BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00018289
         (1401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245...   127   3e-53
ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243...   124   4e-53
ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259...   118   7e-52
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259...   122   4e-50
ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255...   114   8e-50
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248...   124   2e-49
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...   114   9e-49
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   102   1e-46
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   104   1e-46
ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260...   113   2e-46
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   106   5e-44
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]   103   3e-43
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   102   8e-43
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   104   1e-42
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...   102   3e-42
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]            116   5e-41
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...   102   7e-41
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...    91   8e-41
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   108   2e-40
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   102   2e-40

>ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245809 [Solanum
            lycopersicum]
          Length = 1094

 Score =  127 bits (320), Expect(3) = 3e-53
 Identities = 67/154 (43%), Positives = 94/154 (61%), Gaps = 1/154 (0%)
 Frame = +3

Query: 27   KTIFFCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHT 206
            K  F C +CPMA+Q+R  F      ++  F L+H+D WGPY T TYN+FKYF+T+VD  +
Sbjct: 557  KQPFMCSICPMARQERLPFKPRTTLTSHIFELLHVDLWGPYSTPTYNHFKYFMTIVDDFS 616

Query: 207  RVIWTPHIL*K-QCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENGI 383
            R  WT  +  K    +++++F     N F++     +IR    +   +  ST FF   GI
Sbjct: 617  RATWTQLLSTKSNALQNLKSFITMIENQFEVTVK--KIRTDNGLEFVNTESTNFFKTKGI 674

Query: 384  LHYTTVPHTPQQNRIVKRKHKHLLEVFRSLLFQS 485
            +H  T P+TPQQN +V+RKHKHLLE  R+LLFQS
Sbjct: 675  VHQKTCPYTPQQNGVVERKHKHLLETARALLFQS 708



 Score =  102 bits (254), Expect(3) = 3e-53
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = +2

Query: 497 KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
           KYWGECIL ATY+INR+PS VL  +   E L  + P Y+H+ SFGCLCY T P P R KF
Sbjct: 713 KYWGECILCATYIINRLPSTVLNQKCPYEVLYFRKPLYSHMRSFGCLCYPTVPIPHRAKF 772

Query: 677 *SRSIPVVFLGYPSGKKAYKLLNL 748
             R+ P +F+GYP   K YK+L++
Sbjct: 773 EPRTTPHIFIGYPHETKGYKVLSM 796



 Score = 28.1 bits (61), Expect(3) = 3e-53
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +1

Query: 736 ALKSYSIFFSRDVAFREHIFPYHSSTPIPT-SFFPLIPTP-FVDI 864
           ++ +  I   RDV F E++FP+  S    T S F L+ +P F+DI
Sbjct: 795 SMSTGKIHVCRDVIFHENVFPFSDSFSNTTGSPFSLLQSPHFIDI 839



 Score =  110 bits (275), Expect = 1e-21
 Identities = 57/150 (38%), Positives = 82/150 (54%), Gaps = 26/150 (17%)
 Frame = +3

Query: 1029 RKSSRVPHRPSHLNDFIYNFVFPSPPVSDKSK-------VFTVEIHM------------- 1148
            R+S+R    P H+ND++++     PPVS  +        +F+   H+             
Sbjct: 886  RRSTRCHKLPKHMNDYVHSIPLLKPPVSQTTNTTPSLQVLFSNHHHLAHSALIPTSQDVV 945

Query: 1149 ------HEPQFY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQ 1310
                   EP  Y   VI+  WQ AM +EF  L  N TWD+VP+ F KK+I C+W+YK+K 
Sbjct: 946  RNVCIDREPTSYEEAVIDPAWQAAMTQEFDALHLNHTWDLVPLPFGKKAIGCRWVYKVKH 1005

Query: 1311 TFDSSIEKYKARLVIRGNAKKEGIDYTETF 1400
              D +IE+ KARLV++G  ++ GIDYTETF
Sbjct: 1006 KADGTIERLKARLVVKGYTQQAGIDYTETF 1035


>ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum
            lycopersicum]
          Length = 957

 Score =  124 bits (310), Expect(3) = 4e-53
 Identities = 67/154 (43%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
 Frame = +3

Query: 27   KTIFFCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHT 206
            K  F C +CPMA+Q R  FP S   +T  F L+H+D WGPYH  T++ + YFLT+VD + 
Sbjct: 626  KQPFTCNICPMARQTRMPFPESTSITTKTFELLHVDLWGPYHIPTHDGYHYFLTMVDDYN 685

Query: 207  RVIWTPHIL*K-QCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENGI 383
            R  WT  +  K    ++++ F     N FQ +     IR    +   S  +  FF   GI
Sbjct: 686  RSTWTQLLRCKSNALQTIKAFVSLIENQFQTKLK--AIRSDNGLEFTSSEAVHFFQTKGI 743

Query: 384  LHYTTVPHTPQQNRIVKRKHKHLLEVFRSLLFQS 485
            +H  T P+TPQQN +V+RKHK+LLE  RSLLFQS
Sbjct: 744  IHQKTCPYTPQQNGVVERKHKYLLETARSLLFQS 777



 Score =  109 bits (273), Expect(3) = 4e-53
 Identities = 49/84 (58%), Positives = 64/84 (76%)
 Frame = +2

Query: 497  KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
            +YWGEC+LTATY+INR+P+ +LQN+S  E L  K P+Y+HL SFGCLC+ T  K  +DKF
Sbjct: 782  RYWGECVLTATYIINRLPTKLLQNKSPYEILYLKQPTYSHLKSFGCLCFPTVLKTHKDKF 841

Query: 677  *SRSIPVVFLGYPSGKKAYKLLNL 748
              R+IP +F+GYP   K YK+LNL
Sbjct: 842  EPRTIPHIFVGYPFNTKGYKVLNL 865



 Score = 24.3 bits (51), Expect(3) = 4e-53
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 739 LKSYSIFFSRDVAFREHIFPY 801
           L +  +  SRDV F E +FP+
Sbjct: 865 LATKKVHISRDVVFHERMFPF 885


>ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259633 [Solanum
            lycopersicum]
          Length = 1105

 Score =  118 bits (296), Expect(3) = 7e-52
 Identities = 65/151 (43%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
 Frame = +3

Query: 36   FFCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHTRVI 215
            F C +CPMA+Q R  F  S  HS   F L+H++ WGPYH  TYNN +YF+TLVD ++R  
Sbjct: 625  FTCTICPMARQTRLPFTHSTTHSKSIFDLLHVNLWGPYHVPTYNNCRYFITLVDDYSRAT 684

Query: 216  WTPHIL*K-QCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENGILHY 392
            WT  +  K    + ++ F     N FQ       IR    +   +     FF   GI H 
Sbjct: 685  WTYLLSTKSNAIQVLQTFINMIENQFQTNVK--CIRSDNGLEFNNNEILRFFQAKGITHQ 742

Query: 393  TTVPHTPQQNRIVKRKHKHLLEVFRSLLFQS 485
             + P+TPQQN IV+RKH++LLE  R+LLFQS
Sbjct: 743  KSCPYTPQQNSIVERKHRYLLETARALLFQS 773



 Score =  107 bits (268), Expect(3) = 7e-52
 Identities = 51/87 (58%), Positives = 62/87 (71%)
 Frame = +2

Query: 497  KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
            KYWG+CILT+TYLINRIPS  LQN+   E L  + P Y+ L SFGCLCY T PK  RDK 
Sbjct: 778  KYWGDCILTSTYLINRIPSTFLQNKCPYEMLYKEKPKYSQLRSFGCLCYPTLPKVHRDKL 837

Query: 677  *SRSIPVVFLGYPSGKKAYKLLNLIPS 757
              R+ P +F+GYPSG K YK+++L  S
Sbjct: 838  -PRTTPHIFIGYPSGIKGYKVMSLATS 863



 Score = 27.3 bits (59), Expect(3) = 7e-52
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +1

Query: 730 LQALKSYSIFFSRDVAFREHIFPYHSSTPIPTSFFPLIPTPFVDI 864
           + +L +  I  SRDV F E IFP+  S+   ++FF +  T   D+
Sbjct: 857 VMSLATSKIQISRDVIFHEDIFPFSFSSD-NSNFFSIPKTYSTDL 900



 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 31/157 (19%)
 Frame = +3

Query: 1023 PTRKSSRVPHRPSHLNDFIYNFV------------------------------FPSPPVS 1112
            P RKS+R    P HL D++ +F                                 S  ++
Sbjct: 944  PQRKSNRETKIPCHLKDYVLSFPNLKNNSVSNTIPNTNQNSLISNALLSKYNHINSDAIA 1003

Query: 1113 DKSKVFTVEIHMH-EPQFY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCK 1289
              S+V    I    EP  Y    +   WQ+AM +EF  L AN+TWD+V +   K+ I CK
Sbjct: 1004 STSQVLVENICCDSEPHSYEEAALIPAWQKAMEQEFDALHANRTWDLVILPVDKQDIGCK 1063

Query: 1290 WIYKIKQTFDSSIEKYKARLVIRGNAKKEGIDYTETF 1400
            W+YK+K   D SIE++KARLV++   ++ GIDYTET+
Sbjct: 1064 WVYKVKHKADGSIERFKARLVVKRYTQRVGIDYTETY 1100


>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
            lycopersicum]
          Length = 986

 Score =  122 bits (305), Expect(2) = 4e-50
 Identities = 64/155 (41%), Positives = 92/155 (59%), Gaps = 1/155 (0%)
 Frame = +3

Query: 24   HKTIFFCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGH 203
            +K  F C +CPMA+Q R  FP S   ++  F L+H+D WGPY+  T++ + YFLT+VD +
Sbjct: 626  NKQPFTCTICPMARQTRMPFPESTTRTSSIFELLHVDLWGPYNVPTHDGYHYFLTMVDDY 685

Query: 204  TRVIWTPHIL*K-QCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENG 380
            +R  WT  I  K     +++ F     N F  +     IR    +   +  +T FF E G
Sbjct: 686  SRATWTQLIRCKSNALHTIKAFVSLIENQFHTRLKT--IRSDNGLEFSNNEATSFFQEKG 743

Query: 381  ILHYTTVPHTPQQNRIVKRKHKHLLEVFRSLLFQS 485
            I+H  + P+TPQQN +V+RKHK+LLE  R+LLFQS
Sbjct: 744  IIHQKSCPYTPQQNGVVERKHKYLLETARALLFQS 778



 Score =  105 bits (261), Expect(2) = 4e-50
 Identities = 46/84 (54%), Positives = 62/84 (73%)
 Frame = +2

Query: 497  KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
            +YWGEC+LTATYLINR+P+ +LQ +S  E L  K P Y+HL +FGCLC+ T  K  ++KF
Sbjct: 783  RYWGECVLTATYLINRLPTKLLQGKSPYELLYQKKPFYSHLKNFGCLCFPTTLKTHKEKF 842

Query: 677  *SRSIPVVFLGYPSGKKAYKLLNL 748
              R++P +F+GYP   K YK+LNL
Sbjct: 843  EPRTVPHIFIGYPFNTKGYKVLNL 866


>ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum
            lycopersicum]
          Length = 1125

 Score =  114 bits (285), Expect(3) = 8e-50
 Identities = 64/154 (41%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
 Frame = +3

Query: 27   KTIFFCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHT 206
            K  F C +CPMA+Q R  F  S   +T  F L+H+D WGPYH  T++ + YFLT+VD ++
Sbjct: 633  KQPFTCNICPMARQTRMPFQESTSITTKIFELLHVDLWGPYHIPTHDGYHYFLTMVDDYS 692

Query: 207  RVIWTPHIL*K-QCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENGI 383
            R   T  +  K    ++++ F     N FQ +     IR    +   S  +  FF   GI
Sbjct: 693  RSTCTQLLRCKSNALQTIKAFVSLIENEFQTKLK--AIRSDNGLEFTSSEAVHFFQTKGI 750

Query: 384  LHYTTVPHTPQQNRIVKRKHKHLLEVFRSLLFQS 485
            +H  T P+TPQQN +V+RKHK+LLE  R+LLFQS
Sbjct: 751  IHQKTCPYTPQQNGVVERKHKYLLETARALLFQS 784



 Score =  108 bits (269), Expect(3) = 8e-50
 Identities = 49/84 (58%), Positives = 62/84 (73%)
 Frame = +2

Query: 497  KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
            +YWGEC+LTA Y+INR+P+ +LQN+S  E L  K P+Y+HL SFGCLC+ T  K  +DKF
Sbjct: 789  RYWGECVLTAIYIINRLPTKLLQNKSPYETLYLKQPTYSHLKSFGCLCFPTVLKTHKDKF 848

Query: 677  *SRSIPVVFLGYPSGKKAYKLLNL 748
              R IP VF+GYP   K YK+LNL
Sbjct: 849  EPRGIPHVFVGYPFNTKGYKVLNL 872



 Score = 24.3 bits (51), Expect(3) = 8e-50
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 739 LKSYSIFFSRDVAFREHIFPY 801
           L +  +  SRDV F E +FP+
Sbjct: 872 LATKKVHISRDVVFHERMFPF 892



 Score =  107 bits (268), Expect = 9e-21
 Identities = 58/143 (40%), Positives = 85/143 (59%), Gaps = 15/143 (10%)
 Frame = +3

Query: 1017 KEPTRKSSRVPHRPSHLNDFIYN---------FVFPSPPV------SDKSKVFTVEIHMH 1151
            +EP R++SR  + PS+L D+ YN         FV  +  V      SD  ++ T   H  
Sbjct: 964  QEP-RRTSRTINTPSYLKDYTYNLPKLHSLNTFVSHNNHVCFNSLCSDSQQLVTTISHEC 1022

Query: 1152 EPQFY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSSIE 1331
            EP  +   +++  WQ+AM  EF+ L AN TW++V +   KK+I CKW+YKIK   D SIE
Sbjct: 1023 EPNTFEEAILHPAWQQAMTHEFEALHANDTWEMVMLPDEKKAIGCKWVYKIKHKADGSIE 1082

Query: 1332 KYKARLVIRGNAKKEGIDYTETF 1400
            ++KARLV++G  ++ G+DY ETF
Sbjct: 1083 RFKARLVVKGYTQQAGVDYNETF 1105


>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
           lycopersicum]
          Length = 729

 Score =  124 bits (311), Expect(2) = 2e-49
 Identities = 65/155 (41%), Positives = 92/155 (59%), Gaps = 1/155 (0%)
 Frame = +3

Query: 24  HKTIFFCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGH 203
           +K  F C +CPMA+Q R  FP S   ++  F L+H+D WGPY+  T++ + YFLT+VD +
Sbjct: 283 NKQPFTCTICPMARQTRMPFPESVTRTSSIFELLHVDLWGPYNVPTHDGYHYFLTMVDDY 342

Query: 204 TRVIWTPHIL*K-QCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENG 380
           +R  WT  I  K     +++ F     N FQ +     IR    +   S  +T FF E G
Sbjct: 343 SRATWTQLIRCKSNALHTIKAFISLIENQFQTRLKT--IRSDNGLEFTSTEATCFFQEKG 400

Query: 381 ILHYTTVPHTPQQNRIVKRKHKHLLEVFRSLLFQS 485
           I+H  + P+TPQQN +V+ KHK+LLE  R+LLFQS
Sbjct: 401 IIHQKSCPYTPQQNGVVEMKHKYLLETARALLFQS 435



 Score =  100 bits (248), Expect(2) = 2e-49
 Identities = 45/84 (53%), Positives = 60/84 (71%)
 Frame = +2

Query: 497 KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
           +YWGE +LTATYLINR+P+ +L  +S  E L  K P Y+HL +FGCLC+ T  K  +DKF
Sbjct: 440 RYWGEYVLTATYLINRLPTKLLPGKSPYELLYQKKPFYSHLKNFGCLCFPTTLKTHKDKF 499

Query: 677 *SRSIPVVFLGYPSGKKAYKLLNL 748
             R++P +F+GYP   K YK+LNL
Sbjct: 500 EPRTVPHIFIGYPFNTKGYKVLNL 523


>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score =  114 bits (284), Expect(3) = 9e-49
 Identities = 68/157 (43%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
 Frame = +3

Query: 24  HKTIFFCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGH 203
           +K  F C +CPMA+Q +  FP S I S   F L+HIDTWGPY+  TY   +YFLT+VD  
Sbjct: 40  NKQTFPCDICPMARQSKPPFPSSTIKSKQCFELIHIDTWGPYNVPTYKGERYFLTIVDDF 99

Query: 204 TRVIWTPHIL*K-QCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQS-VLSTVFFNEN 377
           +R  WT  +  K   F ++++  L      Q  S    IR      L S V+ + F    
Sbjct: 100 SRATWTYLLTTKSNAFATLKS--LLSLIERQFSSKVKIIRSDNAYELGSGVIPSEFLASL 157

Query: 378 GILHYTTVPHTPQQNRIVKRKHKHLLEVFRSLLFQSN 488
           GI+H TT   TPQQN +V+RKH+HLLE  R+LL+QS+
Sbjct: 158 GIIHQTTCVGTPQQNGVVERKHRHLLETCRALLYQSH 194



 Score = 99.4 bits (246), Expect(3) = 9e-49
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = +2

Query: 497 KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
           K+WG+C+LTATYLINR PS VL  +   + L G +P Y+HL SFG LC+ +     RDK 
Sbjct: 198 KFWGDCLLTATYLINRFPSKVLNGKCPYQVLFGSLPDYSHLKSFGSLCFVSTLTRHRDKL 257

Query: 677 *SRSIPVVFLGYPSGKKAYKLLNL 748
             R+IP VFLGYP  +K YK+LNL
Sbjct: 258 MPRAIPGVFLGYPFAQKGYKVLNL 281



 Score = 30.0 bits (66), Expect(3) = 9e-49
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 739 LKSYSIFFSRDVAFREHIFPYHSSTPIPTSFFPLIPT 849
           L++  +  SRDV F E IFP+  S P+   F    PT
Sbjct: 281 LQTSQVIVSRDVKFFESIFPFSYSLPMSKLFPASFPT 317



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
 Frame = +3

Query: 1029 RKSSRVPHRPSHLNDFI----YNFVFPSPPVSD-KSKVFTV-EIH----------MHEPQ 1160
            R+ +R    P++L+DF+    Y  + P+PPV    S  FT    H          + EP 
Sbjct: 378  RRGARTKAPPAYLSDFVCDTTYTVISPNPPVIPFHSYAFTTFSTHNQHFLNSLSIVKEPV 437

Query: 1161 FY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSS 1325
             Y     +  WQ AM  E   L +N+TWD+V +   KK +PCKW+YK+K   D +
Sbjct: 438  SYLQAASHPGWQAAMDTELAALNSNKTWDVVVLPPGKKPLPCKWVYKVKLKSDEA 492


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  102 bits (254), Expect(3) = 1e-46
 Identities = 60/158 (37%), Positives = 84/158 (53%), Gaps = 2/158 (1%)
 Frame = +3

Query: 21   VHKTIF-FCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVD 197
            +HK I   CP+CP AKQ R  FP S I +  PF L+H D WGP+    +   +YFLT+VD
Sbjct: 792  IHKEIGNHCPICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGPHKIPAHTGSRYFLTIVD 851

Query: 198  GHTRVIWTPHIL*KQCFES-VENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNE 374
              +R  W   +  K   +S + NF       F       ++   T    + +   +F   
Sbjct: 852  DFSRCTWIFLMHHKSETQSLLTNFVQFVKTQFHTDVQTVRMDNGT----EFIPLRIFLQN 907

Query: 375  NGILHYTTVPHTPQQNRIVKRKHKHLLEVFRSLLFQSN 488
             GI   T+  +TPQQN +V+RKH+H+L V RSL+FQSN
Sbjct: 908  KGIELQTSCIYTPQQNGVVERKHRHILNVARSLMFQSN 945



 Score = 94.7 bits (234), Expect(3) = 1e-46
 Identities = 46/84 (54%), Positives = 57/84 (67%)
 Frame = +2

Query: 497  KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
            ++WGEC+LTA YLINRIP+ +L N+S  E L  + PS  HL  FGC CY T   P + KF
Sbjct: 949  EFWGECVLTAVYLINRIPTPLLSNKSPFEVLYNRPPSLTHLRVFGCECYVTNVHP-KQKF 1007

Query: 677  *SRSIPVVFLGYPSGKKAYKLLNL 748
              R+   VFLGYP GKK YK+L+L
Sbjct: 1008 DPRASICVFLGYPHGKKGYKVLDL 1031



 Score = 39.3 bits (90), Expect(3) = 1e-46
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = +1

Query: 739  LKSYSIFFSRDVAFREHIFPYHSSTPIPTSFFPLIPTPFVDIPVFF 876
            L++  I  SRDV FRE+IFP+HSS+       P +P P   +P+ F
Sbjct: 1031 LQTQKISVSRDVFFRENIFPFHSSSSQSQQHSPSLPLP---LPISF 1073



 Score = 80.5 bits (197), Expect = 2e-12
 Identities = 38/83 (45%), Positives = 52/83 (62%)
 Frame = +3

Query: 1152 EPQFY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSSIE 1331
            EP  +     +  W++AM  E Q L+ N TW++VP+    K I C+W+YKIK   D +IE
Sbjct: 1219 EPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPLPPGHKPIGCRWVYKIKYHSDGTIE 1278

Query: 1332 KYKARLVIRGNAKKEGIDYTETF 1400
            +YKARLV +G  +  GIDY ETF
Sbjct: 1279 RYKARLVAKGYTQVAGIDYQETF 1301


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  104 bits (260), Expect(3) = 1e-46
 Identities = 60/150 (40%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
 Frame = +3

Query: 42  CPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHTRVIWT 221
           C  C  +KQ R  FPIS   +   F L+H D WGPY T +     YFLTLVD ++R +WT
Sbjct: 533 CDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGPYRTPSTTGAVYFLTLVDDYSRSVWT 592

Query: 222 PHIL*K-QCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENGILHYTT 398
             +  K +  + ++NFC      F  Q   F+    T    + +  T +F  +GILH T+
Sbjct: 593 YLMSSKTEVSQLIKNFCAMSERQFGKQVKAFRTDNGT----EFMCLTPYFQTHGILHQTS 648

Query: 399 VPHTPQQNRIVKRKHKHLLEVFRSLLFQSN 488
              TPQQN  V+RKH+H+L V R+ LFQ N
Sbjct: 649 CVDTPQQNGRVERKHRHILNVARACLFQGN 678



 Score = 99.8 bits (247), Expect(3) = 1e-46
 Identities = 48/84 (57%), Positives = 61/84 (72%)
 Frame = +2

Query: 497 KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
           K+WGE ILTAT+LINR PS VL+ ++  E L G+ PSY+ L SFGCLCYA      +DKF
Sbjct: 682 KFWGESILTATHLINRTPSAVLKGKTPYELLFGERPSYDMLRSFGCLCYAHIRPRNKDKF 741

Query: 677 *SRSIPVVFLGYPSGKKAYKLLNL 748
            SRS   VF+GYP GKKA+++ +L
Sbjct: 742 TSRSRKCVFIGYPHGKKAWRVYDL 765



 Score = 31.6 bits (70), Expect(3) = 1e-46
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = +1

Query: 739 LKSYSIFFSRDVAFREHIFPY----HSSTPIPTSFFPLI 843
           L++  IF SRDV F E I+PY     S+ P+P    P++
Sbjct: 765 LETGKIFASRDVRFHEDIYPYATATQSNVPLPPPTPPMV 803



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 43/112 (38%), Positives = 70/112 (62%)
 Frame = +3

Query: 1065 LNDFIYNFVFPSPPVSDKSKVFTVEIHMHEPQFY*HVVINLTWQEAMLKEFQDLKANQTW 1244
            L+DF+ N  + +  ++  + +    +  +EP+ +   ++   W EAM KE   L+AN TW
Sbjct: 961  LSDFLTNSGYSANHIAFMAAI----LDSNEPKHFKDAILIKEWCEAMSKEIDALEANHTW 1016

Query: 1245 DIVPILFHKKSIPCKWIYKIKQTFDSSIEKYKARLVIRGNAKKEGIDYTETF 1400
            DI  +   KK+I  KW+YK+K   D ++E++KARLV+ GN +KEG+D+ ETF
Sbjct: 1017 DITDLPHGKKAISSKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETF 1068


>ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260907 [Solanum
           lycopersicum]
          Length = 924

 Score =  113 bits (283), Expect(2) = 2e-46
 Identities = 61/155 (39%), Positives = 88/155 (56%), Gaps = 1/155 (0%)
 Frame = +3

Query: 24  HKTIFFCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGH 203
           +K  F C +CPMA+Q R  FP S   ++  F L+ +D WGPY+  T++ + YFLT+VD +
Sbjct: 461 NKQPFTCTICPMARQTRMPFPESVTATSSIFELLRVDLWGPYNVPTHDGYHYFLTMVDDY 520

Query: 204 TRVIWTPHIL*K-QCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENG 380
           +R  WT  +  K     +++ F     N F  +     IR    +   S  +T FF E  
Sbjct: 521 SRATWTQFLRCKSNALHTIKAFISLIENQFHTRLKT--IRSDNGLEFSSTEATCFFQEKS 578

Query: 381 ILHYTTVPHTPQQNRIVKRKHKHLLEVFRSLLFQS 485
           I+H  + P T QQN +V+RKHK+LLE  R+LLFQS
Sbjct: 579 IIHQQSCPCTQQQNGLVERKHKYLLETARALLFQS 613



 Score =  100 bits (250), Expect(2) = 2e-46
 Identities = 45/83 (54%), Positives = 60/83 (72%)
 Frame = +2

Query: 497 KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
           +YW EC+LTATYLINR+P+ +LQ +S  E L  K P Y+HL +FGCLC+ T  K  +DKF
Sbjct: 618 RYWVECVLTATYLINRLPTKLLQGKSPYELLYQKKPFYSHLRNFGCLCFPTTLKTHKDKF 677

Query: 677 *SRSIPVVFLGYPSGKKAYKLLN 745
             R++P +F+GYP   K YK+LN
Sbjct: 678 EPRTMPHIFIGYPFNTKGYKVLN 700


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  106 bits (264), Expect(3) = 5e-44
 Identities = 60/150 (40%), Positives = 85/150 (56%), Gaps = 1/150 (0%)
 Frame = +3

Query: 42   CPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHTRVIWT 221
            C +CP+AKQ R SFP SFI S  PF L+H D WGP+   +++   YFLT+VD HTR  W 
Sbjct: 569  CDICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGAXYFLTIVDDHTRYTWI 628

Query: 222  PHIL*KQCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLS-TVFFNENGILHYTT 398
             H++    F+S     L    S+     N  I+         + S   + +  GI ++ +
Sbjct: 629  -HLM---SFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEISSMKQYLDTKGINYHHS 684

Query: 399  VPHTPQQNRIVKRKHKHLLEVFRSLLFQSN 488
              +TPQQN +V+RKH+HLL V R+L FQ+N
Sbjct: 685  CAYTPQQNGVVERKHRHLLNVGRALRFQAN 714



 Score = 89.4 bits (220), Expect(3) = 5e-44
 Identities = 43/89 (48%), Positives = 61/89 (68%)
 Frame = +2

Query: 497 KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
           K+WGE I TA YLINR+P+ +L ++S  + L  K+PSY+HL +FGCLCYAT   P   KF
Sbjct: 718 KFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCYATNLLP-THKF 776

Query: 677 *SRSIPVVFLGYPSGKKAYKLLNLIPSFF 763
             R+   +F+GYP G+K Y++ +L  + F
Sbjct: 777 DQRARRCIFVGYPLGQKGYRVYDLXTNKF 805



 Score = 31.6 bits (70), Expect(3) = 5e-44
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 739 LKSYSIFFSRDVAFREHIFPYHSSTPIPTSFFPLIPTP 852
           L +   F S DV F EHIFP+H++         ++P P
Sbjct: 800 LXTNKFFSSXDVVFHEHIFPFHTNPQEEQHDVVVLPLP 837



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 40/83 (48%), Positives = 54/83 (65%)
 Frame = +3

Query: 1152 EPQFY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSSIE 1331
            EP  Y   V++  WQEAM  E   L+ N TW + P+ +  + I CKW+YKIK   D ++E
Sbjct: 950  EPTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPYGHRPIGCKWVYKIKYNSDGTVE 1009

Query: 1332 KYKARLVIRGNAKKEGIDYTETF 1400
            +YKARLV +G  ++EGIDY ETF
Sbjct: 1010 RYKARLVAKGFTQREGIDYKETF 1032


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score =  103 bits (257), Expect(3) = 3e-43
 Identities = 59/150 (39%), Positives = 85/150 (56%), Gaps = 1/150 (0%)
 Frame = +3

Query: 42  CPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHTRVIWT 221
           C + P+AKQ R SFP SFI S  PF L+H D WGP+   +++  +YFLT+VD HTR  W 
Sbjct: 161 CDIXPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGARYFLTIVDDHTRYTWI 220

Query: 222 PHIL*KQCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLS-TVFFNENGILHYTT 398
            H++    F+S     L    S+     N  I+         + S   + +  GI ++ +
Sbjct: 221 -HLM---SFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEISSMKQYLDTKGINYHHS 276

Query: 399 VPHTPQQNRIVKRKHKHLLEVFRSLLFQSN 488
             +TPQQN +V+RKH+HLL V R+L FQ+N
Sbjct: 277 CAYTPQQNGVVERKHRHLLNVGRALRFQAN 306



 Score = 88.6 bits (218), Expect(3) = 3e-43
 Identities = 42/84 (50%), Positives = 59/84 (70%)
 Frame = +2

Query: 497 KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
           K+WGE I TA YLINR+P+ +L ++S  + L  K+PSY+HL +FGCLCYAT   P   KF
Sbjct: 310 KFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCYATNLLP-THKF 368

Query: 677 *SRSIPVVFLGYPSGKKAYKLLNL 748
             R+   +F+GYP G+K Y++ +L
Sbjct: 369 DQRARRCIFVGYPLGQKGYRVYDL 392



 Score = 32.3 bits (72), Expect(3) = 3e-43
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 739 LKSYSIFFSRDVAFREHIFPYHSSTPIPTSFFPLIPTP 852
           L++   F S DV F EHIFP+H++         ++P P
Sbjct: 392 LETNKFFSSXDVVFHEHIFPFHTNPQEEQHDVVVLPLP 429



 Score = 89.0 bits (219), Expect = 4e-15
 Identities = 40/83 (48%), Positives = 53/83 (63%)
 Frame = +3

Query: 1152 EPQFY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSSIE 1331
            EP  Y   V++  WQEAM  E   L+ N TW + P+    + I CKW+YKIK   D ++E
Sbjct: 542  EPTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPSGHRPIGCKWVYKIKYNSDGTVE 601

Query: 1332 KYKARLVIRGNAKKEGIDYTETF 1400
            +YKARLV +G  ++EGIDY ETF
Sbjct: 602  RYKARLVAKGFTQREGIDYKETF 624


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  102 bits (254), Expect(2) = 8e-43
 Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
 Frame = +3

Query: 24   HKTIFFCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGH 203
            +K   +C VC +AKQ++ SFP +       F L+HID WGP+  +T   +KYFLT+VD H
Sbjct: 595  NKKSAYCHVCHLAKQKKLSFPSANNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDH 654

Query: 204  TRVIWTPHIL*KQCFESVENFCLHGPNSFQL--QSLNFQIRQCT*IRLQSVLSTVFFNEN 377
            +R  W          +S  +     P    L     + +++       + +  T F+   
Sbjct: 655  SRATWI------YLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELAFTEFYKAK 708

Query: 378  GILHYTTVPHTPQQNRIVKRKHKHLLEVFRSLLFQSN 488
            GI+ + + P TP+QN +V+RKH+H+L V R+L+FQSN
Sbjct: 709  GIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSN 745



 Score =  100 bits (248), Expect(2) = 8e-43
 Identities = 46/83 (55%), Positives = 58/83 (69%)
 Frame = +2

Query: 500 YWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF* 679
           YWG+C+LTA +LINR PS +L N++  E L GK+P Y+ L +FGCLCY++     R KF 
Sbjct: 750 YWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFL 809

Query: 680 SRSIPVVFLGYPSGKKAYKLLNL 748
            RS   VFLGYP G K YKLL+L
Sbjct: 810 PRSRACVFLGYPFGFKGYKLLDL 832



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
 Frame = +3

Query: 1041 RVPHRPSHLNDFIYNFVFP--SPPVSDKSKVFTVE----IHMHE------PQFY*HVVIN 1184
            R+   P+HL D+   FV    S P+S       +     ++++       PQ Y     +
Sbjct: 897  RITKFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYINNISKIPIPQSYHEAKDS 956

Query: 1185 LTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSSIEKYKARLVIRGN 1364
              W  A+ +E   ++   TW+I  +   KK++ CKW++ +K   D S+E++KAR+V +G 
Sbjct: 957  KEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGY 1016

Query: 1365 AKKEGIDYTETF 1400
             +KEG+DYTETF
Sbjct: 1017 TQKEGLDYTETF 1028


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  104 bits (259), Expect(2) = 1e-42
 Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
 Frame = +3

Query: 24  HKTIFFCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGH 203
           + T F C VC ++KQ+   F      S+ PF L+HIDTWGP+  +T++ ++YFLT+VD +
Sbjct: 433 NNTDFHCRVCHISKQKHLPFVSHNNKSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDY 492

Query: 204 TRVIWTPHIL*K-QCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENG 380
           +R  W   +  K      +  F     N F+       I+         +  T F++  G
Sbjct: 493 SRATWVYLLRNKSDVLTVIPTFVTMVENQFET-----TIKGVRSDNAPELNFTQFYHSKG 547

Query: 381 ILHYTTVPHTPQQNRIVKRKHKHLLEVFRSLLFQSN 488
           I+ Y + P TPQQN +V+RKH+H+L V RSL FQS+
Sbjct: 548 IVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSH 583



 Score = 97.4 bits (241), Expect(2) = 1e-42
 Identities = 44/83 (53%), Positives = 58/83 (69%)
 Frame = +2

Query: 500 YWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF* 679
           YWG+CILTA YLINR+P+ +L+++   E L   VP+Y+H+  FGCLCYA+     R KF 
Sbjct: 588 YWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFS 647

Query: 680 SRSIPVVFLGYPSGKKAYKLLNL 748
            R+    F+GYPSG K YKLL+L
Sbjct: 648 PRAKACAFIGYPSGFKGYKLLDL 670



 Score = 84.7 bits (208), Expect = 8e-14
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
 Frame = +3

Query: 1020 EPTRKSS-RVPHRPSHLNDFIYNFVFPSPP-----------VSDKSKVFTVEIHM-HEPQ 1160
            EP+ ++S R   +P++L D+  + V  S P           ++D    F   +    EP 
Sbjct: 743  EPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRINDPYLTFLACLDKTKEPS 802

Query: 1161 FY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSSIEKYK 1340
             Y        W++AM  EF  L+   TW++  +   K+ I C+WI+KIK   D S+E+YK
Sbjct: 803  NYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIFKIKYNSDGSVERYK 862

Query: 1341 ARLVIRGNAKKEGIDYTETF 1400
            ARLV +G  +KEGIDY ETF
Sbjct: 863  ARLVAQGYTQKEGIDYNETF 882


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
          Length = 1131

 Score =  102 bits (255), Expect(2) = 3e-42
 Identities = 48/84 (57%), Positives = 59/84 (70%)
 Frame = +2

Query: 497 KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
           +YWG+C+LTA +LINR PS +L N+S  E L+GK P Y+ L +FGCLCY +     R KF
Sbjct: 698 QYWGDCVLTAAFLINRTPSPLLANKSPYEVLMGKAPQYDQLRTFGCLCYGSTSPKQRHKF 757

Query: 677 *SRSIPVVFLGYPSGKKAYKLLNL 748
             RS   VFLGYPSG K YKLL+L
Sbjct: 758 MPRSRACVFLGYPSGYKGYKLLDL 781



 Score = 97.8 bits (242), Expect(2) = 3e-42
 Identities = 55/148 (37%), Positives = 80/148 (54%)
 Frame = +3

Query: 42  CPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHTRVIWT 221
           C VC +AKQ++ S+       T  F L+H+D WGP+  +T   +KYFLT+VD H+R  W 
Sbjct: 550 CHVCHLAKQKKLSYSSQNHICTASFQLLHVDVWGPFSVETLEGYKYFLTIVDDHSRATW- 608

Query: 222 PHIL*KQCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENGILHYTTV 401
             I   Q    V +      N  + Q  N +I+         +  T  F E GI+ Y + 
Sbjct: 609 --IYLLQSKSDVLHIFPTFVNQIETQ-YNTKIKSVRRDNAPELSFTELFKEKGIVSYHSC 665

Query: 402 PHTPQQNRIVKRKHKHLLEVFRSLLFQS 485
           P T +QN +++RKH+HLL V R+L+FQS
Sbjct: 666 PETLEQNSVLERKHQHLLNVARALMFQS 693



 Score = 80.5 bits (197), Expect = 2e-12
 Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 11/126 (8%)
 Frame = +3

Query: 1056 PSHLNDF----IYNFVFPSPPVSDKSKVFTVEI-------HMHEPQFY*HVVINLTWQEA 1202
            P+HL DF    +++  +P       S++ +  +       ++  PQ Y  V  +  W E+
Sbjct: 849  PAHLKDFHCYSVHDSAYPISSTLSYSQISSHHLAYINSITNIPIPQSYAEVRQSKEWTES 908

Query: 1203 MLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSSIEKYKARLVIRGNAKKEGI 1382
              KE   ++ N TWD+VP+   KK+I C+W++ +K   D ++E+ K+RLV +G  +KEG+
Sbjct: 909  ADKELDAMEENDTWDVVPLPKGKKAIGCRWVHTLKFNADGTLERRKSRLVGKGYTQKEGL 968

Query: 1383 DYTETF 1400
            DY ETF
Sbjct: 969  DYIETF 974


>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score =  116 bits (291), Expect(3) = 5e-41
 Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
 Frame = +3

Query: 42  CPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHTRVIWT 221
           CPVCP+AKQ R +FP+S   +++ F +VH+D WGPY T T N   YFLT+VD ++R +W 
Sbjct: 534 CPVCPLAKQTRLTFPVSTTRTSMMFDVVHMDLWGPYKTPTLNRKHYFLTIVDDYSRFVWV 593

Query: 222 PHI--L*KQCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENGILHYT 395
            H+  L  +   +++NF      + Q  S    +R        +      FN  GILH +
Sbjct: 594 -HLLQLKSETIVAIKNF--FSMINTQFNSHVKVVRSDNGTEFLNSQCKDLFNHLGILHQS 650

Query: 396 TVPHTPQQNRIVKRKHKHLLEVFRSLLFQSN 488
           + PHTPQQN +V+RKH+H+L + R++ FQ++
Sbjct: 651 SCPHTPQQNGVVERKHRHILNIARAIRFQAH 681



 Score = 76.3 bits (186), Expect(3) = 5e-41
 Identities = 39/84 (46%), Positives = 51/84 (60%)
 Frame = +2

Query: 497 KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
           ++WG CI  A YL+NR+PS    N+S+ E L  K PS  HL   GCLCYAT   P  DKF
Sbjct: 685 RFWGYCIRAAVYLMNRLPSSANSNKSAYELLYCKQPSLFHLKVIGCLCYAT-TVPKGDKF 743

Query: 677 *SRSIPVVFLGYPSGKKAYKLLNL 748
            +R+   + LGY   +K Y LL++
Sbjct: 744 SARASAAILLGYSELQKGYVLLDI 767



 Score = 24.3 bits (51), Expect(3) = 5e-41
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 739 LKSYSIFFSRDVAFREHIFPY 801
           + S  +  +RDV F E IFP+
Sbjct: 767 IHSTKVHVNRDVVFHEEIFPF 787



 Score = 68.6 bits (166), Expect = 6e-09
 Identities = 31/83 (37%), Positives = 52/83 (62%)
 Frame = +3

Query: 1152 EPQFY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSSIE 1331
            EP+ +     +  W +AM +E + L+ N TW +V +     ++  KWIYK+K   +  IE
Sbjct: 923  EPKNFKQASQDERWIQAMKQEIKALEENNTWQVVELPEGMHAVGSKWIYKVKYKANGEIE 982

Query: 1332 KYKARLVIRGNAKKEGIDYTETF 1400
            ++KARLV +G +++EG+DY +TF
Sbjct: 983  RFKARLVAKGYSQQEGLDYHDTF 1005


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score =  102 bits (253), Expect(2) = 7e-41
 Identities = 55/156 (35%), Positives = 86/156 (55%)
 Frame = +3

Query: 21  VHKTIFFCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDG 200
           V  T   C + P+AKQ+R ++      ++ PF L+H+D WGP+  ++ + F+YFLTLVD 
Sbjct: 525 VSSTASHCRISPLAKQKRLAYVSHNNLASSPFDLIHLDIWGPFSIESVDGFRYFLTLVDD 584

Query: 201 HTRVIWTPHIL*KQCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENG 380
            TR  W   +  K    ++    +           N +I+      ++ +  T F  E G
Sbjct: 585 CTRTTWVYMMKNKSEVSNIFPVFV----KLIFTQYNAKIKAIRSDNVKELAFTKFVKEQG 640

Query: 381 ILHYTTVPHTPQQNRIVKRKHKHLLEVFRSLLFQSN 488
           ++H  +  +TPQQN +V+RKH+HLL + RSLLFQSN
Sbjct: 641 MIHQFSCAYTPQQNSVVERKHQHLLNIARSLLFQSN 676



 Score = 94.0 bits (232), Expect(2) = 7e-41
 Identities = 46/84 (54%), Positives = 59/84 (70%)
 Frame = +2

Query: 497 KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
           +YW +C+LTA YLINR+PS +L N++  E LL K+P Y  L S  CLCYA+     R+KF
Sbjct: 680 QYWSDCVLTAAYLINRLPSPLLDNKTPFELLLKKIPDYTLLKS--CLCYASTNVHDRNKF 737

Query: 677 *SRSIPVVFLGYPSGKKAYKLLNL 748
             R+ P VFLGYPSG K YK+L+L
Sbjct: 738 SPRARPCVFLGYPSGYKGYKVLDL 761



 Score = 72.0 bits (175), Expect = 6e-10
 Identities = 34/83 (40%), Positives = 50/83 (60%)
 Frame = +3

Query: 1152 EPQFY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSSIE 1331
            EP+ +   + +  W  A  +E   L+ N+TW +  +   K  + CKW++ IK   D SIE
Sbjct: 938  EPKAFTQAMKSEKWTRAANEELHALEQNKTWIVESLTEGKNVVGCKWVFTIKYNPDGSIE 997

Query: 1332 KYKARLVIRGNAKKEGIDYTETF 1400
            +YKARLV +G  ++EGIDY ETF
Sbjct: 998  RYKARLVAQGFTQQEGIDYMETF 1020


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
            gi|7268152|emb|CAB78488.1| retrovirus-related like
            polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score = 91.3 bits (225), Expect(3) = 8e-41
 Identities = 42/84 (50%), Positives = 57/84 (67%)
 Frame = +2

Query: 497  KYWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF 676
            +YW +C+ TA +LINR+PS +L N+S  E +L K P Y+ L +FGCLC+ +     R KF
Sbjct: 757  QYWSDCVTTAVFLINRLPSPLLNNKSPYELILNKQPDYSLLKNFGCLCFVSTNAHERTKF 816

Query: 677  *SRSIPVVFLGYPSGKKAYKLLNL 748
              R+   VFLGYPSG K YK+L+L
Sbjct: 817  TPRARACVFLGYPSGYKGYKVLDL 840



 Score = 90.5 bits (223), Expect(3) = 8e-41
 Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
 Frame = +3

Query: 111 PF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHTRVIWTPHIL*KQCFESVENFCLHGPNSF 290
           PF LVH+D WGP+  ++   F+YFLT+VD  TR  W   +  K+   SV       P   
Sbjct: 632 PFDLVHLDIWGPFSIESIEGFRYFLTVVDDCTRTTWVYMLRNKKDVSSVF------PEFI 685

Query: 291 QLQSLNF--QIRQCT*IRLQSVLSTVFFNENGILHYTTVPHTPQQNRIVKRKHKHLLEVF 464
           +L S  F  +I+         +  T    E+G+LH+ +  +TPQQN +V+RKH+H+L V 
Sbjct: 686 KLVSTQFNAKIKAIRSDNAPELGFTEIVKEHGMLHHFSCAYTPQQNSVVERKHQHILNVA 745

Query: 465 RSLLFQSN 488
           R+LLFQSN
Sbjct: 746 RALLFQSN 753



 Score = 34.7 bits (78), Expect(3) = 8e-41
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 8/49 (16%)
 Frame = +1

Query: 739 LKSYSIFFSRDVAFREHIFPYHSSTPI-------PTSFFPL-IPTPFVD 861
           L+S+S+  SR+V F+EH+FP+ +S  +       P S  PL  P  FV+
Sbjct: 840 LESHSVTVSRNVVFKEHVFPFKTSELLNKAVDMFPNSILPLPAPLHFVE 888



 Score = 68.6 bits (166), Expect = 6e-09
 Identities = 29/83 (34%), Positives = 51/83 (61%)
 Frame = +3

Query: 1152 EPQFY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSSIE 1331
            EP+ +   + +  W    ++E Q ++ N+TW +  +   K  + CKW++ IK   D ++E
Sbjct: 1022 EPKTFSQAMKSEKWIRVAVEELQAMELNKTWSVESLPPDKNVVGCKWVFTIKYNPDGTVE 1081

Query: 1332 KYKARLVIRGNAKKEGIDYTETF 1400
            +YKARLV +G  ++EGID+ +TF
Sbjct: 1082 RYKARLVAQGFTQQEGIDFLDTF 1104


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  106 bits (265), Expect(2) = 2e-40
 Identities = 58/149 (38%), Positives = 83/149 (55%)
 Frame = +3

Query: 42  CPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHTRVIWT 221
           C +CP+AK  R+ FP+S   S   F L+H+D WG YH  + +  +YFLT+VD H+R  W 
Sbjct: 561 CSICPLAKHTRTPFPLSVSSSDSCFDLIHVDIWGGYHVPSLSGAQYFLTIVDDHSRSTWV 620

Query: 222 PHIL*KQCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENGILHYTTV 401
             +  K       +  +H  N    Q    Q++            T F++  GILH T+ 
Sbjct: 621 YLMHHK---SEARSLLVHFVNLVANQ-FGSQVKIVRSDNGPEFKHTQFYSSRGILHQTSC 676

Query: 402 PHTPQQNRIVKRKHKHLLEVFRSLLFQSN 488
            +TPQQN +V+RKH+HLL V R+LLFQS+
Sbjct: 677 INTPQQNGVVERKHRHLLNVARALLFQSH 705



 Score = 88.2 bits (217), Expect(2) = 2e-40
 Identities = 41/83 (49%), Positives = 55/83 (66%)
 Frame = +2

Query: 500 YWGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF* 679
           +WG+ ILTA YLINR P+ +LQ ++  EKL  K P+Y+HL  FGC C+ +       KF 
Sbjct: 710 FWGDAILTAAYLINRTPTPLLQGKTPFEKLFHKSPNYSHLRVFGCRCFVSTHPLRPSKFD 769

Query: 680 SRSIPVVFLGYPSGKKAYKLLNL 748
            RSI  VF+GYP G+K YK+ +L
Sbjct: 770 PRSIESVFIGYPHGQKGYKVYSL 792



 Score =  108 bits (271), Expect = 4e-21
 Identities = 63/151 (41%), Positives = 82/151 (54%), Gaps = 27/151 (17%)
 Frame = +3

Query: 1029 RKSSRVPHRPSHLNDFIYNFVFPSPPVSDKS--------------------------KVF 1130
            R+SSR    P+ L DF      PS PV   S                          K F
Sbjct: 900  RRSSRPTKTPTTLQDFHIEAALPSRPVPPSSTSEVAHSGTIHSLSQVLSYDRLSPMHKAF 959

Query: 1131 TVEIHM-HEPQFY*HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIK 1307
            TV+I +  EP+ +   V++  W+EAM  E Q L+AN+TW +VP+  HKK I CKW+YKIK
Sbjct: 960  TVKITLAKEPRSFSQAVLDSRWREAMNTEIQALQANKTWSLVPLPSHKKPIGCKWVYKIK 1019

Query: 1308 QTFDSSIEKYKARLVIRGNAKKEGIDYTETF 1400
               D +IE+YKARLV +G ++ EGIDY ETF
Sbjct: 1020 YNPDGTIERYKARLVAKGFSQVEGIDYRETF 1050


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  102 bits (254), Expect(2) = 2e-40
 Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
 Frame = +3

Query: 39   FCPVCPMAKQQRSSFPISFIHSTVPF*LVHIDTWGPYHTKTYNNFKYFLTLVDGHTRVIW 218
            FC VC +AKQ++ SFP S       F L+HID WGP+  +T   +KYFLT+VD H+R  W
Sbjct: 589  FCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATW 648

Query: 219  TPHIL*K-QCFESVENFCLHGPNSFQLQSLNFQIRQCT*IRLQSVLSTVFFNENGILHYT 395
               +  K +       F     N +++     +++         +  T F+ E GI+ + 
Sbjct: 649  MYLLKTKSEVLTVFPAFIQQVENQYKV-----KVKAVRSDNAPELKFTSFYAEKGIVSFH 703

Query: 396  TVPHTPQQNRIVKRKHKHLLEVFRSLLFQS 485
            + P TP+QN +V+RKH+H+L V R+L+FQS
Sbjct: 704  SCPETPEQNSVVERKHQHILNVARALMFQS 733



 Score = 92.4 bits (228), Expect(2) = 2e-40
 Identities = 43/82 (52%), Positives = 55/82 (67%)
 Frame = +2

Query: 503 WGECILTATYLINRIPSIVLQNQSSIEKLLGKVPSYNHLNSFGCLCYATFPKPGRDKF*S 682
           WG+C+LTA +LINR PS +L N++  E L G  P Y  L +FGCLCY++     R KF  
Sbjct: 740 WGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQP 799

Query: 683 RSIPVVFLGYPSGKKAYKLLNL 748
           RS   +FLGYPSG K YKL++L
Sbjct: 800 RSRACLFLGYPSGYKGYKLMDL 821



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
 Frame = +3

Query: 1023 PTRKSSRVPHRPSHLNDFIYNFV-----FPSPPVSDKSKVFTVEI-------HMHEPQFY 1166
            P   S RV   P+HLND+  N +     +P       SK+    +        +  P  Y
Sbjct: 884  PQISSQRVRKPPAHLNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNY 943

Query: 1167 *HVVINLTWQEAMLKEFQDLKANQTWDIVPILFHKKSIPCKWIYKIKQTFDSSIEKYKAR 1346
                    W EA+  E   ++   TW+I  +   KK++ CKW++ +K   D ++E+YKAR
Sbjct: 944  AEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKAR 1003

Query: 1347 LVIRGNAKKEGIDYTETF 1400
            LV +G  +KEG+DYT+TF
Sbjct: 1004 LVAKGYTQKEGLDYTDTF 1021