BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00019004
         (820 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004232632.1| PREDICTED: H/ACA ribonucleoprotein complex s...   197   4e-48
ref|XP_006363181.1| PREDICTED: H/ACA ribonucleoprotein complex s...   179   1e-42
ref|NP_191274.1| putative pseudouridine synthase NAP57 [Arabidop...   150   7e-34
ref|XP_006396764.1| hypothetical protein EUTSA_v10028535mg [Eutr...   149   2e-33
ref|XP_006396760.1| hypothetical protein EUTSA_v10029296mg [Eutr...   149   2e-33
ref|XP_002878134.1| hypothetical protein ARALYDRAFT_486159 [Arab...   149   2e-33
ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex s...   147   4e-33
gb|ACU23412.1| unknown [Glycine max]                                  144   4e-32
gb|ESW20376.1| hypothetical protein PHAVU_006G203800g [Phaseolus...   144   5e-32
ref|XP_002308911.1| dyskerin family protein [Populus trichocarpa...   144   5e-32
gb|EOY09080.1| NAP57 isoform 2 [Theobroma cacao]                      143   8e-32
gb|EOY09079.1| NAP57 isoform 1 [Theobroma cacao]                      143   8e-32
ref|XP_006421248.1| hypothetical protein CICLE_v10004588mg [Citr...   140   4e-31
gb|EMJ23263.1| hypothetical protein PRUPE_ppa003227mg [Prunus pe...   140   4e-31
ref|XP_003531534.2| PREDICTED: H/ACA ribonucleoprotein complex s...   140   7e-31
gb|EMJ11064.1| hypothetical protein PRUPE_ppa003802mg [Prunus pe...   139   1e-30
ref|XP_003569731.1| PREDICTED: H/ACA ribonucleoprotein complex s...   138   2e-30
dbj|BAJ93106.1| predicted protein [Hordeum vulgare subsp. vulgare]    138   3e-30
gb|EMT07357.1| H/ACA ribonucleoprotein complex subunit 4 [Aegilo...   137   4e-30
ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s...   137   4e-30

>ref|XP_004232632.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Solanum
           lycopersicum]
          Length = 587

 Score =  197 bits (501), Expect = 4e-48
 Identities = 109/160 (68%), Positives = 114/160 (71%), Gaps = 7/160 (4%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEW RNVVL T 
Sbjct: 362 VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWTRNVVLSTK 421

Query: 183 GDAMVAGLAAACVKPDPDAVAADG---XXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSAL 353
            D +VAGLAAA VK DPDAVAADG                   NKRKLDD+DVSP PSAL
Sbjct: 422 EDTLVAGLAAATVKSDPDAVAADGAAVEVEKKKKKHKEDDEDANKRKLDDLDVSPAPSAL 481

Query: 354 KKPKVEIVEEALG----TXXXXXXXXXXXXXAATPDVESL 461
           KKPKVE+VEEAL                   AA+PDVES+
Sbjct: 482 KKPKVEVVEEALDKSELKKEKKKKKKKEADEAASPDVESV 521


>ref|XP_006363181.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Solanum
           tuberosum]
          Length = 573

 Score =  179 bits (453), Expect = 1e-42
 Identities = 101/157 (64%), Positives = 105/157 (66%), Gaps = 4/157 (2%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEW RNVVL T 
Sbjct: 362 VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWSRNVVLSTK 421

Query: 183 GDAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKP 362
            D MVAGLAA          AADG                NKRKLDD+DVSP PSALKKP
Sbjct: 422 EDTMVAGLAA----------AADGEIEKKKKKHKEDDEEANKRKLDDLDVSPAPSALKKP 471

Query: 363 KVEIVEEALG----TXXXXXXXXXXXXXAATPDVESL 461
           KVE+VEEA+                   A +PDVESL
Sbjct: 472 KVELVEEAVEKSELKKEKKKKKKKEADEAGSPDVESL 508


>ref|NP_191274.1| putative pseudouridine synthase NAP57 [Arabidopsis thaliana]
           gi|67460428|sp|Q9LD90.1|CBF5_ARATH RecName: Full=H/ACA
           ribonucleoprotein complex subunit 4; AltName: Full=CBF5
           homolog; AltName: Full=Dyskerin; AltName:
           Full=Nopp-140-associated protein of 57 kDa homolog;
           Short=AtNAP57; AltName: Full=Nucleolar protein NAP57
           homolog gi|8901186|gb|AAF43210.2|AF234984_1 putative
           pseudouridine synthase [Arabidopsis thaliana]
           gi|6911885|emb|CAB72185.1| putative protein [Arabidopsis
           thaliana] gi|28392852|gb|AAO41863.1| unknown protein
           [Arabidopsis thaliana] gi|225898727|dbj|BAH30494.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332646100|gb|AEE79621.1| putative pseudouridine
           synthase NAP57 [Arabidopsis thaliana]
          Length = 565

 Score =  150 bits (378), Expect = 7e-34
 Identities = 79/126 (62%), Positives = 87/126 (69%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRASMKKKL+A+GKLDKHGKPN+KTP EW RNVVLPTG
Sbjct: 353 VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPVEWSRNVVLPTG 412

Query: 183 GDAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKP 362
           GDA++AG AAA     P+ + AD                  KRK DD   SP P   KK 
Sbjct: 413 GDAIIAGAAAA-----PEEIKADA--------ENGEAGEARKRKHDDSSDSPAPVTTKKS 459

Query: 363 KVEIVE 380
           K + VE
Sbjct: 460 KTKEVE 465


>ref|XP_006396764.1| hypothetical protein EUTSA_v10028535mg [Eutrema salsugineum]
           gi|557097781|gb|ESQ38217.1| hypothetical protein
           EUTSA_v10028535mg [Eutrema salsugineum]
          Length = 583

 Score =  149 bits (375), Expect = 2e-33
 Identities = 80/126 (63%), Positives = 88/126 (69%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRASMKKKL+A+GKLDKHGKPN+KTP EW RNVVLPTG
Sbjct: 344 VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPVEWSRNVVLPTG 403

Query: 183 GDAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKP 362
           GDAM+AG AAA  K +    A +G                 KRK D  D SP P + KK 
Sbjct: 404 GDAMIAGAAAAPEKDEKKVEAENG-----------EAGEARKRKHDGND-SPAPVSTKKA 451

Query: 363 KVEIVE 380
           K + VE
Sbjct: 452 KTKEVE 457


>ref|XP_006396760.1| hypothetical protein EUTSA_v10029296mg [Eutrema salsugineum]
           gi|557097777|gb|ESQ38213.1| hypothetical protein
           EUTSA_v10029296mg [Eutrema salsugineum]
          Length = 550

 Score =  149 bits (375), Expect = 2e-33
 Identities = 80/126 (63%), Positives = 88/126 (69%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRASMKKKL+A+GKLDKHGKPN+KTP EW RNVVLPTG
Sbjct: 344 VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPVEWSRNVVLPTG 403

Query: 183 GDAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKP 362
           GDAM+AG AAA  K +    A +G                 KRK D  D SP P + KK 
Sbjct: 404 GDAMIAGAAAAPEKDEKKVEAENG-----------EAGEARKRKHDGND-SPAPVSTKKA 451

Query: 363 KVEIVE 380
           K + VE
Sbjct: 452 KTKEVE 457


>ref|XP_002878134.1| hypothetical protein ARALYDRAFT_486159 [Arabidopsis lyrata subsp.
           lyrata] gi|297323972|gb|EFH54393.1| hypothetical protein
           ARALYDRAFT_486159 [Arabidopsis lyrata subsp. lyrata]
          Length = 561

 Score =  149 bits (375), Expect = 2e-33
 Identities = 78/126 (61%), Positives = 88/126 (69%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRASMKKKL+A+GKLDKHGKPN+KTP EW RNVVLPTG
Sbjct: 353 VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPVEWSRNVVLPTG 412

Query: 183 GDAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKP 362
           GDA++AG AAA V+   +A   +                  KRK DD   SP P + KK 
Sbjct: 413 GDAIIAGAAAAPVEIKAEAENGEAGEV-------------RKRKHDDSSDSPAPVSTKKS 459

Query: 363 KVEIVE 380
           K + VE
Sbjct: 460 KTKEVE 465


>ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
           max]
          Length = 589

 Score =  147 bits (371), Expect = 4e-33
 Identities = 77/127 (60%), Positives = 89/127 (70%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRASMKK+L++EGKLDKHGKPN+KTP EW+RN+VLPTG
Sbjct: 359 VVAKIKRVVMDRDTYPRKWGLGPRASMKKRLISEGKLDKHGKPNEKTPQEWLRNLVLPTG 418

Query: 183 GDAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKP 362
           GD+++AGLAAA    D      +G               G KRK  +   SPV    KK 
Sbjct: 419 GDSVIAGLAAAPEPEDDKIQKKEG------------DGEGKKRKKHESTDSPVAVPAKKV 466

Query: 363 KVEIVEE 383
           KV+ VEE
Sbjct: 467 KVDEVEE 473


>gb|ACU23412.1| unknown [Glycine max]
          Length = 257

 Score =  144 bits (363), Expect = 4e-32
 Identities = 76/127 (59%), Positives = 88/127 (69%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYP KWGLGPRASMKK+L++EGKLDKHGKPN+KTP EW+RN+VLPTG
Sbjct: 27  VVAKIKRVVMDRDTYPWKWGLGPRASMKKRLISEGKLDKHGKPNEKTPQEWLRNLVLPTG 86

Query: 183 GDAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKP 362
           GD+++AGLAAA    D      +G               G KRK  +   SPV    KK 
Sbjct: 87  GDSVIAGLAAAPEPEDDKIQKKEG------------DGEGKKRKKHESTDSPVAVPAKKV 134

Query: 363 KVEIVEE 383
           KV+ VEE
Sbjct: 135 KVDEVEE 141


>gb|ESW20376.1| hypothetical protein PHAVU_006G203800g [Phaseolus vulgaris]
          Length = 571

 Score =  144 bits (362), Expect = 5e-32
 Identities = 76/127 (59%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRASMKKKL+++G LDKHGKPN+KTP EW+RN+VLPTG
Sbjct: 355 VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLISQGMLDKHGKPNEKTPQEWLRNLVLPTG 414

Query: 183 GDAMVAGLAAACVKPDP-DAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKK 359
           GD+++AG+AAA   P+P D    DG               G KRK  +   SPV    KK
Sbjct: 415 GDSVIAGMAAA---PEPEDEKDGDG--------------EGRKRKKHESTDSPVSVPAKK 457

Query: 360 PKVEIVE 380
            KV++ E
Sbjct: 458 AKVDVEE 464


>ref|XP_002308911.1| dyskerin family protein [Populus trichocarpa]
           gi|222854887|gb|EEE92434.1| dyskerin family protein
           [Populus trichocarpa]
          Length = 593

 Score =  144 bits (362), Expect = 5e-32
 Identities = 77/129 (59%), Positives = 89/129 (68%), Gaps = 3/129 (2%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRAS+KKKL++EGKLDKHGKPN+ TP EWMRN+VLP G
Sbjct: 361 VVAKIKRVVMDRDTYPRKWGLGPRASIKKKLISEGKLDKHGKPNENTPHEWMRNLVLPPG 420

Query: 183 GDAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSP---VPSAL 353
           GD+MVAG+AAA  +P    V   G               G KRKL++   SP   VP+  
Sbjct: 421 GDSMVAGIAAAAAEP---VVKEIGEEEKKKKNKDGEDGEGRKRKLNESSDSPAAQVPAKK 477

Query: 354 KKPKVEIVE 380
            K + E VE
Sbjct: 478 TKTEEEPVE 486


>gb|EOY09080.1| NAP57 isoform 2 [Theobroma cacao]
          Length = 583

 Score =  143 bits (360), Expect = 8e-32
 Identities = 80/135 (59%), Positives = 86/135 (63%), Gaps = 9/135 (6%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGP AS KKKL+AEGKLDKHGKPND TP EW+RNVVLP G
Sbjct: 357 VVAKIKRVVMDRDTYPRKWGLGPTASTKKKLIAEGKLDKHGKPNDSTPKEWLRNVVLPAG 416

Query: 183 GDAMVAGLAAA---CVKPDPDAV------AADGXXXXXXXXXXXXXXXGNKRKLDDMDVS 335
           GD+MVA LAA+    VK    AV        +                G+KRKLD    S
Sbjct: 417 GDSMVASLAASAEPAVKDSDTAVVEKEITVVEKEKEKKKKGKGEEDGEGHKRKLDGSSDS 476

Query: 336 PVPSALKKPKVEIVE 380
            VP   KK KVE  E
Sbjct: 477 AVPVVAKKAKVEEAE 491


>gb|EOY09079.1| NAP57 isoform 1 [Theobroma cacao]
          Length = 614

 Score =  143 bits (360), Expect = 8e-32
 Identities = 80/135 (59%), Positives = 86/135 (63%), Gaps = 9/135 (6%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGP AS KKKL+AEGKLDKHGKPND TP EW+RNVVLP G
Sbjct: 357 VVAKIKRVVMDRDTYPRKWGLGPTASTKKKLIAEGKLDKHGKPNDSTPKEWLRNVVLPAG 416

Query: 183 GDAMVAGLAAA---CVKPDPDAV------AADGXXXXXXXXXXXXXXXGNKRKLDDMDVS 335
           GD+MVA LAA+    VK    AV        +                G+KRKLD    S
Sbjct: 417 GDSMVASLAASAEPAVKDSDTAVVEKEITVVEKEKEKKKKGKGEEDGEGHKRKLDGSSDS 476

Query: 336 PVPSALKKPKVEIVE 380
            VP   KK KVE  E
Sbjct: 477 AVPVVAKKAKVEEAE 491


>ref|XP_006421248.1| hypothetical protein CICLE_v10004588mg [Citrus clementina]
           gi|557523121|gb|ESR34488.1| hypothetical protein
           CICLE_v10004588mg [Citrus clementina]
          Length = 600

 Score =  140 bits (354), Expect = 4e-31
 Identities = 79/127 (62%), Positives = 87/127 (68%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVA+IKRVVMDRDTYPRKWGLGPRASMKKKL+AEGKLDKHGKPN+KTP EW RNVVLP G
Sbjct: 375 VVARIKRVVMDRDTYPRKWGLGPRASMKKKLIAEGKLDKHGKPNEKTPLEWARNVVLPPG 434

Query: 183 GDAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKP 362
           GD++VA LAAA  +   +   AD                  KRKLD    SP  +A KK 
Sbjct: 435 GDSVVASLAAAAEQTVAEKETAD----------------VKKRKLDASSDSPALNA-KKA 477

Query: 363 KVEIVEE 383
           KVE V E
Sbjct: 478 KVEEVVE 484


>gb|EMJ23263.1| hypothetical protein PRUPE_ppa003227mg [Prunus persica]
          Length = 591

 Score =  140 bits (354), Expect = 4e-31
 Identities = 80/138 (57%), Positives = 91/138 (65%), Gaps = 10/138 (7%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRAS KKKL+AEGKLD+HGKP + TP EW+RNVVLPTG
Sbjct: 366 VVAKIKRVVMDRDTYPRKWGLGPRASKKKKLIAEGKLDRHGKPTESTPQEWIRNVVLPTG 425

Query: 183 GDAMVAGLAAA-CVKPDPDAVA---------ADGXXXXXXXXXXXXXXXGNKRKLDDMDV 332
           GD +VAG AAA C +P   AVA          +                G KRKL++   
Sbjct: 426 GDFIVAGTAAALCTEP---AVAEKEKEKEKEKEKEKKKDNNKDEEEAKEGCKRKLEERAE 482

Query: 333 SPVPSALKKPKVEIVEEA 386
           SPVP   KK K E VE++
Sbjct: 483 SPVPVPAKKSKSEEVEKS 500


>ref|XP_003531534.2| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
           max]
          Length = 580

 Score =  140 bits (352), Expect = 7e-31
 Identities = 77/128 (60%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRASMKK+L++EGKLDKHGKPN+KTP EW+RN+VLPTG
Sbjct: 351 VVAKIKRVVMDRDTYPRKWGLGPRASMKKRLISEGKLDKHGKPNEKTPQEWLRNLVLPTG 410

Query: 183 GDAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKP 362
           GD+M+AGLAAA   P+P+                     G KRK  +   S V    KK 
Sbjct: 411 GDSMIAGLAAA---PEPE--------DDKLQKKEEGDGEGKKRKKHESTDSLVAVPAKKA 459

Query: 363 K-VEIVEE 383
           K V+ VEE
Sbjct: 460 KVVDEVEE 467


>gb|EMJ11064.1| hypothetical protein PRUPE_ppa003802mg [Prunus persica]
          Length = 548

 Score =  139 bits (350), Expect = 1e-30
 Identities = 77/135 (57%), Positives = 87/135 (64%), Gaps = 7/135 (5%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVAKIKRVVMDRDTYPRKWGLGPRASMKKKL+AEGKLDKHGKP + TP EW RNVVLPTG
Sbjct: 364 VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIAEGKLDKHGKPTESTPQEWTRNVVLPTG 423

Query: 183 GDAMVAGLAAA-CVKPDPD------AVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPV 341
           GD++VAG AAA   +P P                              KRKL++   SPV
Sbjct: 424 GDSIVAGTAAALATEPAPAEKETTLVEEKKEKKKKDKHKDEEESKESRKRKLEERAESPV 483

Query: 342 PSALKKPKVEIVEEA 386
           P   KK K E V+++
Sbjct: 484 PVPAKKSKGEEVDKS 498


>ref|XP_003569731.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
           [Brachypodium distachyon]
          Length = 591

 Score =  138 bits (348), Expect = 2e-30
 Identities = 73/130 (56%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
 Frame = +3

Query: 6   VAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTGG 185
           VAKIKRVVMDRDTYPRKWGLGP A  KKK++AEG LDKHGKP +KTPAEW+RNVVLPTGG
Sbjct: 378 VAKIKRVVMDRDTYPRKWGLGPVALKKKKMIAEGLLDKHGKPTEKTPAEWLRNVVLPTGG 437

Query: 186 DAMVAGLAAACVKPDPDAVAAD-GXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKP 362
           DAM+A +AAA   P+P+ V  +                 G KRK+D+ D S    A K  
Sbjct: 438 DAMIASIAAA---PEPEKVKVEQADVKEKNKHEEDKADGGRKRKVDEDDASASTPAKKIK 494

Query: 363 KVEIVEEALG 392
             E++E   G
Sbjct: 495 SEEVIEAVEG 504


>dbj|BAJ93106.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 605

 Score =  138 bits (347), Expect = 3e-30
 Identities = 77/128 (60%), Positives = 88/128 (68%)
 Frame = +3

Query: 6   VAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTGG 185
           VAKIKRVVMDRDTYPRKWGLGP A  KKK++AEG LDKHGKP DKTPAEW+RNVVLPTGG
Sbjct: 376 VAKIKRVVMDRDTYPRKWGLGPVALKKKKMIAEGLLDKHGKPTDKTPAEWLRNVVLPTGG 435

Query: 186 DAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKPK 365
           DAM+A LAAA   P+P+ V A+                  KRK D+ D++    A KK K
Sbjct: 436 DAMIASLAAA---PEPEKVKAE----QQNVVPSEEVKEKKKRKSDEDDITASTPA-KKIK 487

Query: 366 VEIVEEAL 389
            E V EA+
Sbjct: 488 AEEVTEAV 495


>gb|EMT07357.1| H/ACA ribonucleoprotein complex subunit 4 [Aegilops tauschii]
          Length = 572

 Score =  137 bits (346), Expect = 4e-30
 Identities = 77/128 (60%), Positives = 88/128 (68%)
 Frame = +3

Query: 6   VAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTGG 185
           VAKIKRVVMDRDTYPRKWGLGP A  KKK++AEG LDKHGKP +KTPAEW+RNVVLPTGG
Sbjct: 344 VAKIKRVVMDRDTYPRKWGLGPVALKKKKMIAEGLLDKHGKPTEKTPAEWLRNVVLPTGG 403

Query: 186 DAMVAGLAAACVKPDPDAVAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSALKKPK 365
           DAM+A LAAA   P+P+ V  +                  KRK D+ DV+    A KK K
Sbjct: 404 DAMIASLAAA---PEPEKVKVE----QQDVVPSEQVKEKKKRKTDEDDVTASTPA-KKMK 455

Query: 366 VEIVEEAL 389
           VE V EA+
Sbjct: 456 VEEVTEAV 463


>ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis
           vinifera]
          Length = 586

 Score =  137 bits (346), Expect = 4e-30
 Identities = 77/130 (59%), Positives = 88/130 (67%), Gaps = 4/130 (3%)
 Frame = +3

Query: 3   VVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWMRNVVLPTG 182
           VVA+IKRVVMDRDTYPRKWGLGPRA+MKKKL+ EGKL+KHGKPN+ TP+EW+RNVVLPTG
Sbjct: 365 VVARIKRVVMDRDTYPRKWGLGPRAAMKKKLITEGKLNKHGKPNENTPSEWLRNVVLPTG 424

Query: 183 GDAMVAGLAAA---CVKPDPDA-VAADGXXXXXXXXXXXXXXXGNKRKLDDMDVSPVPSA 350
           GD+MVA LAAA    VK + D     DG                 KRKL++    PV   
Sbjct: 425 GDSMVASLAAAVEPTVKAETDVKEEIDGEQ--------------RKRKLNESTDDPVTVP 470

Query: 351 LKKPKVEIVE 380
            KK K EI E
Sbjct: 471 AKKIKKEIEE 480