BLASTX nr result

ID: Atropa21_contig00019452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00019452
         (477 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239027.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar pr...    62   5e-20
ref|XP_006348659.1| PREDICTED: nucleolar protein 14-like [Solanu...    64   6e-20

>ref|XP_004239027.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 14-like [Solanum
           lycopersicum]
          Length = 860

 Score = 62.0 bits (149), Expect(2) = 5e-20
 Identities = 32/59 (54%), Positives = 37/59 (62%)
 Frame = +2

Query: 299 QGKTETIKDWQQXXXXXXXXXXXXXXXXXXXHAKKVLKIKDHKEVSVKGKEVCTSQTKK 475
           QGKT+TIKDW+Q                    AKKV+KIKDHK+V+VKGKE  TSQTKK
Sbjct: 349 QGKTQTIKDWEQSDDDIIDTEEEDDDEGSGDDAKKVMKIKDHKQVAVKGKEDGTSQTKK 407



 Score = 61.2 bits (147), Expect(2) = 5e-20
 Identities = 33/64 (51%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
 Frame = +1

Query: 1   LEQERQKRMXXXXXXXXXXXXXXXXXXKLVKDPRTIAGDDL----EEVPKSKLGWIGEIL 168
           LEQERQKRM                  K +KDPRTI+GDDL    EE P+ KLGWI EIL
Sbjct: 245 LEQERQKRMAAADDGSDEDGNASDDNSKSIKDPRTISGDDLGDDLEEAPRDKLGWIAEIL 304

Query: 169 RRKK 180
           R+K+
Sbjct: 305 RKKE 308


>ref|XP_006348659.1| PREDICTED: nucleolar protein 14-like [Solanum tuberosum]
          Length = 940

 Score = 63.9 bits (154), Expect(2) = 6e-20
 Identities = 34/64 (53%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
 Frame = +1

Query: 1   LEQERQKRMXXXXXXXXXXXXXXXXXXKLVKDPRTIAGDDL----EEVPKSKLGWIGEIL 168
           LEQERQKRM                  KL+KDPRTI+GDDL    EE P++KLGWI EIL
Sbjct: 325 LEQERQKRMAAADDGSDEDGNASDDDSKLIKDPRTISGDDLGDDLEEAPRTKLGWIAEIL 384

Query: 169 RRKK 180
           R+K+
Sbjct: 385 RKKE 388



 Score = 58.9 bits (141), Expect(2) = 6e-20
 Identities = 31/59 (52%), Positives = 35/59 (59%)
 Frame = +2

Query: 299 QGKTETIKDWQQXXXXXXXXXXXXXXXXXXXHAKKVLKIKDHKEVSVKGKEVCTSQTKK 475
           QGKT+TIKDW+Q                    AKKV+KIKDHK+  VKGKEV T QTKK
Sbjct: 429 QGKTQTIKDWEQSDDDIIDTEEEDDDEGSGDDAKKVMKIKDHKQEVVKGKEVGTLQTKK 487


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