BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00018899
         (2500 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...   228   3e-78
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...   222   2e-71
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...   187   1e-44
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...    96   5e-36
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...   138   1e-33
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...   122   2e-29
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...   117   1e-28
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A...   125   4e-28
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...   117   9e-27
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...   128   1e-26
gb|ABI34321.1| RNase H family protein [Solanum demissum]              126   3e-26
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...   113   4e-26
gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theob...   111   8e-26
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253...    83   9e-26
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...   114   1e-24
ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262...   118   1e-23
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A...   107   1e-23
ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244...   115   7e-23
ref|XP_004229073.1| PREDICTED: putative ribonuclease H protein A...   115   1e-22
gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]   102   2e-22

>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score =  228 bits (580), Expect(2) = 3e-78
 Identities = 110/329 (33%), Positives = 190/329 (57%)
 Frame = -2

Query: 2451 RKCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAEND 2272
            R+   +RE++EHEIW +++  NS F+ DNWT  GALYHI     E +   + VKE    +
Sbjct: 402  RRMISIREEVEHEIWWQIKAGNSSFWFDNWTKQGALYHIEENAKEEE---VEVKEFCTGE 458

Query: 2271 KWNEDMMNEILPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKEP 2092
             W+++ + + L  E+  +I+ +I+ P    G+D   W   A+G FTV SA+Q+ + ++E 
Sbjct: 459  GWDKEKLLQNLSLEMTDHIMENISPPNTLFGNDVVWWMANAQGIFTVKSAWQITRNKQEV 518

Query: 2091 RKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVF 1912
            R+  + +W K  P KI+FFMWR WK ++  +D LK+     +SR + C   + E ++H+F
Sbjct: 519  RRDCEVIWNKELPFKINFFMWRVWKRRIATDDNLKKMRINIVSRCWCCDRKKEETMTHLF 578

Query: 1911 LLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEVKYVYHVVPAIILWEF*KI 1732
              AP    + +YF    GI+I  +H+ Q++  WW      +++ +Y  +PAII+W   K 
Sbjct: 579  PTAPITYKLWRYFAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKR 638

Query: 1731 RNTLRHEETISTTKLIYQVLHTLILFMKVKRKLFKYAPYRWESIVEALDRYFQQVKITTV 1552
            RN L+H+ +IS  +++  V+  +   +K +    K   + W++I++ L++Y +++ +  V
Sbjct: 639  RNALKHDSSISWERMVEMVIEVVRKMVKSQFPWIKNMRWTWQAIIQRLNQYKRKIHVLRV 698

Query: 1551 VWKMPNRDRIKVNTDDASKDNPGRSA*SF 1465
             WK P+   +K NTD A + NPG S+  F
Sbjct: 699  TWKPPDDHYVKSNTDGACRGNPGLSSFGF 727



 Score = 94.4 bits (233), Expect(2) = 3e-78
 Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
 Frame = -1

Query: 1468 FFVRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRNI 1289
            F +RD+ GD+++AK + +   ++TN + E +AIL ALR   N +  +VIIETDSL L+ I
Sbjct: 727  FCIRDDKGDLIYAKAKGIG--IATNMEAETVAILTALRECSNRKMQKVIIETDSLSLKKI 784

Query: 1288 INKIWKVSWHXXXXXXXXXXXXXXXXXXIQHIYREGNKVVDHLSNVTLDS-GNVMVNNFL 1112
            I + W+V W                   I HI+REGN + D L+N+ ++S      + F 
Sbjct: 785  IQQTWRVPWKIAEKVEEIREIMEKIKAKITHIFREGNSLADSLANIAIESQAEHQYSCFQ 844

Query: 1111 ELGRQGRRLVNGDKLEGPYLRIR 1043
            EL  + RR++N DK + P LRIR
Sbjct: 845  ELPLKERRILNIDKAQIPTLRIR 867


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score =  222 bits (566), Expect(2) = 2e-71
 Identities = 117/329 (35%), Positives = 175/329 (53%), Gaps = 3/329 (0%)
 Frame = -2

Query: 2451 RKCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWD---PTVIPVKEVA 2281
            RK   +RE++EH+IW +++  NS F+ DNWT  GALY     Y E D      + V+   
Sbjct: 372  RKMISIREEVEHDIWWQIKAGNSSFWFDNWTRQGALY-----YTEGDCAQEEELEVQYFI 426

Query: 2280 ENDKWNEDMMNEILPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQR 2101
             ND W+E  + ++L EE+  +I+ +I      +G DKA W     G FTV SA+  ++ R
Sbjct: 427  TNDGWDETKLKDLLSEEMVEHIILNIRPKTSEEGIDKAWWCGNLTGLFTVKSAYHRIRGR 486

Query: 2100 KEPRKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDIS 1921
            KE  +  + MWIKG P KISFF+WR W+ K+   D LKR +   +S+ + C+  E E ++
Sbjct: 487  KEEEEWRRYMWIKGMPIKISFFLWRVWRRKIATYDNLKRMKIPVVSKCYCCKEGEMETMT 546

Query: 1920 HVFLLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEVKYVYHVVPAIILWEF 1741
            H+ L AP  Q + K F    GI I  L++ Q++ KWWD    +++  +   V A+I+WE 
Sbjct: 547  HLLLTAPIAQKLWKQFASYAGIIINGLNLQQLIFKWWDYKASNKLSQILKAVLAVIMWEL 606

Query: 1740 *KIRNTLRHEETISTTKLIYQVLHTLILFMKVKRKLFKYAPYRWESIVEALDRYFQQVKI 1561
             K RN+ RH +  +   + YQ    L   + +K    K   Y W  +V  L  Y   +  
Sbjct: 607  WKRRNSYRHGKETTYNNMYYQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHY 666

Query: 1560 TTVVWKMPNRDRIKVNTDDASKDNPGRSA 1474
              V W+ P+   +  NTD ASK NP  S+
Sbjct: 667  KVVRWRKPSEGWVTCNTDGASKGNPRMSS 695



 Score = 76.6 bits (187), Expect(2) = 2e-71
 Identities = 42/141 (29%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
 Frame = -1

Query: 1489 PREKCMKFFVRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETD 1310
            PR     + +RD++GD+L+A+   + +  +TN + EA  +  AL++       +V +ETD
Sbjct: 691  PRMSSYGYCIRDKNGDLLYAEAHNIGE--TTNMEAEATTVWKALQFCYENGLRKVRLETD 748

Query: 1309 SLLLRNIINKIWKVSWHXXXXXXXXXXXXXXXXXXIQHIYREGNKVVDHLSNVTLDSGNV 1130
            SL L+N+I + WK+ W                   + H+YRE N++ D ++N T+++ + 
Sbjct: 749  SLALQNMITRSWKIPWELVEKLEEIHEIMQQIDVQVCHVYREVNQLADFIANTTINTEHK 808

Query: 1129 MV-NNFLELGRQGRRLVNGDK 1070
             V ++F +L   G++L+N DK
Sbjct: 809  KVFHHFHQLPSLGKKLLNIDK 829


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score =  187 bits (476), Expect = 1e-44
 Identities = 105/333 (31%), Positives = 170/333 (51%), Gaps = 3/333 (0%)
 Frame = -2

Query: 2451 RKCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTV---IPVKEVA 2281
            RK   +RE++EH IW +++  NS F+ DNWT  GAL+     Y E +  V   I VK   
Sbjct: 778  RKMITVREEVEHNIWWQIKAGNSSFWFDNWTKQGALW-----YVEENNAVEEKIEVKYFT 832

Query: 2280 ENDKWNEDMMNEILPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQR 2101
                W+ + +   + EE+  YI+  I  P+E   +D A W    +G FTV SA++L++ +
Sbjct: 833  HQGAWDREKLLNKISEEMTDYIMESIKPPLEEYINDVAWWMGSTQGIFTVKSAWELMRHK 892

Query: 2100 KEPRKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDIS 1921
            +E R  Y+ +W K  P K++FF+WR WK ++  +D LKR + Q +SR + C   E E ++
Sbjct: 893  QERRTDYQLIWTKDVPFKMNFFLWRLWKRRIATDDNLKRMKIQIVSRCWCCSETEEETMT 952

Query: 1920 HVFLLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEVKYVYHVVPAIILWEF 1741
            H+FL AP    + + F    GI I+++H+ Q++  WW     +++K V   +P II+W  
Sbjct: 953  HIFLTAPIANRLWRQFSNFAGIQIESMHLQQLIINWWKHSDNAKLKVVMRAMPTIIMWTL 1012

Query: 1740 *KIRNTLRHEETISTTKLIYQVLHTLILFMKVKRKLFKYAPYRWESIVEALDRYFQQVKI 1561
             K RN  +H  T + ++++ QV                                 Q+ K 
Sbjct: 1013 WKRRNNFKHRGTTTYSEVVMQV---------------------------------QEEK- 1038

Query: 1560 TTVVWKMPNRDRIKVNTDDASKDNPGRSA*SFL 1462
                   P R+++K NTD A++ N G S+ SF+
Sbjct: 1039 -------PGRNKVKCNTDGAARGNSGASSTSFV 1064


>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score = 96.3 bits (238), Expect(2) = 5e-36
 Identities = 58/193 (30%), Positives = 94/193 (48%)
 Frame = -2

Query: 2022 WKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVFLLAPDGQLI*KYFCRQVGIDIQN 1843
            WKFK+P+++ ++      +SR + C   ++E +SH+FL       +   F    GI ++ 
Sbjct: 2    WKFKVPVDEVVQSMGINLVSRCWCCIQSKSETMSHLFLTFYTAAKLWILFANVAGISLEG 61

Query: 1842 LHITQVVNKWWDLPVKSEVKYVYHVVPAIILWEF*KIRNTLRHEETISTTKLIYQVLHTL 1663
            L ++QVV KWW       +K +  VVP +++W   K RN L+H    S   L+Y+V   L
Sbjct: 62   LQLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNLWKRRNNLKHGRPSSYNNLVYRVNSDL 121

Query: 1662 ILFMKVKRKLFKYAPYRWESIVEALDRYFQQVKITTVVWKMPNRDRIKVNTDDASKDNPG 1483
                +      +  P +W  IV  L+++  ++    V WK P    +  NTD AS+ NP 
Sbjct: 122  WKLGRTIYPKLQDFPTKWSDIVACLEKHKPKLYYLPVCWK-PPEGILTCNTDVASRCNPE 180

Query: 1482 RSA*SFL*EMRVG 1444
             S+  F     VG
Sbjct: 181  ISSYGFCLRNSVG 193



 Score = 84.7 bits (208), Expect(2) = 5e-36
 Identities = 48/143 (33%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
 Frame = -1

Query: 1468 FFVRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRNI 1289
            F +R+  GD+++ + +E+++   TN +VEA+AI   L +       +  +ETDS +L  I
Sbjct: 186  FCLRNSVGDLVYVQGKEIQE--GTNLEVEAVAIREDLAHCVTKGVMKACLETDSQVLIKI 243

Query: 1288 INKIWKVSWHXXXXXXXXXXXXXXXXXXIQHIYREGNKVVDHLSNVTLDSGNVMV-NNFL 1112
            + +IW+V W                   IQH+YREGN + D+L+N+   + N++V N+F 
Sbjct: 244  LTRIWEVPWSIVVIIEDIWGLFQECHVQIQHVYREGNTLADYLANLAFFNPNIIVYNSFA 303

Query: 1111 ELGRQGRRLVNGDKLEGPYLRIR 1043
            EL  Q +++VN DK + P ++IR
Sbjct: 304  ELPSQAKKIVNLDKQQLPNIKIR 326


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score =  138 bits (347), Expect(2) = 1e-33
 Identities = 84/328 (25%), Positives = 164/328 (50%), Gaps = 7/328 (2%)
 Frame = -2

Query: 2451 RKCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAEND 2272
            R  +++R+++E  I   +   N  F+ DNW G GA+          +   + + E+ EN 
Sbjct: 535  RYLTRIRQEVEKYIKWNIHTGNCSFWWDNWIGDGAVATKCDNISSLNN--VKIAELTENG 592

Query: 2271 KWNEDMMNEILPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKEP 2092
            KW E  + +++P  L   IL+ +    +++ SD A W ++ +GKFT+ SA+ +++++   
Sbjct: 593  KWKERQVRQLVPPLLVPNILDTV-IQAKNEKSDYAIWTLEDKGKFTIHSAWNIIRKKNIS 651

Query: 2091 RKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVF 1912
              + + +W K  P K+SFF+W+  + KLP ND L  +       Y  C     +DI H+ 
Sbjct: 652  DPINQFIWHKNIPFKVSFFIWKALRNKLPTNDSLMNFGMDEQECY-CCFRKGKDDILHIL 710

Query: 1911 LLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIILWEF*K 1735
            +     + I K    ++G+   + ++  ++  W ++PV ++V K +Y ++P  I W   K
Sbjct: 711  ITGNFAKYIWKIHATRLGVHQDHANLRSLLLHWRNIPVHNQVQKLLYQILPNFICWNLWK 770

Query: 1734 IRNTLRH-EETISTTKLIYQVLH-----TLILFMKVKRKLFKYAPYRWESIVEALDRYFQ 1573
             R  ++H  +  ST ++ Y +        ++ F  + R+         + ++   +   Q
Sbjct: 771  NRCAVKHGSKQCSTQRVQYAIFKDTMQAVMVAFPNISRQ------NNLDMLINLAENCQQ 824

Query: 1572 QVKITTVVWKMPNRDRIKVNTDDASKDN 1489
            QVK+T V+W+ P+    K+NTD ++  N
Sbjct: 825  QVKVTKVMWEKPSLGIFKLNTDGSAIHN 852



 Score = 34.7 bits (78), Expect(2) = 1e-33
 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
 Frame = -1

Query: 1462 VRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRNIIN 1283
            +RD +G +++A    +   + TN   E  A L  L + +     R+I+E DS LL   I+
Sbjct: 862  LRDHNGKLIYAFA--IPFGIGTNNFAEMKAALYGLSWCEQHGYKRIILEVDSELLSKWID 919

Query: 1282 KIWKVSWH-XXXXXXXXXXXXXXXXXXIQHIYREGNKVVDHLS 1157
                + W                     QHI+RE N   D L+
Sbjct: 920  NSINIPWRCQPTIYQIQDIVNKMEYFQCQHIFREANGTADLLA 962


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score =  122 bits (307), Expect(2) = 2e-29
 Identities = 89/333 (26%), Positives = 159/333 (47%), Gaps = 9/333 (2%)
 Frame = -2

Query: 2451 RKCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVI----PVKEV 2284
            R  ++ R+K+E  I   +Q     F+ D W          P   + D         V + 
Sbjct: 980  RYLTRNRQKVESLIKWHIQSGTCSFWWDCWLDK-------PLAMQCDHVSSLNNSVVADF 1032

Query: 2283 AENDKWNEDMMNEILPEELASYILN-HINYPVEHKGSDKACWKIKARGKFTVGSAFQLLK 2107
              N  WNE ++ + +P +L  YIL   INY   +   D + W     G+FT+ SA+  ++
Sbjct: 1033 LINGNWNERLLRQHVPPQLVPYILQTKINYQAGN--IDTSIWTPTESGQFTISSAWDSIR 1090

Query: 2106 QRKEPRKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENED 1927
            +++    +   +W K  P K+SFF+WR  + KLP N+ L+R     LS  + C N   +D
Sbjct: 1091 KKRNKDPINNIIWHKQIPFKVSFFIWRALRGKLPTNENLQRIGKN-LSDCYCCYNKGKDD 1149

Query: 1926 ISHVFLLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIIL 1750
            I+H+ +     + I K +   VG+   N  +  ++ +W +    +EV K + H++P  I 
Sbjct: 1150 INHILINGNFAKYIWKIYSSAVGVLPINTTLRDLLLQWRNQQYTNEVHKLLIHILPNFIC 1209

Query: 1749 WEF*KIRNTLRHEETISTTKLIYQVLHTLIL-FMKVKRKLFKYAPYR--WESIVEALDRY 1579
            W   K R  +++    S+   IY+V + +    M+V   +F   P++  W +++  +++ 
Sbjct: 1210 WNLWKNRCAVKYGLKNSS---IYRVQYGIFKNIMQVITIVFPSIPWQTSWNNLINIVEQC 1266

Query: 1578 FQQVKITTVVWKMPNRDRIKVNTDDASKDNPGR 1480
             Q  KI  V W  P+  + K+NTD ++  N G+
Sbjct: 1267 KQHYKILIVKWNKPDLGKYKLNTDGSALQNSGK 1299



 Score = 35.8 bits (81), Expect(2) = 2e-29
 Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
 Frame = -1

Query: 1462 VRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRNIIN 1283
            +RD  G I++A +  L     TN   E  A L  L + +     ++ +E DS LL N IN
Sbjct: 1306 LRDNQGKIIYAFS--LPFGFGTNNFAEIKAALHGLDWCEQHGYKKIELEVDSKLLCNWIN 1363

Query: 1282 KIWKVSW-HXXXXXXXXXXXXXXXXXXIQHIYREGNKVVDHLS 1157
                + W +                    HIYRE N   D LS
Sbjct: 1364 SNINIPWRYEELIQQIHQIIRKMDQFQCHHIYREANCTADLLS 1406


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score =  117 bits (294), Expect(2) = 1e-28
 Identities = 83/329 (25%), Positives = 158/329 (48%), Gaps = 5/329 (1%)
 Frame = -2

Query: 2451 RKCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAEND 2272
            R  ++ R K+E  I  ++    S F+ DNW     L          +  V  V +  ++ 
Sbjct: 786  RYLTRNRLKVESLIKWQIHSGTSSFWWDNWLDNENLASQSDHISSLNNGV--VTDFIKDG 843

Query: 2271 KWNEDMM-NEILPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKE 2095
            KWNE ++ +++ P  +   +   +NY    +  D A W     G FT+ SA++ ++ ++ 
Sbjct: 844  KWNESLIRHQVNPLFIPKILQTKLNYSTGKE--DNAIWIPTETGNFTIASAWECIRNKRP 901

Query: 2094 PRKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHV 1915
               +   +W K  P KI+FF+WR  K KLP N+ L+R+    +S+ + C +   +DI+H+
Sbjct: 902  IDTINTIIWHKHLPFKIAFFIWRALKGKLPTNELLQRF-GSAISKCYCCYSKGKDDINHI 960

Query: 1914 FLLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIILWEF* 1738
             +     + I K     +G+   N  +   +  W +  V +EV K + H++P +I W   
Sbjct: 961  LINGNFAKHIWKIHAAILGVVPANTTLRDQLLHWRNQQVNNEVHKLLIHILPNVICWNLW 1020

Query: 1737 KIRNTLRH-EETISTTKLIYQVLHTLILFMKVKRKLFKYAPYR--WESIVEALDRYFQQV 1567
            K R  +++  ++ S  ++ Y +   ++  +K+   +F   P++  W  ++  ++   QQ 
Sbjct: 1021 KNRCAVKYGNKSSSIHRVQYGIFKDVMQVIKI---VFPSIPWQSSWNKLINIVEHCKQQY 1077

Query: 1566 KITTVVWKMPNRDRIKVNTDDASKDNPGR 1480
            KI  V W  P     K+NTD ++  N G+
Sbjct: 1078 KIVLVSWNKPGLGTYKLNTDGSALQNSGK 1106



 Score = 38.1 bits (87), Expect(2) = 1e-28
 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
 Frame = -1

Query: 1462 VRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRNIIN 1283
            +RD  G I++A +  L     TN   E  A L  L + D     RV +E DS LL N I 
Sbjct: 1113 LRDHQGKIVYAFS--LPFGFGTNNIAEIKAALYGLEWCDQHGYKRVELEVDSQLLCNWIK 1170

Query: 1282 KIWKVSW-HXXXXXXXXXXXXXXXXXXIQHIYREGNKVVDHLSNVTLDSGNVMVNNFLEL 1106
                + W +                    HIYRE N   D LS  +  S  ++ + + + 
Sbjct: 1171 NKTNIPWIYEDLIQQIKQITRKIEQFQCHHIYREANITADLLSKWS-HSLELVQHFYTKR 1229

Query: 1105 GRQGRRLVNGD 1073
              +GR+L  G+
Sbjct: 1230 QLEGRKLSIGE 1240


>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 955

 Score =  125 bits (314), Expect(2) = 4e-28
 Identities = 83/328 (25%), Positives = 158/328 (48%), Gaps = 4/328 (1%)
 Frame = -2

Query: 2451 RKCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAEND 2272
            R  ++ R+ +E  I   +   +S F+ DNW G  AL + +      +   I V +   N 
Sbjct: 480  RYFTRNRQAVESYIKWNIHSGSSSFWWDNWLGNEALANQVINISSLNN--IHVSDFLTNG 537

Query: 2271 KWNEDMMNEILPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKEP 2092
             WNE  + + +P  +   I+    +       D A W  +  GKFT+ SA+++++++K  
Sbjct: 538  IWNERYVRQHVPPTMVPDIMQ-TQFKYNINIEDTAIWTPEENGKFTIASAWEVIRKKKST 596

Query: 2091 RKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVF 1912
              +   +W K  P KISFF+WR  + KLP  D L+++       Y  C     +DI+H+ 
Sbjct: 597  DIINNSVWHKHIPFKISFFIWRALRGKLPTYDYLQKFGSNATDCY-CCNRKGIDDINHIL 655

Query: 1911 LLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIILWEF*K 1735
            +       I KY+    GI   N+ +  ++ +W +LP  ++V K +  ++P  I W   K
Sbjct: 656  ITGNFANYIWKYYAPTFGITQINIDLRSLLLQWTNLPSSNQVYKLLISILPNFICWHLWK 715

Query: 1734 IRNTLRHEETISTTKLI-YQVLHTLILFMKVKRKLFKYAPYR--WESIVEALDRYFQQVK 1564
                +++   IS+ + + Y +   ++  +K+   +F   P++  W  ++  +++  QQ+K
Sbjct: 716  NMCAVKYGNKISSIQRVQYGIFKDVMQTIKI---VFPNIPWQHSWYRLINLVEQCQQQLK 772

Query: 1563 ITTVVWKMPNRDRIKVNTDDASKDNPGR 1480
            +  V W+ P     K+NTD ++    G+
Sbjct: 773  VIMVSWRKPQFGIYKLNTDGSALPESGK 800



 Score = 28.9 bits (63), Expect(2) = 4e-28
 Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
 Frame = -1

Query: 1462 VRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRNIIN 1283
            +RD +G + +A +  +   L TN   E  A    L + +      +++E DS +L+  I+
Sbjct: 807  LRDYTGKLHYAFS--IPFGLGTNNIAEMEAARYGLDWCEQHGYKSILLEVDSEILQKWIS 864

Query: 1282 KIWKVSW-HXXXXXXXXXXXXXXXXXXIQHIYREGNKVVDHLS 1157
                + W +                   QH+YRE N   D LS
Sbjct: 865  NTIAIPWRYQQTIEHIQDIGRKMDHFECQHVYREVNGTADLLS 907


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 389

 Score =  117 bits (293), Expect(2) = 9e-27
 Identities = 68/237 (28%), Positives = 127/237 (53%), Gaps = 4/237 (1%)
 Frame = -2

Query: 2178 SDKACWKIKARGKFTVGSAFQLLKQRKEPRKLYKQMWIKGFPTKISFFMWRFWKFKLPLN 1999
            +D A W    +G+FT+ SA+ +++++K+P  ++  +W K  P K SFF+WR  + KLP N
Sbjct: 2    TDSAYWMPDDKGQFTIFSAWDIIRKKKDPDPIHNCVWHKNVPFKTSFFIWRALRSKLPTN 61

Query: 1998 DKLKRWEHQFLSRYFYCQNPENEDISHVFLLAPDGQLI*KYFCRQVGIDIQNLHITQVVN 1819
            + L ++  + L  Y  C     +D+ H+ +     + I K   +++GI I N ++   + 
Sbjct: 62   ENLLKFGKEELECY-CCYRKGKDDLKHILITGNFAKYIWKIHTKRLGIAIVNTNLRSTLL 120

Query: 1818 KWWDLPVKSEV-KYVYHVVPAIILWEF*KIRNTLRHEETISTTKLIYQVLHTLIL-FMKV 1645
             W  L   +EV K + H++P II W   K R + ++    S+   IY+V   +    M++
Sbjct: 121  SWRRLTSYNEVHKLILHILPNIICWNLWKNRCSAKYGNKPSS---IYRVESGIFKDIMQI 177

Query: 1644 KRKLFKYAPYR--WESIVEALDRYFQQVKITTVVWKMPNRDRIKVNTDDASKDNPGR 1480
             + ++   P++  WE +   +++  Q +K+T V W+ P     K+NTD ++K N G+
Sbjct: 178  IKAVYPNIPWQSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTGK 234



 Score = 32.3 bits (72), Expect(2) = 9e-27
 Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
 Frame = -1

Query: 1462 VRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRN-II 1286
            +RD  G +++A    L     TN   E  A L  L++       ++I+E DS LL   II
Sbjct: 241  LRDHQGKLIYAFAIPLG--FGTNNFAEIQAALHGLQWCQQHGFEKIILEVDSELLHKWII 298

Query: 1285 NKIWKVSWHXXXXXXXXXXXXXXXXXXI-QHIYREGNKVVDHLS 1157
            NK   V W                     +HIYRE N   D L+
Sbjct: 299  NKS-SVPWRCLHYIQQIQNISNKMEVFQCKHIYREANGTADLLA 341


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score =  128 bits (322), Expect = 1e-26
 Identities = 89/327 (27%), Positives = 146/327 (44%), Gaps = 6/327 (1%)
 Frame = -2

Query: 2445 CSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAENDKW 2266
            C+  R      I  +++  +  F+ DNW G+G L H                  + ++++
Sbjct: 792  CNPGRIGAGSNIQWRIRSGSCSFWWDNWLGVGPLAHY----------------TSNSNRF 835

Query: 2265 NEDMMNEILPEELASYILNHINYP--VEHKGSDKACWKIKARGKFTVGSAFQLLKQRKEP 2092
            N D ++E + E        H N P  +      +A WK+ + G F+V SA+  +++++E 
Sbjct: 836  NNDSVSEFIEE-------GHWNIPKVLRVAPPSQAVWKLNSSGLFSVSSAWNSIREKREI 888

Query: 2091 RKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVF 1912
             K+ K  W    P K SF +WR  + KLP N+KL  +  +  S    C +P  + I H  
Sbjct: 889  TKINKYTWHPKIPFKCSFLLWRAIRGKLPTNEKLLSFGIE-PSDCHCCHSPGIDTIEHTL 947

Query: 1911 LLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIILWEF*K 1735
                  + + KYF   +GI    L +  ++ +WW  P  +E  K + H  P  I W   K
Sbjct: 948  NSGDFAKNVWKYFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPIFICWNLWK 1007

Query: 1734 IRNTLRHEETISTTKLIYQVLHTLIL-FMKVKRKLFKYA--PYRWESIVEALDRYFQQVK 1564
             R  +++    S    I +V H +IL   K+   +F Y   P RW      ++   Q  K
Sbjct: 1008 NRCAVKYGGKQSN---IARVKHLVILDNFKLLHTVFPYISWPLRWNKFCNVIENCSQDTK 1064

Query: 1563 ITTVVWKMPNRDRIKVNTDDASKDNPG 1483
            +T V W  P    +K+NTD ++  NPG
Sbjct: 1065 VTAVQWTKPPYRWVKLNTDGSALSNPG 1091



 Score =  120 bits (300), Expect = 4e-24
 Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 4/322 (1%)
 Frame = -2

Query: 2433 REKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAENDKWNEDM 2254
            + K+E  I  K+   +  F+ DNW G+G L          + T   V E     +WN + 
Sbjct: 481  KHKVEEHIQWKLNSGSCSFWWDNWLGVGPLARFSTDSNRLNNTT--VAEFLVEGQWNVNK 538

Query: 2253 MNEILPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKEPRKLYKQ 2074
            + +  P +  + IL+   Y V+ +  ++A WK+ + G FT  SA+  +++++        
Sbjct: 539  LIQQAPNDYLANILSTKFY-VQQEIPNQAIWKLNSDGNFTYSSAWNAIREKRTKTIFNTF 597

Query: 2073 MWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVFLLAPDG 1894
            +W K  P K SF +WR  + KLP N+KL  + ++  + +  C     + I H F      
Sbjct: 598  IWHKSIPFKTSFLLWRTLRGKLPTNEKLISFGNEPANCFCCCNRSGLDTIEHTFNKGQFA 657

Query: 1893 QLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIILWEF*KIRNTLR 1717
              + K F    GI   +  + Q++ +WW     +   + +    P  I W   K R   +
Sbjct: 658  TYLWKSFAAAAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQATPIFICWNLWKNRCASK 717

Query: 1716 H---EETISTTKLIYQVLHTLILFMKVKRKLFKYAPYRWESIVEALDRYFQQVKITTVVW 1546
            +   +  IS  K  Y +       M       K+ P  W  +++  +R     K+T V W
Sbjct: 718  YGGKQSNISRVK--YAIYKDNYKLMTTTFPQIKW-PSNWMELLQLGERCTHDTKVTMVKW 774

Query: 1545 KMPNRDRIKVNTDDASKDNPGR 1480
              P +  +K+NTD ++  NPGR
Sbjct: 775  IKPKKQWVKINTDGSALCNPGR 796


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score =  126 bits (316), Expect(2) = 3e-26
 Identities = 87/330 (26%), Positives = 152/330 (46%), Gaps = 8/330 (2%)
 Frame = -2

Query: 2448 KCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAENDK 2269
            K  K+R  +E+ I   +   N   + DNW G GAL +I+P    ++     VK+     +
Sbjct: 449  KMLKIRHSVENNILWIIYAGNVSMWWDNWMGNGALSNILPPPSHYNKD--NVKDFIHKRE 506

Query: 2268 WNEDMMNEILPEELASYILNHINYPV-EHKGSDKACWKIKARGKFTVGSAFQLLKQRKEP 2092
            W+ D +++ILP ++ + I   ++ P+ +   SD A W     G FT  SA+      +E 
Sbjct: 507  WDFDKLSDILPPQVVNQI---VSIPIGDPNQSDYAIWIPSENGHFTTKSAYVDCSNTREK 563

Query: 2091 RKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVF 1912
              +  ++W   FP K+SF  WR  + KLP  D + ++     S    C+N + E I+HVF
Sbjct: 564  NDMRNKIWHGKFPFKMSFLTWRLVQNKLPFYDTVGKFVDNIDSNCVCCKNMKTETINHVF 623

Query: 1911 LLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIILWEF*K 1735
            L +     + K F   +GID +      ++  WW++   + +   + H +P +I WE  K
Sbjct: 624  LNSDVASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPILIFWEIWK 683

Query: 1734 IRNTLRHEETISTTKLIYQVLHTLILFMKVKRKLFKYAP-----YRWESIVEALDRYFQQ 1570
             R   ++ +     K+ Y+ +   + +  +K  L    P       W  ++  ++     
Sbjct: 684  RRCACKYGD---QKKMWYRTMENHV-WWNLKMSLRMTFPSFEIGNSWRDLLNKVESLRPY 739

Query: 1569 VKITTVVWKMPNRDRIKVNTDDA-SKDNPG 1483
             K   V W  PN + +K+NTD + S  N G
Sbjct: 740  PKWKIVHWNTPNINCVKINTDGSFSSGNAG 769



 Score = 21.6 bits (44), Expect(2) = 3e-26
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 2497 HAVIVPQKNTGTYVWKKMLKVK 2432
            H V   + +  ++ W KMLK++
Sbjct: 433  HPVAKAKSSKQSHTWSKMLKIR 454


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score =  113 bits (282), Expect(2) = 4e-26
 Identities = 87/328 (26%), Positives = 154/328 (46%), Gaps = 4/328 (1%)
 Frame = -2

Query: 2451 RKCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAEND 2272
            R  ++ R K+E  I   +      F+ DNW  +  L          + +V  V +  ++ 
Sbjct: 858  RYLTRNRLKVESFIKWNITSGTCSFWWDNWLDIENLASQNEHISSLNNSV--VADFLKDG 915

Query: 2271 KWNEDMMNEILPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKEP 2092
            KWNE ++ + +   L   IL    +       D A W     G F++ SA++ +++++  
Sbjct: 916  KWNESLIRQQVTPLLVPKILQK-QFNFTAGKDDTATWMPTETGIFSIASAWECIRKKRII 974

Query: 2091 RKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVF 1912
              +   +W K  P KI+FF+WR  K KLP N+ L+R     +S Y  C     +DI+H+ 
Sbjct: 975  DNISTIIWHKHLPFKIAFFIWRALKGKLPTNEFLQRIGSD-ISDYSCCYRKGKDDINHIL 1033

Query: 1911 LLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIILWEF*K 1735
            +     + I K     +GI   N  +   +  W +  V +EV K + H++P II W   K
Sbjct: 1034 INGNFAKYIWKIHAATLGIIPVNTTLRAQLLHWRNQQVNNEVHKLLIHILPNIICWNLWK 1093

Query: 1734 IRNTLRHEETISTTKLIYQVLHTLIL-FMKVKRKLFKYAPYR--WESIVEALDRYFQQVK 1564
             R  +++ +  S+   I++V + +    M+V + +F   P++  W ++V  ++   QQ K
Sbjct: 1094 NRCAVKYGKKRSS---IHRVKYGIFKEVMQVIKLVFPSIPWQSNWNNLVNIIEHCSQQYK 1150

Query: 1563 ITTVVWKMPNRDRIKVNTDDASKDNPGR 1480
            I  V W  P     K+NTD ++  N G+
Sbjct: 1151 IVLVSWNKPALGTYKLNTDGSAIQNSGK 1178



 Score = 34.3 bits (77), Expect(2) = 4e-26
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
 Frame = -1

Query: 1462 VRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRNIIN 1283
            +RD  G I++A +  +   + TN   E  A L  + + +     +V +E +S LL N I 
Sbjct: 1185 LRDFQGKIVYAFS--IPFGVGTNNFAEIKAALYGMEWCEQHGYKKVELEVNSELLYNWIK 1242

Query: 1282 KIWKVSW-HXXXXXXXXXXXXXXXXXXIQHIYREGNKVVDHLS 1157
               K+ W +                    HIYRE N   D LS
Sbjct: 1243 NTTKIPWRYEDLVQQIQQISMKMEQFHCHHIYREANNTADLLS 1285


>gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
          Length = 1368

 Score =  111 bits (277), Expect(2) = 8e-26
 Identities = 78/325 (24%), Positives = 154/325 (47%), Gaps = 11/325 (3%)
 Frame = -2

Query: 2433 REKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAENDKWNEDM 2254
            R     +I  ++ + + +F+ D W G   L +  P++ +   +++ V     +D W+ D 
Sbjct: 881  RATASQQIRWRIGKGDIFFWHDAWMGDEPLVNSFPSFSQ---SMMKVNYFFNDDAWDVDK 937

Query: 2253 MNEILPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKEPRKLYKQ 2074
            +   +P  +   IL     P+  +  D A W + A G F++ SA++LL+QRK+   + + 
Sbjct: 938  LKTFIPNAIVEEILK---IPISREKEDIAYWALTANGDFSIKSAWELLRQRKQVNLVGQL 994

Query: 2073 MWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVFLLAPDG 1894
            +W K  P  +SFF+WR     LP+  ++K    Q  S+   C++   E + HV   +P  
Sbjct: 995  IWHKSIPLTVSFFLWRTLHNWLPVEVRMKAKGIQLASKCLCCKS--EESLLHVLWESPVA 1052

Query: 1893 QLI*KYFCRQVGIDIQN-LHITQVVNKWWDLPVKSEVKYVYHVVPAIILWEF*KIRNTLR 1717
            Q +  YF +   I + N  +I Q++N W+     ++  ++  ++   I W     RN  +
Sbjct: 1053 QQVWNYFSKFFQIYVHNPQNILQILNSWYYSGDFTKPGHIRTLILLFIFWFVWVERNDAK 1112

Query: 1716 HEET-ISTTKLIYQVLHTLILFMKVKRKLFK---YAPYRWESIVEALDRY------FQQV 1567
            H +  +   ++I+++       MK+ RKLF+      ++W+  ++    +       +Q 
Sbjct: 1113 HRDLGMYPDRIIWRI-------MKILRKLFQGGLLCKWQWKGDLDIAIHWGFNFAQERQA 1165

Query: 1566 KITTVVWKMPNRDRIKVNTDDASKD 1492
            +   + W  P    +K+N D +SKD
Sbjct: 1166 RPKIINWIKPLIGELKLNVDGSSKD 1190



 Score = 35.4 bits (80), Expect(2) = 8e-26
 Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 2/173 (1%)
 Frame = -1

Query: 1462 VRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRNIIN 1283
            +RD +G+++   ++        + Q E +A+   L        +RV IE D+ ++  +I 
Sbjct: 1201 LRDHTGNLIFGFSENFG--YQNSLQAELLALHRGLCLCMEYNVSRVWIEVDAQVVIQMIQ 1258

Query: 1282 KIWKVSWHXXXXXXXXXXXXXXXXXXIQHIYREGNKVVDHLSNVTLDSGNVMVNNFLELG 1103
               K S+                   I HI+REGN+  D LS       N+ V    +  
Sbjct: 1259 NHHKGSYKIQYLLESIRKCLQVISVRISHIHREGNQAADFLSKHGHTHQNLHVFTEAQGE 1318

Query: 1102 RQGRRLVNGDKLEGPYL--RIRKSSRSG*GKANRETKHILIFKSFGRRLVRIF 950
             +GR LVN  ++E P     +R  S+ G    + E +    FK+    L R F
Sbjct: 1319 LRGRTLVN--RVEHPRCLPELRPGSKPG---LDLEPESFYGFKAIVHSLPRTF 1366


>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
            lycopersicum]
          Length = 13995

 Score = 82.8 bits (203), Expect(2) = 9e-26
 Identities = 41/73 (56%), Positives = 53/73 (72%)
 Frame = -1

Query: 1489 PREKCMKFFVRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETD 1310
            PR     F VRDE GDIL A+ QE+ +   TNTQ EAMAIL AL++++ TQ +RV+I+TD
Sbjct: 3187 PRRSSWVFCVRDEQGDILQAQAQEIGELACTNTQAEAMAILQALKFIEATQMDRVVIKTD 3246

Query: 1309 SLLLRNIINKIWK 1271
            SLL  NI++K WK
Sbjct: 3247 SLLTNNIVDKSWK 3259



 Score = 63.5 bits (153), Expect(2) = 9e-26
 Identities = 27/74 (36%), Positives = 48/74 (64%)
 Frame = -2

Query: 1728 NTLRHEETISTTKLIYQVLHTLILFMKVKRKLFKYAPYRWESIVEALDRYFQQVKITTVV 1549
            N+   +  +S+++LI+Q++    L +K +R+  K+ PY W  +VEAL+ Y  + K+T V+
Sbjct: 3113 NSNARDIEMSSSRLIFQIIAYSGLLIKTRRRSRKHVPYNWRIVVEALNNYNLKAKVTKVI 3172

Query: 1548 WKMPNRDRIKVNTD 1507
            WK P+  +IK+ TD
Sbjct: 3173 WKAPDTGQIKIKTD 3186


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  114 bits (284), Expect(2) = 1e-24
 Identities = 77/320 (24%), Positives = 138/320 (43%), Gaps = 2/320 (0%)
 Frame = -2

Query: 2436 LREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAENDKWNED 2257
            +R+++E  I  ++Q  N  F+ DNW G G L          + +   V +  EN  WN  
Sbjct: 304  IRQQVEQHIQWQLQAGNCSFWWDNWMGTGPLAQHTCNNIRLNNS--KVADFWENGVWNYR 361

Query: 2256 MMNEILPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKEPRKLYK 2077
             + E  P    + I+  I  P +    D+  WK+ ++GKF+  SA++ ++ +K   +   
Sbjct: 362  KLVEQAPASQLANIMA-IAIPQQQYQQDQPVWKLHSQGKFSCHSAWEEIRNKKAKNRFLS 420

Query: 2076 QMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVFLLAPD 1897
             +W    P K SF +WR  K K+P N+KL  +  +    Y        + I+H+F     
Sbjct: 421  FLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIEPSPCYCCVDRAGMDSINHIFNTGNF 480

Query: 1896 GQLI*KYFCRQVGIDIQNLHITQVVNKWWDL-PVKSEVKYVYHVVPAIILWEF*KIRNTL 1720
               + K F    G+      +   + +WW      +  + +    P  I W   K R   
Sbjct: 481  AGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNLWKNRCAC 540

Query: 1719 RH-EETISTTKLIYQVLHTLILFMKVKRKLFKYAPYRWESIVEALDRYFQQVKITTVVWK 1543
            ++  +  + +++ Y V       MK      ++ P  W +++   ++     K+  VVW 
Sbjct: 541  KYGGKATNISRVKYAVYKDNFKMMKNAFPHIQW-PAHWTALIHTSEKCKHDTKVCQVVWN 599

Query: 1542 MPNRDRIKVNTDDASKDNPG 1483
             P  + IK+NTD ++  NPG
Sbjct: 600  RPPEEWIKINTDGSALTNPG 619



 Score = 28.9 bits (63), Expect(2) = 1e-24
 Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 6/150 (4%)
 Frame = -1

Query: 1462 VRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRNIIN 1283
            +R++ G ++ A    L +   +N + E  A L  L +        +I+E DS L+   I+
Sbjct: 627  IRNKEGKLVMAFATSLGE--GSNNKAETEAALIGLVHALELGYRNIIMELDSQLIVQWIS 684

Query: 1282 KI----WKVSWHXXXXXXXXXXXXXXXXXXIQHIYREGNKVVDHLSNVT--LDSGNVMVN 1121
            K     W VS                     QHI+RE N V D LS  +  + S  +  +
Sbjct: 685  KKSVHHWSVS---NQIERLQYLIMQTQNFKCQHIFREANWVADALSKHSHHITSPQLYFD 741

Query: 1120 NFLELGRQGRRLVNGDKLEGPYLRIRKSSR 1031
            +  +L ++       D L  P  R RK+ +
Sbjct: 742  S-NQLPKEANAYYRMDLLNMPSFRRRKTKK 770


>ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262707 [Solanum
            lycopersicum]
          Length = 764

 Score =  118 bits (295), Expect = 1e-23
 Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 7/301 (2%)
 Frame = -2

Query: 2433 REKIEHEIWLK--VQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAENDKWNE 2260
            R +IE E+ ++  +Q   S  + DNWTG GA+ +        +  V+   E   N KWNE
Sbjct: 471  RNRIEVEVHIRWHIQSGTSSLWWDNWTGNGAIANYCDHVSSLNNMVLA--ECLTNGKWNE 528

Query: 2259 DMMNEILPEELASYILNH-INYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKEPRKL 2083
              + + +P  L  +IL   INY  +    D A W  +  GKF++ SA+ +++++K    +
Sbjct: 529  RFIRQHVPAILIPHILQTCINY--KEGAEDTAIWLPEESGKFSIASAWDIIRRKKSTDYI 586

Query: 2082 YKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVFLLA 1903
               +W K  P KISFF+WR  K KLP ND L+ +        + C     +DI+H+    
Sbjct: 587  NTIIWHKYIPFKISFFIWRAIKGKLPTNDNLQIFGKP-AEECYCCYKQGKDDINHILSTG 645

Query: 1902 PDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIILWEF*KIRN 1726
                 I KY+ R++G+     +I  +   W +    ++V K ++ ++P II W   K R 
Sbjct: 646  HFANYIWKYYARKLGVIHLQTNIRSLFILWRNQHATNQVLKTLFQILPNIICWNLWKNRC 705

Query: 1725 TLRH-EETISTTKLIYQVLHTLILFMKVKRKLFKYAPYR--WESIVEALDRYFQQVKITT 1555
             +++  +  S  ++ Y +   ++  +KV   +F   P++   + ++   ++  QQ KIT 
Sbjct: 706  AVKYGNKRSSINRVQYGIYKDVMQIIKV---MFPIIPWQSSLDELINIAEKCHQQYKITV 762

Query: 1554 V 1552
            V
Sbjct: 763  V 763


>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 601

 Score =  107 bits (266), Expect(2) = 1e-23
 Identities = 85/325 (26%), Positives = 146/325 (44%), Gaps = 2/325 (0%)
 Frame = -2

Query: 2451 RKCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAEND 2272
            R  +K R K E  I   ++     F++DNW    +L +        + + +   +   + 
Sbjct: 126  RYLTKNRHKFESLIKWSIRSGTYSFWLDNWLENDSLANHCDHISSLNKSRLD--DFWIDG 183

Query: 2271 KWNEDMMNEILPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKEP 2092
            KWNE ++ + +P  L   IL  +    E K  D A W      KFT+ SA++++++++  
Sbjct: 184  KWNESLIRQHVPPLLIPIILQTLFNYNEGK-EDTAIWIPDETVKFTISSAWKVIRKKRSH 242

Query: 2091 RKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVF 1912
              +   +W K  P KISFF+W     KLP N+ L+R     +  Y  C +   +DI+H+ 
Sbjct: 243  DPINNIIWHKHIPFKISFFIWGALTGKLPTNEILQRLGRDIVDCY-CCYSKVKDDINHIL 301

Query: 1911 LLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIILWEF*K 1735
            L       I K     VG    N ++   +  W  L   +EV K + H +P II W   +
Sbjct: 302  LTGNFANYIWKKHASTVGALHVNTNMRSQLLYWRSLQTNNEVHKLLIHTLPNIICWNLWE 361

Query: 1734 IRNTLRH-EETISTTKLIYQVLHTLILFMKVKRKLFKYAPYRWESIVEALDRYFQQVKIT 1558
             R  +++  +  S  ++ Y +    +  +K++     +  Y W  ++  +D+  QQ KI 
Sbjct: 362  NRCAVKYGGKQSSIYRVQYGIFKDTMQIIKLEYSNIPW-QYSWGHLINFIDQCQQQYKIF 420

Query: 1557 TVVWKMPNRDRIKVNTDDASKDNPG 1483
             V W  P   R K+NTD +     G
Sbjct: 421  MVRWIKPTIGRYKLNTDGSCLQENG 445



 Score = 32.0 bits (71), Expect(2) = 1e-23
 Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
 Frame = -1

Query: 1462 VRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRNIIN 1283
            +RD  G I+ A          TN   +  A L  L + +      +++E DS LL   I+
Sbjct: 453  LRDHQGSIIFAFASPFA--FGTNNIAKLKAALYGLEWCEQHGYKDIVLEIDSELLSKWIS 510

Query: 1282 KIWKVSWHXXXXXXXXXXXXXXXXXXI-QHIYREGNKVVDHLS 1157
               ++ W                     QHIYRE N   D L+
Sbjct: 511  NTIQIPWRCQQYVQHIHEITKKLHHFQCQHIYREENSTADLLA 553


>ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244169 [Solanum
            lycopersicum]
          Length = 764

 Score =  115 bits (289), Expect = 7e-23
 Identities = 82/305 (26%), Positives = 149/305 (48%), Gaps = 5/305 (1%)
 Frame = -2

Query: 2451 RKCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAEND 2272
            R  ++ R ++E +I  ++Q   S  + DNWTG GA+ +        +  V+   E   N 
Sbjct: 467  RYLTRNRIEVEVQIRWQIQSGTSNLWWDNWTGNGAIANYCDHVSSLNNMVLA--ECLTNG 524

Query: 2271 KWNEDMMNEILPEELASYILNH-INYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKE 2095
            KWNE  + + +P  L  +IL   INY  +    D A W  +  GKF++ SA+ +++++K 
Sbjct: 525  KWNERFIRQHVPAILIPHILQTCINY--KEGDEDNAIWLPEESGKFSIASAWDIIRRKKS 582

Query: 2094 PRKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHV 1915
               +   +W K  P KISFF+WR  + KLP ND L+ +        + C     +DI+H+
Sbjct: 583  TDYINTIIWHKYIPFKISFFIWRAIRGKLPTNDSLQIFGKP-AEECYCCYKQGKDDINHI 641

Query: 1914 FLLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIILWEF* 1738
                     I KY+ R++G+     +I  +  +W +    ++V K ++ ++P II W   
Sbjct: 642  LSTGHFANYIWKYYARKLGVIHLQTNIRSLFIQWRNQHATNQVLKTLFQILPNIICWNLW 701

Query: 1737 KIRNTLRH-EETISTTKLIYQVLHTLILFMKVKRKLFKYAPYR--WESIVEALDRYFQQV 1567
            K R  +++  +  S  +  Y +   ++  +KV   +F   P++   + ++   ++  QQ 
Sbjct: 702  KNRCAVKYGNKRSSINRAQYGIYKDVMQIIKV---MFPIIPWQSSLDELINIAEKCHQQY 758

Query: 1566 KITTV 1552
            KI  V
Sbjct: 759  KIIVV 763


>ref|XP_004229073.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 474

 Score =  115 bits (287), Expect = 1e-22
 Identities = 72/271 (26%), Positives = 142/271 (52%), Gaps = 3/271 (1%)
 Frame = -2

Query: 2451 RKCSKLREKIEHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAEND 2272
            R  ++ REK+E  I+ ++  ++  F+ DNW G G+L +    Y       I V      D
Sbjct: 195  RYLTRNREKVEQLIYWQIHSDSCKFWWDNWLGNGSLTNYC--YNISSLNNISVSTFLAED 252

Query: 2271 KWNEDMMNEILPEELASYILN-HINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKE 2095
            KWNE ++ + +P+EL   IL  +INY      +D A W  +  GKF++ SA++ +++++ 
Sbjct: 253  KWNERVVRQHVPQELVPTILQTYINYKTGI--ADTAIWIPEESGKFSIASAWETIRKKRN 310

Query: 2094 PRKLYKQMWIKGFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHV 1915
               +   +W K  P K++FF+WR  + KLP N+ L++   +  +  F C +   +DI+H+
Sbjct: 311  IDPINNMVWHKKIPFKVAFFIWRALRRKLPTNEMLQKIS-KAEADCFCCYSKGKDDINHI 369

Query: 1914 FLLAPDGQLI*KYFCRQVGIDIQNLHITQVVNKWWDLPVKSEV-KYVYHVVPAIILWEF* 1738
             +     + I KY   +VG   + +++  ++  W +L  ++E  K + +++P  I W   
Sbjct: 370  LITGHFARYISKYHAVKVGAVQEQINLRSLLLYWSNLSTQNEEHKLLIYILPNFICWNLW 429

Query: 1737 KIRNTLRH-EETISTTKLIYQVLHTLILFMK 1648
            K R  +++  +T S  ++ Y +   ++  ++
Sbjct: 430  KNRCAVKYGGKTSSIQRVQYGIFKDIMKLLR 460


>gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]
          Length = 2215

 Score =  102 bits (253), Expect(2) = 2e-22
 Identities = 76/324 (23%), Positives = 140/324 (43%), Gaps = 8/324 (2%)
 Frame = -2

Query: 2421 EHEIWLKVQQENSYFYMDNWTGLGALYHIIPTYFEWDPTVIPVKEVAENDKWNEDMMNEI 2242
            E  I  ++     +F+ D W G   L +    +     ++  V +   N+ WN + +  +
Sbjct: 1764 EQNIRWRIGHGELFFWHDCWMGEEPLVNRNQAFAS---SMAQVSDFFLNNSWNVEKLKTV 1820

Query: 2241 LPEELASYILNHINYPVEHKGSDKACWKIKARGKFTVGSAFQLLKQRKEPRKLYKQMWIK 2062
            L +E+   I   +  P++   +DKA W     G F+  SA+QL++ RK    ++  +W K
Sbjct: 1821 LQQEVVEEI---VKIPIDTSSNDKAYWTTTPNGDFSTKSAWQLIRNRKVENPVFNFIWHK 1877

Query: 2061 GFPTKISFFMWRFWKFKLPLNDKLKRWEHQFLSRYFYCQNPENEDISHVFLLAPDGQLI* 1882
              P   SFF+WR     +P+  K+K    Q  SR   C++   E + HV    P    + 
Sbjct: 1878 SVPLTTSFFLWRLLHDWIPVELKMKTKGFQLASRCRCCKS--EESLMHVMWKNPVANQVW 1935

Query: 1881 KYFCRQVGIDIQN-LHITQVVNKWWDLPVKSEVKYVYHVVPAIILWEF*KIRNTLRHEET 1705
             YF +   I I N   I Q++  W+     S+  ++  +VP   LW     RN  +H   
Sbjct: 1936 SYFAKVFQIQIINPCTINQIICAWFYSGDYSKPGHIRTLVPLFTLWFLWVERNDAKHRNL 1995

Query: 1704 -ISTTKLIYQVLHTLILFMKVKRKLFKYAPYRWESIVEALDRYFQQVKITT------VVW 1546
             +   ++++++L  L    + K    +   ++W+   +    +   +K         + W
Sbjct: 1996 GMYPNRVVWKILKLLHQLFQGK----QLQKWQWQGDKQIAQEWGIILKADAPSPPKLLFW 2051

Query: 1545 KMPNRDRIKVNTDDASKDNPGRSA 1474
              P+   +K+N D + K NP  +A
Sbjct: 2052 LKPSIGELKLNVDGSCKHNPQSAA 2075



 Score = 33.5 bits (75), Expect(2) = 2e-22
 Identities = 34/140 (24%), Positives = 59/140 (42%)
 Frame = -1

Query: 1462 VRDESGDILHAKTQELEDPLSTNTQVEAMAIL*ALRYLDNTQENRVIIETDSLLLRNIIN 1283
            +RD +G ++   ++        + Q E MA+   L        +R+ IE D+ +   +I 
Sbjct: 2080 LRDHTGSMIFGFSENFGP--QDSLQAELMALHRGLLLCIEHNISRLWIEMDAKVAVQMIK 2137

Query: 1282 KIWKVSWHXXXXXXXXXXXXXXXXXXIQHIYREGNKVVDHLSNVTLDSGNVMVNNFLELG 1103
            +  + S                    I HI+REGN+  DHLSN      N+ V +  E  
Sbjct: 2138 EGHQGSSRTRYLLASIHRCLSGISFRISHIFREGNQAADHLSNQGHTHQNLQVISQAE-- 2195

Query: 1102 RQGRRLVNGDKLEGPYLRIR 1043
             Q R ++  +K+   Y+R +
Sbjct: 2196 GQLRGILRLEKINLAYVRFK 2215