BLASTX nr result
ID: Atropa21_contig00018403
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00018403
(653 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002457888.1| hypothetical protein SORBIDRAFT_03g018841 [S... 78 2e-12
ref|XP_002489309.1| hypothetical protein SORBIDRAFT_0010s008890 ... 76 1e-11
ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 ... 75 1e-11
ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787 [S... 75 1e-11
ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427 [S... 75 1e-11
ref|NP_001061315.2| Os08g0236200 [Oryza sativa Japonica Group] g... 75 2e-11
gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon po... 74 3e-11
ref|XP_002440449.1| hypothetical protein SORBIDRAFT_09g001135 [S... 74 3e-11
ref|XP_002444329.1| hypothetical protein SORBIDRAFT_07g020255 [S... 74 3e-11
ref|XP_002453623.1| hypothetical protein SORBIDRAFT_04g009135 [S... 74 3e-11
gb|ABB47941.2| retrotransposon protein, putative, unclassified [... 74 3e-11
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat... 74 3e-11
ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777... 74 4e-11
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 74 4e-11
ref|XP_004954684.1| PREDICTED: ent-cassadiene C2-hydroxylase-lik... 74 5e-11
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza... 73 6e-11
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc... 72 1e-10
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc... 71 2e-10
emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group] 71 2e-10
ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [S... 70 4e-10
>ref|XP_002457888.1| hypothetical protein SORBIDRAFT_03g018841 [Sorghum bicolor]
gi|241929863|gb|EES03008.1| hypothetical protein
SORBIDRAFT_03g018841 [Sorghum bicolor]
Length = 787
Score = 78.2 bits (191), Expect = 2e-12
Identities = 36/63 (57%), Positives = 44/63 (69%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRS PCVFLGYPS+H+GY+C D+++ +IIISRHVIF E+ F
Sbjct: 203 VFGCLYYPNLTATTPHKLAPRSAPCVFLGYPSSHKGYRCVDMATHRIIISRHVIFNESVF 262
Query: 472 LFS 464
FS
Sbjct: 263 PFS 265
>ref|XP_002489309.1| hypothetical protein SORBIDRAFT_0010s008890 [Sorghum bicolor]
gi|241946957|gb|EES20102.1| hypothetical protein
SORBIDRAFT_0010s008890 [Sorghum bicolor]
Length = 1017
Score = 75.9 bits (185), Expect = 1e-11
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG +KL PRS PCVFLGYP++HRGY+CYD+ ++++I SRHV+F E+ F
Sbjct: 170 VFGSLCFPNQTTTAANKLCPRSVPCVFLGYPADHRGYRCYDMETRRVITSRHVVFDESQF 229
Query: 472 LF 467
F
Sbjct: 230 PF 231
>ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 [Sorghum bicolor]
gi|241947124|gb|EES20269.1| hypothetical protein
SORBIDRAFT_0139s002040 [Sorghum bicolor]
Length = 1822
Score = 75.5 bits (184), Expect = 1e-11
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRST CVFLGY +H+GY+CYDL+S++++ISRHV+F E+ F
Sbjct: 1046 VFGCACYPNTTATAPHKLAPRSTLCVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDESIF 1105
Query: 472 LFS 464
FS
Sbjct: 1106 PFS 1108
>ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787 [Sorghum bicolor]
gi|241928093|gb|EES01238.1| hypothetical protein
SORBIDRAFT_03g030787 [Sorghum bicolor]
Length = 1567
Score = 75.5 bits (184), Expect = 1e-11
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRST CVFLGY +H+GY+CYDL+S++++ISRHV+F E+ F
Sbjct: 796 VFGCACYPNTTATAPHKLAPRSTLCVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDESIF 855
Query: 472 LFS 464
FS
Sbjct: 856 PFS 858
>ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427 [Sorghum bicolor]
gi|241923573|gb|EER96717.1| hypothetical protein
SORBIDRAFT_02g024427 [Sorghum bicolor]
Length = 1575
Score = 75.5 bits (184), Expect = 1e-11
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRST CVFLGY +H+GY+CYDL+S++++ISRHV+F E+ F
Sbjct: 799 VFGCACYPNTTATAPHKLAPRSTLCVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDESIF 858
Query: 472 LFS 464
FS
Sbjct: 859 PFS 861
>ref|NP_001061315.2| Os08g0236200 [Oryza sativa Japonica Group]
gi|255678262|dbj|BAF23229.2| Os08g0236200 [Oryza sativa
Japonica Group]
Length = 624
Score = 74.7 bits (182), Expect = 2e-11
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRS PCVFLGYP++H+G++C D+S++++ ISRHV+F + F
Sbjct: 285 VFGCLCYPNLSATTPHKLSPRSAPCVFLGYPASHKGFRCLDISTRRLYISRHVVFDDKTF 344
Query: 472 LFSKIHNLGFSTYEFL 425
F+ I S+++FL
Sbjct: 345 PFAAIPQ-DASSFDFL 359
>gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group]
Length = 1302
Score = 74.3 bits (181), Expect = 3e-11
Identities = 61/217 (28%), Positives = 87/217 (40%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRS CVF+GYP++HRGY+CYD+ S+++ SRHV F E F
Sbjct: 625 VFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHVTFVEDVF 684
Query: 472 LFSKIHNLGFSTYEFLNHDPSSYAICHSMTQLDXXXXXXXXXXXXXXXXXXXXXXXXXSL 293
F + S +H + + + Q
Sbjct: 685 PFRDAPSPRPSAPPPPDHGDDTIVLLPAPAQ--------HVVTPVGTAPAHDAASPPSPA 736
Query: 292 SHSPVAGSPLGHGXXXXXXXXXXXXXSIPFPNSSVTAHSLPDSSSFPMSRPVTRSQHVIF 113
S +P + +P H P P +S P S+S P TR++ I
Sbjct: 737 SSTPSSAAP-AHDVAPP-----------PSPETS-----SPASASPPRHAMTTRARAGIS 779
Query: 112 KPNKKYGLHTQLSKSSLSRNHVSALHDPN*KLAMDDE 2
KPN +Y + + S + +AL DPN + AM E
Sbjct: 780 KPNPRYAMTATSTLSPTPSSVRAALRDPNWRAAMQAE 816
>ref|XP_002440449.1| hypothetical protein SORBIDRAFT_09g001135 [Sorghum bicolor]
gi|241945734|gb|EES18879.1| hypothetical protein
SORBIDRAFT_09g001135 [Sorghum bicolor]
Length = 488
Score = 74.3 bits (181), Expect = 3e-11
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRST CVFLGY +H+GY+CYDL+S++++ISRHV+F E F
Sbjct: 111 VFGCACYPNTTATAPHKLAPRSTLCVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDEFVF 170
Query: 472 LFS 464
FS
Sbjct: 171 PFS 173
>ref|XP_002444329.1| hypothetical protein SORBIDRAFT_07g020255 [Sorghum bicolor]
gi|241940679|gb|EES13824.1| hypothetical protein
SORBIDRAFT_07g020255 [Sorghum bicolor]
Length = 987
Score = 74.3 bits (181), Expect = 3e-11
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRST CVFLGY +H+GY+CYDL+S++++ISRHV+F E F
Sbjct: 225 VFGCACYPNTTATAPHKLAPRSTLCVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDEFVF 284
Query: 472 LFS 464
FS
Sbjct: 285 PFS 287
>ref|XP_002453623.1| hypothetical protein SORBIDRAFT_04g009135 [Sorghum bicolor]
gi|241933454|gb|EES06599.1| hypothetical protein
SORBIDRAFT_04g009135 [Sorghum bicolor]
Length = 801
Score = 74.3 bits (181), Expect = 3e-11
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRST CVFLGY +H+GY+CYDL+S++++ISRHV+F E F
Sbjct: 111 VFGCACYPNTTATAPHKLAPRSTLCVFLGYSPDHKGYRCYDLTSRRVLISRHVVFDEFVF 170
Query: 472 LFS 464
FS
Sbjct: 171 PFS 173
>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1414
Score = 74.3 bits (181), Expect = 3e-11
Identities = 61/217 (28%), Positives = 87/217 (40%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRS CVF+GYP++HRGY+CYD+ S+++ SRHV F E F
Sbjct: 723 VFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHVTFVEDVF 782
Query: 472 LFSKIHNLGFSTYEFLNHDPSSYAICHSMTQLDXXXXXXXXXXXXXXXXXXXXXXXXXSL 293
F + S +H + + + Q
Sbjct: 783 PFRDAPSPRPSAPPPPDHGDDTIVLLPAPAQ--------HVVTPVGTAPAHDAASPPSPA 834
Query: 292 SHSPVAGSPLGHGXXXXXXXXXXXXXSIPFPNSSVTAHSLPDSSSFPMSRPVTRSQHVIF 113
S +P + +P H P P +S P S+S P TR++ I
Sbjct: 835 SSTPSSAAP-AHDVAPP-----------PSPETS-----SPASASPPRHAMTTRARAGIS 877
Query: 112 KPNKKYGLHTQLSKSSLSRNHVSALHDPN*KLAMDDE 2
KPN +Y + + S + +AL DPN + AM E
Sbjct: 878 KPNPRYAMTATSTLSPTPSSVRAALRDPNWRAAMQAE 914
>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 1417
Score = 74.3 bits (181), Expect = 3e-11
Identities = 61/217 (28%), Positives = 87/217 (40%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRS CVF+GYP++HRGY+CYD+ S+++ SRHV F E F
Sbjct: 723 VFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHVTFVEDVF 782
Query: 472 LFSKIHNLGFSTYEFLNHDPSSYAICHSMTQLDXXXXXXXXXXXXXXXXXXXXXXXXXSL 293
F + S +H + + + Q
Sbjct: 783 PFRDAPSPRPSAPPPPDHGDDTIVLLPAPAQ--------HVVTPVGTAPAHDAASPPSPA 834
Query: 292 SHSPVAGSPLGHGXXXXXXXXXXXXXSIPFPNSSVTAHSLPDSSSFPMSRPVTRSQHVIF 113
S +P + +P H P P +S P S+S P TR++ I
Sbjct: 835 SSTPSSAAP-AHDVAPP-----------PSPETS-----SPASASPPRHAMTTRARAGIS 877
Query: 112 KPNKKYGLHTQLSKSSLSRNHVSALHDPN*KLAMDDE 2
KPN +Y + + S + +AL DPN + AM E
Sbjct: 878 KPNPRYAMTATSTLSPTPSSVRAALRDPNWRAAMQAE 914
>ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777861 [Setaria italica]
Length = 2179
Score = 73.9 bits (180), Expect = 4e-11
Identities = 35/65 (53%), Positives = 43/65 (66%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRST CVFLGY S+H+GY+C DL S +II+SRHV+F E F
Sbjct: 796 VFGCACYPNLTSTAPHKLSPRSTLCVFLGYSSDHKGYRCLDLHSNRIIVSRHVVFDETLF 855
Query: 472 LFSKI 458
FS++
Sbjct: 856 PFSEM 860
>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1679
Score = 73.9 bits (180), Expect = 4e-11
Identities = 34/67 (50%), Positives = 44/67 (65%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRST CVFLGYP H+GY+C+D S ++IISRHV+F E +F
Sbjct: 920 VFGCKCYPNLSATTPHKLAPRSTMCVFLGYPLYHKGYRCFDPLSNRVIISRHVVFDEHSF 979
Query: 472 LFSKIHN 452
F+++ N
Sbjct: 980 PFTELTN 986
>ref|XP_004954684.1| PREDICTED: ent-cassadiene C2-hydroxylase-like [Setaria italica]
Length = 1009
Score = 73.6 bits (179), Expect = 5e-11
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG +HKL PRST CVFL Y ++H+GY+C DLSS ++IISRHV+F E+ F
Sbjct: 389 VFGSACYPNLSATAMHKLAPRSTLCVFLSYSAHHKGYRCLDLSSNRLIISRHVVFDESIF 448
Query: 472 LF-SKIHNLGFSTYEFLNHDPSSYAICHSMTQL 377
F S L + ++FL+ + SM+ L
Sbjct: 449 PFTSATSPLSPAAFDFLDDSTNPVPTSASMSPL 481
>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
Length = 1803
Score = 73.2 bits (178), Expect = 6e-11
Identities = 61/217 (28%), Positives = 86/217 (39%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRS CVF+GYP++HRGY+CYD+ S+++ SRHV F E F
Sbjct: 723 VFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHVTFVEDVF 782
Query: 472 LFSKIHNLGFSTYEFLNHDPSSYAICHSMTQLDXXXXXXXXXXXXXXXXXXXXXXXXXSL 293
F + S +H + + + Q
Sbjct: 783 PFRDAPSPRPSAPPPPDHGDDTIVLLPAPAQ--------HVVTPVGTAPAHDAASPPSPA 834
Query: 292 SHSPVAGSPLGHGXXXXXXXXXXXXXSIPFPNSSVTAHSLPDSSSFPMSRPVTRSQHVIF 113
S +P + +P H P P +S P S+S P TR++ I
Sbjct: 835 SSTPSSAAP-AHDVAPP-----------PSPETS-----SPASASPPRHAMTTRARAGIS 877
Query: 112 KPNKKYGLHTQLSKSSLSRNHVSALHDPN*KLAMDDE 2
KPN +Y + + S + AL DPN + AM E
Sbjct: 878 KPNPRYAMTATSTLSPTPSSVRVALRDPNWRAAMQAE 914
>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1597
Score = 72.0 bits (175), Expect = 1e-10
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRST C+FLGYP +H+GY+C D S+ ++IISRHV+F E +F
Sbjct: 838 VFGCKCYPNLSATAPHKLSPRSTMCIFLGYPLHHKGYRCLDPSTNRVIISRHVVFDEHSF 897
Query: 472 LFSKI 458
++ I
Sbjct: 898 PYANI 902
>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 978
Score = 71.2 bits (173), Expect = 2e-10
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRS CVFLGYP++H+G++C D+S++ + ISRHV+F E F
Sbjct: 257 VFGCLCYPNLSATTPHKLSPRSAACVFLGYPASHKGFRCLDISTRHLYISRHVVFDEQTF 316
Query: 472 LFSKIHNLGFSTYEFL 425
F+ + S+++FL
Sbjct: 317 PFAAVPQ-DASSFDFL 331
>emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]
Length = 811
Score = 71.2 bits (173), Expect = 2e-10
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRST CVFLGYP H+GY+C+D S ++IIS HV+F E +F
Sbjct: 52 VFGCKCYPNLSATTPHKLAPRSTMCVFLGYPLYHKGYRCFDPLSNRVIISWHVVFDEHSF 111
Query: 472 LFSKIHN 452
F+++ N
Sbjct: 112 SFTELTN 118
>ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [Sorghum bicolor]
gi|241937618|gb|EES10763.1| hypothetical protein
SORBIDRAFT_06g016046 [Sorghum bicolor]
Length = 856
Score = 70.5 bits (171), Expect = 4e-10
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Frame = -2
Query: 652 VFGXXXXXXXXXXXLHKLYPRSTPCVFLGYPSNHRGYKCYDLSSKKIIISRHVIFYEANF 473
VFG HKL PRS+ CVF+GY +H+GY+C DL++ ++IISRHV+F E F
Sbjct: 70 VFGSTCYPNLTATTPHKLAPRSSLCVFIGYSPDHKGYRCLDLTTNRVIISRHVVFDETTF 129
Query: 472 LFS------KIHNLGFSTYEFLNHDPSS 407
FS H L F T N D SS
Sbjct: 130 PFSLRRPSPPPHELDFLT----NDDSSS 153