BLASTX nr result
ID: Atropa21_contig00019138
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00019138
(991 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi... 389 e-106
ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containi... 358 1e-96
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 269 1e-69
emb|CBI22375.3| unnamed protein product [Vitis vinifera] 267 4e-69
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 267 4e-69
gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily p... 260 5e-67
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi... 259 9e-67
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,... 250 7e-64
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu... 234 4e-59
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis] 231 4e-58
ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containi... 226 1e-56
gb|ESW16008.1| hypothetical protein PHAVU_007G121900g [Phaseolus... 221 3e-55
ref|XP_006589209.1| PREDICTED: pentatricopeptide repeat-containi... 221 3e-55
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ... 221 3e-55
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi... 219 1e-54
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps... 218 2e-54
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi... 218 4e-54
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ... 216 1e-53
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana] 215 2e-53
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar... 215 2e-53
>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum tuberosum]
Length = 583
Score = 389 bits (1000), Expect = e-106
Identities = 200/241 (82%), Positives = 204/241 (84%), Gaps = 3/241 (1%)
Frame = +3
Query: 276 MTRIITAEIFPQCSFFSNNLKPTSQSQKHNFVVRCSS--NDHSKIKHRNNQRVNVSTHN- 446
MTRII AEIFPQC FFSNNLKP SQS KHNFVVRCSS ND SK+K RN RV +S+ N
Sbjct: 1 MTRIIPAEIFPQCPFFSNNLKPKSQSSKHNFVVRCSSSSNDQSKVKTRNPLRVKISSENY 60
Query: 447 RPAHVQSNDMKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKA 626
RP H DMKVLNWSCKVGKYDETLYLLECK+KSGYKPDVILCTKLIKGFCNSKNSDK
Sbjct: 61 RPTH----DMKVLNWSCKVGKYDETLYLLECKLKSGYKPDVILCTKLIKGFCNSKNSDKG 116
Query: 627 EKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSL 806
KVMQILEQFGE DVFAYNALISGFCKMNKIE ANKVLNRMKARGFPPDSVTYNILIGSL
Sbjct: 117 VKVMQILEQFGEPDVFAYNALISGFCKMNKIEEANKVLNRMKARGFPPDSVTYNILIGSL 176
Query: 807 CDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
CDR EENNC PTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD
Sbjct: 177 CDRGKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 236
Query: 987 M 989
M
Sbjct: 237 M 237
Score = 87.0 bits (214), Expect = 1e-14
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET-DVFAY 680
GK+ + L+ + +G +P+V+ + L+ C D+A +++I+ G T D F Y
Sbjct: 287 GKWSDGEKLMNEMLSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTY 346
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LIS FCK +++ A K L+ M + G PD V YN ++ ++C +
Sbjct: 347 DPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMC-KKGKADEAMEVFEKLA 405
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C P V TY L+ A GG A+K++ EM+ +G+ PD
Sbjct: 406 EIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPD 447
Score = 84.3 bits (207), Expect = 6e-14
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Frame = +3
Query: 495 CKVGKYDETLYLLE-CKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQFGETD 668
C GK L LL+ K ++ KP VI T LI+ +A K++ ++L + + D
Sbjct: 177 CDRGKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 236
Query: 669 VFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXX 848
++ YNA+I G C+ ++ A + + + ++G PD ++YNIL+ +L
Sbjct: 237 MYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSDGEKLM 296
Query: 849 XXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C P V+TY+IL+ A +G + EA+ LL M+ +GL PD
Sbjct: 297 NEMLSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPD 342
Score = 84.3 bits (207), Expect = 6e-14
Identities = 52/164 (31%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK DE + LL+ M G PD LI FC D A K + + G D+
Sbjct: 319 CRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLDLAIKFLDYMISNGCLPDI 378
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN ++S CK K + A +V ++ G PPD TYN L+ +L +
Sbjct: 379 VNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSE 438
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQP 983
E+ +P ITY LI +G ++EA+ LL +M G P
Sbjct: 439 MIEK-GVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPP 481
Score = 82.8 bits (203), Expect = 2e-13
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
CK G+ D + L+ + +G PD++ ++ C +D+A +V + L + G DV
Sbjct: 354 CKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDV 413
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN L+S A K+++ M +G PD +TYN LI LC R
Sbjct: 414 STYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLC-RDGMVNEALDLLG 472
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E N PTVITY IL+ + EA+++L EM+ +G +P+
Sbjct: 473 DMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPN 517
Score = 76.3 bits (186), Expect = 2e-11
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEK-VMQILEQF 656
+L+ CK GK DE + + E + G PDV L+ N+ +A K V +++E+
Sbjct: 384 ILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKG 443
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
+ D YNALIS C+ + A +L M+ GFPP +TYNIL+ LC
Sbjct: 444 VDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAI 503
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKL 950
E+ P TY +LIE G +AM++
Sbjct: 504 EVLAEMVEKGR-RPNETTYILLIEGIGFSGRRVQAMEM 540
Score = 73.9 bits (180), Expect = 9e-11
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDVFAY 680
G E + LL+ + G +PD+ +I+G C K D+A + ++ L G + DV +Y
Sbjct: 216 GGIHEAMKLLDEMLSRGLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISY 275
Query: 681 NALISGFCK-MNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXX 857
N L+ K K++N M + G P+ VTY+IL+ +LC R
Sbjct: 276 NILLRALLHHKGKWSDGEKLMNEMLSAGCEPNVVTYSILMSALC-RDGKLDEAINLLKIM 334
Query: 858 EENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
+ P TY LI A G + A+K LD M+S G PD+
Sbjct: 335 MDKGLTPDTFTYDPLISAFCKGGRLDLAIKFLDYMISNGCLPDI 378
Score = 69.7 bits (169), Expect = 2e-09
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKN--SDKAEKVMQILEQ 653
++ C+ D+ + G KPDVI L++ + K SD + + ++L
Sbjct: 243 IIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSDGEKLMNEMLSA 302
Query: 654 FGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXX 833
E +V Y+ L+S C+ K++ A +L M +G PD+ TY+ LI + C +
Sbjct: 303 GCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFC-KGGRLDL 361
Query: 834 XXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
N C P ++ Y ++ +G EAM++ +++ G PD+
Sbjct: 362 AIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDV 413
>ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum lycopersicum]
Length = 575
Score = 358 bits (920), Expect = 1e-96
Identities = 185/239 (77%), Positives = 195/239 (81%), Gaps = 1/239 (0%)
Frame = +3
Query: 276 MTRIITAEIFPQCSFFSNNLKPTSQSQKHNFVVRCS-SNDHSKIKHRNNQRVNVSTHNRP 452
MTRII QC FFSNNLKP S+S KHNFVVRCS SN+ S++ RN QRV +S+ NR
Sbjct: 1 MTRIILPH---QCPFFSNNLKPKSESSKHNFVVRCSISNEESRVNIRNPQRVKISSENRG 57
Query: 453 AHVQSNDMKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEK 632
+H DMKVLNWSCKVGKYDETLYLLECK+KSGYKPDVILCTKLIKGF NSKNSDK K
Sbjct: 58 SH----DMKVLNWSCKVGKYDETLYLLECKVKSGYKPDVILCTKLIKGFFNSKNSDKGVK 113
Query: 633 VMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCD 812
VMQILEQFGE DVFAYNAL+SGFCKMNKIE ANKVLNRMK GFPPDSVTYNILIGSLCD
Sbjct: 114 VMQILEQFGEPDVFAYNALVSGFCKMNKIEEANKVLNRMKTHGFPPDSVTYNILIGSLCD 173
Query: 813 RXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
R EE+NC PTVITYTILIEATILEGGIHEAMKLLDEMLS GLQPDM
Sbjct: 174 RGKLGSALMLLDQLKEEHNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSIGLQPDM 232
Score = 85.5 bits (210), Expect = 3e-14
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 2/199 (1%)
Frame = +3
Query: 396 SKIKHRNNQRVNVSTHNRPAHVQSNDMKVLNWSCKVGKYDETLYLLE-CKMKSGYKPDVI 572
+KI+ N + TH P + ++ ++ C GK L LL+ K + KP VI
Sbjct: 140 NKIEEANKVLNRMKTHGFPPDSVTYNI-LIGSLCDRGKLGSALMLLDQLKEEHNCKPTVI 198
Query: 573 LCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDVFAYNALISGFCKMNKIEAANKVLNRM 749
T LI+ +A K++ + G + D++ YNA+I G C+ ++ A + + +
Sbjct: 199 TYTILIEATILEGGIHEAMKLLDEMLSIGLQPDMYTYNAIIRGMCREKMMDQAYEFVRSL 258
Query: 750 KARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGG 929
++G PD ++YNIL+ +L C P V+TY+IL+ A +G
Sbjct: 259 PSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNEMLCAGCEPNVVTYSILMSALCRDGK 318
Query: 930 IHEAMKLLDEMLSRGLQPD 986
+ EA+ LL M+ +GL PD
Sbjct: 319 LDEAINLLKIMVDKGLTPD 337
Score = 85.5 bits (210), Expect = 3e-14
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET-DVFAY 680
GK+ + L+ + +G +P+V+ + L+ C D+A +++I+ G T D F Y
Sbjct: 282 GKWSDGEKLMNEMLCAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTY 341
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LIS FCK +++ A K L+ M G PD V YN ++ ++C +
Sbjct: 342 DPLISAFCKGGRLDMAIKFLDYMITNGCLPDIVNYNTILSTMC-KKGKADEAMEVFEKLA 400
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C P V TY L+ A GG A+K++ EM+ +G+ PD
Sbjct: 401 EIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPD 442
Score = 83.2 bits (204), Expect = 1e-13
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
CK G+ D + L+ + +G PD++ ++ C +D+A +V + L + G DV
Sbjct: 349 CKGGRLDMAIKFLDYMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDV 408
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN L+S A K+++ M +G PD +TYN LI LC R
Sbjct: 409 STYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLC-RDGMVNEALDLLG 467
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E N PTVITY IL+ + EA+++L EM+ +G +P+
Sbjct: 468 DMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGCRPN 512
Score = 82.8 bits (203), Expect = 2e-13
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK DE + LL+ + G PD LI FC D A K + + G D+
Sbjct: 314 CRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGRLDMAIKFLDYMITNGCLPDI 373
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN ++S CK K + A +V ++ G PPD TYN L+ +L +
Sbjct: 374 VNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSE 433
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQP 983
E+ +P ITY LI +G ++EA+ LL +M G P
Sbjct: 434 MIEK-GVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPP 476
Score = 80.1 bits (196), Expect = 1e-12
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEK-VMQILEQF 656
+L+ CK GK DE + + E + G PDV L+ N+ +A K V +++E+
Sbjct: 379 ILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKG 438
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
+ D YNALIS C+ + A +L M+ GFPP +TYNIL+ LC +
Sbjct: 439 VDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLC-KAHRVVEA 497
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKL 950
E C P TY +LIE G +AM++
Sbjct: 498 IEVLAEMVEKGCRPNETTYILLIEGIGFSGRRVQAMEM 535
Score = 66.2 bits (160), Expect = 2e-08
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNS-DKAEKVMQILEQF 656
++ C+ D+ + G KPDVI L++ + + EK+M +
Sbjct: 238 IIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNEMLCA 297
Query: 657 G-ETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXX 833
G E +V Y+ L+S C+ K++ A +L M +G PD+ TY+ LI + C +
Sbjct: 298 GCEPNVVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFC-KGGRLDM 356
Query: 834 XXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
N C P ++ Y ++ +G EAM++ +++ G PD+
Sbjct: 357 AIKFLDYMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDV 408
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 269 bits (688), Expect = 1e-69
Identities = 148/250 (59%), Positives = 177/250 (70%), Gaps = 7/250 (2%)
Frame = +3
Query: 261 NSTNQMTRIITAEIFPQCSFFSNNLKPTSQSQKHNFVVRCSS-NDHSKIKHRNNQRVNVS 437
N+ + MT I + + FP C FS LKPTS S H +V C + N + RN+ +V VS
Sbjct: 6 NAGSLMT-IYSTDFFPHCPPFSPQLKPTSHSH-HTSIVTCRNPNPNDGYNSRNSPKVGVS 63
Query: 438 THNRPAHVQSND------MKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGF 599
RPAH+QS D MK+LN SCK GK++E+LY LEC + GY PDVILCTKLIKGF
Sbjct: 64 AEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGF 123
Query: 600 CNSKNSDKAEKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSV 779
N KN +KA +VM+ILE E DVFAYNA+ISGFCK+N+IEAA +VLNRMKARGF PD V
Sbjct: 124 FNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIV 183
Query: 780 TYNILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDE 959
TYNI+IGSLC+R + NC PTVITYTILIEATI+EGGI+EAMKLL+E
Sbjct: 184 TYNIMIGSLCNRRKLGLALTVLDQLLLD-NCMPTVITYTILIEATIVEGGINEAMKLLEE 242
Query: 960 MLSRGLQPDM 989
ML+RGL PDM
Sbjct: 243 MLARGLLPDM 252
Score = 81.6 bits (200), Expect = 4e-13
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDVFAY 680
G +E + LLE + G PD+ +I+G C ++A +++ L G E DV +Y
Sbjct: 231 GGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISY 290
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
N L+ F K + K++ M +RG P+ VTY+ILI SLC R
Sbjct: 291 NILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLC-RFGRIDEAISVLKVMI 349
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
E P +Y LI A EG + A+ ++D M+S G PD+
Sbjct: 350 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392
Score = 73.6 bits (179), Expect = 1e-10
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
CK G+ D + +++ + +G PD++ ++ C + N+++A ++ L G +V
Sbjct: 368 CKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNV 427
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
+YN +IS A ++ M ++G PD +TYN LI LC R
Sbjct: 428 SSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLC-RDGLVEEAIGLLD 486
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E++ PTVI+Y I++ I +A+ + EM+ +G +P+
Sbjct: 487 DMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPN 531
Score = 71.2 bits (173), Expect = 6e-10
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQIL-EQFGETDVFAY 680
GK+DE L+ G +P+ + + LI C D+A V++++ E+ D ++Y
Sbjct: 301 GKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSY 360
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LIS CK +++ A +++ M + G PD V YN ++ +LC +
Sbjct: 361 DPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC-KNGNANQALEIFNKLR 419
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C P V +Y +I A G A+ ++ M+S+G+ PD
Sbjct: 420 GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPD 461
>emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 267 bits (683), Expect = 4e-69
Identities = 144/242 (59%), Positives = 172/242 (71%), Gaps = 7/242 (2%)
Frame = +3
Query: 285 IITAEIFPQCSFFSNNLKPTSQSQKHNFVVRCSS-NDHSKIKHRNNQRVNVSTHNRPAHV 461
I + + FP+C F+ LKPTS S H +V C + N + RN +V VS RPAH+
Sbjct: 3 IYSTDFFPRCPPFNPQLKPTSHSH-HTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHL 61
Query: 462 QSND------MKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDK 623
QS D MK+LN SCK GK++E+LY LEC + GY PDVILCTKLIKGF N KN +K
Sbjct: 62 QSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEK 121
Query: 624 AEKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGS 803
A +VM+ILE E DVFAYNA+ISGFCK+N+IEAA +VLNRMKARGF PD VTYNI+IGS
Sbjct: 122 ASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGS 181
Query: 804 LCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQP 983
LC+R + NC PTVITYTILIEATI+EGGI+EAMKLL+EML+RGL P
Sbjct: 182 LCNRRKLGLALKVLDQLLLD-NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 240
Query: 984 DM 989
DM
Sbjct: 241 DM 242
Score = 73.6 bits (179), Expect = 1e-10
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 36/206 (17%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKV-------- 635
V++ CKV + + +L G+ PD++ +I CN + A KV
Sbjct: 143 VISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDN 202
Query: 636 ------------------------MQILEQFGET----DVFAYNALISGFCKMNKIEAAN 731
M++LE+ D++ YNA+I G CK +
Sbjct: 203 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGE 262
Query: 732 KVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEA 911
K++ M +RG P+ VTY+ILI SLC R E P +Y LI A
Sbjct: 263 KLVAEMFSRGCEPNKVTYSILISSLC-RFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 321
Query: 912 TILEGGIHEAMKLLDEMLSRGLQPDM 989
EG + A+ ++D M+S G PD+
Sbjct: 322 LCKEGRLDLAIGIMDYMISNGCLPDI 347
Score = 60.8 bits (146), Expect = 8e-07
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQIL-EQF 656
++ CK G +DE L+ G +P+ + + LI C D+A V++++ E+
Sbjct: 248 IIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 307
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLC 809
D ++Y+ LIS CK +++ A +++ M + G PD V YN ++ +LC
Sbjct: 308 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 358
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 267 bits (683), Expect = 4e-69
Identities = 144/242 (59%), Positives = 172/242 (71%), Gaps = 7/242 (2%)
Frame = +3
Query: 285 IITAEIFPQCSFFSNNLKPTSQSQKHNFVVRCSS-NDHSKIKHRNNQRVNVSTHNRPAHV 461
I + + FP+C F+ LKPTS S H +V C + N + RN +V VS RPAH+
Sbjct: 3 IYSTDFFPRCPPFNPQLKPTSHSH-HTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHL 61
Query: 462 QSND------MKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDK 623
QS D MK+LN SCK GK++E+LY LEC + GY PDVILCTKLIKGF N KN +K
Sbjct: 62 QSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEK 121
Query: 624 AEKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGS 803
A +VM+ILE E DVFAYNA+ISGFCK+N+IEAA +VLNRMKARGF PD VTYNI+IGS
Sbjct: 122 ASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGS 181
Query: 804 LCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQP 983
LC+R + NC PTVITYTILIEATI+EGGI+EAMKLL+EML+RGL P
Sbjct: 182 LCNRRKLGLALKVLDQLLLD-NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 240
Query: 984 DM 989
DM
Sbjct: 241 DM 242
Score = 80.1 bits (196), Expect = 1e-12
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDVFAY 680
G +E + LLE + G PD+ +I+G C ++A +++ L G + DV +Y
Sbjct: 221 GGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISY 280
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
N L+ F K + K++ M +RG P+ VTY+ILI SLC R
Sbjct: 281 NILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLC-RFGRIDEAISVLKVMI 339
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
E P +Y LI A EG + A+ ++D M+S G PD+
Sbjct: 340 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 382
Score = 73.2 bits (178), Expect = 1e-10
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
CK G+ D + +++ + +G PD++ ++ C + N+++A ++ L G +V
Sbjct: 358 CKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNV 417
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
+YN +IS A ++ M ++G PD +TYN LI LC R
Sbjct: 418 SSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLC-RDGLVEEAIGLLD 476
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E++ PTVI+Y I++ I +A+ + EM+ +G +P+
Sbjct: 477 DMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPN 521
Score = 70.9 bits (172), Expect = 7e-10
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQIL-EQFGETDVFAY 680
GK+DE L+ G +P+ + + LI C D+A V++++ E+ D ++Y
Sbjct: 291 GKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSY 350
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LIS CK +++ A +++ M + G PD V YN ++ +LC +
Sbjct: 351 DPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC-KNGNANQALEIFNKLR 409
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C P V +Y +I A G A+ ++ M+S+G+ PD
Sbjct: 410 GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPD 451
>gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 586
Score = 260 bits (665), Expect = 5e-67
Identities = 136/247 (55%), Positives = 173/247 (70%), Gaps = 9/247 (3%)
Frame = +3
Query: 276 MTRIITAEIFPQCSFFSNNLKPTSQSQKHNF-VVRCSSNDH--SKIKHRNNQRVNVSTHN 446
MT T + F + LKPTS S H+ +V C +++ S K RNNQ+V VS
Sbjct: 1 MTLFSTELVTHSLPFTTQQLKPTSNSHSHHTSLVSCLNHESQDSSSKSRNNQKVRVSAET 60
Query: 447 RPAHVQSND------MKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNS 608
RP H+ S D MK+LN SCK GKY+E Y LEC + GYKPDV+LCTK+IKGF N
Sbjct: 61 RPTHLLSFDFKETHLMKLLNRSCKAGKYNEAFYFLECMVGKGYKPDVVLCTKMIKGFFNG 120
Query: 609 KNSDKAEKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYN 788
+N +KA +V++ILE++GE DVFAYNA+ISGFCKMN+++ ANKVL+RM++RGF PD VTYN
Sbjct: 121 RNVEKATRVIEILEKYGEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYN 180
Query: 789 ILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLS 968
I+IGS C R ++ NC P+VITYTILIEAT+L+G I+EAMKLLDEMLS
Sbjct: 181 IMIGSFCSRGKLDSAYKVINQLLKD-NCKPSVITYTILIEATMLQGEINEAMKLLDEMLS 239
Query: 969 RGLQPDM 989
+GL+PDM
Sbjct: 240 KGLRPDM 246
Score = 92.4 bits (228), Expect = 2e-16
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQFGETDV 671
C GK D ++ +K KP VI T LI+ ++A K++ ++L + D+
Sbjct: 187 CSRGKLDSAYKVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDM 246
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
F YNA+I G CK + A K + +KARG PD ++YNIL+ L ++
Sbjct: 247 FTYNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTE 306
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C P V+TY+ILI + EG + EA+ +L M RGL PD
Sbjct: 307 MV-SRGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPD 350
Score = 78.2 bits (191), Expect = 5e-12
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET-DVFAY 680
GK+ E L+ + G +P+V+ + LI C ++A V++++++ G T D ++Y
Sbjct: 295 GKWAEGEKLVTEMVSRGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSY 354
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LIS FCK +++ A + L+ M + G PD V YN ++ +LC +
Sbjct: 355 DPLISAFCKEGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLC-KNGKAEQALEIFEKLR 413
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C P V +Y + A G +A++++ EMLS+ + PD
Sbjct: 414 EVGCPPNVSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPD 455
Score = 69.7 bits (169), Expect = 2e-09
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEK-VMQILEQF 656
++ CK G + + G +PDVI L++ N + EK V +++ +
Sbjct: 252 IIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTEMVSRG 311
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
E +V Y+ LIS C+ K+E A VL MK RG PD+ +Y+ LI + C
Sbjct: 312 CEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGRLDLAI 371
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
+ C P ++ Y ++ G +A+++ +++ G P++
Sbjct: 372 EFLDCMISD-GCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPNV 421
Score = 67.8 bits (164), Expect = 6e-09
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
CK G+ D + L+C + G PD++ ++ C + +++A ++ + L + G +V
Sbjct: 362 CKEGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPNV 421
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
+YN + S A ++++ M ++ PD +TYN LI LC R
Sbjct: 422 SSYNTMFSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISCLC-RDGMVDEAIELLV 480
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+ PTVI+Y I++ I++A+++L M+ + QP+
Sbjct: 481 DMGCSGIPPTVISYNIVLLGLCKVHRINDAIEVLAAMVDKRCQPN 525
Score = 67.4 bits (163), Expect = 8e-09
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 1/164 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK +E + +L+ + G PD LI FC D A + + + G D+
Sbjct: 327 CREGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGRLDLAIEFLDCMISDGCLPDI 386
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN +++ CK K E A ++ +++ G PP+ +YN + +L
Sbjct: 387 VNYNTVLATLCKNGKAEQALEIFEKLREVGCPPNVSSYNTMFSALWSSGDKVKALEMISE 446
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQP 983
+ P ITY LI +G + EA++LL +M G+ P
Sbjct: 447 MLSK-RIGPDEITYNSLISCLCRDGMVDEAIELLVDMGCSGIPP 489
Score = 65.9 bits (159), Expect = 2e-08
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKA-EKVMQILEQF 656
VL CK GK ++ L + E + G P+V + +S + KA E + ++L +
Sbjct: 392 VLATLCKNGKAEQALEIFEKLREVGCPPNVSSYNTMFSALWSSGDKVKALEMISEMLSKR 451
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
D YN+LIS C+ ++ A ++L M G PP ++YNI++ LC +
Sbjct: 452 IGPDEITYNSLISCLCRDGMVDEAIELLVDMGCSGIPPTVISYNIVLLGLC-KVHRINDA 510
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEM 962
+ C P TY +LIE G EAM+L + +
Sbjct: 511 IEVLAAMVDKRCQPNETTYILLIEGIGFAGWRSEAMELANAL 552
>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 586
Score = 259 bits (663), Expect = 9e-67
Identities = 140/246 (56%), Positives = 172/246 (69%), Gaps = 11/246 (4%)
Frame = +3
Query: 285 IITAEIFPQCSFFSNNLKPTSQSQKHNFVVRCSSNDHSKIKH-----RNNQRVNVSTHNR 449
I++ E+ P ++ LKPTS S H + C ++ S I + RN RV+VS +
Sbjct: 3 IVSTELLPHSFHTTSQLKPTSHSH-HPTALSCRASSASSISNGRNSSRNPTRVSVSAEPK 61
Query: 450 PAHVQSND------MKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSK 611
+Q+ D MKVLN SCK G+Y+E +Y LE + GYKPDVILCTKLIKGF NS+
Sbjct: 62 STQLQNYDFKDTHLMKVLNRSCKAGQYNEAIYFLELMVNKGYKPDVILCTKLIKGFFNSR 121
Query: 612 NSDKAEKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNI 791
N +KA +VMQILEQ+GE D+FAYNALISGFCK N+IE+ANKVL+RMK++GF PD VTYNI
Sbjct: 122 NIEKAIRVMQILEQYGEPDLFAYNALISGFCKANRIESANKVLDRMKSQGFKPDVVTYNI 181
Query: 792 LIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSR 971
+IGSLC R + NC PTVITYTILIEA IL+GGI+EAMKLLDEMLSR
Sbjct: 182 MIGSLCSRGKLGLALQVMDRLVRD-NCKPTVITYTILIEAIILDGGINEAMKLLDEMLSR 240
Query: 972 GLQPDM 989
GL+PDM
Sbjct: 241 GLKPDM 246
Score = 79.0 bits (193), Expect = 3e-12
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQFGETDV 671
C GK L +++ ++ KP VI T LI+ ++A K++ ++L + + D+
Sbjct: 187 CSRGKLGLALQVMDRLVRDNCKPTVITYTILIEAIILDGGINEAMKLLDEMLSRGLKPDM 246
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
+ YNA++ G C+ ++ A + + A+G P+ ++YNIL+ +L +R
Sbjct: 247 YTYNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGKWEEGENLVAN 306
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C P V+TY+ILI +G + + M +L M +GL PD
Sbjct: 307 MC-ARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPD 350
Score = 76.6 bits (187), Expect = 1e-11
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
CK G+ D + LL+C + G PD++ ++ C + ++D+A ++ + L + G +V
Sbjct: 362 CKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEVGCPPNV 421
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
+YN + S A +++ M ++G PD +TYN LI LC R
Sbjct: 422 SSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLC-RDGMVNEAIGLLV 480
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E PTVITY I++ I +A+++ M+ +G +P+
Sbjct: 481 DMEAGGFQPTVITYNIVLLGLSKARRIVDAIEVFTAMVEKGCRPN 525
Score = 75.9 bits (185), Expect = 2e-11
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDVFAY 680
G +E + LL+ + G KPD+ +++G C D+A + ++ + G +V +Y
Sbjct: 225 GGINEAMKLLDEMLSRGLKPDMYTYNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISY 284
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
N L+ K E ++ M ARG P+ VTY+ILI +LC R +
Sbjct: 285 NILLRALLNRGKWEEGENLVANMCARGCEPNVVTYSILISTLC-RDGKVEDGMNVLKIMK 343
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
E P +Y LI EG + A++LLD M+S G PD+
Sbjct: 344 EKGLTPDAYSYDPLISCFCKEGRLDLAIELLDCMISDGCLPDI 386
Score = 74.3 bits (181), Expect = 7e-11
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET-DVFAY 680
GK++E L+ G +P+V+ + LI C + V++I+++ G T D ++Y
Sbjct: 295 GKWEEGENLVANMCARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSY 354
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LIS FCK +++ A ++L+ M + G PD V YN ++ +LC +
Sbjct: 355 DPLISCFCKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALC-KNGSADQALEIFENLG 413
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C P V +Y + A G A+ ++ +M+S+G++PD
Sbjct: 414 EVGCPPNVSSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPD 455
Score = 62.4 bits (150), Expect = 3e-07
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 1/164 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK ++ + +L+ + G PD LI FC D A +++ + G D+
Sbjct: 327 CRDGKVEDGMNVLKIMKEKGLTPDAYSYDPLISCFCKEGRLDLAIELLDCMISDGCLPDI 386
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN +++ CK + A ++ + G PP+ +YN + +L +
Sbjct: 387 VNYNTVLAALCKNGSADQALEIFENLGEVGCPPNVSSYNTMFSALWN-CGDRVRALGMVS 445
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQP 983
P ITY LI +G ++EA+ LL +M + G QP
Sbjct: 446 DMVSKGIEPDEITYNSLISCLCRDGMVNEAIGLLVDMEAGGFQP 489
>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 250 bits (638), Expect = 7e-64
Identities = 143/257 (55%), Positives = 172/257 (66%), Gaps = 9/257 (3%)
Frame = +3
Query: 243 STELLPNSTNQMTRIITAEIFPQCSFFSNNLKPTSQSQKHNFVVRC---SSNDHSKIKHR 413
STE LP+S SF + LKPTS S H+ +V C ND +K+ R
Sbjct: 5 STEFLPHSI---------------SFTTQPLKPTSNSL-HSTIVSCIRPELNDANKV--R 46
Query: 414 NNQRVNVSTHNRPAHVQSND------MKVLNWSCKVGKYDETLYLLECKMKSGYKPDVIL 575
N Q+V VS R HV S D MK+LN SC+ GKY+E+LY LEC + GY PDVIL
Sbjct: 47 NPQKVRVSAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVIL 106
Query: 576 CTKLIKGFCNSKNSDKAEKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKA 755
CTKLIKGF NS+N KA +VM+ILE++G+ DVFAYNALISGF K N++E AN+VL+RMK+
Sbjct: 107 CTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKS 166
Query: 756 RGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIH 935
RGF PD VTYNI+IGS C R ++ NC PTVITYTILIEATIL+GGI
Sbjct: 167 RGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKD-NCEPTVITYTILIEATILDGGID 225
Query: 936 EAMKLLDEMLSRGLQPD 986
AMKLLDEMLS+GL+PD
Sbjct: 226 VAMKLLDEMLSKGLEPD 242
Score = 90.1 bits (222), Expect = 1e-15
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQFGETDV 671
C GK D L + E +K +P VI T LI+ D A K++ ++L + E D
Sbjct: 184 CSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDT 243
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YNA+I G CK ++ A ++L + +RG PD +TYNIL+ +L R
Sbjct: 244 LTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISE 303
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C P V+T++ILI +G + EA+ LL M +GL+PD
Sbjct: 304 MI-SIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPD 347
Score = 78.6 bits (192), Expect = 4e-12
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDVFAY 680
GK+ E L+ + G KP+V+ + LI C ++A +++ +++ G + D + Y
Sbjct: 292 GKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCY 351
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LI+GFC+ +++ A + L M + G PD V YN ++ LC R +
Sbjct: 352 DPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLC-RTGKADQALEVFEKLD 410
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C P V +Y L A G + A++++ ++L++G+ PD
Sbjct: 411 EVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPD 452
Score = 75.9 bits (185), Expect = 2e-11
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK +E + LL + G KPD LI GFC D A + ++ + G D+
Sbjct: 324 CRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDI 383
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN +++G C+ K + A +V ++ G PP+ +YN L +L
Sbjct: 384 VNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILK 443
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
+ +P ITY LI +G + EA++LL +M S +P++
Sbjct: 444 LLNQ-GIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNV 488
Score = 67.4 bits (163), Expect = 8e-09
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKA-EKVMQILEQFGETDV 671
C+ GK D+ L + E + G P+V L +S + +A E ++++L Q + D
Sbjct: 394 CRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDE 453
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN+LIS C+ ++ A ++L M++ + P+ V+YNI++ LC +
Sbjct: 454 ITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC-KVNRANDAIEVLA 512
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEM 962
E C P TY +LIE G EAM+L + +
Sbjct: 513 AMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549
>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
gi|550316702|gb|ERP48891.1| hypothetical protein
POPTR_0019s03630g [Populus trichocarpa]
Length = 586
Score = 234 bits (597), Expect = 4e-59
Identities = 131/248 (52%), Positives = 163/248 (65%), Gaps = 11/248 (4%)
Frame = +3
Query: 276 MTRIITAEIFPQCSF--FSNNLKPTSQSQKHNFVVRCSSNDHSKIKHR--NNQRVN-VST 440
MT T I CSF S + K + S + N VV C + H+ N ++ V
Sbjct: 1 MTMFSTEFISHSCSFPFTSKHFKLSLHSLQSN-VVSCINPTHNDTNSNLGNPPKLRRVLP 59
Query: 441 HNRPAHVQSND------MKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFC 602
+P HV S D MK+LN SCK GK +E+LY LEC + GY+PDVI+CTKLIKGF
Sbjct: 60 ETKPTHVLSYDFKETHLMKLLNRSCKAGKCNESLYFLECMVAKGYQPDVIMCTKLIKGFF 119
Query: 603 NSKNSDKAEKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVT 782
NS+N +KA +VM+ILE+ GE DVFAYNA+ISGFCK N+IE+A KVL+RMK +GF D VT
Sbjct: 120 NSRNIEKATRVMEILEKHGEPDVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQDVVT 179
Query: 783 YNILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEM 962
YNI+IG+ C + ++NNC PT+ITYTILIEA ILEGGI E +KLLDEM
Sbjct: 180 YNIMIGTFCSKGKIDLALKVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLLDEM 239
Query: 963 LSRGLQPD 986
LSRGL+PD
Sbjct: 240 LSRGLEPD 247
Score = 84.7 bits (208), Expect = 5e-14
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMK-SGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQFGETD 668
C GK D L + E +K + KP +I T LI+ D+ K++ ++L + E D
Sbjct: 188 CSKGKIDLALKVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLLDEMLSRGLEPD 247
Query: 669 VFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXX 848
F YN ++ G K K+ A +++ + +RG PD +TYNIL+ +L D+
Sbjct: 248 TFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMD 307
Query: 849 XXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C P V+TY+ILI + +G I E++ L+ M +GL PD
Sbjct: 308 EMF-SRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPD 352
Score = 84.3 bits (207), Expect = 6e-14
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET-DVFAY 680
GK+ E L++ G +P+V+ + LI C +++ +++++++ G T D + Y
Sbjct: 297 GKWYEGEKLMDEMFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCY 356
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LI+ FC+ K++ A K L+ M + GF PD V YN ++ +LC + E
Sbjct: 357 DPLIAAFCREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALC-KNGNSDHAVEIFGKLE 415
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C P V +Y ++ A G + A+ ++ +MLS G+ PD
Sbjct: 416 EVGCPPNVSSYNTMLSALWGSGDRYRALGMISQMLSTGIDPD 457
Score = 73.9 bits (180), Expect = 9e-11
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK D + L+ + G+ PD++ ++ C + NSD A ++ LE+ G +V
Sbjct: 364 CREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGCPPNV 423
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
+YN ++S A ++++M + G PD +TYN LI LC R
Sbjct: 424 SSYNTMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLC-RDGMVDEAIGLLA 482
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
P +++Y I++ I +A+++L M+ G QP+
Sbjct: 483 DMLSGRFQPNIVSYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPN 527
Score = 69.3 bits (168), Expect = 2e-09
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK +E++ L++ + G PD LI FC D A K + + G D+
Sbjct: 329 CRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIKFLDYMISDGFLPDI 388
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN +++ CK + A ++ +++ G PP+ +YN ++ +L
Sbjct: 389 VNYNTIMAALCKNGNSDHAVEIFGKLEEVGCPPNVSSYNTMLSALWGSGDRYRALGMISQ 448
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
+P ITY LI +G + EA+ LL +MLS QP++
Sbjct: 449 ML-STGIDPDGITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNI 493
>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
Length = 587
Score = 231 bits (588), Expect = 4e-58
Identities = 125/247 (50%), Positives = 163/247 (65%), Gaps = 12/247 (4%)
Frame = +3
Query: 285 IITAEIFPQCSFFSNNLKPTSQSQKHNFVVRC-----SSNDHSKIKHRNNQRVNVSTHNR 449
II+ E PQ FS K + Q H + C SS D + K++ RV VS +
Sbjct: 3 IISTEFLPQTLPFSPQPKQHTSRQSHT-CLSCRNPSQSSTDIYRKKNKKPLRVRVSVETK 61
Query: 450 PAHVQSND-------MKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNS 608
+ QSN +KV+N SCK GKY+E LY LE + G+KPDVILCTK+++GF NS
Sbjct: 62 SPNSQSNSDFSESHLLKVINRSCKSGKYNEALYFLELMVSKGFKPDVILCTKVMRGFFNS 121
Query: 609 KNSDKAEKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYN 788
+N KA +VM+ILE+ GE D+F+YNA+ISGFCK N++E ANKVL+RM+ +GF PD++TYN
Sbjct: 122 RNIPKAIRVMEILEKHGEPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYN 181
Query: 789 ILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLS 968
I+IGSLC R + NC P+VITYTILIEATI EGG+ +AM++L+EMLS
Sbjct: 182 IMIGSLCSRGKVDMAFKVLDELLRD-NCKPSVITYTILIEATISEGGVDKAMEVLEEMLS 240
Query: 969 RGLQPDM 989
RGL PDM
Sbjct: 241 RGLLPDM 247
Score = 87.4 bits (215), Expect = 8e-15
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET-DV 671
C GK D +L+ ++ KP VI T LI+ + DKA +V++ + G D+
Sbjct: 188 CSRGKVDMAFKVLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDM 247
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
F YNA++ G C+ ++ A + + ++A+G P+ ++YNIL+ +L +R
Sbjct: 248 FTYNAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSD 307
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C P V+TY+ILI +G + +A+ +L M +G+ PD
Sbjct: 308 MV-SRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPD 351
Score = 75.1 bits (183), Expect = 4e-11
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET-DVFAY 680
GK+ + +L + G +P+V+ + LI C + A V++ +++ G T D ++Y
Sbjct: 296 GKWSDGEKILSDMVSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSY 355
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LIS FCK +++ A + ++ M + G PD V YN ++ +LC E
Sbjct: 356 DPLISAFCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGE 415
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C PTV +Y + A G +A++++ EM+S+ + PD
Sbjct: 416 VG-CPPTVSSYNTMFSALWNCGERIKALEMISEMVSKRINPD 456
Score = 65.5 bits (158), Expect = 3e-08
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 1/169 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG 659
++ C+ G D + G P+VI L++ N EK++ + G
Sbjct: 253 IVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDMVSRG 312
Query: 660 -ETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
E +V Y+ LIS C+ K+E A VL MK +G PD+ +Y+ LI + C
Sbjct: 313 CEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLDLAI 372
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQP 983
+ + P ++ Y ++ A G A+++ +++ G P
Sbjct: 373 EFMDYMISDGSL-PDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPP 420
Score = 65.1 bits (157), Expect = 4e-08
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 1/163 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET-DV 671
C+ GK ++ + +L+ + G PD LI FC D A + M + G D+
Sbjct: 328 CRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLDLAIEFMDYMISDGSLPDI 387
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN +++ CK + A ++ ++ G PP +YN + +L +
Sbjct: 388 VNYNTILAALCKNGNADHALEIFEKLGEVGCPPTVSSYNTMFSALWN-CGERIKALEMIS 446
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQ 980
NP ITY LI EG ++EA+ LL +M + G +
Sbjct: 447 EMVSKRINPDEITYNSLISCLCREGMVNEAIGLLIDMEAGGFK 489
Score = 59.3 bits (142), Expect = 2e-06
Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 36/188 (19%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG----- 659
CK G+ D + ++ + G PD++ ++ C + N+D A ++ + L + G
Sbjct: 363 CKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPPTV 422
Query: 660 -------------------------------ETDVFAYNALISGFCKMNKIEAANKVLNR 746
D YN+LIS C+ + A +L
Sbjct: 423 SSYNTMFSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCREGMVNEAIGLLID 482
Query: 747 MKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEG 926
M+A GF ++YNI++ LC + E C P TYT+LIE G
Sbjct: 483 MEAGGFKLSVISYNIVLLGLC-KARRIDDAIELLAAMVEKGCRPNETTYTLLIEGIGFAG 541
Query: 927 GIHEAMKL 950
EAM L
Sbjct: 542 WRVEAMGL 549
>ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 226 bits (575), Expect = 1e-56
Identities = 127/249 (51%), Positives = 152/249 (61%), Gaps = 15/249 (6%)
Frame = +3
Query: 288 ITAEIFPQCSFFSNNLKPTSQSQKHNFVVRCSS---NDHSKIKHRNNQRVNVSTHNRPA- 455
+++E C N K N V+ C N+ + K R N N H R
Sbjct: 4 VSSEFLSHCLPLGTNSKRAWLPNPSNTVITCRIPLLNEDNPSKRRLNNNNNNKGHTRVTS 63
Query: 456 --------HVQSND---MKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFC 602
H D MK LN CK GKY E LY LE +K GYKPDVILCTKLIKG
Sbjct: 64 SDTRPQQQHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLF 123
Query: 603 NSKNSDKAEKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVT 782
SK ++KA +VM+ILEQ+G+ D FAYNA+ISGFC+ ++ +AAN+V+ RMK RGF PD VT
Sbjct: 124 TSKRTEKAVRVMEILEQYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVT 183
Query: 783 YNILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEM 962
YNILIGSLC R E+ NCNPTVITYTILIEATI+ G I +AM+LLDEM
Sbjct: 184 YNILIGSLCARGKLDLALKVMDQLLED-NCNPTVITYTILIEATIIHGSIDDAMRLLDEM 242
Query: 963 LSRGLQPDM 989
+SRGLQPDM
Sbjct: 243 MSRGLQPDM 251
Score = 80.1 bits (196), Expect = 1e-12
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDVFAY 680
G+++ L+ + G +P+++ + LI C + +A V++++++ G D + Y
Sbjct: 297 GRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCY 356
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LIS FCK K++ A ++ M + G+ PD V YN ++GSLC + E
Sbjct: 357 DPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLC-KKGRADEALNIFKKLE 415
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C P +Y + A G A+ ++ EMLS G+ PD
Sbjct: 416 EVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPD 457
Score = 75.9 bits (185), Expect = 2e-11
Identities = 47/162 (29%), Positives = 77/162 (47%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGETDVFAYN 683
G D+ + LL+ M G +PD+ +++G C D+A + + L ++ YN
Sbjct: 230 GSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNL--YN 287
Query: 684 ALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXEE 863
L+ G + EA ++++ M +G P+ VTY++LI SLC R +E
Sbjct: 288 LLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLC-RDGKAGEAVDVLRVMKE 346
Query: 864 NNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
NP Y LI A EG + A+ +D+M+S G PD+
Sbjct: 347 KGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDI 388
Score = 71.6 bits (174), Expect = 4e-10
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
CK GK D + ++ + +G+ PD++ ++ C +D+A + + LE+ G +
Sbjct: 364 CKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNA 423
Query: 672 FAYNALISG-FCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXX 848
+YN + + +KI A +L M + G PD +TYN LI SLC R
Sbjct: 424 SSYNTMFGALWSSGDKIRALTMIL-EMLSNGVDPDRITYNSLISSLC-RDGMVDEAIGLL 481
Query: 849 XXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E PTVI+Y I++ I +A+++L M+ G QP+
Sbjct: 482 VDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPN 527
Score = 64.3 bits (155), Expect = 7e-08
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 1/164 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK E + +L + G PD LI FC D A + + G D+
Sbjct: 329 CRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDI 388
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN ++ CK + + A + +++ G PP++ +YN + G+L
Sbjct: 389 VNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILE 448
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQP 983
N +P ITY LI + +G + EA+ LL +M QP
Sbjct: 449 ML-SNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQP 491
>gb|ESW16008.1| hypothetical protein PHAVU_007G121900g [Phaseolus vulgaris]
Length = 570
Score = 221 bits (564), Expect = 3e-55
Identities = 129/240 (53%), Positives = 156/240 (65%), Gaps = 16/240 (6%)
Frame = +3
Query: 318 FFSNNLKPTSQSQ-----KHNFVVRCSS---NDHSKIKHRNNQ-----RVNVSTHNRPAH 458
F S+ L + S+ K N V+ C N+ + K +NN RV+ S+ RP H
Sbjct: 8 FLSHTLSLRTNSKGAWHPKPNTVITCRIPVLNEDNPSKRKNNYNKGNGRVS-SSDTRPRH 66
Query: 459 VQSND---MKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAE 629
D M+ LN C+ GKY E LY LE +K GYKPDVILCTKLIKG SK ++KA
Sbjct: 67 YDFRDTHHMRALNRLCRTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKKTEKAV 126
Query: 630 KVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLC 809
+VM+ILEQ G+ D FAYNA+ISGFC+ ++ +AAN VL RMK RGF PD VTYNILIGSLC
Sbjct: 127 QVMEILEQHGDPDAFAYNAVISGFCRSDRFDAANGVLLRMKNRGFSPDVVTYNILIGSLC 186
Query: 810 DRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
R ++ NCNPTVITYTILIEATI+ G I +AMKLLDEM+SRGLQPDM
Sbjct: 187 ARGKLDLAMKVMDQLMKD-NCNPTVITYTILIEATIIHGVIDKAMKLLDEMVSRGLQPDM 245
Score = 82.0 bits (201), Expect = 3e-13
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG 659
VL G++ L+ M G +P+V+ + LI C + +A +++++++ G
Sbjct: 283 VLKGLLNEGRWKTGERLMSDMMVKGCEPNVVTYSVLINSLCRDGKTGEAVDLLKVMKEKG 342
Query: 660 -ETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
D + Y+ LIS FCK K++ A ++ M + G+ PD + YN ++GSLC +
Sbjct: 343 LSPDAYCYDPLISAFCKEGKVDLAIGFVDDMVSAGWLPDIINYNTIMGSLC-KKGRGDEA 401
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+E C P V +Y ++ A G A++++ EML+ GL PD
Sbjct: 402 LSIFKKLDEVGCPPNVSSYNTMLGALWSSGDKIRALRMVLEMLNNGLDPD 451
Score = 70.9 bits (172), Expect = 7e-10
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
CK GK D + ++ + +G+ PD+I ++ C D+A + + L++ G +V
Sbjct: 358 CKEGKVDLAIGFVDDMVSAGWLPDIINYNTIMGSLCKKGRGDEALSIFKKLDEVGCPPNV 417
Query: 672 FAYNALISGFCKM-NKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXX 848
+YN ++ +KI A VL + G PD +TYN LI LC R
Sbjct: 418 SSYNTMLGALWSSGDKIRALRMVLEMLN-NGLDPDRITYNSLISCLC-RDGMVDEAIGLL 475
Query: 849 XXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E + PTVI+Y I++ I +A+++L M+ G QP+
Sbjct: 476 VDMERSEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPN 521
Score = 66.6 bits (161), Expect = 1e-08
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 33/198 (16%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C GK D + +++ MK P VI T LI+ DKA K++ + G + D+
Sbjct: 186 CARGKLDLAMKVMDQLMKDNCNPTVITYTILIEATIIHGVIDKAMKLLDEMVSRGLQPDM 245
Query: 672 FAYNALISGFCKMNKIEAA--------------------------------NKVLNRMKA 755
+ YN ++ G CK ++ A ++++ M
Sbjct: 246 YTYNVIVRGMCKRGLVDRAFEFVCNLSTTPSLNLYNLVLKGLLNEGRWKTGERLMSDMMV 305
Query: 756 RGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIH 935
+G P+ VTY++LI SLC R +E +P Y LI A EG +
Sbjct: 306 KGCEPNVVTYSVLINSLC-RDGKTGEAVDLLKVMKEKGLSPDAYCYDPLISAFCKEGKVD 364
Query: 936 EAMKLLDEMLSRGLQPDM 989
A+ +D+M+S G PD+
Sbjct: 365 LAIGFVDDMVSAGWLPDI 382
Score = 59.7 bits (143), Expect = 2e-06
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEK-VMQILEQFGETDV 671
CK G+ DE L + + + G P+V ++ +S + +A + V+++L + D
Sbjct: 393 CKKGRGDEALSIFKKLDEVGCPPNVSSYNTMLGALWSSGDKIRALRMVLEMLNNGLDPDR 452
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN+LIS C+ ++ A +L M+ + P ++YNI++ LC +
Sbjct: 453 ITYNSLISCLCRDGMVDEAIGLLVDMERSEWQPTVISYNIVLLGLC-KAHRIVDAIEVLA 511
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLS 968
+N C P TYT+L+E G +A++L + S
Sbjct: 512 VMVDNGCQPNQTTYTLLVEGISYAGWPSDAVELAKSLSS 550
>ref|XP_006589209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 561
Score = 221 bits (563), Expect = 3e-55
Identities = 120/234 (51%), Positives = 147/234 (62%)
Frame = +3
Query: 288 ITAEIFPQCSFFSNNLKPTSQSQKHNFVVRCSSNDHSKIKHRNNQRVNVSTHNRPAHVQS 467
++ E F NLK N V+ CS+ + H + H +
Sbjct: 4 VSTEFLSHTLPFQTNLKHAWHPNPTNTVITCSNRRLNNKGHTKVTSSDTRPHQHYDFRDT 63
Query: 468 NDMKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQIL 647
N +K LN CK GK E LY LE + +GYKPDVILCTKLIK SK ++KA +VM+IL
Sbjct: 64 NHIKSLNRLCKTGKCTEALYFLEQMVMNGYKPDVILCTKLIKCLFTSKRTEKAVRVMEIL 123
Query: 648 EQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXX 827
EQ+GE D FAYNA+ISGFC+ ++ +AAN V+ RMK RGF PD VTYNILIGSLC R
Sbjct: 124 EQYGEPDSFAYNAVISGFCRSDRFDAANGVILRMKNRGFSPDVVTYNILIGSLCARGNLD 183
Query: 828 XXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
E+ NCNPT+ITYTILIEATI+ GGI EAM+LLDEM+SRGLQPD+
Sbjct: 184 LALKVMDQLLED-NCNPTLITYTILIEATIIHGGIDEAMRLLDEMMSRGLQPDI 236
Score = 80.1 bits (196), Expect = 1e-12
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDVFAY 680
G+++ L+ + G +P+V+ + LI C + +A V++++++ G D + Y
Sbjct: 282 GRWEAGERLMSDMIVKGCEPNVVTYSVLISSLCRDGKAGEAVDVLRVMKERGLNPDAYCY 341
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LIS FCK K++ A ++ M + G+ PD V YN ++GSLC + E
Sbjct: 342 DPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLC-KKGRADEALNIFKKLE 400
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C P +Y + A G A+ ++ EMLS G+ PD
Sbjct: 401 EVGCPPNASSYNTMFGALWSSGDKIRALGMILEMLSNGVDPD 442
Score = 76.3 bits (186), Expect = 2e-11
Identities = 48/162 (29%), Positives = 77/162 (47%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGETDVFAYN 683
G DE + LL+ M G +PD+ +++G C D+A + + L ++ YN
Sbjct: 215 GGIDEAMRLLDEMMSRGLQPDIYTYNVIVRGMCKRGLVDRAFEFVSNLSITPSLNL--YN 272
Query: 684 ALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXEE 863
L+ G + EA ++++ M +G P+ VTY++LI SLC R +E
Sbjct: 273 LLLKGLLNEGRWEAGERLMSDMIVKGCEPNVVTYSVLISSLC-RDGKAGEAVDVLRVMKE 331
Query: 864 NNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
NP Y LI A EG + A+ +D+M+S G PD+
Sbjct: 332 RGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDI 373
Score = 72.0 bits (175), Expect = 3e-10
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
CK GK D + ++ + +G+ PD++ ++ C +D+A + + LE+ G +
Sbjct: 349 CKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNA 408
Query: 672 FAYNALISG-FCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXX 848
+YN + + +KI A +L M + G PD +TYN LI SLC R
Sbjct: 409 SSYNTMFGALWSSGDKIRALGMIL-EMLSNGVDPDRITYNSLISSLC-RDGMVDEAIGLL 466
Query: 849 XXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E + PTVI+Y I++ I +A+++L M+ G QP+
Sbjct: 467 VDMERSEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPN 512
Score = 63.9 bits (154), Expect = 9e-08
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 1/164 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK E + +L + G PD LI FC D A + + G D+
Sbjct: 314 CRDGKAGEAVDVLRVMKERGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDI 373
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN ++ CK + + A + +++ G PP++ +YN + G+L
Sbjct: 374 VNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALGMILE 433
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQP 983
N +P ITY LI + +G + EA+ LL +M QP
Sbjct: 434 ML-SNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERSEWQP 476
>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 590
Score = 221 bits (563), Expect = 3e-55
Identities = 125/233 (53%), Positives = 153/233 (65%), Gaps = 18/233 (7%)
Frame = +3
Query: 342 TSQSQKHNFVVRCSS--------NDHSKIKHRNN----QRVNVSTHNRPAHVQSND---- 473
TS K N ++ SS N+++K + R N Q+ V+ H Q D
Sbjct: 19 TSSHSKPNTIIITSSILFLNEANNNNNKRRRRTNNNEQQQFRVNETKPTKHDQDYDFRDT 78
Query: 474 --MKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQIL 647
MK LN SCK KYDE+LY L+ + GYKPDVILCTKLIKGF N K +KA +VM+IL
Sbjct: 79 NFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEIL 138
Query: 648 EQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXX 827
E+ G+ DVFAYNA+ISGFCK ++++ A+KVL+RMK RGF PD VTYNILIG+ C R
Sbjct: 139 EKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLD 198
Query: 828 XXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
++ NC PTVITYTILIEATI +GGI EAMKLLDEMLSRGL+PD
Sbjct: 199 LALRVMDQLLKD-NCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPD 250
Score = 73.6 bits (179), Expect = 1e-10
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK D + L+ + G+ PD++ ++ C + N+D+A + + L + G +
Sbjct: 367 CREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNA 426
Query: 672 FAYNALISGFCKM-NKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXX 848
+YN L +KI A +L M + G PD +TYN LI LC
Sbjct: 427 GSYNTLFGALWSSGDKIRALGMILE-MLSNGIDPDEITYNSLISCLCRDGLVDQAIELLV 485
Query: 849 XXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C PTVI+Y ++ I +A+++L M++ G P+
Sbjct: 486 DMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPN 531
Score = 71.2 bits (173), Expect = 6e-10
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDVFAY 680
GK++ L+ + G +P+ I + LI C D+A+ V++++++ D ++Y
Sbjct: 300 GKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSY 359
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
+ LIS C+ K++ A + L+ M + G PD ++YN ++ SLC E
Sbjct: 360 DPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGE 419
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C P +Y L A G A+ ++ EMLS G+ PD
Sbjct: 420 VG-CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPD 460
Score = 67.8 bits (164), Expect = 6e-09
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDVFAY 680
G DE + LL+ + G +PD ++ G C D+A + + + + G V Y
Sbjct: 230 GGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTY 289
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
N L+ K E K+++ M +G P+ +TY+ LI +LC R +
Sbjct: 290 NILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALC-RDGKIDEAKNVLKVMK 348
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
E P +Y LI A EG + A++ LD+M+S G PD+
Sbjct: 349 EKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDI 391
Score = 62.4 bits (150), Expect = 3e-07
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET-DV 671
C+ GK DE +L+ + PD LI C D A + + + G D+
Sbjct: 332 CRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDI 391
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
+YN++++ CK + A + ++ G PP++ +YN L G+L
Sbjct: 392 LSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILE 451
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEML-SRGLQP 983
N +P ITY LI +G + +A++LL +M S QP
Sbjct: 452 ML-SNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQP 495
Score = 61.2 bits (147), Expect = 6e-07
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQ-ILEQF 656
V+N CK G D L K+G V L++ N + EK+M +L +
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
E + Y+ LI+ C+ KI+ A VL MK + PD +Y+ LI +LC R
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALC-REGKVDLA 375
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
P +++Y ++ + G EA+ + +++ G P+
Sbjct: 376 IEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPN 425
>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 219 bits (559), Expect = 1e-54
Identities = 115/241 (47%), Positives = 164/241 (68%), Gaps = 6/241 (2%)
Frame = +3
Query: 285 IITAEIFPQCSFFSNNL-KPTSQSQKHNFVVRCSSNDHSKIKHRNNQRVNVSTH-----N 446
+ ++E PQ F+N L KPT + + + C ++ + +++ + H N
Sbjct: 1 MFSSEFLPQSLHFTNPLAKPTIPQSRSDSIPACRFSNKTHLRNVTSSAEFRQPHFPNLDN 60
Query: 447 RPAHVQSNDMKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKA 626
R AH+ MK+LN SC+ GK++E+LY LE + G+KPDV+LCTKLIKGF NS+N KA
Sbjct: 61 RDAHL----MKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKA 116
Query: 627 EKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSL 806
+VM+ILE +G+ DV++YNA+ISGF K N+I++AN+V +RM++RGF PD VTYNI+IGSL
Sbjct: 117 MRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSL 176
Query: 807 CDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C R ++ C P+VITYTILIEATILEG I+EA++L DE++SRGL+PD
Sbjct: 177 CSRGKLELAFEVMDELLKD-GCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPD 235
Query: 987 M 989
+
Sbjct: 236 L 236
Score = 82.8 bits (203), Expect = 2e-13
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C GK + +++ +K G KP VI T LI+ ++A ++ L G D+
Sbjct: 177 CSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDL 236
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
+ YNA+I G CK + A + + ARG PD V+YNIL+ S ++
Sbjct: 237 YTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKD 296
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+ C P V+T++ILI + EG + EA+ +L+ M +GL PD
Sbjct: 297 MV-LSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPD 340
Score = 82.8 bits (203), Expect = 2e-13
Identities = 46/161 (28%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Frame = +3
Query: 507 KYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET-DVFAYN 683
++++ L++ + SG +P+V+ + LI FC +A V++++++ G T D ++Y+
Sbjct: 286 RWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYD 345
Query: 684 ALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXEE 863
LIS FCK +++ A + L +M + G PD V YN ++ +LC + +E
Sbjct: 346 PLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLC-KFGCADLALDVFEKLDE 404
Query: 864 NNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
C PTV Y + A G +A++++ EM+ +G+ PD
Sbjct: 405 VGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPD 445
Score = 67.8 bits (164), Expect = 6e-09
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
CK G+ D + LE + G PD++ ++ C +D A V + L++ G V
Sbjct: 352 CKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTV 411
Query: 672 FAYNALISGFCKM-NKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXX 848
AYN + S NKI+A ++++ M +G PD +TYN LI LC R
Sbjct: 412 RAYNTMFSALWSCGNKIKAL-EMISEMIRKGIDPDEITYNSLISCLC-RDGLVDEAIGLL 469
Query: 849 XXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E PTVI++ I++ + E ++LL M+ +G P+
Sbjct: 470 VDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPN 515
>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
gi|482565317|gb|EOA29506.1| hypothetical protein
CARUB_v10013258mg [Capsella rubella]
Length = 607
Score = 218 bits (556), Expect = 2e-54
Identities = 117/231 (50%), Positives = 156/231 (67%), Gaps = 9/231 (3%)
Frame = +3
Query: 324 SNNLKPTSQSQKHNFVVRCSSNDHSK-IKHRNNQRVNVSTHNRPAHVQSNDM-------- 476
S+ L ++ + H+ V SS+ ++ ++ Q V T R S+ +
Sbjct: 38 SSLLSFSNSNPNHDNVKSFSSSGAARNLQAATTQDATVPTERRQHQTHSHSLGFRDTQML 97
Query: 477 KVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQF 656
K+ + SC+ G Y E+L+LLE ++ GY PDVILCTKLIKGF +N KA +VM+ILE+F
Sbjct: 98 KIFHRSCRSGNYIESLHLLESMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 157
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
G+ DVFAYNALI+GFCKMN+I+ A +VL+RM+++GF PD+VTYNI+IGSLC R
Sbjct: 158 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKGFSPDTVTYNIMIGSLCSRGKLVLAL 217
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
+ NC PTVITYTILIEAT+LEGG+ EA+KLLDEMLSRGL+PDM
Sbjct: 218 KVLDQLLSD-NCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDM 267
Score = 87.8 bits (216), Expect = 6e-15
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQFGETDV 671
C GK L +L+ + +P VI T LI+ D+A K++ ++L + + D+
Sbjct: 208 CSRGKLVLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDM 267
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
F YN +I G CK ++ A +++ ++ RG PD ++YNIL+ +L ++
Sbjct: 268 FTYNTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTK 327
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C+P V+TY+ILI +G I EA+ LL M +GL PD
Sbjct: 328 MFSE-KCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPD 371
Score = 67.8 bits (164), Expect = 6e-09
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQF 656
++ CK G D ++ G +PDVI L++ N ++ EK+M ++ +
Sbjct: 273 IIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 332
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
+ +V Y+ LI+ C+ KIE A +L MK +G PD+ +Y+ LI + C R
Sbjct: 333 CDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFC-REGRLDLA 391
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+ C P ++ Y ++ G +A+++ ++ G P+
Sbjct: 392 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 441
Score = 65.9 bits (159), Expect = 2e-08
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK +E L LL+ + G PD LI FC D A + ++ + G D+
Sbjct: 348 CRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDLAIEFLETMISDGCLPDI 407
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN +++ CK K + A ++ ++ G P+S +YN + +L
Sbjct: 408 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMISE 467
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
+ +P ITY +I EG + EA LL +M S P +
Sbjct: 468 MVSQ-GIDPDEITYNSMISCLCREGMVDEAFDLLVDMRSCEFHPSV 512
Score = 65.1 bits (157), Expect = 4e-08
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ G+ D + LE + G PD++ ++ C + +D+A ++ L + G +
Sbjct: 383 CREGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 442
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
+YN + S A +++ M ++G PD +TYN +I LC R
Sbjct: 443 SSYNTMFSALWSSGDKIRALHMISEMVSQGIDPDEITYNSMISCLC-REGMVDEAFDLLV 501
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+P+V+TY I++ I +A+ +L+ M+ G +P+
Sbjct: 502 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLESMVGNGCRPN 546
Score = 61.2 bits (147), Expect = 6e-07
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKA-EKVMQILEQF 656
VL CK GK D+ L + + G P+ + +S + +A + +++ Q
Sbjct: 413 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVSQG 472
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
+ D YN++IS C+ ++ A +L M++ F P VTYNI++ C +
Sbjct: 473 IDPDEITYNSMISCLCREGMVDEAFDLLVDMRSCEFHPSVVTYNIVLLGFC-KAHRIEDA 531
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEML 965
N C P TYT+LIE G EAM+L ++++
Sbjct: 532 IDVLESMVGNGCRPNESTYTVLIEGIGFAGYRAEAMELANDLV 574
>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Citrus sinensis]
Length = 583
Score = 218 bits (554), Expect = 4e-54
Identities = 121/228 (53%), Positives = 155/228 (67%), Gaps = 9/228 (3%)
Frame = +3
Query: 333 LKPTSQSQKHNFVVRCSSNDHSKIKHRNNQRVNVST--HNRP-AHVQSND------MKVL 485
LKPT+ + VV C I ++N+RV VS+ RP H+ S D MK++
Sbjct: 24 LKPTTSHSVQSTVVSC-------INPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLI 76
Query: 486 NWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET 665
S + GK+DE+LY +E + +G KPDV++CTKLIK F + S+KA +VM+ILE++GE
Sbjct: 77 KKSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEP 136
Query: 666 DVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXX 845
DVFAYNALISGFCK N+IE ANKVL+R+++RGF PD VTYNI+IGSLC R
Sbjct: 137 DVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVF 196
Query: 846 XXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
+ NC PTVITYTILI+AT+LEG +AMKLLDEML+RGL PDM
Sbjct: 197 DQLLRD-NCKPTVITYTILIQATMLEGQTDKAMKLLDEMLARGLIPDM 243
Score = 81.6 bits (200), Expect = 4e-13
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Frame = +3
Query: 504 GKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDVFAY 680
G+ D+ + LL+ + G PD+ +I+G C +A + ++ LE G + DV +Y
Sbjct: 222 GQTDKAMKLLDEMLARGLIPDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISY 281
Query: 681 NALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXE 860
N L+ M K E K++ M +RG P+ VTY+ILI SLC R +
Sbjct: 282 NMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLC-RDGKTEDAVDVLRAAK 340
Query: 861 ENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
E P +Y LI A +G + A++ LD M+S G PD+
Sbjct: 341 EKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDI 383
Score = 78.6 bits (192), Expect = 4e-12
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +3
Query: 501 VGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGET-DVFA 677
+GK++E L+ + G +P+V+ + LI C ++ A V++ ++ G T D ++
Sbjct: 291 MGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYS 350
Query: 678 YNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXX 857
Y+ LIS +CK +++ A + L+ M + G PD V YN ++ + C +
Sbjct: 351 YDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFC-KNGNADQALEIFEKL 409
Query: 858 EENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+ C P V +Y + A G A+ ++ EMLS+G++PD
Sbjct: 410 SDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPD 452
Score = 78.2 bits (191), Expect = 5e-12
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
CK G+ D + L+ + G PD++ ++ FC + N+D+A ++ + L G +V
Sbjct: 359 CKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 418
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
+YN + S A +++ M ++G PD +TYN LI LC R
Sbjct: 419 SSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLC-RDGMVDEAVGLLV 477
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E PTVI+Y I+I I+E++++L M +G +P+
Sbjct: 478 DMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 522
Score = 69.3 bits (168), Expect = 2e-09
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQF 656
++ CK G + + G +PDVI L++ N ++ EK+M +++ +
Sbjct: 249 IIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 308
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
E +V Y+ LIS C+ K E A VL K +G PD+ +Y+ LI + C +
Sbjct: 309 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYC-KDGRLDLA 367
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
+ C P ++ Y ++ A G +A+++ +++ G P++
Sbjct: 368 IEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNV 418
>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330308|gb|EFH60727.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 216 bits (549), Expect = 1e-53
Identities = 110/192 (57%), Positives = 139/192 (72%), Gaps = 6/192 (3%)
Frame = +3
Query: 432 VSTHNRPAHVQS------NDMKVLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIK 593
+ T R H QS +K+ + SC+ G Y E+L+LLE ++ GY PDVILCTKLIK
Sbjct: 69 IPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIK 128
Query: 594 GFCNSKNSDKAEKVMQILEQFGETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPD 773
GF +N KA +VM+ILE+FG+ DVFAYNALI+GFCKMN+I+ A +VL+RM+++ F PD
Sbjct: 129 GFFTLRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPD 188
Query: 774 SVTYNILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLL 953
+VTYNI+IGSLC R + NC PTVITYTILIEAT+LEGG+ EA+KLL
Sbjct: 189 TVTYNIMIGSLCSRGKLDLALKVLDQLLSD-NCQPTVITYTILIEATMLEGGVDEALKLL 247
Query: 954 DEMLSRGLQPDM 989
DEMLSRGL+PDM
Sbjct: 248 DEMLSRGLKPDM 259
Score = 91.3 bits (225), Expect = 5e-16
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQFGETDV 671
C GK D L +L+ + +P VI T LI+ D+A K++ ++L + + D+
Sbjct: 200 CSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDM 259
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
F YN +I G CK ++ A +++ ++ +G PD ++YNIL+ +L ++
Sbjct: 260 FTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 319
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C+P V+TY+ILI +G I EAM LL M +GL PD
Sbjct: 320 MFSE-KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 363
Score = 68.9 bits (167), Expect = 3e-09
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQF 656
++ CK G D ++ G +PDVI L++ N ++ EK+M ++ +
Sbjct: 265 IIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 324
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
+ +V Y+ LI+ C+ KIE A +L MK +G PD+ +Y+ LI + C R
Sbjct: 325 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC-REGRLDVA 383
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+ C P ++ Y ++ G +A+++ ++ G P+
Sbjct: 384 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 433
Score = 66.6 bits (161), Expect = 1e-08
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ G+ D + LE + G PD++ ++ C + +D+A ++ L + G +
Sbjct: 375 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 434
Query: 672 FAYNALISGFCKM-NKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXX 848
+YN + S +KI A + +L M + G PD +TYN +I LC R
Sbjct: 435 SSYNTMFSALWSSGDKIRALHMILE-MVSNGIDPDEITYNSMISCLC-REGMVDKAFELL 492
Query: 849 XXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+P+V+TY I++ I +A+ +LD M+ G +P+
Sbjct: 493 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPN 538
Score = 65.5 bits (158), Expect = 3e-08
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK +E + LL+ + G PD LI FC D A + ++ + G D+
Sbjct: 340 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 399
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN +++ CK K + A ++ ++ G P+S +YN + +L
Sbjct: 400 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
N +P ITY +I EG + +A +LL +M S P +
Sbjct: 460 MV-SNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSV 504
Score = 62.4 bits (150), Expect = 3e-07
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG 659
VL CK GK D+ L + + G P+ + +S DK + ILE
Sbjct: 405 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS--GDKIRALHMILEMVS 462
Query: 660 ---ETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXX 830
+ D YN++IS C+ ++ A ++L M++ F P VTYNI++ C +
Sbjct: 463 NGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFC-KAHRIE 521
Query: 831 XXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEML 965
N C P TYT+LIE G EAM+L ++++
Sbjct: 522 DAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566
>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 215 bits (547), Expect = 2e-53
Identities = 111/209 (53%), Positives = 144/209 (68%), Gaps = 6/209 (2%)
Frame = +3
Query: 381 SSNDHSKIKHRNNQRVNVSTHNRPAHVQS------NDMKVLNWSCKVGKYDETLYLLECK 542
SS+ ++ + T R H QS +K+ + SC+ G Y E+L+LLE
Sbjct: 56 SSSGARNLQTTTTTDATLPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETM 115
Query: 543 MKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGETDVFAYNALISGFCKMNKIE 722
++ GY PDVILCTKLIKGF +N KA +VM+ILE+FG+ DVFAYNALI+GFCKMN+I+
Sbjct: 116 VRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRID 175
Query: 723 AANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTIL 902
A +VL+RM+++ F PD+VTYNI+IGSLC R + NC PTVITYTIL
Sbjct: 176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD-NCQPTVITYTIL 234
Query: 903 IEATILEGGIHEAMKLLDEMLSRGLQPDM 989
IEAT+LEGG+ EA+KL+DEMLSRGL+PDM
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDM 263
Score = 91.3 bits (225), Expect = 5e-16
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQFGETDV 671
C GK D L +L + +P VI T LI+ D+A K+M ++L + + D+
Sbjct: 204 CSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDM 263
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
F YN +I G CK ++ A +++ ++ +G PD ++YNIL+ +L ++
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C+P V+TY+ILI +G I EAM LL M +GL PD
Sbjct: 324 MFSE-KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Score = 68.6 bits (166), Expect = 4e-09
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQF 656
++ CK G D ++ G +PDVI L++ N ++ EK+M ++ +
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
+ +V Y+ LI+ C+ KIE A +L MK +G PD+ +Y+ LI + C R
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC-REGRLDVA 387
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+ C P ++ Y ++ G +A+++ ++ G P+
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Score = 67.0 bits (162), Expect = 1e-08
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK +E + LL+ + G PD LI FC D A + ++ + G D+
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN +++ CK K + A ++ ++ G P+S +YN + +L
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
N +P ITY +I EG + EA +LL +M S P +
Sbjct: 464 MM-SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Score = 65.9 bits (159), Expect = 2e-08
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ G+ D + LE + G PD++ ++ C + +D+A ++ L + G +
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 672 FAYNALISGFCKM-NKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXX 848
+YN + S +KI A + +L M + G PD +TYN +I LC R
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMM-SNGIDPDEITYNSMISCLC-REGMVDEAFELL 496
Query: 849 XXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+P+V+TY I++ I +A+ +L+ M+ G +P+
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542
Score = 62.8 bits (151), Expect = 2e-07
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG 659
VL CK GK D+ L + + G P+ + +S DK + ILE
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS--GDKIRALHMILEMMS 466
Query: 660 ---ETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXX 830
+ D YN++IS C+ ++ A ++L M++ F P VTYNI++ C +
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC-KAHRIE 525
Query: 831 XXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEML 965
N C P TYT+LIE G EAM+L ++++
Sbjct: 526 DAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical
protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis
thaliana] gi|22136960|gb|AAM91709.1| unknown protein
[Arabidopsis thaliana] gi|332640611|gb|AEE74132.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 602
Score = 215 bits (547), Expect = 2e-53
Identities = 111/209 (53%), Positives = 144/209 (68%), Gaps = 6/209 (2%)
Frame = +3
Query: 381 SSNDHSKIKHRNNQRVNVSTHNRPAHVQS------NDMKVLNWSCKVGKYDETLYLLECK 542
SS+ ++ + T R H QS +K+ + SC+ G Y E+L+LLE
Sbjct: 56 SSSGARNLQTTTTTDATLPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETM 115
Query: 543 MKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFGETDVFAYNALISGFCKMNKIE 722
++ GY PDVILCTKLIKGF +N KA +VM+ILE+FG+ DVFAYNALI+GFCKMN+I+
Sbjct: 116 VRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRID 175
Query: 723 AANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXXXXEENNCNPTVITYTIL 902
A +VL+RM+++ F PD+VTYNI+IGSLC R + NC PTVITYTIL
Sbjct: 176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD-NCQPTVITYTIL 234
Query: 903 IEATILEGGIHEAMKLLDEMLSRGLQPDM 989
IEAT+LEGG+ EA+KL+DEMLSRGL+PDM
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDM 263
Score = 91.3 bits (225), Expect = 5e-16
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQFGETDV 671
C GK D L +L + +P VI T LI+ D+A K+M ++L + + D+
Sbjct: 204 CSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDM 263
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
F YN +I G CK ++ A +++ ++ +G PD ++YNIL+ +L ++
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
E C+P V+TY+ILI +G I EAM LL M +GL PD
Sbjct: 324 MFSE-KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Score = 68.6 bits (166), Expect = 4e-09
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVM-QILEQF 656
++ CK G D ++ G +PDVI L++ N ++ EK+M ++ +
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 657 GETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXX 836
+ +V Y+ LI+ C+ KIE A +L MK +G PD+ +Y+ LI + C R
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC-REGRLDVA 387
Query: 837 XXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+ C P ++ Y ++ G +A+++ ++ G P+
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Score = 67.0 bits (162), Expect = 1e-08
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ GK +E + LL+ + G PD LI FC D A + ++ + G D+
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 672 FAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXXX 851
YN +++ CK K + A ++ ++ G P+S +YN + +L
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 852 XXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDM 989
N +P ITY +I EG + EA +LL +M S P +
Sbjct: 464 MM-SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Score = 65.9 bits (159), Expect = 2e-08
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Frame = +3
Query: 495 CKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG-ETDV 671
C+ G+ D + LE + G PD++ ++ C + +D+A ++ L + G +
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 672 FAYNALISGFCKM-NKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXXXXXXXX 848
+YN + S +KI A + +L M + G PD +TYN +I LC R
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMM-SNGIDPDEITYNSMISCLC-REGMVDEAFELL 496
Query: 849 XXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPD 986
+P+V+TY I++ I +A+ +L+ M+ G +P+
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542
Score = 62.8 bits (151), Expect = 2e-07
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Frame = +3
Query: 480 VLNWSCKVGKYDETLYLLECKMKSGYKPDVILCTKLIKGFCNSKNSDKAEKVMQILEQFG 659
VL CK GK D+ L + + G P+ + +S DK + ILE
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS--GDKIRALHMILEMMS 466
Query: 660 ---ETDVFAYNALISGFCKMNKIEAANKVLNRMKARGFPPDSVTYNILIGSLCDRXXXXX 830
+ D YN++IS C+ ++ A ++L M++ F P VTYNI++ C +
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC-KAHRIE 525
Query: 831 XXXXXXXXXEENNCNPTVITYTILIEATILEGGIHEAMKLLDEML 965
N C P TYT+LIE G EAM+L ++++
Sbjct: 526 DAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570