BLASTX nr result

ID: Atropa21_contig00020059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00020059
         (709 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245756.1| PREDICTED: scarecrow-like protein 27-like is...    90   5e-17
ref|XP_004245757.1| PREDICTED: scarecrow-like protein 27-like is...    89   1e-15
ref|XP_006355471.1| PREDICTED: scarecrow-like protein 22-like [S...    85   2e-14
gb|AFV91191.1| GRAS family transcription regulator [Capsicum ann...    72   2e-10

>ref|XP_004245756.1| PREDICTED: scarecrow-like protein 27-like isoform 1 [Solanum
           lycopersicum]
          Length = 745

 Score = 89.7 bits (221), Expect(2) = 5e-17
 Identities = 45/55 (81%), Positives = 49/55 (89%), Gaps = 3/55 (5%)
 Frame = +2

Query: 518 KMIVIPQNNNIPAKGVLDVSGFMPSISS---PEAQICKKDTNFTRNEPVSVLDTR 673
           +MIVIPQ+NN+PAKGVL VSGF+PSISS   PEA ICKKD NFTRNEPVSVLDTR
Sbjct: 44  QMIVIPQSNNLPAKGVLGVSGFVPSISSSSSPEASICKKDANFTRNEPVSVLDTR 98



 Score = 24.6 bits (52), Expect(2) = 5e-17
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +1

Query: 478 VQILVKYKINQVTK 519
           V+ILVKYKI QV K
Sbjct: 3   VKILVKYKIRQVAK 16


>ref|XP_004245757.1| PREDICTED: scarecrow-like protein 27-like isoform 2 [Solanum
           lycopersicum]
          Length = 701

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 45/54 (83%), Positives = 48/54 (88%), Gaps = 3/54 (5%)
 Frame = +2

Query: 521 MIVIPQNNNIPAKGVLDVSGFMPSISS---PEAQICKKDTNFTRNEPVSVLDTR 673
           MIVIPQ+NN+PAKGVL VSGF+PSISS   PEA ICKKD NFTRNEPVSVLDTR
Sbjct: 1   MIVIPQSNNLPAKGVLGVSGFVPSISSSSSPEASICKKDANFTRNEPVSVLDTR 54


>ref|XP_006355471.1| PREDICTED: scarecrow-like protein 22-like [Solanum tuberosum]
          Length = 700

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 43/54 (79%), Positives = 48/54 (88%), Gaps = 3/54 (5%)
 Frame = +2

Query: 521 MIVIPQNNNIPAKGVLDVSGFMPSISS---PEAQICKKDTNFTRNEPVSVLDTR 673
           MIVIPQ++++PAKGVL VSGF+PSISS   PEA ICKKD NFTRNEPVSVLDTR
Sbjct: 1   MIVIPQSSSLPAKGVLGVSGFVPSISSSSSPEAAICKKDANFTRNEPVSVLDTR 54


>gb|AFV91191.1| GRAS family transcription regulator [Capsicum annuum]
          Length = 693

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 40/56 (71%), Positives = 42/56 (75%), Gaps = 5/56 (8%)
 Frame = +2

Query: 521 MIVIPQNNNIPAKGVLDVSGFMPSI-----SSPEAQICKKDTNFTRNEPVSVLDTR 673
           MIVIPQ N+IPAKGVL VS F+PSI     SS EA I  KD NFTRNEPVS LDTR
Sbjct: 1   MIVIPQGNSIPAKGVLCVSNFVPSITSSSSSSQEAPIFMKDANFTRNEPVSELDTR 56


Top