR K TK +I+DP
Sbjct: 173 APQVYVHSNQLPKEAHAYYQMDLMDMPSFRRKKTK---MIFDP 212
Score = 33.9 bits (76), Expect(3) = 8e-07
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 5 WIRPQPNMVKLNSDGSCV--QEICDGGGTIRDSNGRIIFA 118
W +P +K+N+DGS + + GG IRD G++I A
Sbjct: 36 WFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMA 75
Score = 22.3 bits (46), Expect(3) = 8e-07
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 120 SNFAEAAAMLFGLKWCNRNSFNSM 191
+N AE A LFGL W F ++
Sbjct: 85 NNQAEIEAALFGLTWAFELGFKNI 108
>ref|XP_004253407.1| PREDICTED: uncharacterized protein LOC101250876, partial [Solanum
lycopersicum]
Length = 445
Score = 45.4 bits (106), Expect(3) = 1e-06
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 202 DSLLITKCINKE*KLPLKISRLIDENQKLVEENGYV-ITHCYREANKLGDKLAAISHGKD 378
DS L+ I ++P + L+ + Q ++ + Y H YREAN D L+ SHG +
Sbjct: 345 DSELLCNWIKNIIQIPWRYEDLVQQIQHIIRKMDYFQCHHIYREANSTADLLSKWSHGLE 404
Query: 379 VIQTFNFLSELDAAVKGLVNMDR*NIYYFRMKDTK 483
++Q +L+ A+KG +++ FR + K
Sbjct: 405 LVQHIYTPRQLEGAIKGSYLLEKMGTQNFRRRKLK 439
Score = 28.1 bits (61), Expect(3) = 1e-06
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 111 FLPSNFAEAAAMLFGLKWCNRNSF 182
F +N AE A L+GL+WC ++ +
Sbjct: 314 FGTNNIAEIKAALYGLEWCEQHGY 337
Score = 24.3 bits (51), Expect(3) = 1e-06
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 74 GGGTIRDSNGRIIFA 118
GGG +RD G+I++A
Sbjct: 293 GGGILRDHQGKIVYA 307