BLASTX nr result
ID: Atropa21_contig00018587
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00018587
(820 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347058.1| PREDICTED: general transcription factor IIH ... 205 8e-64
ref|XP_004232855.1| PREDICTED: general transcription factor IIH ... 201 2e-62
emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera] 179 3e-54
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ... 171 2e-52
ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription f... 171 2e-52
gb|EOY28279.1| Transcription factor-related isoform 1 [Theobroma... 168 1e-51
gb|EOY28282.1| Transcription factor-related isoform 4 [Theobroma... 168 1e-51
gb|EMJ15015.1| hypothetical protein PRUPE_ppa005553mg [Prunus pe... 162 4e-49
gb|ESW31311.1| hypothetical protein PHAVU_002G227900g [Phaseolus... 159 7e-48
gb|EXB82782.1| General transcription factor IIH subunit 4 [Morus... 156 4e-47
ref|NP_001190745.1| transcription factor-related protein [Arabid... 154 6e-47
ref|NP_974564.1| transcription factor-related protein [Arabidops... 154 6e-47
dbj|BAD43671.1| unnamed protein product [Arabidopsis thaliana] 154 6e-47
ref|NP_193435.2| transcription factor-related protein [Arabidops... 154 6e-47
ref|XP_002868091.1| hypothetical protein ARALYDRAFT_493174 [Arab... 153 9e-47
ref|XP_006414285.1| hypothetical protein EUTSA_v10025179mg [Eutr... 155 1e-46
ref|XP_006827784.1| hypothetical protein AMTR_s00009p00265760 [A... 160 2e-46
ref|XP_003601071.1| General transcription factor IIH subunit [Me... 154 2e-46
ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general tran... 150 4e-46
ref|XP_003542754.1| PREDICTED: general transcription factor IIH ... 157 5e-46
>ref|XP_006347058.1| PREDICTED: general transcription factor IIH subunit 4-like [Solanum
tuberosum]
Length = 453
Score = 205 bits (521), Expect(3) = 8e-64
Identities = 98/107 (91%), Positives = 103/107 (96%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+LYIDIPI+AKSMEEWVLPDGFSKHKVAIDRLIQLRVM ETFDRKKE+TYQ
Sbjct: 42 PLAKKYVLQMLYIDIPITAKSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEATYQ 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNPKFQ NLQKHIVHGG+LPREPMPSNITVRLPSLEELEAYA+EQWE
Sbjct: 102 LNPKFQFNLQKHIVHGGILPREPMPSNITVRLPSLEELEAYAVEQWE 148
Score = 55.5 bits (132), Expect(3) = 8e-64
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
P +KLDMLYDNSFICEAILRSLPPLAK+
Sbjct: 19 PVMKLDMLYDNSFICEAILRSLPPLAKK 46
Score = 32.0 bits (71), Expect(3) = 8e-64
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKIVARNFMDM
Sbjct: 1 MPQVKIVARNFMDM 14
>ref|XP_004232855.1| PREDICTED: general transcription factor IIH subunit 4-like [Solanum
lycopersicum]
Length = 453
Score = 201 bits (510), Expect(3) = 2e-62
Identities = 97/107 (90%), Positives = 102/107 (95%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+LYIDIPI+AKSMEEWVLPDGFSKHKVAIDRLIQLRVM ETFDRKKE+ YQ
Sbjct: 42 PLAKKYVLQMLYIDIPITAKSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYQ 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNPKFQ NLQKHIV+GGVLPREPMPSNITVRLPSLEELEAYA+EQWE
Sbjct: 102 LNPKFQFNLQKHIVYGGVLPREPMPSNITVRLPSLEELEAYAVEQWE 148
Score = 55.5 bits (132), Expect(3) = 2e-62
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
P +KLDMLYDNSFICEAILRSLPPLAK+
Sbjct: 19 PVMKLDMLYDNSFICEAILRSLPPLAKK 46
Score = 32.0 bits (71), Expect(3) = 2e-62
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKIVARNFMDM
Sbjct: 1 MPQVKIVARNFMDM 14
>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
Length = 451
Score = 179 bits (454), Expect(3) = 3e-54
Identities = 82/107 (76%), Positives = 98/107 (91%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKY+LQ+LYID+P++AK+MEEWVL DGFSKH+VAIDRLIQLRV ET DRKKE++Y+
Sbjct: 42 PLAKKYILQMLYIDVPVTAKAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYR 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NLQKH+++GGVLPREPMPSNITVRLPSL++LEAYA+ QWE
Sbjct: 102 LNPTFQTNLQKHLIYGGVLPREPMPSNITVRLPSLDDLEAYALGQWE 148
Score = 50.8 bits (120), Expect(3) = 3e-54
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY N+FICEAILRSLPPLAK+
Sbjct: 19 PAMKLDALYHNTFICEAILRSLPPLAKK 46
Score = 30.4 bits (67), Expect(3) = 3e-54
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKI+A+NFMDM
Sbjct: 1 MPQVKIIAKNFMDM 14
>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
sativus]
Length = 451
Score = 171 bits (433), Expect(3) = 2e-52
Identities = 82/107 (76%), Positives = 95/107 (88%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KK+VLQ+LYID P+SAKSMEEWVLPDG SK+KVA+DRLIQLRV ET DRK+E+TY+
Sbjct: 42 PLAKKFVLQMLYIDGPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYR 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NLQK ++HG VL REPMPSNITVRLPSLE+LEAYA++QWE
Sbjct: 102 LNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWE 148
Score = 52.4 bits (124), Expect(3) = 2e-52
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY+N+FICEAILRSLPPLAK+
Sbjct: 19 PAMKLDQLYENAFICEAILRSLPPLAKK 46
Score = 30.4 bits (67), Expect(3) = 2e-52
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKI+A+NFMDM
Sbjct: 1 MPQVKIIAKNFMDM 14
>ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like,
partial [Cucumis sativus]
Length = 296
Score = 171 bits (433), Expect(3) = 2e-52
Identities = 82/107 (76%), Positives = 95/107 (88%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KK+VLQ+LYID P+SAKSMEEWVLPDG SK+KVA+DRLIQLRV ET DRK+E+TY+
Sbjct: 42 PLAKKFVLQMLYIDGPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYR 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NLQK ++HG VL REPMPSNITVRLPSLE+LEAYA++QWE
Sbjct: 102 LNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWE 148
Score = 52.4 bits (124), Expect(3) = 2e-52
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY+N+FICEAILRSLPPLAK+
Sbjct: 19 PAMKLDQLYENAFICEAILRSLPPLAKK 46
Score = 30.4 bits (67), Expect(3) = 2e-52
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKI+A+NFMDM
Sbjct: 1 MPQVKIIAKNFMDM 14
>gb|EOY28279.1| Transcription factor-related isoform 1 [Theobroma cacao]
Length = 451
Score = 168 bits (426), Expect(3) = 1e-51
Identities = 78/107 (72%), Positives = 96/107 (89%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+LYID+P++AKS+EEWVL DG SKHKVAIDRLIQLR++ E DRKKE++Y+
Sbjct: 42 PLAKKYVLQMLYIDVPVTAKSLEEWVLADGSSKHKVAIDRLIQLRIL-EVIDRKKETSYK 100
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NL+KH+++GG+LPREPMPSN+TVRLP+ EEL+AYA EQWE
Sbjct: 101 LNPTFQTNLRKHLIYGGILPREPMPSNVTVRLPTSEELDAYAHEQWE 147
Score = 52.4 bits (124), Expect(3) = 1e-51
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLDMLY N FICEAILRS+PPLAK+
Sbjct: 19 PAIKLDMLYRNQFICEAILRSMPPLAKK 46
Score = 30.4 bits (67), Expect(3) = 1e-51
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKI+A+NFMDM
Sbjct: 1 MPQVKIIAKNFMDM 14
>gb|EOY28282.1| Transcription factor-related isoform 4 [Theobroma cacao]
Length = 445
Score = 168 bits (426), Expect(3) = 1e-51
Identities = 78/107 (72%), Positives = 96/107 (89%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+LYID+P++AKS+EEWVL DG SKHKVAIDRLIQLR++ E DRKKE++Y+
Sbjct: 42 PLAKKYVLQMLYIDVPVTAKSLEEWVLADGSSKHKVAIDRLIQLRIL-EVIDRKKETSYK 100
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NL+KH+++GG+LPREPMPSN+TVRLP+ EEL+AYA EQWE
Sbjct: 101 LNPTFQTNLRKHLIYGGILPREPMPSNVTVRLPTSEELDAYAHEQWE 147
Score = 52.4 bits (124), Expect(3) = 1e-51
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLDMLY N FICEAILRS+PPLAK+
Sbjct: 19 PAIKLDMLYRNQFICEAILRSMPPLAKK 46
Score = 30.4 bits (67), Expect(3) = 1e-51
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKI+A+NFMDM
Sbjct: 1 MPQVKIIAKNFMDM 14
>gb|EMJ15015.1| hypothetical protein PRUPE_ppa005553mg [Prunus persica]
Length = 455
Score = 162 bits (409), Expect(3) = 4e-49
Identities = 76/107 (71%), Positives = 93/107 (86%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+L I++P++AKSMEEWVLPDG SKH+VAIDRLIQLR+ ET DRK+E+TY
Sbjct: 42 PLAKKYVLQMLCIEVPVTAKSMEEWVLPDGVSKHRVAIDRLIQLRIFTETVDRKRETTYT 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NL+K +++G VLPREPMPSN+TVRLPS E+LEA+A+ QWE
Sbjct: 102 LNPIFQTNLKKLLLYGVVLPREPMPSNVTVRLPSSEDLEAFALGQWE 148
Score = 52.0 bits (123), Expect(3) = 4e-49
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY+N+FICEAILRSLPPLAK+
Sbjct: 19 PAMKLDKLYENAFICEAILRSLPPLAKK 46
Score = 29.3 bits (64), Expect(3) = 4e-49
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQV+I+A+NFMDM
Sbjct: 1 MPQVRIIAKNFMDM 14
>gb|ESW31311.1| hypothetical protein PHAVU_002G227900g [Phaseolus vulgaris]
Length = 451
Score = 159 bits (402), Expect(3) = 7e-48
Identities = 78/130 (60%), Positives = 97/130 (74%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYV+Q+L ID+P++AK +EEWVLPDG SKH+VA+DRL+QLRV E DRK E TY+
Sbjct: 42 PLAKKYVIQMLQIDVPVAAKLLEEWVLPDGVSKHRVAVDRLVQLRVFLEAVDRKNEKTYK 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWEPEYNFGNSFYDLQ 34
+NP +Q +LQK +V GG LPRE MPSNITVRLP+LE LEAYA+EQWE ++ LQ
Sbjct: 102 VNPTYQRSLQKLLVQGGTLPRESMPSNITVRLPTLENLEAYALEQWE--------WFLLQ 153
Query: 33 LSQPVLSAAP 4
L P + P
Sbjct: 154 LISPAQADKP 163
Score = 51.6 bits (122), Expect(3) = 7e-48
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY+N FICEAILRSLPPLAK+
Sbjct: 19 PAMKLDKLYENGFICEAILRSLPPLAKK 46
Score = 28.1 bits (61), Expect(3) = 7e-48
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MP+V+I+A+NFMDM
Sbjct: 1 MPEVRIIAKNFMDM 14
>gb|EXB82782.1| General transcription factor IIH subunit 4 [Morus notabilis]
Length = 431
Score = 156 bits (394), Expect(3) = 4e-47
Identities = 76/107 (71%), Positives = 90/107 (84%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+L ID PISAKSM+EWVL DG SKHKVA+DRL+QLR+ ET DRK+E++Y+
Sbjct: 42 PLAKKYVLQMLCIDGPISAKSMQEWVLADGASKHKVAVDRLLQLRIFTETVDRKRETSYR 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NLQK +V G VLP EP+PS+IT RLPSLEEL+ +AIEQWE
Sbjct: 102 LNPVFQSNLQKLLVSGEVLPGEPLPSSITARLPSLEELDVFAIEQWE 148
Score = 50.8 bits (120), Expect(3) = 4e-47
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY N+FICEAILRSLPPLAK+
Sbjct: 19 PAMKLDNLYSNAFICEAILRSLPPLAKK 46
Score = 29.3 bits (64), Expect(3) = 4e-47
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQV+I+A+NFMDM
Sbjct: 1 MPQVRIIAKNFMDM 14
>ref|NP_001190745.1| transcription factor-related protein [Arabidopsis thaliana]
gi|332658440|gb|AEE83840.1| transcription factor-related
protein [Arabidopsis thaliana]
Length = 482
Score = 154 bits (389), Expect(3) = 6e-47
Identities = 72/107 (67%), Positives = 88/107 (82%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+LYID+P+ A MEEWVL DG SKH+VAIDRLIQLR+ +E DRK+ ++Y
Sbjct: 42 PLAKKYVLQMLYIDVPVPATMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYS 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NLQKHI+ GGVLPREPM S+ ++LPSL+ELE YA++QWE
Sbjct: 102 LNPTFQNNLQKHIISGGVLPREPMNSDNAIKLPSLQELETYALKQWE 148
Score = 51.2 bits (121), Expect(3) = 6e-47
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY+N FICEAILRSLPPLAK+
Sbjct: 19 PAIKLDKLYNNVFICEAILRSLPPLAKK 46
Score = 30.4 bits (67), Expect(3) = 6e-47
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKI+A+NFMDM
Sbjct: 1 MPQVKIIAKNFMDM 14
>ref|NP_974564.1| transcription factor-related protein [Arabidopsis thaliana]
gi|332658438|gb|AEE83838.1| transcription factor-related
protein [Arabidopsis thaliana]
Length = 462
Score = 154 bits (389), Expect(3) = 6e-47
Identities = 72/107 (67%), Positives = 88/107 (82%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+LYID+P+ A MEEWVL DG SKH+VAIDRLIQLR+ +E DRK+ ++Y
Sbjct: 42 PLAKKYVLQMLYIDVPVPATMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYS 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NLQKHI+ GGVLPREPM S+ ++LPSL+ELE YA++QWE
Sbjct: 102 LNPTFQNNLQKHIISGGVLPREPMNSDNAIKLPSLQELETYALKQWE 148
Score = 51.2 bits (121), Expect(3) = 6e-47
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY+N FICEAILRSLPPLAK+
Sbjct: 19 PAIKLDKLYNNVFICEAILRSLPPLAKK 46
Score = 30.4 bits (67), Expect(3) = 6e-47
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKI+A+NFMDM
Sbjct: 1 MPQVKIIAKNFMDM 14
>dbj|BAD43671.1| unnamed protein product [Arabidopsis thaliana]
Length = 452
Score = 154 bits (389), Expect(3) = 6e-47
Identities = 72/107 (67%), Positives = 88/107 (82%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+LYID+P+ A MEEWVL DG SKH+VAIDRLIQLR+ +E DRK+ ++Y
Sbjct: 42 PLAKKYVLQMLYIDVPVPATMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYS 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NLQKHI+ GGVLPREPM S+ ++LPSL+ELE YA++QWE
Sbjct: 102 LNPTFQNNLQKHIISGGVLPREPMNSDNAIKLPSLQELETYALKQWE 148
Score = 51.2 bits (121), Expect(3) = 6e-47
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY+N FICEAILRSLPPLAK+
Sbjct: 19 PAIKLDKLYNNVFICEAILRSLPPLAKK 46
Score = 30.4 bits (67), Expect(3) = 6e-47
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKI+A+NFMDM
Sbjct: 1 MPQVKIIAKNFMDM 14
>ref|NP_193435.2| transcription factor-related protein [Arabidopsis thaliana]
gi|51969678|dbj|BAD43531.1| unnamed protein product
[Arabidopsis thaliana] gi|115646777|gb|ABJ17114.1|
At4g17020 [Arabidopsis thaliana]
gi|332658439|gb|AEE83839.1| transcription factor-related
protein [Arabidopsis thaliana]
Length = 452
Score = 154 bits (389), Expect(3) = 6e-47
Identities = 72/107 (67%), Positives = 88/107 (82%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+LYID+P+ A MEEWVL DG SKH+VAIDRLIQLR+ +E DRK+ ++Y
Sbjct: 42 PLAKKYVLQMLYIDVPVPATMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYS 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NLQKHI+ GGVLPREPM S+ ++LPSL+ELE YA++QWE
Sbjct: 102 LNPTFQNNLQKHIISGGVLPREPMNSDNAIKLPSLQELETYALKQWE 148
Score = 51.2 bits (121), Expect(3) = 6e-47
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY+N FICEAILRSLPPLAK+
Sbjct: 19 PAIKLDKLYNNVFICEAILRSLPPLAKK 46
Score = 30.4 bits (67), Expect(3) = 6e-47
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKI+A+NFMDM
Sbjct: 1 MPQVKIIAKNFMDM 14
>ref|XP_002868091.1| hypothetical protein ARALYDRAFT_493174 [Arabidopsis lyrata subsp.
lyrata] gi|297313927|gb|EFH44350.1| hypothetical protein
ARALYDRAFT_493174 [Arabidopsis lyrata subsp. lyrata]
Length = 452
Score = 153 bits (387), Expect(3) = 9e-47
Identities = 72/107 (67%), Positives = 88/107 (82%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+LYI++P+ A MEEWVL DG SKH+VAIDRLIQLR+ +ET DRK+ +Y
Sbjct: 42 PLAKKYVLQMLYINVPVPAAMMEEWVLADGASKHRVAIDRLIQLRIFSETSDRKRGISYS 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NLQKHI+ GGVLPREPM S+ ++LPSL+ELE YA++QWE
Sbjct: 102 LNPTFQNNLQKHIISGGVLPREPMHSDNAIKLPSLQELETYALKQWE 148
Score = 51.2 bits (121), Expect(3) = 9e-47
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY+N FICEAILRSLPPLAK+
Sbjct: 19 PAIKLDKLYNNVFICEAILRSLPPLAKK 46
Score = 30.4 bits (67), Expect(3) = 9e-47
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKI+A+NFMDM
Sbjct: 1 MPQVKIIAKNFMDM 14
>ref|XP_006414285.1| hypothetical protein EUTSA_v10025179mg [Eutrema salsugineum]
gi|557115455|gb|ESQ55738.1| hypothetical protein
EUTSA_v10025179mg [Eutrema salsugineum]
Length = 452
Score = 155 bits (392), Expect(3) = 1e-46
Identities = 72/107 (67%), Positives = 86/107 (80%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQLLY D+P+ A +EEWVL DG SKH+ AIDR+IQLR+ ET DRKK ++Y
Sbjct: 42 PLAKKYVLQLLYTDVPVPATMLEEWVLADGVSKHRAAIDRMIQLRIFMETTDRKKGTSYS 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NLQKHI+ GGVLPREPM SN ++LPSL+ELE YA++QWE
Sbjct: 102 LNPTFQKNLQKHIISGGVLPREPMNSNNAIKLPSLQELETYALQQWE 148
Score = 48.5 bits (114), Expect(3) = 1e-46
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = -1
Query: 460 AVKLDMLYDNSFICEAILRSLPPLAKE 380
A+KLD LY+N FICEAILRSLPPLAK+
Sbjct: 20 AIKLDKLYNNVFICEAILRSLPPLAKK 46
Score = 30.8 bits (68), Expect(3) = 1e-46
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -3
Query: 506 MPQVKIVARNFMDMAGCET 450
MPQVKI+A+NFMDM T
Sbjct: 1 MPQVKIIAKNFMDMVASLT 19
>ref|XP_006827784.1| hypothetical protein AMTR_s00009p00265760 [Amborella trichopoda]
gi|548832404|gb|ERM95200.1| hypothetical protein
AMTR_s00009p00265760 [Amborella trichopoda]
Length = 469
Score = 160 bits (405), Expect(3) = 2e-46
Identities = 73/107 (68%), Positives = 92/107 (85%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P K YVL++LYID +SAK M+EWVLPD FSKHK AIDRL+QLRV E+ DRK+E +Y+
Sbjct: 42 PVSKMYVLRMLYIDAAVSAKLMQEWVLPDSFSKHKAAIDRLLQLRVFTESIDRKREISYR 101
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNPK+Q NL+K++VHGG L REPMPS++TVRLP+LEEL+AYA++QWE
Sbjct: 102 LNPKYQENLRKYLVHGGTLSREPMPSSVTVRLPTLEELDAYALQQWE 148
Score = 45.1 bits (105), Expect(3) = 2e-46
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAK 383
PA KLD LY N+F CEA+LRSLPP++K
Sbjct: 19 PASKLDSLYTNTFFCEAVLRSLPPVSK 45
Score = 28.9 bits (63), Expect(3) = 2e-46
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MPQVKIV +NFMDM
Sbjct: 1 MPQVKIVPKNFMDM 14
>ref|XP_003601071.1| General transcription factor IIH subunit [Medicago truncatula]
gi|355490119|gb|AES71322.1| General transcription factor
IIH subunit [Medicago truncatula]
Length = 452
Score = 154 bits (390), Expect(3) = 2e-46
Identities = 76/108 (70%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFD-RKKESTY 217
P KKYVLQLL+ID P+ AK + EWVLPDG SKHKVAIDRL+QLRV E FD RK E TY
Sbjct: 42 PLAKKYVLQLLHIDGPVPAKLLAEWVLPDGLSKHKVAIDRLVQLRVFVEAFDNRKNEKTY 101
Query: 216 QLNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
Q+N +Q +LQ +VHGG LPRE MPSNITVRLP+LE+LE YA+EQWE
Sbjct: 102 QVNSTYQKSLQNLLVHGGTLPRESMPSNITVRLPTLEDLETYALEQWE 149
Score = 51.6 bits (122), Expect(3) = 2e-46
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY N FICEAILRSLPPLAK+
Sbjct: 19 PAIKLDKLYQNGFICEAILRSLPPLAKK 46
Score = 28.1 bits (61), Expect(3) = 2e-46
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MP+V+I+A+NFMDM
Sbjct: 1 MPEVRIIAKNFMDM 14
>ref|XP_004294031.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIH
subunit 4-like [Fragaria vesca subsp. vesca]
Length = 453
Score = 150 bits (379), Expect(3) = 4e-46
Identities = 72/107 (67%), Positives = 89/107 (83%)
Frame = -2
Query: 393 P*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTYQ 214
P KKYVLQ+L ++ P+++KSMEEWVLPDG SKH+VA+DRL+QLR+ ET +K + TY
Sbjct: 42 PLAKKYVLQMLCVEFPVNSKSMEEWVLPDGASKHRVAVDRLVQLRIFTET-RKKGDVTYT 100
Query: 213 LNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
LNP FQ NL K +V+G VLPREPMPSN+TVRLPS EELEA+A+EQWE
Sbjct: 101 LNPIFQTNLNKLLVYGVVLPREPMPSNVTVRLPSSEELEAFALEQWE 147
Score = 54.7 bits (130), Expect(3) = 4e-46
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LYDNSFICEAILRSLPPLAK+
Sbjct: 19 PAMKLDKLYDNSFICEAILRSLPPLAKK 46
Score = 28.1 bits (61), Expect(3) = 4e-46
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MP+V+I+A+NFMDM
Sbjct: 1 MPEVRIIAKNFMDM 14
>ref|XP_003542754.1| PREDICTED: general transcription factor IIH subunit 4-like isoform
X1 [Glycine max]
Length = 451
Score = 157 bits (396), Expect(3) = 5e-46
Identities = 74/108 (68%), Positives = 89/108 (82%)
Frame = -2
Query: 396 LP*RKKYVLQLLYIDIPISAKSMEEWVLPDGFSKHKVAIDRLIQLRVMAETFDRKKESTY 217
LP KKYV+Q+L+ID+ ++AK +EEWVLP G SKH+VAIDRL+QLRV E DRK E TY
Sbjct: 41 LPLAKKYVIQMLHIDVSVAAKLLEEWVLPGGVSKHRVAIDRLVQLRVFLEAVDRKNEKTY 100
Query: 216 QLNPKFQLNLQKHIVHGGVLPREPMPSNITVRLPSLEELEAYAIEQWE 73
++NP FQ +LQK +V GG LPRE MPSNITVRLP+LE LEAYA+EQWE
Sbjct: 101 KVNPTFQRSLQKLLVQGGTLPRESMPSNITVRLPTLENLEAYALEQWE 148
Score = 47.8 bits (112), Expect(3) = 5e-46
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = -1
Query: 463 PAVKLDMLYDNSFICEAILRSLPPLAKE 380
PA+KLD LY+N FICEAILRSL PLAK+
Sbjct: 19 PAMKLDKLYENGFICEAILRSLLPLAKK 46
Score = 28.1 bits (61), Expect(3) = 5e-46
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3
Query: 506 MPQVKIVARNFMDM 465
MP+V+I+A+NFMDM
Sbjct: 1 MPEVRIIAKNFMDM 14